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Oryza sativa
cluster # 9718 cluster # 9718       Sequences # 6       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9718#0 length = 2616 sequences # 3  
 consensus_9718#1 length = 887 sequences # 1  
consensus_9718#2 length = 595 sequences # 2  
consensusID : consensus_9718#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2616
fasta sequence 
                              [CCAATTCCCAAACCCTAGCCGCCGGCGGCCGCACCACACATCCCCGACCCACCGCCGTTGCCGCAGCCGCAGCTCGATCGCGAGCGAGAGGGGCTAGCGGAAACCCCAGCAGCGTGAGGGCTAAGCTTCGCGGCGGATTGGAGATGACGCAGAAGCAGAGCCAGTTCAAGGGGCAGGGGAAGAAGAAGACCATCCCTCCCAACCGCCATGGCAAGGCGCCCCACGTCCGCAAAGGGAAGAGGGCCGTGAAGCCGACCAAGTTCACCAAGGACATGGACGCCGATAAGGTAGACTCGGTTTACTGAATGCTTGCTCTATTCATCAATCAGCACCTGCTTTCTCCCTTTCGGACATAAGATGTTATTTGGGGCAGCATTTGGAGATTGGGGGTCTAGCCTTCTCTGAGCTCTGAAGTAGGCAAGAAACAAACATGAATTAAACTAGTGATACATGCAAACCAAATATGTTCTGTTTTTGAGTGATATAAGATGGAAAGTTGTGTGTTCGTTAATGTGCTCCAAAATAACATAGCAATATTCTTTTACTACTCCAAAAGAGAGTTACATGCCTATTGATTACGGATTCTCTACTAGTACCAATAAGATCAAAGTTAATGATTTTGTCGGAACTAATATCCAGTGATAGTTCTTTTCAACATAGGTTACATATGTAGTAATATGTTTCTTCATAAGTTGAGGAGCCATGGAAATAATAATTGAGAGGTGTATGGACATATGGTTAGTATGGTTAGAGGGGTAAAGGTAAAGGCTAAATTGCTTTGATTAGCAGCTGGGATTTGTCTTTTAGCGCCTGATTTGTGTTGCATTTCAATATGGGTGCCCATATTAGGCTAATACATGTAAATCTCATGTGGTTGACTTCAACATTGTTCTGGTGAGGCCCTTTTAGGGTAACTGGGTGCTGAGGTCATGCTCCATGATTCATGGCCTATGGCTGGGAACTGTACAAAATGCAAAAACTGATGTTAATATTACCGTATAAATATATGAATTTATGATAAGTTTGACTCCAGAGGCAATTGCAGAGAGAGTCCGACAGCATTGCTGATTTTTTGGCTGGCTGTTGCTGAATATGTCCGCTAATGCCATTACTGTCGTTCCATTTACAGTGGTTGATCTGTTTGTATTGGTTGTTTGGGTGCTTGCCAATCATCTACCGTATGTTAAACCTAGGGATGGATTTAAAATCTATTTTTACTGGTTGACAGACACAGCATCAGTATTCAGTAGTCCTATAGATATGCCAAGCTGTAGTTTAATCCATGGTTTTTCTGCCAGTACTTGCAATGATAGGTCTGTTTAGTATGATATTAACAGTTTTCTATGGCTCGGTAATATGGTAACTAAACTGGCATAGCTGTAGCCTGTAGTCAACATGTTATGGCCATTGATAAGTTACATCATACTTGGGACTACGATACATTCTTTGTAGACTATAGTTTTCTAGCTCGGTATGTTTTTGTAATATTCCGAATTGTGAGGGATGCTGCCTCAGTTTTCTATTCCACTTTCTTGTTATAACAAGATTGGTAACTCAATTGCATGACCGTGTAGTTGTTGTTGATGTTCTACGGTTTGATCTGAAAAACCAGTTTTACATTGCTTCTTGTTGTATTTTGATTTACAGGATAAGTTGTGTTTGTGAACTATGTAGATGTTTGGGAAATATTTGGCAATGTTTTACCTTGACTTGCGGTGTGGTTTTTGCACGGGCAATCGTGTCCGAAGTTATCGAGGATCAAATTTTATTAGACTATTTTGGTGTTGCAGATTTCAGTAGGTTTGGCATTCTCTATGATACTAATAAACGACCACTTTTGGCGCCATGTCTGTTTGTCAAATGGTGACATTAGAGTTTGGAATAATTGAAAGCAGACTAGACCTTCTGATCTTATTGTTATTAACTTTGTGATTACGTTTTTTTCTTATTTGAGATATTTAAGATATTTAGTAACCAGTGAACTCATTTGATGTTCTCTTCTTCCCAGGAACTCACAAAATTCATCAACCAGTGCAACGAGAAGAAGGCTGCAAGTCTTGCCAGCAAAGAAGGCGGCGACCTCAGTATACTCAAGGCGGACGTTGATCCCTCCAATTCAAACTAGGAATCTGTGGCTACCTCTGCCTACGGCTATGTGCTATAGAAGATGAGTGTGTGGAATGGATATTATGTTACATTGCATACTTGCATTCTAGTATTTCCCTGCAGAAATGTAGTAATTCTGTATTTCTCTGAAGAAGGTTATGCTTACTGCTAAATGTTTACAATCAATCAACGGTTAATACTGTAAAGTTCTCTTCTCATACATACAAATAATTAAGGCGAAAGCAATAGACCCATGCGACGTACGCGAGGCACACGCACGGGTTTCGCCACGCGCCGTACAACTCCGAAGATGCAAGTAGTGAAGATGCATCCTGTGAGCAATGGTCAGGCTTGTAGAGTTGCATATACCATTTGGGGCTTTTGGGATGCGTGTGTGCGAGAGAGATAATAGCATATGTTTATTGAGAAGTAAGAGATGGTCGAACATGTGAATGGACGTGCTCCAGACCCACGATTTAAGTCAAAGGGCTTAAATTCAAAAAAAAAAAA]

