cluster # 9729

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Oryza sativa
cluster # 9729 cluster # 9729 Sequences # 6 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9729#0 length = 1497 sequences # 3

consensus_9729#1 length = 1145 sequences # 2
consensus_9729#2 length = 475 sequences # 1

consensusID : consensus_9729#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1497
fasta sequence

                              [AGCCGCCGGGGCACCGGAGATTAGGAGGACATGTGGTGCGCCTCGTGCCTGGCGTCCGCCTGCGCGGGCTGCACCTGCAACCTGTGCGCGTCAGCGTTGTCCGCCATCTCCCGCCGCTCCGCTCGCCTCGCCTATTGCGGCCTCTTCGCGGCCTCCCTAATACTCTCCTTCCTCATGCGCCAGTTCGCCACGCCTCTCCTCAAGCAAATCCCATGGATAAATACGTTTGATTATACACAACCGGATGAATGGTTTCAAATGAATGCTGTTCTTCGTGTCAGCCTTGGGAACTTCTTGTTTTTTGCAATATTTGCTCTGATGATGATTGGTGTCAAAGACCAAAATGACCGGCGTGATGCATGGCACCATGGTGGCTGGATTGCAAAAATTGTTGTCTGGGTTGTTCTCATCGTTCTTATGTTCTGTGTGCCGAACGTTGTTATTACTATTTATGAGGTACTGTCAAAATTTGGATCCGGCTTGTTTCTTCTGGTGCAGGTCGTGATGCTTTTAGACTTCACAAACAATTGGAATGACTCATGGATTGAGAAGGATGAGCAAAAGTGGGAAATTGCTTTGTTGGTAGTAACTGTGGTTTGCTATCTCTCTACATTTGCCTTCTCTGGTTTGCTCTTCACGTGGTTCAATCCCTCTGGTCATGATTGTGGTCTCAATGTGTTCTTCATTACCATGACCATTATTCTTGCTTTTGCATTCGCCATAATTGCGTTGCACCCCCAGGTCAATGGAAGTGTTATGCCTGCTTCTGTTATTTCAGTTTACTGTGCATACCTGTGTTACACTAGTCTCTCGAGTGAACCAGATGACTATGCATGCAACGGACTTCACAGACACTCTAAGCAGGTTTCAATGAGCGCTCTTATACTCGGGATGCTCACAACTGTTCTCTCTGTCGTGTACTCTGCTGTTCGTGCTGGATCTTCCACTACATTTCTTTCGCCACCATCATCTCCTAGATCTGGAATCAAGAATCCTTTACTTGGTGATGATAACGTGGAGGCGGGGAAAAGCAACAGTAAAGAAATTGATGCGCGCCCCGTGAGCTATTCATATACATTTTTTCACGTTATCTTTGCTCTTGCAAGTATGTATTCAGCCATGCTTCTGACTGGCTGGACGAGCGCTGCTTCAGACAGCTCGGAGCTGATGGATGTTGGATGGACAACTGTTTGGGTTCGCATCTGCACTGAGTGGGCTACGGCTGCATTGTACATCTGGACCCTTGTTGCTCCCCTGCTATTTCCAGACCGGGACTTCTCATAGGCATGTCAAGCATTGTTAAAAACGTGGTTAAACCATGAAATTATATATATATATATGTTTGTGTGTGTGTATGTACGTACGTACGTACGTACGTACGTACGTACGTTATTCGTTGTGGGAAGCCAGTAGTTATGTATAAAGTCCTTATTGACATGTACGCCCTCCCGTTTTTTTAAATATTTAATGCAATTTGATTTTTGGACAAAAAAAAGA]

