cluster # 9723

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Oryza sativa
cluster # 9723 cluster # 9723 Sequences # 6 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9723#0 length = 1160 sequences # 3
consensus_9723#1 length = 675 sequences # 1

consensus_9723#2 length = 459 sequences # 1
consensus_9723#3 length = 361 sequences # 1

consensusID : consensus_9723#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1160
fasta sequence

                              [GGGTTCTTGTAGACCCATTTCAGAGACATGGATTTTGCAGCCGAGCAGACTTTAGTGATGAGCCAGCTTTCAGTTGGATACGTAAACTCCCAGCTGAAACCAAGACAGCTATTCATCACTCCAAAATATTGTTCTGTAATGGCTATGCTTTTGATGAACTTTTCCCTGATGTGATCTCGTCCGCTATTGATTGCGCAATTGATGCGGGAACAGCAGTATTTTTTGATCCNGGTCCNCGAGGAAAATCTCTCTTACATGGTACCCTTGATGAACAGAGGGCACTTGAGCATTCTCTGAGGCTCAGT-GATGTT-CTGCTTTT-AACATCAGAC-GAGGCTG-AGTCCCTGACGNACATCAGAAACCCAGTCCAGGCAGGGCAAGAGTTGCTGAAGAGGGGGATTCGCACAAAGTGGGTTGTCATAAAAATGGGCTCAAAGGGATCAATCATGGTTACGAAGAGTGCTGTCTCCAGTGCACCTTCATTTAAGATTGACGTTGTGGACACCGTTGGATATGGAGATAGCTTTACTGCTGCTATAGCTTTTGGGTTCCTCCACAACTTGCCAGCAGTTAGCACACTGACACTAGCAAATGCAGTGGGTGCTGCAACTGCCACTGGCTGTGGGGCAGGTCGGAATGTTGCTCACCTGGATAAAGTATTACAACTCTTGAGAGAATCCAATATCAATGAGGACGATACGCCGTGGAGCGAGTTGATTGAAGCAAGTTCATTCTGTTCTGAAGTTTCAGTGCTGTCTAAGACAGCAGTTAATAGTTTCAGTGACCGCCTTGTGCATGTTCCTACTTGCAATGTGGTTTCCAACCTCCTTTCTATGCTTGAGGCAGTGTCGGAGCGAAGCACAGTTCANGCTTAATCCCATCTTGAATGGTATATGGGGGCCCCTTTTTTTTGCCATTAAATCATTCATATAGATTCTTCTTTTGNCAGACCGTCACACTGATTTCATGTGACGAGTGATAGTTGGAGGCTGGCCACCAAGGNAAGCTATTTGTTGGAAAGATGNTTTGGAAGCTTTTANTAAATGTGCAGTAGTGGTCTTGGCTAGAAACATCGTATTTTACCCTAACTTTTGCACTATTTGTTGGAACATGGTGTCCCTTTAACTAACCAAGTTATCTTCGACTGATCAAAAAAAAAAAAA]