[+] EMBL AK100277             [CCAATTCCCAAACCCTAGCCGCCGGCGGCCGCACCACACATCCCCGACCCACCGCCGTTGCCGCAGCCGCAGCTCGATCGCGAGCGAGAGGGGCTAGCGGAAACCCCAGCAGCGTGAGGGCTAAGCTTCGCGGCGGATTGGAGATGACGCAGAAGCAGAGCCAGTTCAAGGGGCAGGGGAAGAAGAAGACCATCCCTCCCAACCGCCATGGCAAGGCGCCCCACGTCCGCAAAGGGAAGAGGGCCGTGAAGCCGACCAAGTTCACCAAGGACATGGACGCCGATAAGGTAGACTCGGTTTACTGAATGCTTGCTCTATTCATCAATCAGCACCTGCTTTCTCCCTTTCGGACATAAGATGTTATTTGGGGCAGCATTTGGAGATTGGGGGTCTAGCCTTCTCTGAGCTCTGAAGTAGGCAAGAAACAAACATGAATTAAACTAGTGATACATGCAAACCAAATATGTTCTGTTTTTGAGTGATATAAGATGGAAAGTTGTGTGTTCGTTAATGTGCTCCAAAATAACATAGCAATATTCTTTTACTACTCCAAAAGAGAGTTACATGCCTATTGATTACGGATTCTCTACTAGTACCAATAAGATCAAAGTTAATGATTTTGTCGGAACTAATATCCAGTGATAGTTCTTTTCAACATAGGTTACATATGTAGTAATATGTTTCTTCATAAGTTGAGGAGCCATGGAAATAATAATTGAGAGGTGTATGGACATATGGTTAGTATGGTTAGAGGGGTAAAGGTAAAGGCTAAATTGCTTTGATTAGCAGCTGGGATTTGTCTTTTAGCGCCTGATTTGTGTTGCATTTCAATATGGGTGCCCATATTAGGCTAATACATGTAAATCTCATGTGGTTGACTTCAACATTGTTCTGGTGAGGCCCTTTTAGGGTAACTGGGTGCTGAGGTCATGCTCCATGATTCATGGCCTATGGCTGGGAACTGTACAAAATGCAAAAACTGATGTTAATATTACCGTATAAATATATGAATTTATGATAAGTTTGACTCCAGAGGCAATTGCAGAGAGAGTCCGACAGCATTGCTGATTTTTTGGCTGGCTGTTGCTGAATATGTCCGCTAATGCCATTACTGTCGTTCCATTTACAGTGGTTGATCTGTTTGTATTGGTTGTTTGGGTGCTTGCCAATCATCTACCGTATGTTAAACCTAGGGATGGATTTAAAATCTATTTTTACTGGTTGACAGACACAGCATCAGTATTCAGTAGTCCTATAGATATGCCAAGCTGTAGTTTAATCCATGGTTTTTCTGCCAGTACTTGCAATGATAGGTCTGTTTAGTATGATATTAACAGTTTTCTATGGCTCGGTAATATGGTAACTAAACTGGCATAGCTGTAGCCTGTAGTCAACATGTTATGGCCATTGATAAGTTACATCATACTTGGGACTACGATACATTCTTTGTAGACTATAGTTTTCTAGCTCGGTATGTTTTTGTAATATTCCGAATTGTGAGGGATGCTGCCTCAGTTTTCTATTCCACTTTCTTGTTATAACAAGATTGGTAACTCAATTGCATGACCGTGTAGTTGTTGTTGATGTTCTACGGTTTGATCTGAAAAACCAGTTTTACATTGCTTCTTGTTGTATTTTGATTTACAGGATAAGTTGTGTTTGTGAACTATGTAGATGTTTGGGAAATATTTGGCAATGTTTTACCTTGACTTGCGGTGTGGTTTTTGCACGGGCAATCGTGTCCGAAGTTATCGAGGATCAAATTTTATTAGACTATTTTGGTGTTGCAGATTTCAGTAGGTTTGGCATTCTCTATGATACTAATAAACGACCACTTTTGGCGCCATGTCTGTTTGTCAAATGGTGACATTAGAGTTTGGAATAATTGAAAGCAGACTAGACCTTCTGATCTTATTGTTATTAACTTTGTGATTACGTTTTTTTCTTATTTGAGATATTTAAGATATTTAGTAACCAGTGAACTCATTTGATGTTCTCTTCTTCCCAGGAACTCACAAAATTCATCAACCAGTGCAACGAGAAGAAGGCTGCAAGTCTTGCCAGCAAAGAAGGCGGCGACCTCAGTATACTCAAGGCGGACGTTGATCCCTCCAATTCAAACTAGGAATCTGTGGCTACCTCTGCCTACGGCTATGTGCTATAGAAGATGAGTGTGTGGAATGGATATTATGTTACATTGCATACTTGCATTCTAGTATTTCCCTGCAGAAATGTAGTAATTCTGTATTTCTCTGAAGAAGGTTATGCTTACTGCTAAATGTTTACAATCAATCAACGGTTAATACTGTAAAGTTCTCTTCTCATACATACAA                                                                                                                                                                                                                                                                                           ]
[-] EMBL CF310422             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CTCCAATTCAAACTAGGAATCTGTGGCTACCTCTGCCTACGGCTATGTGCTATAGAAGATGAGTGTGTGGAATGGATATTATGTTACATTGCATACTTGCATTCTAGTATTTCCCTGCAGAAATGTAGTAATTCTGTATTTCTCTGAAGAAGGTTATGCTTACTGCTAAATGTTTACAATCAATCAACGGTTAATACTGTAAAGTTCTCTTCTCATACATACAAATAATTAAGGCGAAAGCAATAGACCCATGCGACGTACGCGAGGCACACGCACGGGTTTCGCCACGCGCCGTACAACTCCGAAGATGCAAGTAGTGAAGATGCATCCTGTGAGCAATGGTCAGGCTTGTAGAGTTGCATATACCATTTGGGGCTTTTGGGATGCGTGTGTGCGAGAGAGATAATAGCATATGTTTATTGAGAAGTAAGAGATGGTCGAACATGTGAATGGACGTGCTCCAGACCCACGATTTAAGTCAAAGGGCTTAAATTCAAAAAAAAAAAA]
[+] EMBL CB683161             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               tccaccttAACTAGGAATCTGTGGCTACCTCTGCCTACGGCTATGTGCTATAGAAGATGAGTGTGTGGAATGGATATCATGTTACATTGCATACTTGCATTCTAGTATTTCCCTGCAGAAATGTAGTAATTCTGTATTTCTCTGAAGAAGGTTATGCTTACTGCTAAATGTTTACAATCAATCAACGGTTAATACTGTAAAGTTCTCTTCTCATACATACAAATAATTAAGG                                                                                                                                                                                                                                                                                 ]