[+] EMBL AK067011             [AGCCGCCGGGGCACCGGAGATTAGGAGGACATGTGGTGCGCCTCGTGCCTGGCGTCCGCCTGCGCGGGCTGCACCTGCAACCTGTGCGCGTCAGCGTTGTCCGCCATCTCCCGCCGCTCCGCTCGCCTCGCCTATTGCGGCCTCTTCGCGGCCTCCCTAATACTCTCCTTCCTCATGCGCCAGTTCGCCACGCCTCTCCTCAAGCAAATCCCATGGATAAATACGTTTGATTATACACAACCGGATGAATGGTTTCAAATGAATGCTGTTCTTCGTGTCAGCCTTGGGAACTTCTTGTTTTTTGCAATATTTGCTCTGATGATGATTGGTGTCAAAGACCAAAATGACCGGCGTGATGCATGGCACCATGGTGGCTGGATTGCAAAAATTGTTGTCTGGGTTGTTCTCATCGTTCTTATGTTCTGTGTGCCGAACGTTGTTATTACTATTTATGAGGTACTGTCAAAATTTGGATCCGGCTTGTTTCTTCTGGTGCAGGTCGTGATGCTTTTAGACTTCACAAACAATTGGAATGACTCATGGATTGAGAAGGATGAGCAAAAGTGGGAAATTGCTTTGTTGGTAGTAACTGTGGTTTGCTATCTCTCTACATTTGCCTTCTCTGGTTTGCTCTTCACGTGGTTCAATCCCTCTGGTCATGATTGTGGTCTCAATGTGTTCTTCATTACCATGACCATTATTCTTGCTTTTGCATTCGCCATAATTGCGTTGCACCCCCAGGTCAATGGAAGTGTTATGCCTGCTTCTGTTATTTCAGTTTACTGTGCATACCTGTGTTACACTAGTCTCTCGAGTGAACCAGATGACTATGCATGCAACGGACTTCACAGACACTCTAAGCAGGTTTCAATGAGCGCTCTTATACTCGGGATGCTCACAACTGTTCTCTCTGTCGTGTACTCTGCTGTTCGTGCTGGATCTTCCACTACATTTCTTTCGCCACCATCATCTCCTAGATCTGGAATCAAGAATCCTTTACTTGGTGATGATAACGTGGAGGCGGGGAAAAGCAACAGTAAAGAAATTGATGCGCGCCCCGTGAGCTATTCATATACATTTTTTCACGTTATCTTTGCTCTTGCAAGTATGTATTCAGCCATGCTTCTGACTGGCTGGACGAGCGCTGCTTCAGACAGCTCGGAGCTGATGGATGTTGGATGGACAACTGTTTGGGTTCGCATCTGCACTGAGTGGGCTACGGCTGCATTGTACATCTGGACCCTTGTTGCTCCCCTGCTATTTCCAGACCGGGACTTCTCATAGGCATGTCAAGCATTGTTAAAAACGTGGTTAAACCATGAAATTATATATATATATATGTTTGTGTGTGTGTATGTACGTACGTACGTACGTACGTACGTACGTACGTTATTCGTTGTGGGAAGCCAGTAGTTATGTATAAAGTCCTTATTGACATGTACGCCCTCCCGTTTTTTTAAATATTTAATGCAATT                      ]
[+] EMBL CB683293             [                                                                                                                                                                                                                                                                                                                                                     AAATGACCGGCGTGATGCATGGCACCATGGTGGCTGGATTGCAAAAATTGTTGTCTGGGTTGTTCTCATCGTTCTTATGTTCTGTGTGCCGAACGTTGTTATTACTATTTATGAGGTACTGTCAAAATTTGGATCCGGCTTGTTTCTTCTGGTGCAGGTCGTGATGCTTTTAGACTTCACAAACAATTGGAATGACTCATGGATTGAGAAGGATGAGCAAAAGTGGGAAATTGCTTTGTTGGTAGTAACTGTGGTTTGCTATCTCTCTACATTTGCCTTCTCTGGTTTGCTCTTCACGTGGTTCAATCCCTCTGGTCATGATTGTGGTCTCAATGTGTTCTTCATTACCATGACCATTATTCTTGCTTTTGCATTCGCCATAATTGCGTTGCACCCCCAGGTCAATGGAAGTGTTATGCCTGCTTCTGTTATTTCAGTTTACTGTGCATACCTGTGTTACACTAGTCTCTCGAGTGAACCAGATGACTATGCATGCAACGGACTTCACAGACACTCTAAGCAGGTTTCAATGAGCGCTCTTATACTCGGGATGCTCACAACTGTTCTCTCTGTCGTGTACTCTGCTGTTCGTGCTGGATCTTCCACTACATTTCTTTCGCCACCATCATCTCCTAGATCTGGAATCAAGAATCCTTTACTTGGTGATGATAACGTGGAGGCGGGGAAAAGCAACAGTAAAGAAATTGATGCGCGCCCCGTGAGCTATTCATATACATTTTTTCACGTTATCTTTGCTCTTGCAAGTATGTATTCAGCCATGCT                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CB683696             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ATGCCTGCTTCTGTTATTTCAGTTTACTGTGCATACCTGTGTTACACTAGTCTCTCGAGTGAACCAGATGACTATGCATGCAACGGACTTCACAGACACTCTAAGCAGGTTTCAATGAGCGCTCTTATACTCGGGATGCTCACAACTGTTCTCTCTGTCGTGTACTCTGCTGTTCGTGCTGGATCTTCCACTACATTTCTTTCGCCACCATCATCTCCTAGATCTGGAATCAAGAATCCTTTACTTGGTGATGATAACGTGGAGGCGGGGAAAAGCAACAGTAAAGAAATTGATGCGCGCCCCGTGAGCTATTCATATACATTTTTTCACGTTATCTTTGCTCTTGCAAGTATGTATTCAGCCATGCTTCTGACTGGCTGGACGAGCGCTGCTTCAGACAGCTCGGAGCTGATGGATGTTGGATGGACAACTGTTTGGGTTCGCATCTGCACTGAGTGGGCTACGGCTGCATTGTACATCTGGACCCTTGTTGCTCCCCTGCTATTTCCAGACCGGGACTTCTCATAGGCATGTCAAGCATTGTTAAAAACGTGGTTAAACCATGAAATTATATATATATATATGTTTGTGTGTGTGTATGTACGTACGTACGTACGTACGTACGTACGTACGTTATTCGTTGTGGGAAGCCAGTAGTTATGTATAAAGTCCTTATTGACATGTACGCCCTCCCGTATGGTTAAATATTTAATGCAATTTGATTTTTGGACAAAAAAAAGA]