[+] EMBL OSS13946A            [GGGTTCTTGTAGACCCATTTCAGAGACATGGATTTTGCAGCCGAGCAGACTTTAGTGATGAGCCAGCTTTCAGTTGGATACGTAAACTCCCAGCTGAAACCAAGACAGCTATTCATCACTCCAAAATATTGTTCTGTAATGGCTATGCTTTTGATGAACTTTTCCCTGATGTGATCTCGTCCGCTATTGATTGCGCAATTGATGCGGGAACAGCAGTATTTTTTGATCCNGGTCCNCGAGGAAAATCTCTCTTACATGGTACCCTTGATGAACAGAGGGCACTTGAGCATTCTCTGAGGCTCAGTGGATGTTCCTGCTTTTAAACATCAGACGGAGGCTGAAGTCCCTGACGNAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CA766992             [                                                                                                                                                                                                                AACAGCAGTATTTTTTGATCCTGGTCCTCGAGGAAAATCTCTCTTACATGGTACCCTTGATGAACAGAGGGCACTTGAGCATTCTCTGAGGCTCAGT GATGTT CTGCTTTT AACATCAGAC GAGGCTG AGTCCCTGACGAACATCAGAAACCCAGTCCAGGCAGGGCAAGAGTTGCTGAAGAGGGGGATTCGCACAAAGTGGGTTGTCATAAAAATGGGCTCAAAGGGATCAATCATGGTTACGAAGAGTGCTGTCTCCAGTGCACCTTCATTTAAGATTGACGTTGTGGACACCGTTGGATATGGAGATAGCTTTACTGCTGCTATAGCTTTTGGGTTCCTCCACAACTTGCCAGCAGTTAGCACACTGACACTAGCAAATGCAGTGGGTGCTGCAACTGCCACTGGCTGTGGGGCAGGTCGGAATGTTGCTCACCTGGATAAAGTATTACAACTCTTGAGAGAATCCAATATCAATGAGGACGATACGCCGTGGAGCGAGTTGATTGAAGCAAGTTCATTCTGTTCTGAAGTTTCAGTGCTGTCTAAGACAGCAGTTAATAGTTTCAGTGACCGCCTTGTGCATGTTCCTACTTGCAATGTGGTTTCCAACCTCCTTTCTATGCTTGAGGCAGTGTCGGAGCGAAGCACAGTTCANGCTTAATCCCATCTTGAATGGTATATGGGGGCCCCTTTTTTTTGCCATTAAATCATTCATATAGATTCTTCTTTTGNCAGACCGTCACACTGATTTCATGTGACGAGTGATAGTTGGAGGCTGGCCACCAAGGNAAGCTATTTGTTGGAAAGATGNTTTGGAAGCTTTTAN                                                                                                                           ]
[-] EMBL CA759306             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TCCAGTGCACCTTCATTTAAGATTGACGTTGTGGACACCGTTGGATATGGAGATAGCTTTACTGCTGCTATAGCTTTTGGGTTCCTCCACAACTTGCCAGCAGTTAGCACACTGACACTAGCAAATGCAGTGGGTGCTGCAACTGCCACTGGCTGTGGGGCAGGTCGGAATGTTGCTCACCTGGATAAAGTATTACAACTCTTGAGAGAATCCAATATCAATGAGGACGATACGCCGTGGAGCGAGTTGATTGAAGCAAGTTCATTCTGTTCTGAAGTTTCAGTGCTGTCTAAGACAGCAGTTAATAGTTTCAGTGACCGCCTTGTGCATGTTCCTACTTGCAATGTGGTTTCCAACCTCCTTTCTATGCTTGAGGCAGTGTCGGAGCGAAGCACAGTTCAGGCTTAATCCCATCTTGAATGGTATATGGGGGCCC  TTTTTTTGCCATTAAATCATTCATATAGATTCTTCTTTTGCCAGACCGTCACACTGATTTCATGTGACGAGTGATAGTTGGAGGCTGGCCACCAGGGAAAGCTATTTGTTGGAAAGATGTTTTGGAAGCTTTTAGTAAATGTGCAGTAGTGGTCTTGGCTAGAAACATCGTATTTTACCCTAACTTTTGCACTATTTGTTGGAACATGGTGTCCCTTTAACTAACCAAGTTATCTTCGACTGATCAAAAAAAAAAAAA]




>consensus_9723#0
GGGTTCTTGTAGACCCATTTCAGAGACATGGATTTTGCAGCCGAGCAGACTTTAGTGATG
AGCCAGCTTTCAGTTGGATACGTAAACTCCCAGCTGAAACCAAGACAGCTATTCATCACT
CCAAAATATTGTTCTGTAATGGCTATGCTTTTGATGAACTTTTCCCTGATGTGATCTCGT
CCGCTATTGATTGCGCAATTGATGCGGGAACAGCAGTATTTTTTGATCCNGGTCCNCGAG
GAAAATCTCTCTTACATGGTACCCTTGATGAACAGAGGGCACTTGAGCATTCTCTGAGGC
TCAGTGATGTTCTGCTTTTAACATCAGACGAGGCTGAGTCCCTGACGNACATCAGAAACC
CAGTCCAGGCAGGGCAAGAGTTGCTGAAGAGGGGGATTCGCACAAAGTGGGTTGTCATAA
AAATGGGCTCAAAGGGATCAATCATGGTTACGAAGAGTGCTGTCTCCAGTGCACCTTCAT
TTAAGATTGACGTTGTGGACACCGTTGGATATGGAGATAGCTTTACTGCTGCTATAGCTT
TTGGGTTCCTCCACAACTTGCCAGCAGTTAGCACACTGACACTAGCAAATGCAGTGGGTG
CTGCAACTGCCACTGGCTGTGGGGCAGGTCGGAATGTTGCTCACCTGGATAAAGTATTAC
AACTCTTGAGAGAATCCAATATCAATGAGGACGATACGCCGTGGAGCGAGTTGATTGAAG
CAAGTTCATTCTGTTCTGAAGTTTCAGTGCTGTCTAAGACAGCAGTTAATAGTTTCAGTG
ACCGCCTTGTGCATGTTCCTACTTGCAATGTGGTTTCCAACCTCCTTTCTATGCTTGAGG
CAGTGTCGGAGCGAAGCACAGTTCANGCTTAATCCCATCTTGAATGGTATATGGGGGCCC
CTTTTTTTTGCCATTAAATCATTCATATAGATTCTTCTTTTGNCAGACCGTCACACTGAT
TTCATGTGACGAGTGATAGTTGGAGGCTGGCCACCAAGGNAAGCTATTTGTTGGAAAGAT
GNTTTGGAAGCTTTTANTAAATGTGCAGTAGTGGTCTTGGCTAGAAACATCGTATTTTAC
CCTAACTTTTGCACTATTTGTTGGAACATGGTGTCCCTTTAACTAACCAAGTTATCTTCG
ACTGATCAAAAAAAAAAAAA