>consensus_9718#0
CCAATTCCCAAACCCTAGCCGCCGGCGGCCGCACCACACATCCCCGACCCACCGCCGTTG
CCGCAGCCGCAGCTCGATCGCGAGCGAGAGGGGCTAGCGGAAACCCCAGCAGCGTGAGGG
CTAAGCTTCGCGGCGGATTGGAGATGACGCAGAAGCAGAGCCAGTTCAAGGGGCAGGGGA
AGAAGAAGACCATCCCTCCCAACCGCCATGGCAAGGCGCCCCACGTCCGCAAAGGGAAGA
GGGCCGTGAAGCCGACCAAGTTCACCAAGGACATGGACGCCGATAAGGTAGACTCGGTTT
ACTGAATGCTTGCTCTATTCATCAATCAGCACCTGCTTTCTCCCTTTCGGACATAAGATG
TTATTTGGGGCAGCATTTGGAGATTGGGGGTCTAGCCTTCTCTGAGCTCTGAAGTAGGCA
AGAAACAAACATGAATTAAACTAGTGATACATGCAAACCAAATATGTTCTGTTTTTGAGT
GATATAAGATGGAAAGTTGTGTGTTCGTTAATGTGCTCCAAAATAACATAGCAATATTCT
TTTACTACTCCAAAAGAGAGTTACATGCCTATTGATTACGGATTCTCTACTAGTACCAAT
AAGATCAAAGTTAATGATTTTGTCGGAACTAATATCCAGTGATAGTTCTTTTCAACATAG
GTTACATATGTAGTAATATGTTTCTTCATAAGTTGAGGAGCCATGGAAATAATAATTGAG
AGGTGTATGGACATATGGTTAGTATGGTTAGAGGGGTAAAGGTAAAGGCTAAATTGCTTT
GATTAGCAGCTGGGATTTGTCTTTTAGCGCCTGATTTGTGTTGCATTTCAATATGGGTGC
CCATATTAGGCTAATACATGTAAATCTCATGTGGTTGACTTCAACATTGTTCTGGTGAGG
CCCTTTTAGGGTAACTGGGTGCTGAGGTCATGCTCCATGATTCATGGCCTATGGCTGGGA
ACTGTACAAAATGCAAAAACTGATGTTAATATTACCGTATAAATATATGAATTTATGATA
AGTTTGACTCCAGAGGCAATTGCAGAGAGAGTCCGACAGCATTGCTGATTTTTTGGCTGG
CTGTTGCTGAATATGTCCGCTAATGCCATTACTGTCGTTCCATTTACAGTGGTTGATCTG
TTTGTATTGGTTGTTTGGGTGCTTGCCAATCATCTACCGTATGTTAAACCTAGGGATGGA
TTTAAAATCTATTTTTACTGGTTGACAGACACAGCATCAGTATTCAGTAGTCCTATAGAT
ATGCCAAGCTGTAGTTTAATCCATGGTTTTTCTGCCAGTACTTGCAATGATAGGTCTGTT
TAGTATGATATTAACAGTTTTCTATGGCTCGGTAATATGGTAACTAAACTGGCATAGCTG
TAGCCTGTAGTCAACATGTTATGGCCATTGATAAGTTACATCATACTTGGGACTACGATA
CATTCTTTGTAGACTATAGTTTTCTAGCTCGGTATGTTTTTGTAATATTCCGAATTGTGA
GGGATGCTGCCTCAGTTTTCTATTCCACTTTCTTGTTATAACAAGATTGGTAACTCAATT
GCATGACCGTGTAGTTGTTGTTGATGTTCTACGGTTTGATCTGAAAAACCAGTTTTACAT
TGCTTCTTGTTGTATTTTGATTTACAGGATAAGTTGTGTTTGTGAACTATGTAGATGTTT
GGGAAATATTTGGCAATGTTTTACCTTGACTTGCGGTGTGGTTTTTGCACGGGCAATCGT
GTCCGAAGTTATCGAGGATCAAATTTTATTAGACTATTTTGGTGTTGCAGATTTCAGTAG
GTTTGGCATTCTCTATGATACTAATAAACGACCACTTTTGGCGCCATGTCTGTTTGTCAA
ATGGTGACATTAGAGTTTGGAATAATTGAAAGCAGACTAGACCTTCTGATCTTATTGTTA
TTAACTTTGTGATTACGTTTTTTTCTTATTTGAGATATTTAAGATATTTAGTAACCAGTG
AACTCATTTGATGTTCTCTTCTTCCCAGGAACTCACAAAATTCATCAACCAGTGCAACGA
GAAGAAGGCTGCAAGTCTTGCCAGCAAAGAAGGCGGCGACCTCAGTATACTCAAGGCGGA
CGTTGATCCCTCCAATTCAAACTAGGAATCTGTGGCTACCTCTGCCTACGGCTATGTGCT
ATAGAAGATGAGTGTGTGGAATGGATATTATGTTACATTGCATACTTGCATTCTAGTATT
TCCCTGCAGAAATGTAGTAATTCTGTATTTCTCTGAAGAAGGTTATGCTTACTGCTAAAT
GTTTACAATCAATCAACGGTTAATACTGTAAAGTTCTCTTCTCATACATACAAATAATTA
AGGCGAAAGCAATAGACCCATGCGACGTACGCGAGGCACACGCACGGGTTTCGCCACGCG
CCGTACAACTCCGAAGATGCAAGTAGTGAAGATGCATCCTGTGAGCAATGGTCAGGCTTG
TAGAGTTGCATATACCATTTGGGGCTTTTGGGATGCGTGTGTGCGAGAGAGATAATAGCA
TATGTTTATTGAGAAGTAAGAGATGGTCGAACATGTGAATGGACGTGCTCCAGACCCACG
ATTTAAGTCAAAGGGCTTAAATTCAAAAAAAAAAAA