>consensus_9729#0
AGCCGCCGGGGCACCGGAGATTAGGAGGACATGTGGTGCGCCTCGTGCCTGGCGTCCGCC
TGCGCGGGCTGCACCTGCAACCTGTGCGCGTCAGCGTTGTCCGCCATCTCCCGCCGCTCC
GCTCGCCTCGCCTATTGCGGCCTCTTCGCGGCCTCCCTAATACTCTCCTTCCTCATGCGC
CAGTTCGCCACGCCTCTCCTCAAGCAAATCCCATGGATAAATACGTTTGATTATACACAA
CCGGATGAATGGTTTCAAATGAATGCTGTTCTTCGTGTCAGCCTTGGGAACTTCTTGTTT
TTTGCAATATTTGCTCTGATGATGATTGGTGTCAAAGACCAAAATGACCGGCGTGATGCA
TGGCACCATGGTGGCTGGATTGCAAAAATTGTTGTCTGGGTTGTTCTCATCGTTCTTATG
TTCTGTGTGCCGAACGTTGTTATTACTATTTATGAGGTACTGTCAAAATTTGGATCCGGC
TTGTTTCTTCTGGTGCAGGTCGTGATGCTTTTAGACTTCACAAACAATTGGAATGACTCA
TGGATTGAGAAGGATGAGCAAAAGTGGGAAATTGCTTTGTTGGTAGTAACTGTGGTTTGC
TATCTCTCTACATTTGCCTTCTCTGGTTTGCTCTTCACGTGGTTCAATCCCTCTGGTCAT
GATTGTGGTCTCAATGTGTTCTTCATTACCATGACCATTATTCTTGCTTTTGCATTCGCC
ATAATTGCGTTGCACCCCCAGGTCAATGGAAGTGTTATGCCTGCTTCTGTTATTTCAGTT
TACTGTGCATACCTGTGTTACACTAGTCTCTCGAGTGAACCAGATGACTATGCATGCAAC
GGACTTCACAGACACTCTAAGCAGGTTTCAATGAGCGCTCTTATACTCGGGATGCTCACA
ACTGTTCTCTCTGTCGTGTACTCTGCTGTTCGTGCTGGATCTTCCACTACATTTCTTTCG
CCACCATCATCTCCTAGATCTGGAATCAAGAATCCTTTACTTGGTGATGATAACGTGGAG
GCGGGGAAAAGCAACAGTAAAGAAATTGATGCGCGCCCCGTGAGCTATTCATATACATTT
TTTCACGTTATCTTTGCTCTTGCAAGTATGTATTCAGCCATGCTTCTGACTGGCTGGACG
AGCGCTGCTTCAGACAGCTCGGAGCTGATGGATGTTGGATGGACAACTGTTTGGGTTCGC
ATCTGCACTGAGTGGGCTACGGCTGCATTGTACATCTGGACCCTTGTTGCTCCCCTGCTA
TTTCCAGACCGGGACTTCTCATAGGCATGTCAAGCATTGTTAAAAACGTGGTTAAACCAT
GAAATTATATATATATATATGTTTGTGTGTGTGTATGTACGTACGTACGTACGTACGTAC
GTACGTACGTTATTCGTTGTGGGAAGCCAGTAGTTATGTATAAAGTCCTTATTGACATGT
ACGCCCTCCCGTTTTTTTAAATATTTAATGCAATTTGATTTTTGGACAAAAAAAAGA

consensusID : consensus_9729#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1145
fasta sequence

