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Oryza sativa
cluster # 9747 cluster # 9747       Sequences # 6       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9747#0 length = 1792 sequences # 5  
consensus_9747#1 length = 1151 sequences # 1  

consensusID : consensus_9747#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1792
fasta sequence
                              [TCGATTCGCGCTCTAGCTCTAGCTTTTCTCTCTTCTTTCTTGGGCTGGCTATCTATAGCTTGCTCGCTGTCGATCATGGCGAGCCGCTCTGGTGATCGGAGGCTGGCCGTGGTTGCGTTCGCGGCGGCGGTGTTGCTGTCGGCGGCGGAGGGGCTCGGGGTGAACTGGGGCACGATGGCGTCGCACCCGCTGCCGCCGAGGGCGGTGGTGCGGATGCTGCAGGACAATGGGATCAGCAAGGTGAAGCTGTTCGACGCCGACGCCGGGACGATGGAGGCGCTCGCCGGCAGCGGCGTCGAGGTGATGGTGGCCATCCCAAACAACCTGCTCGACCTGCTGACGGACTACGACGCGGCCAGGGACTGGGTGCACGAGAACGTCAGCCGTTACAGCTTCGACGGCGGCGTCAATATCAAATATGTTGCCGTCGGGAACGAGCCATTCCTGTCGTCTTTGAATGGCACGTTCCTGAACGTGACCTTCCCTGCTCTGCAGAACATCCAGCGAGCCCTCTACGACGCCGGCCACGGCGACACCATCAAGGCCACCGTGCCGCTGAACGCCGACGTGTACAACTCGCCGGAGAACATGCAGGTGCCGTCGGCGGGGAGGTTCCGGCCGGACATCGCCGGGCTGATGACGGAGATCGTGCAGTTCCTGAACCAGAGCGGCGCGCCCTTCACCGTCAACATCTACCCCTTCCTGAGCCTGTACGGCAACGACAACTTCCCGCTCGACTACGCCTTCTTCGACGGCACGACCAGCCCCGTCGTCGACACCAACGGCATCCAGTACACCAACGTGTTCGACGCCAACTTCGACACGCTCGTGTCGGCGCTGGTCGCCGCCGGCGTCGGGGGCCTCCCCGTCGTCGTCGGCGAGGTCGGGTGGCCAACCGACGGCGACAAGCACGCCAGGGCGGACCTCGCGCAGCGGTTCTACGCCGGGCTGCTCCGGAAGCTGGCGTCCAACGCCGGGACGCCGCTGCGGCCGAACCAGTACGTGGAGGTGTACCTGTTCAGCCTCGTCGACGAGGACGCCAAGAGCGTGGCGCCGGGCAACTTCGAGCGCCACTGGGGCATCCTCCGGTACGACGGCCAGCCCAAGTACTCCATGGACCTCGCAGGGCAGGGTCGGGACACGGCGCTCGTGGCGGCGCGCGGCGTCGCCTACCTCCCGCGCGCGTGGTGCGTGCTCAACCCGAGC-GCCACGCCGGACGCCATGAGCAGGGTCGGCGACAACGTCAACTACGCCTGCACGTACGCCGAC-TGCACCTCGCTGGGCTAC-GGCTCGAC-GTGCAAC-GGCATGGACGCCGCCGGCAACGCCTCCTACGCCTTCAACGCCTACTTCCAGGTGCAGAACCAGGTGGAGGAGTCGTGCGGTTTCCAGGGCCTCGCCGTGCAGACGCAGCAGGACCCGTCCACGAACGCCTGCAACTTCACCATACAGATCGAGCCGTCTGCGGCCGCCGGCCGACGGCCGGCGGCGGTGGCCGTGACGGTGGCGACGGCCATGCTGATCTCGGTTCTCGCCGCCATGGTCACGACGCCCTGATTGGCGTGAGGACATAGTTACATTTGTAGAGGTTTTCTGCTTGATTTTGTAGATACTTTGGTGTTGCCTATACAGCGATTGATCGATACACGCTCGTTTGGTCGTTTCGATGTCTAACTGGGTGGCTGAAATTTCGGCCCATGAAGTAGATGGGCTTGTAAGTTGGAAACAAATTACGGCCCATTTATATATGGATATGGGCCGGTTTCTGTGACGGCCCGCGTAGCTTCGGAGGAAG]