consensusID : consensus_9723#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 675
fasta sequence

                              [ATCATGGTTACGAAGAGTGCTGTCTCCAGTGCACCTTCATTTAAGATTGACGTTGTGGACACCGTTGGATGTGGAGATAGCTTTACTGCTGCTATAGCTTTTGGGTTCCTCCACAACTTGCCAGCAGTTAGCACACTGACACTAGCAAATGCAGTGGGTGCTGCAACTGCCACTGGCTGTGGGGCAGGTTGGAATGTTGCTCACCTGGATAAAGTATTACAACTCTTGAGAGAATCCAATATCAATGAGGGCGATACGCCGTGGAGCGAGTTGATTGAAGCAAGTTCATTCTGTTTTGAAGTTTCAGTGCTGTCTAAGACAGCAGTTAATAGTTTCAGTGACCGCCTTGTGCATGTTCCTACCTGCAATGTGGTTTCCAACCTCCCTTCTATGCTTGAGGCAGTGTTGGAGCGAAGCACAGTTCAGGCTTAATCCCATCTTGAATGGTATATGGGGGCCCTTTTTTGCCATTAAATCATTTATATAGATTCTTCTTTTGCCAGACCGTCACCCTGATTTCATGTGACGAGTGATAGTTGGAGGCTGGCCCCCAGGGAAAGCTATTTGTTGGAAAGATGTTTTGGAAGCTTTTAGTAAATGTGCAGTAGTGGTCTCGGCTAGAAACATCGTATTTTACCCTAACTTTTGCCCTGTTTGTTGGAAAAAAAAAAAAAA]

[-] EMBL CA759305             [ATCATGGTTACGAAGAGTGCTGTCTCCAGTGCACCTTCATTTAAGATTGACGTTGTGGACACCGTTGGATGTGGAGATAGCTTTACTGCTGCTATAGCTTTTGGGTTCCTCCACAACTTGCCAGCAGTTAGCACACTGACACTAGCAAATGCAGTGGGTGCTGCAACTGCCACTGGCTGTGGGGCAGGTTGGAATGTTGCTCACCTGGATAAAGTATTACAACTCTTGAGAGAATCCAATATCAATGAGGGCGATACGCCGTGGAGCGAGTTGATTGAAGCAAGTTCATTCTGTTTTGAAGTTTCAGTGCTGTCTAAGACAGCAGTTAATAGTTTCAGTGACCGCCTTGTGCATGTTCCTACCTGCAATGTGGTTTCCAACCTCCCTTCTATGCTTGAGGCAGTGTTGGAGCGAAGCACAGTTCAGGCTTAATCCCATCTTGAATGGTATATGGGGGCCCTTTTTTGCCATTAAATCATTTATATAGATTCTTCTTTTGCCAGACCGTCACCCTGATTTCATGTGACGAGTGATAGTTGGAGGCTGGCCCCCAGGGAAAGCTATTTGTTGGAAAGATGTTTTGGAAGCTTTTAGTAAATGTGCAGTAGTGGTCTCGGCTAGAAACATCGTATTTTACCCTAACTTTTGCCCTGTTTGTTGGAAAAAAAAAAAAAA]