                              [ATCCCATGGATAAATACGTTTGATTATACACAACCGGATGAATGGTTTCAAATGAATGCTGTTCTTCGTGTCAGCCTTGGGAACTTCTTGTTTTTTGCAATATTTGCTCTGATGATGATTGGTGTCAAAGACCAAAATGACCGGCGTGATGCATGGCACCATGGTGGCTGGATTGCAAAAATTGTTGTCTGGGTTGTTCTCATCGTTCTTATGTTCTGTGTGCCGAACGTTGTTATTACTATTTATGAGGTACTGTCAAAATTTGGATCCGGCTTGTTTCTTCTGGTGCAGGTCGTGATGCTTTTAGACTTCACAAACAATTGGAATGACTCATGGATTGAGAAGGATGAGCAAAAGTGGGAAATTGCTTTGTTGGTAGTAACTGTGGTTTGCTATCTCTCTACATTTGCCTTCTCTGGTTTGCTCTTCACGTGGTTCAATCCCTCTGGTCATGATTGTGGTCTCAATGTGTTCTTCATTACCATGACCATTATTCTTGCTTTTGCATTCGCCATAATTGCGTTGCACCCCCAGGTCAATGGAAGTGTTATGCCTGCTTCTGTTATTTCAGTTTACTGTGCATACCTGTGTTACACTAGTCTCTCGAGTGAACCAGATGACTATGCATGCAACGGACTTCACAGACACTCTAAGCAGGTTTCAATGAGCGCTCTTATACTCGGGATGCTCACAACTGTTCTCTCTGTCGTGTACTCTGCTGTTCGTGCTGGATCTTCCACTACATTTCTTTCGCCACCATCATCTCCTAGATCTGCCATGCTTCTGACTGGCTGGACGAGCGCTGCTTCAGACAGCTCGGAGCTGATGGATGTTGGATGGACAACTGTTTGGGTTCGCATCTGCACTGAGTGGGCTACGGCTGCATTGTACATCTGGACCCTTGTTGCTCCCCTGCTATTTCCAGACCGGGACTTCTCATAGGCATGTCAAGCATTGTTAAAAACGTGGTTAAACCATGAAATTATATATATATATATGTTTGTGTGTGTGTATGTACGTACGTACGTACGTACGTACGTACGTACGTTATTCGTTGTGGGAAGCCAGTAGTTATGTATAAAGTCCTTATTGACATGTACGCCCTCCCGTTTTTTTAAATATTTAATGCAATTTGATTTTTGGAC]

[+] EMBL CB666036             [ATCCCATGGATAAATACGTTTGATTATACACAACCGGATGAATGGTTTCAAATGAATGCTGTTCTTCGTGTCAGCCTTGGGAACTTCTTGTTTTTTGCAATATTTGCTCTGATGATGATTGGTGTCAAAGACCAAAATGACCGGCGTGATGCATGGCACCATGGTGGCTGGATTGCAAAAATTGTTGTCTGGGTTGTTCTCATCGTTCTTATGTTCTGTGTGCCGAACGTTGTTATTACTATTTATGAGGTACTGTCAAAATTTGGATCCGGCTTGTTTCTTCTGGTGCAGGTCGTGATGCTTTTAGACTTCACAAACAATTGGAATGACTCATGGATTGAGAAGGATGAGCAAAAGTGGGAAATTGCTTTGTTGGTAGTAACTGTGGTTTGCTATCTCTCTACATTTGCCTTCTCTGGTTTGCTCTTCACGTGGTTCAATCCCTCTGGTCATGATTGTGGTCTCAATGTGTTCTTCATTACCATGACCATTATTCTTGCTTTTGCATTCGCCATAATTGCGTTGCACCCCCAGGTCAATGGAAGTGTTATGCCTGCTTCTGTTATTTCAGTTTACTGTGCATACCTGTGTTACACTAGTCTCTCGAGTGAACCAGATGACTATGCATGCAACGGACTTCACAGACACTCTAAGCAGGTTTCAATGAGCGCTCTTATACTCGGGATGCTCACAACTGTTCTCTCTGTCGTGTACTCTGCTGTTCGTGCTGGATCTTCCACTACATTTCTTTCGCCACCATCATCTCCTAGATCTGCCATGCTTCTGACTGGCTGGACGAGCGCTGCTTCAGACAGCTCG                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CB666037             [                                                                                                                                                                                                                                                                                                                                      TGACTCATGGATTGAGAAGGATGAGCAAAAGTGGGAAATTGCTTTGTTGGTAGTAACTGTGGTTTGCTATCTCTCTACATTTGCCTTCTCTGGTTTGCTCTTCACGTGGTTCAATCCCTCTGGTCATGATTGTGGTCTCAATGTGTTCTTCATTACCATGACCATTATTCTTGCTTTTGCATTCGCCATAATTGCGTTGCACCCCCAGGTCAATGGAAGTGTTATGCCTGCTTCTGTTATTTCAGTTTACTGTGCATACCTGTGTTACACTAGTCTCTCGAGTGAACCAGATGACTATGCATGCAACGGACTTCACAGACACTCTAAGCAGGTTTCAATGAGCGCTCTTATACTCGGGATGCTCACAACTGTTCTCTCTGTCGTGTACTCTGCTGTTCGTGCTGGATCTTCCACTACATTTCTTTCGCCACCATCATCTCCTAGATCTGCCATGCTTCTGACTGGCTGGACGAGCGCTGCTTCAGACAGCTCGGAGCTGATGGATGTTGGATGGACAACTGTTTGGGTTCGCATCTGCACTGAGTGGGCTACGGCTGCATTGTACATCTGGACCCTTGTTGCTCCCCTGCTATTTCCAGACCGGGACTTCTCATAGGCATGTCAAGCATTGTTAAAAACGTGGTTAAACCATGAAATTATATATATATATATGTTTGTGTGTGTGTATGTACGTACGTACGTACGTACGTACGTACGTACGTTATTCGTTGTGGGAAGCCAGTAGTTATGTATAAAGTCCTTATTGACATGTACGCCCTCCCGTTTTTTTAAATATTTAATGCAATTTGATTTTTGGAC]