[+] EMBL AK069506             [TCGATTCGCGCTCTAGCTCTAGCTTTTCTCTCTTCTTTCTTGGGCTGGCTATCTATAGCTTGCTCGCTGTCGATCATGGCGAGCCGCTCTGGTGATCGGAGGCTGGCCGTGGTTGCGTTCGCGGCGGCGGTGTTGCTGTCGGCGGCGGAGGGGCTCGGGGTGAACTGGGGCACGATGGCGTCGCACCCGCTGCCGCCGAGGGCGGTGGTGCGGATGCTGCAGGACAATGGGATCAGCAAGGTGAAGCTGTTCGACGCCGACGCCGGGACGATGGAGGCGCTCGCCGGCAGCGGCGTCGAGGTGATGGTGGCCATCCCAAACAACCTGCTCGACCTGCTGACGGACTACGACGCGGCCAGGGACTGGGTGCACGAGAACGTCAGCCGTTACAGCTTCGACGGCGGCGTCAATATCAAATATGTTGCCGTCGGGAACGAGCCATTCCTGTCGTCTTTGAATGGCACGTTCCTGAACGTGACCTTCCCTGCTCTGCAGAACATCCAGCGAGCCCTCTACGACGCCGGCCACGGCGACACCATCAAGGCCACCGTGCCGCTGAACGCCGACGTGTACAACTCGCCGGAGAACATGCAGGTGCCGTCGGCGGGGAGGTTCCGGCCGGACATCGCCGGGCTGATGACGGAGATCGTGCAGTTCCTGAACCAGAGCGGCGCGCCCTTCACCGTCAACATCTACCCCTTCCTGAGCCTGTACGGCAACGACAACTTCCCGCTCGACTACGCCTTCTTCGACGGCACGACCAGCCCCGTCGTCGACACCAACGGCATCCAGTACACCAACGTGTTCGACGCCAACTTCGACACGCTCGTGTCGGCGCTGGTCGCCGCCGGCGTCGGGGGCCTCCCCGTCGTCGTCGGCGAGGTCGGGTGGCCAACCGACGGCGACAAGCACGCCAGGGCGGACCTCGCGCAGCGGTTCTACGCCGGGCTGCTCCGGAAGCTGGCGTCCAACGCCGGGACGCCGCTGCGGCCGAACCAGTACGTGGAGGTGTACCTGTTCAGCCTCGTCGACGAGGACGCCAAGAGCGTGGCGCCGGGCAACTTCGAGCGCCACTGGGGCATCCTCCGGTACGACGGCCAGCCCAAGTACTCCATGGACCTCGCAGGGCAGGGTCGGGACACGGCGCTCGTGGCGGCGCGCGGCGTCGCCTACCTCCCGCGCGCGTGGTGCGTGCTCAACCCGAGC GCCACGCCGGACGCCATGAGCAGGGTCGGCGACAACGTCAACTACGCCTGCACGTACGCCGAC TGCACCTCGCTGGGCTAC GGCTCGAC GTGCAAC GGCATGGACGCCGCCGGCAACGCCTCCTACGCCTTCAACGCCTACTTCCAGGTGCAGAACCAGGTGGAGGAGTCGTGCGGTTTCCAGGGCCTCGCCGTGCAGACGCAGCAGGACCCGTCCACGAACGCCTGCAACTTCACCATACAGATCGAGCCGTCTGCGGCCGCCGGCCGACGGCCGGCGGCGGTGGCCGTGACGGTGGCGACGGCCATGCTGATCTCGGTTCTCGCCGCCATGGTCACGACGCCCTGATTGGCGTGAGGACATAGTTACATTTGTAGAGGTTTTCTGCTTGATTTTGTAGATACTTTGGTGTTGCCTATACAGCGATTGATCGATACACGCTCGTTTGGTCGTTTCGATGTCTAACTGGGTGGCTGAAATTTCGGCCCATGAAGTAGATGGGCTTGTAAGTTGGAAACAAATTACGGCCCATTTATATATGGATATGGGCCGGTTTCTGTGACGGCCCGCGTAGCTTCGGAGGAAG]
[+] EMBL CB638567             [                                               GCTATCTATAGCTTGCTCGCTGTCGATCATGGCGAGCCGCTCTGGTGATCGGAGGCTGGCCGTGGTTGCGTTCGCGGCGGCGGTGTTGCTGTCGGCGGCGGAGGGGCTCGGGGTGAACTGGGGCACGATGGCGTCGCACCCGCTGCCGCCGAGGGCGGTGGTGCGGATGCTGCAGGACAATGGGATCAGCAAGGTGAAGCTGTTCGACGCCGACGCCGGGACGATGGAGGCGCTCGCCGGCAGCGGCGTCGAGGTGATGGTGGCCATCCCAAACAACCTGCTCGACCTGCTGACGGACTACGACGCGGCCAGGGACTGGGTGCACGAGAACGTCAGCCGTTACAGCTTCGACGGCGGCGTCAATATCAAATATGTTGCCGTCGGGAACGAGCCATTCCTGTCGTCTTTGAATGGCACGTTCCTGAACGTGACCTTCCCTGCTCTGCAGAACATCCAGCGAGCCCTCTACGACGCCGGCCACGGCGACACCATCAAGGCCACCGTGCCGCTGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CA755833             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GCAGC GTTCTACGCCGGGCTGCTCCGGAAGCTGGCGTCCAACGCCGGGACGCCGCTGCGGCCGAACCAGTACGTGGAGGTGTACCTGTTCAGCCTCGTCGACGAGGACGCCAAGAGCGTGGCGCCGGGCAACTTCGAGCGCCACTGGGGCATCCTCCGGTACGACGGCCAGCCCAAGTACTCCATGGACCTCGCAGGGCAGGGCCGGGACACGGCGCTCGTGGCGGCGCGCGGCGTCGCCTACCTCCCGCGCGCGTGGTGCGTGCTCAACCCGAGC GCCACGCCGGACGCCATGAGCAGGGTCGGCGACAACGTCAACTACGCCTGCACGTACGCCGAC TGCACCTCGCTGGGCTAC GGCTCGAC GTGCAAC GGCATGGACGCCGCCGGCAACGCCTCCTACGCCTTCAACGCCTACTTCCAGGTGCAGAACCAGGTGGAGGAGTCGTGCGGTTTCCAGGGCCTCGCCGTGCAGACGCAGCAGGACCCGTCCACGAACGCCTGCAACTTCACCATACAGATCGAGCCGTCTGCGGCCGCCGGCCGACGGCCGGCGGCGGTGGCCGTGACGGTGGCGACGGCCATGCTGATCTCGGTTCTCGCCGCCAT                                                                                                                                                                                                                                                              ]
[+] EMBL BI808073             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CCCGCGCGCTTGGTGCGTGCTCAACCCGAGCAGCCACGCCGGACGCCATGAGCAGGGTCGGCGACAACGTCAACTACGCCTGCACGTACGCCGACATGCACCTCGCTGGGCTACAGGCTCGACAGTGCAACAGGCATGGACGCCGCCGGCAACGCCTCCTACGCCTTCAACGCCTACTTCCAGGTGCAGAACCAGGTGGAGGAGTCGTGCGGTTTCCAGGGCCTCGCCGTGCAGACGCAGCAGGACCCGTCCACGAACGCCTGCAACTTCACCATACAGATCGAGCCGTCTGC GCCGCtctag                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CB638568             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GAGC GCCACGCTGGACGCCATGAGCAGGGTCGGCGACAACGTCAANTACGCTTGCACGTACGCCGAC TGCACCTCGCTGGGCTAC GGCTCGAC GTGCAAC GGCATGGACGCCGCCGGCAACGCTTCTTACGCCTTCAACGCCTACTTCCAGGTGCAGAACCAGGTGGAGGAGTCGTGCGGTTTCCAGGGCCTCGCCGTGCAGACGCAGCAGGACCCGTCCACGAACGCCTGCAACTTCACCATACAGATCGAGCCGTCTGCGGCCGCCGGCCGACGGCCGGCGGCGGTGGCCGTGACGGTGGCGACGGCCATGCTGATCTCGGTTCTCGCCGCCATGGTCACGACGCCCTGATTGGCGTGAGGACATAGTTACATTTGTAGAGGTTTTCTGCTTGATTTTGTAGATACTTTGGTGTTGCCTATACAGCGATTGATCGATACACGCTCGTTTGGTCGTTTCGATGTCTAACTGGGTGGCTGAAATTTCGGCCCATGAAGTAGATGGGCTTGTAAGTTGGAAACAAATTACGGCCCATTTATATATGGATATGGGCCGGTTTCTGTGACGGCCCGCGTAGCT          ]