consensusID : consensus_9718#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 887
fasta sequence 
                              [CAGCAGCGTGAGGGCTAAGCTTCGCGGCGGATTGGAGATGACGCAGAAGCAGAGCCAGTTCAAGGGGCAGGGAAAGAAGAAGACCATCCCTCCCAACCGCCATGGCAAGGCGCCCCACGTCCGCAAAGGGAAGAGGGCCGTGAAGCCGACCAAGTTCACCAAGGACATGGACGCCGATAAGGAACTGTGAATATCGATCCCTCCGTCCTCTCTATGTAACGATTCTCTCATTTCCCCCCTCCCACCGCCAAAGTAATTGCCTTTTTCGTTAACATTATATACTCTGACATCATCTCCCTTTTATTTTTTCTCGTCTCCTCGTTTTCCCCTCCCTCTCGCTCCCTTGTTAGATACCTGCCGCAGCTCCGCCTCTCTCCACTTATCTTTCCCCCCGCCGTTCCTCTTAACAACTTTTTATCTCCCCCTCACGTCCCGAACTTCTTTATCGTACATCCCCCCCTCTCCTTCTTTATCCCGCTCCTTGTCGCACGCCGCCTTCTTTACTCTCTCCCTGCTCGTGAGCTGCCNTCCCGTTGTCCCCTCACCTCCCGCCCTTATTATTTACGCTCGTTCCCCCCTTTTCCTTCACCCACATTCACCTCCGCCACTGTCCTATTGATTCGCCCCGTCGCCCCCCTCGGTATTCTCCCTATCCCCATCTCCCTTCTACTTCTACATATTCTAATCTCGCTCCTCCCCGCCTCTCCCACTTTTCACCCCTGTCCGGCCTCATCGCCCTCCCCCCTCACTTTGTGCGCCCCATTTTCCCCATGCGCTGCCCCCCCTTTTTCATCCCACTATCTTTTTTTCCCACTCGCTCCCCACATTAGTTAACTCCATCATTAGAACTCATACTCCGCGCGTACTGCCGCCATGGATGTTACCAA]

[+] EMBL CA756926             [CAGCAGCGTGAGGGCTAAGCTTCGCGGCGGATTGGAGATGACGCAGAAGCAGAGCCAGTTCAAGGGGCAGGGAAAGAAGAAGACCATCCCTCCCAACCGCCATGGCAAGGCGCCCCACGTCCGCAAAGGGAAGAGGGCCGTGAAGCCGACCAAGTTCACCAAGGACATGGACGCCGATAAGGAACTGTGAATATCGATCCCTCCGTCCTCTCTATGTAACGATTCTCTCATTTCCCCCCTCCCACCGCCAAAGTAATTGCCTTTTTCGTTAACATTATATACTCTGACATCATCTCCCTTTTATTTTTTCTCGTCTCCTCGTTTTCCCCTCCCTCTCGCTCCCTTGTTAGATACCTGCCGCAGCTCCGCCTCTCTCCACTTATCTTTCCCCCCGCCGTTCCTCTTAACAACTTTTTATCTCCCCCTCACGTCCCGAACTTCTTTATCGTACATCCCCCCCTCTCCTTCTTTATCCCGCTCCTTGTCGCACGCCGCCTTCTTTACTCTCTCCCTGCTCGTGAGCTGCCNTCCCGTTGTCCCCTCACCTCCCGCCCTTATTATTTACGCTCGTTCCCCCCTTTTCCTTCACCCACATTCACCTCCGCCACTGTCCTATTGATTCGCCCCGTCGCCCCCCTCGGTATTCTCCCTATCCCCATCTCCCTTCTACTTCTACATATTCTAATCTCGCTCCTCCCCGCCTCTCCCACTTTTCACCCCTGTCCGGCCTCATCGCCCTCCCCCCTCACTTTGTGCGCCCCATTTTCCCCATGCGCTGCCCCCCCTTTTTCATCCCACTATCTTTTTTTCCCACTCGCTCCCCACATTAGTTAACTCCATCATTAGAACTCATACTCCGCGCGTACTGCCGCCATGGATGTTACCAA]