>consensus_9723#1
ATCATGGTTACGAAGAGTGCTGTCTCCAGTGCACCTTCATTTAAGATTGACGTTGTGGAC
ACCGTTGGATGTGGAGATAGCTTTACTGCTGCTATAGCTTTTGGGTTCCTCCACAACTTG
CCAGCAGTTAGCACACTGACACTAGCAAATGCAGTGGGTGCTGCAACTGCCACTGGCTGT
GGGGCAGGTTGGAATGTTGCTCACCTGGATAAAGTATTACAACTCTTGAGAGAATCCAAT
ATCAATGAGGGCGATACGCCGTGGAGCGAGTTGATTGAAGCAAGTTCATTCTGTTTTGAA
GTTTCAGTGCTGTCTAAGACAGCAGTTAATAGTTTCAGTGACCGCCTTGTGCATGTTCCT
ACCTGCAATGTGGTTTCCAACCTCCCTTCTATGCTTGAGGCAGTGTTGGAGCGAAGCACA
GTTCAGGCTTAATCCCATCTTGAATGGTATATGGGGGCCCTTTTTTGCCATTAAATCATT
TATATAGATTCTTCTTTTGCCAGACCGTCACCCTGATTTCATGTGACGAGTGATAGTTGG
AGGCTGGCCCCCAGGGAAAGCTATTTGTTGGAAAGATGTTTTGGAAGCTTTTAGTAAATG
TGCAGTAGTGGTCTCGGCTAGAAACATCGTATTTTACCCTAACTTTTGCCCTGTTTGTTG
GAAAAAAAAAAAAAA

consensusID : consensus_9723#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 459
fasta sequence

                              [CTGAAGTTTCAGTGCTGTCTAAGACANCAGGTAATAGTTTCAGTGACCGCCTTGTGCATGTTCCTACTTGCAATGTGGGNTCCAACCTCCTTTCTATGCTTGAGGCAGTGTNCNAGCGAAGCACAGTTCANGCTTAATCCCNNGTTGAATGGNGTATGGGGGCCCCTTTTTGGCATTAAATCATTCATATAGATTCTTTCTTTTGCCAGACCGGGACACTGATTTCATGTGACNAGTGATAAGGTGGAGGCTGGNCNCCCAAGGNAAGCTATTTTGNTGGGAAAGATGTTTTAGAANCCTTTAAAGAATGNGCACAANNGGNGCCCCCGCTAAAAAACATCGGATTTTTACCCTAACCTTTTGNNCTATTTTGGGTGGGAACATGGGGGGNCCCCTTTTAACTNAACCCAAAGTTATTCTTTCNACTGGGGCATTCTGGTTTCNGNCCCAATGGAATTT]

[+] EMBL CB096727             [CTGAAGTTTCAGTGCTGTCTAAGACANCAGGTAATAGTTTCAGTGACCGCCTTGTGCATGTTCCTACTTGCAATGTGGGNTCCAACCTCCTTTCTATGCTTGAGGCAGTGTNCNAGCGAAGCACAGTTCANGCTTAATCCCNNGTTGAATGGNGTATGGGGGCCCCTTTTTGGCATTAAATCATTCATATAGATTCTTTCTTTTGCCAGACCGGGACACTGATTTCATGTGACNAGTGATAAGGTGGAGGCTGGNCNCCCAAGGNAAGCTATTTTGNTGGGAAAGATGTTTTAGAANCCTTTAAAGAATGNGCACAANNGGNGCCCCCGCTAAAAAACATCGGATTTTTACCCTAACCTTTTGNNCTATTTTGGGTGGGAACATGGGGGGNCCCCTTTTAACTNAACCCAAAGTTATTCTTTCNACTGGGGCATTCTGGTTTCNGNCCCAATGGAATTT]