>consensus_9747#0 TCGATTCGCGCTCTAGCTCTAGCTTTTCTCTCTTCTTTCTTGGGCTGGCTATCTATAGCT TGCTCGCTGTCGATCATGGCGAGCCGCTCTGGTGATCGGAGGCTGGCCGTGGTTGCGTTC GCGGCGGCGGTGTTGCTGTCGGCGGCGGAGGGGCTCGGGGTGAACTGGGGCACGATGGCG TCGCACCCGCTGCCGCCGAGGGCGGTGGTGCGGATGCTGCAGGACAATGGGATCAGCAAG GTGAAGCTGTTCGACGCCGACGCCGGGACGATGGAGGCGCTCGCCGGCAGCGGCGTCGAG GTGATGGTGGCCATCCCAAACAACCTGCTCGACCTGCTGACGGACTACGACGCGGCCAGG GACTGGGTGCACGAGAACGTCAGCCGTTACAGCTTCGACGGCGGCGTCAATATCAAATAT GTTGCCGTCGGGAACGAGCCATTCCTGTCGTCTTTGAATGGCACGTTCCTGAACGTGACC TTCCCTGCTCTGCAGAACATCCAGCGAGCCCTCTACGACGCCGGCCACGGCGACACCATC AAGGCCACCGTGCCGCTGAACGCCGACGTGTACAACTCGCCGGAGAACATGCAGGTGCCG TCGGCGGGGAGGTTCCGGCCGGACATCGCCGGGCTGATGACGGAGATCGTGCAGTTCCTG AACCAGAGCGGCGCGCCCTTCACCGTCAACATCTACCCCTTCCTGAGCCTGTACGGCAAC GACAACTTCCCGCTCGACTACGCCTTCTTCGACGGCACGACCAGCCCCGTCGTCGACACC AACGGCATCCAGTACACCAACGTGTTCGACGCCAACTTCGACACGCTCGTGTCGGCGCTG GTCGCCGCCGGCGTCGGGGGCCTCCCCGTCGTCGTCGGCGAGGTCGGGTGGCCAACCGAC GGCGACAAGCACGCCAGGGCGGACCTCGCGCAGCGGTTCTACGCCGGGCTGCTCCGGAAG CTGGCGTCCAACGCCGGGACGCCGCTGCGGCCGAACCAGTACGTGGAGGTGTACCTGTTC AGCCTCGTCGACGAGGACGCCAAGAGCGTGGCGCCGGGCAACTTCGAGCGCCACTGGGGC ATCCTCCGGTACGACGGCCAGCCCAAGTACTCCATGGACCTCGCAGGGCAGGGTCGGGAC ACGGCGCTCGTGGCGGCGCGCGGCGTCGCCTACCTCCCGCGCGCGTGGTGCGTGCTCAAC CCGAGCGCCACGCCGGACGCCATGAGCAGGGTCGGCGACAACGTCAACTACGCCTGCACG TACGCCGACTGCACCTCGCTGGGCTACGGCTCGACGTGCAACGGCATGGACGCCGCCGGC AACGCCTCCTACGCCTTCAACGCCTACTTCCAGGTGCAGAACCAGGTGGAGGAGTCGTGC GGTTTCCAGGGCCTCGCCGTGCAGACGCAGCAGGACCCGTCCACGAACGCCTGCAACTTC ACCATACAGATCGAGCCGTCTGCGGCCGCCGGCCGACGGCCGGCGGCGGTGGCCGTGACG GTGGCGACGGCCATGCTGATCTCGGTTCTCGCCGCCATGGTCACGACGCCCTGATTGGCG TGAGGACATAGTTACATTTGTAGAGGTTTTCTGCTTGATTTTGTAGATACTTTGGTGTTG CCTATACAGCGATTGATCGATACACGCTCGTTTGGTCGTTTCGATGTCTAACTGGGTGGC TGAAATTTCGGCCCATGAAGTAGATGGGCTTGTAAGTTGGAAACAAATTACGGCCCATTT ATATATGGATATGGGCCGGTTTCTGTGACGGCCCGCGTAGCTTCGGAGGAAG