>consensus_9718#1
CAGCAGCGTGAGGGCTAAGCTTCGCGGCGGATTGGAGATGACGCAGAAGCAGAGCCAGTT
CAAGGGGCAGGGAAAGAAGAAGACCATCCCTCCCAACCGCCATGGCAAGGCGCCCCACGT
CCGCAAAGGGAAGAGGGCCGTGAAGCCGACCAAGTTCACCAAGGACATGGACGCCGATAA
GGAACTGTGAATATCGATCCCTCCGTCCTCTCTATGTAACGATTCTCTCATTTCCCCCCT
CCCACCGCCAAAGTAATTGCCTTTTTCGTTAACATTATATACTCTGACATCATCTCCCTT
TTATTTTTTCTCGTCTCCTCGTTTTCCCCTCCCTCTCGCTCCCTTGTTAGATACCTGCCG
CAGCTCCGCCTCTCTCCACTTATCTTTCCCCCCGCCGTTCCTCTTAACAACTTTTTATCT
CCCCCTCACGTCCCGAACTTCTTTATCGTACATCCCCCCCTCTCCTTCTTTATCCCGCTC
CTTGTCGCACGCCGCCTTCTTTACTCTCTCCCTGCTCGTGAGCTGCCNTCCCGTTGTCCC
CTCACCTCCCGCCCTTATTATTTACGCTCGTTCCCCCCTTTTCCTTCACCCACATTCACC
TCCGCCACTGTCCTATTGATTCGCCCCGTCGCCCCCCTCGGTATTCTCCCTATCCCCATC
TCCCTTCTACTTCTACATATTCTAATCTCGCTCCTCCCCGCCTCTCCCACTTTTCACCCC
TGTCCGGCCTCATCGCCCTCCCCCCTCACTTTGTGCGCCCCATTTTCCCCATGCGCTGCC
CCCCCTTTTTCATCCCACTATCTTTTTTTCCCACTCGCTCCCCACATTAGTTAACTCCAT
CATTAGAACTCATACTCCGCGCGTACTGCCGCCATGGATGTTACCAA

consensusID : consensus_9718#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 595
fasta sequence 
                              [CACGGCGTCGCCACCGCCACACCACACATCCCCGACCCACCGCCGGTTCCCACCCAGCTCGATCGCGAGCGAGAGGGGCTACGGAAACCCCAGCAGCGTGAGGGCTAAGCTTCGCGGCAGGATTGGAGATGACGCAGAAGCAGAGCCAGTTCAAGGGGCAGGGAAAGAAGAAGACCATCCCTCCCAACCAGCCATGGCAAGGCAGCACCCACAGTCACAGCAAAGGGAAGAGGGCCGTGAAGCCGACCAAGTTCAACCAATGGACATGGACAGCCAGATAAGGAACTCAACAAAAATTCATCAAACCAAGTGCAACGAGAAGAAGGCTGCAAGTCTTGCCAGCAAAGAAGGCGGCGACCTCAGTATACTCAAGGCGGACGTTGATCCCTCCAATTCAAACTAGGAATCTGTGGCTACCTCTGCCTACGGCTATGTGCTATAGAAGATGAGTGTGTGGAATGGATATTATGTTACATTGCATACTTGCATTCTAGTATTTCCCTGCAGAAATGTAGTAATTCTGTATTTCTCTGAAGAAGTTTATGCTTACGGCTAAATGTTTACATGCTGCTATATTTACAATCAATCAACGNGT]

[+] EMBL BI798931             [CACGGCGTCGCCACCGCCACACCACACATCCCCGACCCACCGCCGGTTCCCACCCAGCTCGATCGCGAGCGAGAGGGGCTACGGAAACCCCAGCAGCGTGAGGGCTAAGCTTCGCGGCAGGATTGGAGATGACGCAGAAGCAGAGCCAGTTCAAGGGGCAGGGAAAGAAGAAGACCATCCCTCCCAACCAGCCATGGCAAGGCAGCACCCACAGTCACAGCAAAGGGAAGAGGGCCGTGAAGCCGACCAAGTTCAACCAATGGACATGGACAGCCAGATAAGGAACTCAACAAAAATTCATCAAACCAAGTGCAACGAGAAGAAGGCTGCAAGTCTTGCCAGCAAAGAAGGCGGCGACCTCAGTA                                                                                                                                                                                                                                      ]
[-] EMBL CB965454             [                                                                                                         TAAGCTTCGCGGC GGATTGGAGATGACGCAGAAGCAGAGCCAGTTCAAGGGGCAGGGGAAGAAGAAGACCATCCCTCCCAACC GCCATGGCAAGGC GC CCCAC GTC C GCAAAGGGAAGAGGGCCGTGAAGCCGACCAAGTTC ACCAA GGACATGGAC GCC GATAAGGAACTC AC AAAATTCATC AACC AGTGCAACGAGAAGAAGGCTGCAAGTCTTGCCAGCAAAGAAGGCGGCGACCTCAGTATACTCAAGGCGGACGTTGATCCCTCCAATTCAAACTAGGAATCTGTGGCTACCTCTGCCTACGGCTATGTGCTATAGAAGATGAGTGTGTGGAATGGATATTATGTTACATTGCATACTTGCATTCTAGTATTTCCCTGCAGAAATGTAGTAATTCTGTATTTCTCTGAAGAAGTTTATGCTTACGGCTAAATGTTTACATGCTGCTATATTTACAATCAATCAACGNGT]