>consensus_9729#1
ATCCCATGGATAAATACGTTTGATTATACACAACCGGATGAATGGTTTCAAATGAATGCT
GTTCTTCGTGTCAGCCTTGGGAACTTCTTGTTTTTTGCAATATTTGCTCTGATGATGATT
GGTGTCAAAGACCAAAATGACCGGCGTGATGCATGGCACCATGGTGGCTGGATTGCAAAA
ATTGTTGTCTGGGTTGTTCTCATCGTTCTTATGTTCTGTGTGCCGAACGTTGTTATTACT
ATTTATGAGGTACTGTCAAAATTTGGATCCGGCTTGTTTCTTCTGGTGCAGGTCGTGATG
CTTTTAGACTTCACAAACAATTGGAATGACTCATGGATTGAGAAGGATGAGCAAAAGTGG
GAAATTGCTTTGTTGGTAGTAACTGTGGTTTGCTATCTCTCTACATTTGCCTTCTCTGGT
TTGCTCTTCACGTGGTTCAATCCCTCTGGTCATGATTGTGGTCTCAATGTGTTCTTCATT
ACCATGACCATTATTCTTGCTTTTGCATTCGCCATAATTGCGTTGCACCCCCAGGTCAAT
GGAAGTGTTATGCCTGCTTCTGTTATTTCAGTTTACTGTGCATACCTGTGTTACACTAGT
CTCTCGAGTGAACCAGATGACTATGCATGCAACGGACTTCACAGACACTCTAAGCAGGTT
TCAATGAGCGCTCTTATACTCGGGATGCTCACAACTGTTCTCTCTGTCGTGTACTCTGCT
GTTCGTGCTGGATCTTCCACTACATTTCTTTCGCCACCATCATCTCCTAGATCTGCCATG
CTTCTGACTGGCTGGACGAGCGCTGCTTCAGACAGCTCGGAGCTGATGGATGTTGGATGG
ACAACTGTTTGGGTTCGCATCTGCACTGAGTGGGCTACGGCTGCATTGTACATCTGGACC
CTTGTTGCTCCCCTGCTATTTCCAGACCGGGACTTCTCATAGGCATGTCAAGCATTGTTA
AAAACGTGGTTAAACCATGAAATTATATATATATATATGTTTGTGTGTGTGTATGTACGT
ACGTACGTACGTACGTACGTACGTACGTTATTCGTTGTGGGAAGCCAGTAGTTATGTATA
AAGTCCTTATTGACATGTACGCCCTCCCGTTTTTTTAAATATTTAATGCAATTTGATTTT
TGGAC

consensusID : consensus_9729#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 475
fasta sequence