consensusID : consensus_9747#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1151
fasta sequence
                              [TTCGCGCTCTAGCTCTAGCTTTTCTCTCTTCTTTCTTGGGCTGGCTATCTATAGCTTGCTCGCTGTCGATCATGGCGAGCCGCTCTGGTGATCGGAGGCTGGCCGTGGTTGCGTTCGCGGCGGCGGTGTTGCTGTCGGCGGCGGAGGGGCTCGGGGTGAACTGGGGCACGATGGCGTCGCACCCGCTGCCGCCGAGGGCGGTGGTGCGGATGCTGCAGGACAATGGGATCAGCAAGGTGAAGCTGTTCGACGCCGACGCCGGGACGATGGAGGCGCTCGCCGGCAGCGGCGTCGAGGTGATGGTGGCCATCCCAAACAACCTGCTCGACCTGCTGACGGACTACGACGCGGCCAGGGACTGGGTGCACGAGAACGTCAGCCGTTACAGCTTCGACGGCGGCGTCAATATCAAGTGAGTCCACGCACCACAGCTGCATGATGCCACCATGATCATCTCCTCCATCCATGGTTCAGATATTGAGATGCTCTGCATGGTGCAATCCTCCTTTTTTTTTCTTTTAAAGAAAAAAAAATCCTTCTTACATTCAGCTGTTGCTTCTTCAGGTGTCACATATTAGTTGTAGCTGTCAGAATTCGATAGGATTTGGATTGATGTGTTGCTCTTTTTCAAAATAGTTATTGAGTTTTTATTCTGATTATGATTATGACATACTTATATGTGCATATTAATTATCTTTGCCTCGTGCATAATTGGTCATGGTTCTGGTTCTATTATGCATTAATTCCAAAGTCCTTTTGAGCTGATCTTGAATAATGCTCTGGAGTAGTTTTTGAAGTGATTGATTACTATGGGGTGACGTGGATATTCTGCTGGCTGATTCGGAGAAGCTTTCTGATCAGTAAAGTGGCAACCTTAACATCAACAAGTTGAAAGTTAAAATTATGCATATGCGTCGCATTTGTCCAATTGTTCCGTCCAAACTCTGTCTGAAGAATATAGTAGTACTCTTTTAGGCATTATCTGATACTATATTTTCTTCGTCTAAAAAACCAACTTTTAAGGATAATCATCTTTAGAAGTTGATTTTTATTTGGGATCGAGGATGTATTAGGTGTTTAGATATTGACAAAAGATCTGAATATGATGTGTCATCAGTACTAGCGATCCTACAAGGATCATCCCTCTGAAT]