>consensus_9718#2
CACGGCGTCGCCACCGCCACACCACACATCCCCGACCCACCGCCGGTTCCCACCCAGCTC
GATCGCGAGCGAGAGGGGCTACGGAAACCCCAGCAGCGTGAGGGCTAAGCTTCGCGGCAG
GATTGGAGATGACGCAGAAGCAGAGCCAGTTCAAGGGGCAGGGAAAGAAGAAGACCATCC
CTCCCAACCAGCCATGGCAAGGCAGCACCCACAGTCACAGCAAAGGGAAGAGGGCCGTGA
AGCCGACCAAGTTCAACCAATGGACATGGACAGCCAGATAAGGAACTCAACAAAAATTCA
TCAAACCAAGTGCAACGAGAAGAAGGCTGCAAGTCTTGCCAGCAAAGAAGGCGGCGACCT
CAGTATACTCAAGGCGGACGTTGATCCCTCCAATTCAAACTAGGAATCTGTGGCTACCTC
TGCCTACGGCTATGTGCTATAGAAGATGAGTGTGTGGAATGGATATTATGTTACATTGCA
TACTTGCATTCTAGTATTTCCCTGCAGAAATGTAGTAATTCTGTATTTCTCTGAAGAAGT
TTATGCTTACGGCTAAATGTTTACATGCTGCTATATTTACAATCAATCAACGNGT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9718#0      CCAATTCCCAAACCCTAGCCGCCGGCGGCCGCACCACACATCCCCGACCCACCGCCGTTG 60
consensus_9718#2      ------------------------------------------------------------
consensus_9718#1      ------------------------------------------------------------
                                                                                  

consensus_9718#0      CCGCAGCCGCAGCTCGATCGCGAGCGAGAGGGGCTAGCGGAAACCCCAGCAGCGTGAGGG 120
consensus_9718#2      ------------------------------------------------------------
consensus_9718#1      ------------------------------------------------------------
                                                                                  

consensus_9718#0      CTAAGCTTCGCGGCGGATTGGAGATGACGCAGAAGCAGAGCCAGTTCAAGGGGCAGGGGA 180
consensus_9718#2      ------------------------------------------------------------
consensus_9718#1      ------------------------------------------------------------
                                                                                  

consensus_9718#0      AGAAGAAGACCATCCCTCCCAACCGCCATGGCAAGGCGCCCCACGTCCGCAAAGGGAAGA 240
consensus_9718#2      ------------------------------------------------------------
consensus_9718#1      ------------------------------------------------------------
                                                                                  

consensus_9718#0      GGGCCGTGAAGCCGACCAAGTTCACCAAGGACATGGACGCCGATAAGGTAGACTCGGTTT 300
consensus_9718#2      ------------------------------------------------------------
consensus_9718#1      ------------------------------------------------------------
                                                                                  

consensus_9718#0      ACTGAATGCTTGCTCTATTCATCAATCAGCACCTGCTTTCTCCCTTTCGGACATAAGATG 360
consensus_9718#2      ------------------------------------------------------------
consensus_9718#1      ------------------------------------------------------------
                                                                                  

consensus_9718#0      TTATTTGGGGCAGCATTTGGAGATTGGGGGTCTAGCCTTCTCTGAGCTCTGAAGTAGGCA 420
consensus_9718#2      ------------------------------------------------------------
consensus_9718#1      ------------------------------------------------------------
                                                                                  

consensus_9718#0      AGAAACAAACATGAATTAAACTAGTGATACATGCAAACCAAATATGTTCTGTTTTTGAGT 480
consensus_9718#2      ------------------------------------------------------------
consensus_9718#1      ------------------------------------------------------------
                                                                                  

consensus_9718#0      GATATAAGATGGAAAGTTGTGTGTTCGTTAATGTGCTCCAAAATAACATAGCAATATTCT 540
consensus_9718#2      ------------------------------------------------------------
consensus_9718#1      ------------------------------------------------------------
                                                                                  

consensus_9718#0      TTTACTACTCCAAAAGAGAGTTACATGCCTATTGATTACGGATTCTCTACTAGTACCAAT 600
consensus_9718#2      ------------------------------------------------------------
consensus_9718#1      ------------------------------------------------------------
                                                                                  

consensus_9718#0      AAGATCAAAGTTAATGATTTTGTCGGAACTAATATCCAGTGATAGTTCTTTTCAACATAG 660
consensus_9718#2      ------------------------------------------------------------
consensus_9718#1      ------------------------------------------------------------
                                                                                  

consensus_9718#0      GTTACATATGTAGTAATATGTTTCTTCATAAGTTGAGGAGCCATGGAAATAATAATTGAG 720
consensus_9718#2      ------------------------------------------------------------
consensus_9718#1      ------------------------------------------------------------
                                                                                  

consensus_9718#0      AGGTGTATGGACATATGGTTAGTATGGTTAGAGGGGTAAAGGTAAAGGCTAAATTGCTTT 780
consensus_9718#2      ------------------------------------------------------------
consensus_9718#1      ------------------------------------------------------------
                                                                                  

consensus_9718#0      GATTAGCAGCTGGGATTTGTCTTTTAGCGCCTGATTTGTGTTGCATTTCAATATGGGTGC 840
consensus_9718#2      ------------------------------------------------------------
consensus_9718#1      ------------------------------------------------------------
                                                                                  

consensus_9718#0      CCATATTAGGCTAATACATGTAAATCTCATGTGGTTGACTTCAACATTGTTCTGGTGAGG 900
consensus_9718#2      ------------------------------------------------------------
consensus_9718#1      ------------------------------------------------------------
                                                                                  