                              [AACTGGTATACCCCTGCCAAGGGTACCCGGTCCCGGAATTCCCCGGGGTGTCGACCCACCGGCGGTCCCTCGTCAACCAATGGCTTTCCTGGACCTGGGCTTGGACCGAAGCTCCTGGCTTCAAACAAGCTCCGGACTTGTATGGATTTGGATGGACAACGTGTTGTGGGTTCGCATCTTGCCACCTGAGTGGCGTACGGCGTGCATTTGTACACTCGTGGACCCTTGTTGCTCCCCGGCTATTTTCCACGACCGGGACTTCTCATAGGCCATGGTCAAAGCATTGTTTAAAAACGTGGTTAAACCACTGAAATGTATATATATATATTTTGTTTGTTGTATGTACGTACGTACGTACGTACGTACGTTATTCGTTGTGGGAACCAGTAGTTATGTATAAAGTCCTTATTGACATGTACGCCCTCCCGTTTTTTTAAATATTTAATCAATTTGATTTTGGGACAAACGTTAAAAA]

[+] EMBL BI801666             [AACTGGTATACCCCTGCCAAGGGTACCCGGTCCCGGAATTCCCCGGGGTGTCGACCCACCGGCGGTCCCTCGTCAACCAATGGCTTTCCTGGACCTGGGCTTGGACCGAAGCTCCTGGCTTCAAACAAGCTCCGGACTTGTATGGATTTGGATGGACAACGTGTTGTGGGTTCGCATCTTGCCACCTGAGTGGCGTACGGCGTGCATTTGTACACTCGTGGACCCTTGTTGCTCCCCGGCTATTTTCCACGACCGGGACTTCTCATAGGCCATGGTCAAAGCATTGTTTAAAAACGTGGTTAAACCACTGAAATGTATATATATATATTTTGTTTGTTGTATGTACGTACGTACGTACGTACGTACGTTATTCGTTGTGGGAACCAGTAGTTATGTATAAAGTCCTTATTGACATGTACGCCCTCCCGTTTTTTTAAATATTTAATCAATTTGATTTTGGGACAAACGTTAAAAA]




>consensus_9729#2
AACTGGTATACCCCTGCCAAGGGTACCCGGTCCCGGAATTCCCCGGGGTGTCGACCCACC
GGCGGTCCCTCGTCAACCAATGGCTTTCCTGGACCTGGGCTTGGACCGAAGCTCCTGGCT
TCAAACAAGCTCCGGACTTGTATGGATTTGGATGGACAACGTGTTGTGGGTTCGCATCTT
GCCACCTGAGTGGCGTACGGCGTGCATTTGTACACTCGTGGACCCTTGTTGCTCCCCGGC
TATTTTCCACGACCGGGACTTCTCATAGGCCATGGTCAAAGCATTGTTTAAAAACGTGGT
TAAACCACTGAAATGTATATATATATATTTTGTTTGTTGTATGTACGTACGTACGTACGT
ACGTACGTTATTCGTTGTGGGAACCAGTAGTTATGTATAAAGTCCTTATTGACATGTACG
CCCTCCCGTTTTTTTAAATATTTAATCAATTTGATTTTGGGACAAACGTTAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9729#0      AGCCGCCGGGGCACCGGAGATTAGGAGGACATGTGGTGCGCCTCGTGCCTGGCGTCCGCC 60
consensus_9729#1      ------------------------------------------------------------
consensus_9729#2      ------------------------------------------------------------
                                                                                  

consensus_9729#0      TGCGCGGGCTGCACCTGCAACCTGTGCGCGTCAGCGTTGTCCGCCATCTCCCGCCGCTCC 120
consensus_9729#1      ------------------------------------------------------------
consensus_9729#2      ------------------------------------------------------------
                                                                                  

consensus_9729#0      GCTCGCCTCGCCTATTGCGGCCTCTTCGCGGCCTCCCTAATACTCTCCTTCCTCATGCGC 180
consensus_9729#1      ------------------------------------------------------------
consensus_9729#2      ------------------------------------------------------------
                                                                                  

consensus_9729#0      CAGTTCGCCACGCCTCTCCTCAAGCAAATCCCATGGATAAATACGTTTGATTATACACAA 240
consensus_9729#1      ---------------------------ATCCCATGGATAAATACGTTTGATTATACACAA 33
consensus_9729#2      ------------------------------------------------------------
                                                                                  

consensus_9729#0      CCGGATGAATGGTTTCAAATGAATGCTGTTCTTCGTGTCAGCCTTGGGAACTTCTTGTTT 300
consensus_9729#1      CCGGATGAATGGTTTCAAATGAATGCTGTTCTTCGTGTCAGCCTTGGGAACTTCTTGTTT 93
consensus_9729#2      ------------------------------------------------------------
                                                                                  