>consensus_9723#2
CTGAAGTTTCAGTGCTGTCTAAGACANCAGGTAATAGTTTCAGTGACCGCCTTGTGCATG
TTCCTACTTGCAATGTGGGNTCCAACCTCCTTTCTATGCTTGAGGCAGTGTNCNAGCGAA
GCACAGTTCANGCTTAATCCCNNGTTGAATGGNGTATGGGGGCCCCTTTTTGGCATTAAA
TCATTCATATAGATTCTTTCTTTTGCCAGACCGGGACACTGATTTCATGTGACNAGTGAT
AAGGTGGAGGCTGGNCNCCCAAGGNAAGCTATTTTGNTGGGAAAGATGTTTTAGAANCCT
TTAAAGAATGNGCACAANNGGNGCCCCCGCTAAAAAACATCGGATTTTTACCCTAACCTT
TTGNNCTATTTTGGGTGGGAACATGGGGGGNCCCCTTTTAACTNAACCCAAAGTTATTCT
TTCNACTGGGGCATTCTGGTTTCNGNCCCAATGGAATTT

consensusID : consensus_9723#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 361
fasta sequence

                              [TATGCTTGAGCAGTGTCGGAGCGAAGCACAGTTCAGGCTTAATCCCATCTTGAATGGTATATGGGGGCCCTTTTTTGCCATTAAATCATTCATATAGATTCTTCTTTTGCCAGACCGTCACACTGATTTCATGTGACGAGTGATAGTTGGAGGCTGGCCACCAGGGAAAGCTATTTGTTGGAAAGATGTTTTGGAAGCTTTTAGTAAATGTGCAGTAGTGGTCTCGGCTAGAAACATCGTATTTTACCCTAACTTTTGCACTATTTGTTGGAACATGGTGTCCCTTTAACTAACCAAGTTATCTTCGACTGATCATCTGTTTGCGCCATGATATTTTGCCCCTTTCTGGAGCCAAAAAAAA]

[+] EMBL BI800919             [TATGCTTGAGCAGTGTCGGAGCGAAGCACAGTTCAGGCTTAATCCCATCTTGAATGGTATATGGGGGCCCTTTTTTGCCATTAAATCATTCATATAGATTCTTCTTTTGCCAGACCGTCACACTGATTTCATGTGACGAGTGATAGTTGGAGGCTGGCCACCAGGGAAAGCTATTTGTTGGAAAGATGTTTTGGAAGCTTTTAGTAAATGTGCAGTAGTGGTCTCGGCTAGAAACATCGTATTTTACCCTAACTTTTGCACTATTTGTTGGAACATGGTGTCCCTTTAACTAACCAAGTTATCTTCGACTGATCATCTGTTTGCGCCATGATATTTTGCCCCTTTCTGGAGCCAAAAAAAA]




>consensus_9723#3
TATGCTTGAGCAGTGTCGGAGCGAAGCACAGTTCAGGCTTAATCCCATCTTGAATGGTAT
ATGGGGGCCCTTTTTTGCCATTAAATCATTCATATAGATTCTTCTTTTGCCAGACCGTCA
CACTGATTTCATGTGACGAGTGATAGTTGGAGGCTGGCCACCAGGGAAAGCTATTTGTTG
GAAAGATGTTTTGGAAGCTTTTAGTAAATGTGCAGTAGTGGTCTCGGCTAGAAACATCGT
ATTTTACCCTAACTTTTGCACTATTTGTTGGAACATGGTGTCCCTTTAACTAACCAAGTT
ATCTTCGACTGATCATCTGTTTGCGCCATGATATTTTGCCCCTTTCTGGAGCCAAAAAAA
A

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9723#0      GGGTTCTTGTAGACCCATTTCAGAGACATGGATTTTGCAGCCGAGCAGACTTTAGTGATG 60
consensus_9723#1      ------------------------------------------------------------
consensus_9723#3      ------------------------------------------------------------
consensus_9723#2      ------------------------------------------------------------
                                                                                  

consensus_9723#0      AGCCAGCTTTCAGTTGGATACGTAAACTCCCAGCTGAAACCAAGACAGCTATTCATCACT 120
consensus_9723#1      ------------------------------------------------------------
consensus_9723#3      ------------------------------------------------------------
consensus_9723#2      ------------------------------------------------------------
                                                                                  

consensus_9723#0      CCAAAATATTGTTCTGTAATGGCTATGCTTTTGATGAACTTTTCCCTGATGTGATCTCGT 180
consensus_9723#1      ------------------------------------------------------------
consensus_9723#3      ------------------------------------------------------------
consensus_9723#2      ------------------------------------------------------------
                                                                                  

consensus_9723#0      CCGCTATTGATTGCGCAATTGATGCGGGAACAGCAGTATTTTTTGATCCNGGTCCNCGAG 240
consensus_9723#1      ------------------------------------------------------------
consensus_9723#3      ------------------------------------------------------------
consensus_9723#2      ------------------------------------------------------------
                                                                                  