[+] EMBL AK064190             [TTCGCGCTCTAGCTCTAGCTTTTCTCTCTTCTTTCTTGGGCTGGCTATCTATAGCTTGCTCGCTGTCGATCATGGCGAGCCGCTCTGGTGATCGGAGGCTGGCCGTGGTTGCGTTCGCGGCGGCGGTGTTGCTGTCGGCGGCGGAGGGGCTCGGGGTGAACTGGGGCACGATGGCGTCGCACCCGCTGCCGCCGAGGGCGGTGGTGCGGATGCTGCAGGACAATGGGATCAGCAAGGTGAAGCTGTTCGACGCCGACGCCGGGACGATGGAGGCGCTCGCCGGCAGCGGCGTCGAGGTGATGGTGGCCATCCCAAACAACCTGCTCGACCTGCTGACGGACTACGACGCGGCCAGGGACTGGGTGCACGAGAACGTCAGCCGTTACAGCTTCGACGGCGGCGTCAATATCAAGTGAGTCCACGCACCACAGCTGCATGATGCCACCATGATCATCTCCTCCATCCATGGTTCAGATATTGAGATGCTCTGCATGGTGCAATCCTCCTTTTTTTTTCTTTTAAAGAAAAAAAAATCCTTCTTACATTCAGCTGTTGCTTCTTCAGGTGTCACATATTAGTTGTAGCTGTCAGAATTCGATAGGATTTGGATTGATGTGTTGCTCTTTTTCAAAATAGTTATTGAGTTTTTATTCTGATTATGATTATGACATACTTATATGTGCATATTAATTATCTTTGCCTCGTGCATAATTGGTCATGGTTCTGGTTCTATTATGCATTAATTCCAAAGTCCTTTTGAGCTGATCTTGAATAATGCTCTGGAGTAGTTTTTGAAGTGATTGATTACTATGGGGTGACGTGGATATTCTGCTGGCTGATTCGGAGAAGCTTTCTGATCAGTAAAGTGGCAACCTTAACATCAACAAGTTGAAAGTTAAAATTATGCATATGCGTCGCATTTGTCCAATTGTTCCGTCCAAACTCTGTCTGAAGAATATAGTAGTACTCTTTTAGGCATTATCTGATACTATATTTTCTTCGTCTAAAAAACCAACTTTTAAGGATAATCATCTTTAGAAGTTGATTTTTATTTGGGATCGAGGATGTATTAGGTGTTTAGATATTGACAAAAGATCTGAATATGATGTGTCATCAGTACTAGCGATCCTACAAGGATCATCCCTCTGAAT]