consensus_9718#0      CCCTTTTAGGGTAACTGGGTGCTGAGGTCATGCTCCATGATTCATGGCCTATGGCTGGGA 960
consensus_9718#2      ------------------------------------------------------------
consensus_9718#1      ------------------------------------------------------------
                                                                                  

consensus_9718#0      ACTGTACAAAATGCAAAAACTGATGTTAATATTACCGTATAAATATATGAATTTATGATA 1020
consensus_9718#2      ------------------------------------------------------------
consensus_9718#1      ------------------------------------------------------------
                                                                                  

consensus_9718#0      AGTTTGACTCCAGAGGCAATTGCAGAGAGAGTCCGACAGCATTGCTGATTTTTTGGCTGG 1080
consensus_9718#2      ------------------------------------------------------------
consensus_9718#1      ------------------------------------------------------------
                                                                                  

consensus_9718#0      CTGTTGCTGAATATGTCCGCTAATGCCATTACTGTCGTTCCATTTACAGTGGTTGATCTG 1140
consensus_9718#2      ------------------------------------------------------------
consensus_9718#1      ------------------------------------------------------------
                                                                                  

consensus_9718#0      TTTGTATTGGTTGTTTGGGTGCTTGCCAATCATCTACCGTATGTTAAACCTAGGGATGGA 1200
consensus_9718#2      ------------------------------------------------------------
consensus_9718#1      ------------------------------------------------------------
                                                                                  

consensus_9718#0      TTTAAAATCTATTTTTACTGGTTGACAGACACAGCATCAGTATTCAGTAGTCCTATAGAT 1260
consensus_9718#2      ------------------------------------------------------------
consensus_9718#1      ------------------------------------------------------------
                                                                                  

consensus_9718#0      ATGCCAAGCTGTAGTTTAATCCATGGTTTTTCTGCCAGTACTTGCAATGATAGGTCTGTT 1320
consensus_9718#2      ------------------------------------------------------------
consensus_9718#1      ------------------------------------------------------------
                                                                                  

consensus_9718#0      TAGTATGATATTAACAGTTTTCTATGGCTCGGTAATATGGTAACTAAACTGGCATAGCTG 1380
consensus_9718#2      ------------------------------------------------------------
consensus_9718#1      ------------------------------------------------------------
                                                                                  

consensus_9718#0      TAGCCTGTAGTCAACATGTTATGGCCATTGATAAGTTACATCATACTTGGGACTACGATA 1440
consensus_9718#2      ------------------------------------------------------------
consensus_9718#1      --------------------------------------CAGCAGCGTGAGGGCTAAGCTT 22
                                                                                  

consensus_9718#0      CATTCTTTGTAGACTATAGTTTTCTAGCTCGGTATGTTTTTGTAATATTCCGAATTGTGA 1500
consensus_9718#2      ------------------------------------------------------------
consensus_9718#1      CGCGGCGGATTGGAGATGACGCAGAAGCAGAGCCAGTTCAAGGGGCAGGGAAAGAAGAAG 82
                                                                                  

consensus_9718#0      GGGATGCTGCCTCAGTTTTCTATTCCACTTTCTTGTTATAACAAGATTGGTAACTCAATT 1560
consensus_9718#2      ------------------------------------------------------------
consensus_9718#1      ACCATCCCTCCCAACCGCCATGGCAAGGCGCCCCACGTCCGCAAA---GGGAAGAGGGCC 139
                                                                                  

consensus_9718#0      GCATGACCGTGTAGTTGTTGTTGATGTTCTACGGTTTGATCTGAAAAACCAGTTTTACAT 1620
consensus_9718#2      ------------------------------------------------------------
consensus_9718#1      GTGAAGCCGACCAAGT-TCACCAAGGACATGGACGCCGATAAGGAACTGTGAATATCGAT 198
                                                                                  

consensus_9718#0      TGCTTCTTGTTGTATTTTGATTTACAGGATAAGTTGTGTTTGTGAACTATGTAGATGTTT 1680
consensus_9718#2      ------------------------------------------------------------
consensus_9718#1      CCCTCCGTCCTCTCTATGTAACGATTCTCTCATTTCCCCCCTCCCACCGCCAAAGTAATT 258
                                                                                  

consensus_9718#0      GGGAAATATTTGGCAATGTTTTACCTTGACTTGCGGTGTGGTTTTTGCACGGGCAATCGT 1740
consensus_9718#2      -------------------------------CACGGCGTCGCCACCGCCACACCACACAT 29
consensus_9718#1      GCCT--TTTTCGTTAACATTATATACT--CTGACATCATCTCCCTTTTATTTTTTCTCGT 314
                                                       *    *                  * *

consensus_9718#0      GTCCGAAGTTATCGAGGATCAAATTTTATTAGACTATTTTGGTGTTGCAGATTTCAGTAG 1800
consensus_9718#2      CCCCGA-----CCCACCGCCGGTTCCCAC----CCAGCTCGA--TCGCGAGCGAGAGGGG 78
consensus_9718#1      CTCC-------TCGTTTTCCCCTCCCTCTC--GCTCCCTTGT--TAGATACCTGCCGCAG 363
                        **        *      *             *    * *   * *         *  *

consensus_9718#0      GTTTGGCATTCTCTATGATACTAATAAACGACCACTTTTGGCGCCATGTCTGTTTGTCAA 1860
consensus_9718#2      CTACGGAAACCCCAGCAGCGT-----GAGGGCTAAGCTTCGCGGCAGGATTGGAGATGAC 133
consensus_9718#1      CTCCGCCTCTCTCCACTTATCTTTCCCCCCGCCGTTCCTCTTAACAACTTTTTATCTCCC 423
                       *  *     * *                  *      *     **    *     *   