consensus_9723#0      GAAAATCTCTCTTACATGGTACCCTTGATGAACAGAGGGCACTTGAGCATTCTCTGAGGC 300
consensus_9723#1      ------------------------------------------------------------
consensus_9723#3      ------------------------------------------------------------
consensus_9723#2      ------------------------------------------------------------
                                                                                  

consensus_9723#0      TCAGTGATGTTCTGCTTTTAACATCAGACGAGGCTGAGTCCCTGACGNACATCAGAAACC 360
consensus_9723#1      ------------------------------------------------------------
consensus_9723#3      ------------------------------------------------------------
consensus_9723#2      ------------------------------------------------------------
                                                                                  

consensus_9723#0      CAGTCCAGGCAGGGCAAGAGTTGCTGAAGAGGGGGATTCGCACAAAGTGGGTTGTCATAA 420
consensus_9723#1      ------------------------------------------------------------
consensus_9723#3      ------------------------------------------------------------
consensus_9723#2      ------------------------------------------------------------
                                                                                  

consensus_9723#0      AAATGGGCTCAAAGGGATCAATCATGGTTACGAAGAGTGCTGTCTCCAGTGCACCTTCAT 480
consensus_9723#1      --------------------ATCATGGTTACGAAGAGTGCTGTCTCCAGTGCACCTTCAT 40
consensus_9723#3      ------------------------------------------------------------
consensus_9723#2      ------------------------------------------------------------
                                                                                  

consensus_9723#0      TTAAGATTGACGTTGTGGACACCGTTGGATATGGAGATAGCTTTACTGCTGCTATAGCTT 540
consensus_9723#1      TTAAGATTGACGTTGTGGACACCGTTGGATGTGGAGATAGCTTTACTGCTGCTATAGCTT 100
consensus_9723#3      ------------------------------------------------------------
consensus_9723#2      ------------------------------------------------------------
                                                                                  

consensus_9723#0      TTGGGTTCCTCCACAACTTGCCAGCAGTTAGCACACTGACACTAGCAAATGCAGTGGGTG 600
consensus_9723#1      TTGGGTTCCTCCACAACTTGCCAGCAGTTAGCACACTGACACTAGCAAATGCAGTGGGTG 160
consensus_9723#3      ------------------------------------------------------------
consensus_9723#2      ------------------------------------------------------------
                                                                                  

consensus_9723#0      CTGCAACTGCCACTGGCTGTGGGGCAGGTCGGAATGTTGCTCACCTGGATAAAGTATTAC 660
consensus_9723#1      CTGCAACTGCCACTGGCTGTGGGGCAGGTTGGAATGTTGCTCACCTGGATAAAGTATTAC 220
consensus_9723#3      ------------------------------------------------------------
consensus_9723#2      ------------------------------------------------------------
                                                                                  

consensus_9723#0      AACTCTTGAGAGAATCCAATATCAATGAGGACGATACGCCGTGGAGCGAGTTGATTGAAG 720
consensus_9723#1      AACTCTTGAGAGAATCCAATATCAATGAGGGCGATACGCCGTGGAGCGAGTTGATTGAAG 280
consensus_9723#3      ------------------------------------------------------------
consensus_9723#2      ------------------------------------------------------------
                                                                                  

consensus_9723#0      CAAGTTCATTCTGTTCTGAAGTTTCAGTGCTGTCTAAGACAGCAGTTAATAGTTTCAGTG 780
consensus_9723#1      CAAGTTCATTCTGTTTTGAAGTTTCAGTGCTGTCTAAGACAGCAGTTAATAGTTTCAGTG 340
consensus_9723#3      ------------------------------------------------------------
consensus_9723#2      ---------------CTGAAGTTTCAGTGCTGTCTAAGACANCAGGTAATAGTTTCAGTG 45
                                                                                  

consensus_9723#0      ACCGCCTTGTGCATGTTCCTACTTGCAATGTGGTTTCCAACCTCCTTTCTATGCTTGAGG 840
consensus_9723#1      ACCGCCTTGTGCATGTTCCTACCTGCAATGTGGTTTCCAACCTCCCTTCTATGCTTGAGG 400
consensus_9723#3      -------------------------------------------------TATGCTTGAG- 10
consensus_9723#2      ACCGCCTTGTGCATGTTCCTACTTGCAATGTGGGNTCCAACCTCCTTTCTATGCTTGAGG 105
                                                                       ********** 