>consensus_9747#1 TTCGCGCTCTAGCTCTAGCTTTTCTCTCTTCTTTCTTGGGCTGGCTATCTATAGCTTGCT CGCTGTCGATCATGGCGAGCCGCTCTGGTGATCGGAGGCTGGCCGTGGTTGCGTTCGCGG CGGCGGTGTTGCTGTCGGCGGCGGAGGGGCTCGGGGTGAACTGGGGCACGATGGCGTCGC ACCCGCTGCCGCCGAGGGCGGTGGTGCGGATGCTGCAGGACAATGGGATCAGCAAGGTGA AGCTGTTCGACGCCGACGCCGGGACGATGGAGGCGCTCGCCGGCAGCGGCGTCGAGGTGA TGGTGGCCATCCCAAACAACCTGCTCGACCTGCTGACGGACTACGACGCGGCCAGGGACT GGGTGCACGAGAACGTCAGCCGTTACAGCTTCGACGGCGGCGTCAATATCAAGTGAGTCC ACGCACCACAGCTGCATGATGCCACCATGATCATCTCCTCCATCCATGGTTCAGATATTG AGATGCTCTGCATGGTGCAATCCTCCTTTTTTTTTCTTTTAAAGAAAAAAAAATCCTTCT TACATTCAGCTGTTGCTTCTTCAGGTGTCACATATTAGTTGTAGCTGTCAGAATTCGATA GGATTTGGATTGATGTGTTGCTCTTTTTCAAAATAGTTATTGAGTTTTTATTCTGATTAT GATTATGACATACTTATATGTGCATATTAATTATCTTTGCCTCGTGCATAATTGGTCATG GTTCTGGTTCTATTATGCATTAATTCCAAAGTCCTTTTGAGCTGATCTTGAATAATGCTC TGGAGTAGTTTTTGAAGTGATTGATTACTATGGGGTGACGTGGATATTCTGCTGGCTGAT TCGGAGAAGCTTTCTGATCAGTAAAGTGGCAACCTTAACATCAACAAGTTGAAAGTTAAA ATTATGCATATGCGTCGCATTTGTCCAATTGTTCCGTCCAAACTCTGTCTGAAGAATATA GTAGTACTCTTTTAGGCATTATCTGATACTATATTTTCTTCGTCTAAAAAACCAACTTTT AAGGATAATCATCTTTAGAAGTTGATTTTTATTTGGGATCGAGGATGTATTAGGTGTTTA GATATTGACAAAAGATCTGAATATGATGTGTCATCAGTACTAGCGATCCTACAAGGATCA TCCCTCTGAAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9747#0      TCGATTCGCGCTCTAGCTCTAGCTTTTCTCTCTTCTTTCTTGGGCTGGCTATCTATAGCT 60
consensus_9747#1      ----TTCGCGCTCTAGCTCTAGCTTTTCTCTCTTCTTTCTTGGGCTGGCTATCTATAGCT 56
                          ********************************************************