consensus_9729#0      TTTGCAATATTTGCTCTGATGATGATTGGTGTCAAAGACCAAAATGACCGGCGTGATGCA 360
consensus_9729#1      TTTGCAATATTTGCTCTGATGATGATTGGTGTCAAAGACCAAAATGACCGGCGTGATGCA 153
consensus_9729#2      ------------------------------------------------------------
                                                                                  

consensus_9729#0      TGGCACCATGGTGGCTGGATTGCAAAAATTGTTGTCTGGGTTGTTCTCATCGTTCTTATG 420
consensus_9729#1      TGGCACCATGGTGGCTGGATTGCAAAAATTGTTGTCTGGGTTGTTCTCATCGTTCTTATG 213
consensus_9729#2      ------------------------------------------------------------
                                                                                  

consensus_9729#0      TTCTGTGTGCCGAACGTTGTTATTACTATTTATGAGGTACTGTCAAAATTTGGATCCGGC 480
consensus_9729#1      TTCTGTGTGCCGAACGTTGTTATTACTATTTATGAGGTACTGTCAAAATTTGGATCCGGC 273
consensus_9729#2      ------------------------------------------------------------
                                                                                  

consensus_9729#0      TTGTTTCTTCTGGTGCAGGTCGTGATGCTTTTAGACTTCACAAACAATTGGAATGACTCA 540
consensus_9729#1      TTGTTTCTTCTGGTGCAGGTCGTGATGCTTTTAGACTTCACAAACAATTGGAATGACTCA 333
consensus_9729#2      ------------------------------------------------------------
                                                                                  

consensus_9729#0      TGGATTGAGAAGGATGAGCAAAAGTGGGAAATTGCTTTGTTGGTAGTAACTGTGGTTTGC 600
consensus_9729#1      TGGATTGAGAAGGATGAGCAAAAGTGGGAAATTGCTTTGTTGGTAGTAACTGTGGTTTGC 393
consensus_9729#2      ------------------------------------------------------------
                                                                                  

consensus_9729#0      TATCTCTCTACATTTGCCTTCTCTGGTTTGCTCTTCACGTGGTTCAATCCCTCTGGTCAT 660
consensus_9729#1      TATCTCTCTACATTTGCCTTCTCTGGTTTGCTCTTCACGTGGTTCAATCCCTCTGGTCAT 453
consensus_9729#2      ------------------------------------------------------------
                                                                                  

consensus_9729#0      GATTGTGGTCTCAATGTGTTCTTCATTACCATGACCATTATTCTTGCTTTTGCATTCGCC 720
consensus_9729#1      GATTGTGGTCTCAATGTGTTCTTCATTACCATGACCATTATTCTTGCTTTTGCATTCGCC 513
consensus_9729#2      ------------------------------------------------------------
                                                                                  

consensus_9729#0      ATAATTGCGTTGCACCCCCAGGTCAATGGAAGTGTTATGCCTGCTTCTGTTATTTCAGTT 780
consensus_9729#1      ATAATTGCGTTGCACCCCCAGGTCAATGGAAGTGTTATGCCTGCTTCTGTTATTTCAGTT 573
consensus_9729#2      ------------------------------------------------------------
                                                                                  

consensus_9729#0      TACTGTGCATACCTGTGTTACACTAGTCTCTCGAGTGAACCAGATGACTATGCATGCAAC 840
consensus_9729#1      TACTGTGCATACCTGTGTTACACTAGTCTCTCGAGTGAACCAGATGACTATGCATGCAAC 633
consensus_9729#2      ------------------------------------------------------------
                                                                                  

consensus_9729#0      GGACTTCACAGACACTCTAAGCAGGTTTCAATGAGCGCTCTTATACTCGGGATGCTCACA 900
consensus_9729#1      GGACTTCACAGACACTCTAAGCAGGTTTCAATGAGCGCTCTTATACTCGGGATGCTCACA 693
consensus_9729#2      --------------------------------------------AACTGGTATACCCCTG 16
                                                                  *   ** ** * *   

consensus_9729#0      ACTGTTCT-CTCTGTCGTGTACTCTGCTGTTCGTGCTGGATCTTCCACTACATTTCTTTC 959
consensus_9729#1      ACTGTTCT-CTCTGTCGTGTACTCTGCTGTTCGTGCTGGATCTTCCACTACATTTCTTTC 752
consensus_9729#2      CCAAGGGTACCCGGTCCCGGAATTCCCCGGG-GTGTCGACCCACCGGCGGTCCCTCGTCA 75
                       *     * * * ***  * * *   * *   ***  *   *  *  *      ** *  