consensus_9718#0      ATGGTGACATTAGAGTTTGGAATAATTGAAAGCAGACTAGACCTTCTGATCTTATT-GTT 1919
consensus_9718#2      GCAGAAGCAGAGCCAGTTCAAGGGGCAGGGAAAGAAGAAGACCATCCCTCCCAACCAGCC 193
consensus_9718#1      CCTCACGTCCCGAACTTCTTTATCGTACATCCCCCCCTCTCCTTCTTTATCCCGCTCCTT 483
                                      *                        *        *         

consensus_9718#0      AT--TAACTTTGTGATTACGTTTTTTTCTTATTTGAGATATTTAAGATATTTAGTAACCA 1977
consensus_9718#2      ATGGCAAGGCAGCACCCACAGTCACAGCAAAGGGAAGAGGGCCGTGAAGCCGACCAA--- 250
consensus_9718#1      GTCGCACGCCGCCTTCTTTACTCTCTCCCTGCTCG-------TGAGCTGCCNTCCCGTT- 535
                       *   *               *     *                 *              

consensus_9718#0      GTGAACTCATTTGATGTTCTCTTCTTCCCA-GGAACTCAC--AAAATTCATCAACC--AG 2032
consensus_9718#2      GTTCAACCAATGGACATGGACAGCCAGATAAGGAACTCAACAAAAATTCATCAAACCAAG 310
consensus_9718#1      GTCCCCTCACCTCCCGCCCTTAT-TATTTACGCTCGTTCCCCCCTTTTCCTTCACCCACA 594
                      **     **                    * *    *         *** *  * *    

consensus_9718#0      TGCAACGAGAAGAAGGCTGCAAGTCTTGCCAGCAAAGAAGGCGGCGACCTCAGTATACTC 2092
consensus_9718#2      TGCAACGAGAAGAAGGCTGCAAGTCTTGCCAGCAAAGAAGGCGGCGACCTCAGTATACTC 370
consensus_9718#1      TTCACCTCC------GCCACTGTCCTATTGATTCGCCCCGTCGCCCCCCTCGGTATTCTC 648
                      * ** *         **  *    **    *        * ** *  **** **** ***

consensus_9718#0      AAGGCGGACGTTGATCCCTCCAATTCAAACTAGGAATCTGTGGCTACCTCTGCCTACGGC 2152
consensus_9718#2      AAGGCGGACGTTGATCCCTCCAATTCAAACTAGGAATCTGTGGCTACCTCTGCCTACGGC 430
consensus_9718#1      CCTATCCCCATC--TCCCTTCTACTTCTAC--ATATTCTAATCTCGCTCCTCCCCGCCTC 704
                              * *   ***** * * *   **    * ***       *  ** **  *  *

consensus_9718#0      TATGTGCTATAGAAGATGAGTGTGTGGAATGGATATTATGTTACATTGCATACTTGCATT 2212
consensus_9718#2      TATGTGCTATAGAAGATGAGTGTGTGGAATGGATATTATGTTACATTGCATACTTGCATT 490
consensus_9718#1      TC----CCACTTTTCACCCCTGTCCGGCCTCATCGCCCTCCCCCCTCACTT-TGTGCGCC 759
                      *     * *      *    ***  **  *        *    * *  * *   ***   

consensus_9718#0      CTAGTATTTCCCTGCAGAAATGTAGTAATTCTGTATTTCTCTGAAGAAGGTTATGCTTAC 2272
consensus_9718#2      CTAGTATTTCCCTGCAGAAATGTAGTAATTCTGTATTTCTCTGAAGAAGTTTATGCTTAC 550
consensus_9718#1      CCATTTTCCCCATGC------GCTGCCCCCCCTTTTTCATCCCACTA--TCTTTTTTTCC 811
                      * * * *  ** ***      *  *     *  * **  **  *  *    * *  ** *

consensus_9718#0      TGCTAAATGTTTACAATCAATCAACGGTTAATACTGTAAAGTTCTCTTCTCATACATACA 2332
consensus_9718#2      GGCTAAATGTTTACATGCTGCTATATTTACAATCAATCAACGNGT--------------- 595
consensus_9718#1      CACTCGCTCCCCACA-TTAGTTAACTCC---ATCATTAGAACTCATACTCCGCGCGTACT 867
                        **   *    ***       *          *  *  *                    

consensus_9718#0      AATAATTAAGGCGAAAGCAATAGACCCATGCGACGTACGCGAGGCACACGCACGGGTTTC 2392
consensus_9718#2      ------------------------------------------------------------
consensus_9718#1      GCCGCCATGGATGTTACCAA---------------------------------------- 887
                                                                                  

consensus_9718#0      GCCACGCGCCGTACAACTCCGAAGATGCAAGTAGTGAAGATGCATCCTGTGAGCAATGGT 2452
consensus_9718#2      ------------------------------------------------------------
consensus_9718#1      ------------------------------------------------------------
                                                                                  

consensus_9718#0      CAGGCTTGTAGAGTTGCATATACCATTTGGGGCTTTTGGGATGCGTGTGTGCGAGAGAGA 2512
consensus_9718#2      ------------------------------------------------------------
consensus_9718#1      ------------------------------------------------------------
                                                                                  

consensus_9718#0      TAATAGCATATGTTTATTGAGAAGTAAGAGATGGTCGAACATGTGAATGGACGTGCTCCA 2572
consensus_9718#2      ------------------------------------------------------------
consensus_9718#1      ------------------------------------------------------------
                                                                                  

consensus_9718#0      GACCCACGATTTAAGTCAAAGGGCTTAAATTCAAAAAAAAAAAA 2616
consensus_9718#2      --------------------------------------------
consensus_9718#1      --------------------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)