consensus_9747#0      TGCTCGCTGTCGATCATGGCGAGCCGCTCTGGTGATCGGAGGCTGGCCGTGGTTGCGTTC 120
consensus_9747#1      TGCTCGCTGTCGATCATGGCGAGCCGCTCTGGTGATCGGAGGCTGGCCGTGGTTGCGTTC 116
                      ************************************************************

consensus_9747#0      GCGGCGGCGGTGTTGCTGTCGGCGGCGGAGGGGCTCGGGGTGAACTGGGGCACGATGGCG 180
consensus_9747#1      GCGGCGGCGGTGTTGCTGTCGGCGGCGGAGGGGCTCGGGGTGAACTGGGGCACGATGGCG 176
                      ************************************************************

consensus_9747#0      TCGCACCCGCTGCCGCCGAGGGCGGTGGTGCGGATGCTGCAGGACAATGGGATCAGCAAG 240
consensus_9747#1      TCGCACCCGCTGCCGCCGAGGGCGGTGGTGCGGATGCTGCAGGACAATGGGATCAGCAAG 236
                      ************************************************************

consensus_9747#0      GTGAAGCTGTTCGACGCCGACGCCGGGACGATGGAGGCGCTCGCCGGCAGCGGCGTCGAG 300
consensus_9747#1      GTGAAGCTGTTCGACGCCGACGCCGGGACGATGGAGGCGCTCGCCGGCAGCGGCGTCGAG 296
                      ************************************************************

consensus_9747#0      GTGATGGTGGCCATCCCAAACAACCTGCTCGACCTGCTGACGGACTACGACGCGGCCAGG 360
consensus_9747#1      GTGATGGTGGCCATCCCAAACAACCTGCTCGACCTGCTGACGGACTACGACGCGGCCAGG 356
                      ************************************************************

consensus_9747#0      GACTGGGTGCACGAGAACGTCAGCCGTTACAGCTTCGACGGCGGCGTCAATATCAAATAT 420
consensus_9747#1      GACTGGGTGCACGAGAACGTCAGCCGTTACAGCTTCGACGGCGGCGTCAATATCAAGTGA 416
                      ******************************************************** *  

consensus_9747#0      GTTGCCGT-CGGGAACGAGCCATTCCTGTCGTCTTTGAATGGCACGTTCCTGAACGTGAC 479
consensus_9747#1      GTCCACGCACCACAGCTGCATGATGCCACCATGATCATCTCCTCCATCCATGGTTCAGAT 476
                      **   **  *   * *       * *   * *  *    *    * * * **     ** 

consensus_9747#0      CTTCCC-TGCTCTGCAGAACATCCAGCGAGCCCTCTACGACGCCGGCCACGGCGACACCA 538
consensus_9747#1      ATTGAGATGCTCTGCATGGTGCAATCCTCCTTTTTTTTTCTTTTAAAGAAAAAAAAATCC 536
                       **    *********          *      * *            *     * * * 

consensus_9747#0      TCAAGGCCACCGTGCCGCTGAACGCCGACGTGT-ACAACTCGCCGGAGAACATGCAGGTG 597
consensus_9747#1      TTCTTAC-ATTCAGCTGTTGCTTCTTCAGGTGTCACATATTAGTTGTAGCTGTCAGAATT 595
                      *     * *    ** * **       * **** ***  *     *      *     * 