consensus_9723#0      CAGTGTCGGAGCGAAGCACAGTTCANGCTTAATCCCATCTTGAATGGTATATGGGGGCCC 900
consensus_9723#1      CAGTGTTGGAGCGAAGCACAGTTCAGGCTTAATCCCATCTTGAATGGTATATGGGGGCCC 460
consensus_9723#3      CAGTGTCGGAGCGAAGCACAGTTCAGGCTTAATCCCATCTTGAATGGTATATGGGGGCCC 70
consensus_9723#2      CAGTGTNCNAGCGAAGCACAGTTCANGCTTAATCCCNNGTTGAATGGNGTATGGGGGCCC 165
                      ******   **************** **********   ********  ***********

consensus_9723#0      CTTTTTTTTGCCATTAAATCATTCATATAGATTCTT-CTTTTGNCAGACCGTCACACTGA 959
consensus_9723#1      ---TTTTTTGCCATTAAATCATTTATATAGATTCTT-CTTTTGCCAGACCGTCACCCTGA 516
consensus_9723#3      ---TTTTTTGCCATTAAATCATTCATATAGATTCTT-CTTTTGCCAGACCGTCACACTGA 126
consensus_9723#2      ---CTTTTTGGCATTAAATCATTCATATAGATTCTTTCTTTTGCCAGACCGGGACACTGA 222
                          ****** ************ ************ ****** *******  ** ****

consensus_9723#0      TTTCATGTGACGAGTGATA-GTTGGAGGCTGGCCACC-AAGGNAAGCTATTT--GTTGGA 1015
consensus_9723#1      TTTCATGTGACGAGTGATA-GTTGGAGGCTGGCCCCC-AGGGAAAGCTATTT--GTTGGA 572
consensus_9723#3      TTTCATGTGACGAGTGATA-GTTGGAGGCTGGCCACC-AGGGAAAGCTATTT--GTTGGA 182
consensus_9723#2      TTTCATGTGACNAGTGATAAGGTGGAGGCTGGNCNCCCAAGGNAAGCTATTTTGNTGGGA 282
                      *********** ******* * ********** * ** * ** *********   * ***

consensus_9723#0      AAGATGNTTTGGAAGCTTTTANTAAATGTGCAGTAGTGGT---CTTGGCTAGAAACATCG 1072
consensus_9723#1      AAGATGTTTTGGAAGCTTTTAGTAAATGTGCAGTAGTGGT---CTCGGCTAGAAACATCG 629
consensus_9723#3      AAGATGTTTTGGAAGCTTTTAGTAAATGTGCAGTAGTGGT---CTCGGCTAGAAACATCG 239
consensus_9723#2      AAGATGTTTTAGAANCCTTTAAAGAATGNGCACAANNGGNGCCCCCGCTAAAAAACATCG 342
                      ****** *** *** * ****   **** ***  *  **    *  *   * ********

consensus_9723#0      TATTTT-ACCCTAAC-TTTTGCACTATTT---GTTGGAACATGGTGTCCCTTTAACTAAC 1127
consensus_9723#1      TATTTT-ACCCTAAC-TTTTGCCCTGTTT---GTTGGAAAAAAAAAAAAAA--------- 675
consensus_9723#3      TATTTT-ACCCTAAC-TTTTGCACTATTT---GTTGGAACATGGTGTCCCTTTAACTAAC 294
consensus_9723#2      GATTTTTACCCTAACCTTTTGNNCTATTTTGGGTGGGAACATGGGGGGNCCCCTTTTAAC 402
                       ***** ******** *****  ** ***   ** **** *                   

consensus_9723#0      CAAGTTATCTTCGACTGATCAAAAAAAAAAAAA--------------------------- 1160
consensus_9723#1      ------------------------------------------------------------
consensus_9723#3      CAAGTTATCTTCGACTGATCATCTGTTTGCGCCATGATATTTTGCCCCTTTCTGGAGCCA 354
consensus_9723#2      TNA---ACCCAAAGTTATTCTTTCNACTGGGGCATTCTGGTTTCNGNCCCAATGGAATTT 459
                                                                                  

consensus_9723#0      -------
consensus_9723#1      -------
consensus_9723#3      AAAAAAA 361
consensus_9723#2      -------