consensus_9729#0      GCCACCATCATCTCCTAGATCTGGAATCAAGAATCCTTTACTTGGTGATGATAACGTGGA 1019
consensus_9729#1      GCCACCATCATCTCCTAGATCTG------------------------------------- 775
consensus_9729#2      ACCAATGGC-TTTCCTGGACCTGG------------------------------------ 98
                       ***    * * **** ** ***                                     

consensus_9729#0      GGCGGGGAAAAGCAACAGTAAAGAAATTGATGCGCGCCCCGTGAGCTATTCATATACATT 1079
consensus_9729#1      ------------------------------------------------------------
consensus_9729#2      ------------------------------------------------------------
                                                                                  

consensus_9729#0      TTTTCACGTTATCTTTGCTCTTGCAAGTATGTATTCAGCCATGCTTCTGACTGGCTGGAC 1139
consensus_9729#1      --------------------------------------CCATGCTTCTGACTGGCTGGAC 797
consensus_9729#2      ------------------------------------------------GCTTGGACCGAA 110
                                                                      *  ***   ** 

consensus_9729#0      GAGCGCTGCTTCAGACAG--CTCGGAGCTG-ATGGATGTTGGATGGACAAC-TGTT-TGG 1194
consensus_9729#1      GAGCGCTGCTTCAGACAG--CTCGGAGCTG-ATGGATGTTGGATGGACAAC-TGTT-TGG 852
consensus_9729#2      GCTCCTGGCTTCAAACAAGCTCCGGACTTGTATGGAT-TTGGATGGACAACGTGTTGTGG 169
                      *  *   ****** ***     ****  ** ****** ************* **** ***

consensus_9729#0      GTTCGCATCT-GCA--CTGAGTGGGCTACGGC-TGCATT-GTACATC--TGGACCCTTGT 1247
consensus_9729#1      GTTCGCATCT-GCA--CTGAGTGGGCTACGGC-TGCATT-GTACATC--TGGACCCTTGT 905
consensus_9729#2      GTTCGCATCTTGCCACCTGAGTGGCGTACGGCGTGCATTTGTACACTCGTGGACCCTTGT 229
                      ********** **   ********  ****** ****** *****    ***********

consensus_9729#0      TGCTCCCCTGCTATTTCCA--GACCGGGACTTCTCATAGGC-ATGTC--AAGCATTGTT- 1301
consensus_9729#1      TGCTCCCCTGCTATTTCCA--GACCGGGACTTCTCATAGGC-ATGTC--AAGCATTGTT- 959
consensus_9729#2      TGCTCCCCGGCTATTTTCCACGACCGGGACTTCTCATAGGCCATGGTCAAAGCATTGTTT 289
                      ******** ******* *   ******************** ***    ********** 

consensus_9729#0      AAAAACGTGGTTAAACCATGAAATTATATATATATATATGTTTGTGTGTGTGTATGTACG 1361
consensus_9729#1      AAAAACGTGGTTAAACCATGAAATTATATATATATATATGTTTGTGTGTGTGTATGTACG 1019
consensus_9729#2      AAAAACGTGGTTAAACCACTGAAATGTATATATATATAT-TTTGTTTGT---------TG 339
                      ******************   ** * ************* ***** ***          *

consensus_9729#0      TACGTACGTACGTACGTACGTACGTACGTTATTCGTTGTGGGAAGCCAGTAGTTATGTAT 1421
consensus_9729#1      TACGTACGTACGTACGTACGTACGTACGTTATTCGTTGTGGGAAGCCAGTAGTTATGTAT 1079
consensus_9729#2      TATGTACGTACGTACGTACGTACGTACGTTATTCGTTGTGGGAA-CCAGTAGTTATGTAT 398
                      ** ***************************************** ***************

consensus_9729#0      AAAGTCCTTATTGACATGTACGCCCTCCCGTTTTTTTAAATATTTAATGCAATTTGATTT 1481
consensus_9729#1      AAAGTCCTTATTGACATGTACGCCCTCCCGTTTTTTTAAATATTTAATGCAATTTGATTT 1139
consensus_9729#2      AAAGTCCTTATTGACATGTACGCCCTCCCGTTTTTTTAAATATTTAAT-CAATTTGATTT 457
                      ************************************************ ***********

consensus_9729#0      TTGGACAAAAAAAAGA-- 1497
consensus_9729#1      TTGGAC------------ 1145
consensus_9729#2      TGGGACAAACGTTAAAAA 475
                      * ****