consensus_9747#0      CCGTCGGCGGGGAGGTTCCG-GCCGGACATCGCCGGGCTGATGACGGAGATCGTGCAGTT 656
consensus_9747#1      CGATAGGATTTGGATTGATGTGTTGCTCTTTTTCAAAATAGTTATTGAGTTTTTA----T 651
                      *  * **    *   *   * *  *  * *   *    *  * *  *** *  *     *

consensus_9747#0      CCTGAACCAGAGCGGCGCGCCCTTCACCGTCAACATCTACCCCTTCCTGAGCCTGTACGG 716
consensus_9747#1      TCTGATTATGATTATGACATACTTATATGTGCATATTAATTATCTTTGCCTCGTGCATAA 711
                       ****    **      *   ***    **  * **  *     *      * ** *   

consensus_9747#0      CAACGACAACTTCCCGCTCGACTACGCCTTC-TTCGACGGCACGACCAGCCCCGTCGTCG 775
consensus_9747#1      TTGGTCATGGTTCTGGTTCTATTATGCATTAATTCCAAAGTCCTTTTGAGCTGATCTTGA 771
                                ***  * ** * ** ** **  *** *  *  *       *   ** *  

consensus_9747#0      ACACCAACGGCATCCAGTACACCAACGTGTTCGACGCCAACTTCGACACGCTCGTGTCGG 835
consensus_9747#1      ATAATGCTCTGGAGTAGTTT-TTGAAGTGATTGAT------TACTATGGGGTGACGTGGA 824
                      * *            ***      * *** * **       * * *   * *   ** * 

consensus_9747#0      CGCTGGTCGCCGCCGGCGTCGGGGGCCTCCCCGTCGTCGTCGGCGAGGTCGGGTGGCCAA 895
consensus_9747#1      TATT--CTGCTGGCTGATTCGGAGAAGCTTTC----TGATCAGTAAAGT--GGCAACC-- 874
                         *    ** * * *  **** *       *    *  ** *  * **  **   **  

consensus_9747#0      CCGACGGCGACAAGCACGCCAGGGCGGACCTCGCGCAGCGGTTCTACGCCGGGCTGCTCC 955
consensus_9747#1      TTAACATCAACAAGT---TGAAAGTTAAAATTATGCA-----TATGCGTCGCATTTGTCC 926
                         **  * *****      *  *   *  *   ***     * * ** **   *  ***

consensus_9747#0      GGAAGCTGGCGTCCAACGCCGGGACGCCGC-TGCGGCCGAACCAGTACGTGGAG-GTGTA 1013
consensus_9747#1      AATTGTTC-CGTCCAAACTCTGTCTGAAGAATATAGTAGTACTCTTTTAGGCATTATCTG 985
                          * *  *******   * *   *  *  *   *  * **   *    * *   * * 

consensus_9747#0      CCTGTTCAGCCTCGTCGACGAGGACGCCAAGAGCGTGGCGCCGGGCAACTTCGAGCGCCA 1073
consensus_9747#1      ATACTATATTTTCTTCGTCTAAAAAACCAACT-TTTAAGGATAATCATCTTTAGAAGTT- 1043
                          *  *   ** *** * *  *  ****     *   *     ** ***     *   

consensus_9747#0      CTGGGGCATCCTCCGGTACGACGGCCAGCCCAAGTACTCCATGGACCTCGCAGGGCAGGG 1133
consensus_9747#1      ---GATTTTTATTTGGGATCGAGGATGTATTAGGTGTTTAGATATTGACAAAAGATCTGA 1100
                         *    *  *  ** *    **       * **  *          *  * *    * 

consensus_9747#0      TCGGGACACGGCGCTCGTGGCGGCGCGCGGCGTCGCCTACCTCCCGCGCGCGTGGTGCGT 1193
consensus_9747#1      ATATGATGTGTCATCAGTACTAGCGATC--CTACAAGGATCATCCCTCTGAAT------- 1151
                          **   * *    **    ***  *  *  *    * *  **    *  *       

consensus_9747#0      GCTCAACCCGAGCGCCACGCCGGACGCCATGAGCAGGGTCGGCGACAACGTCAACTACGC 1253
consensus_9747#1      ------------------------------------------------------------
                                                                                  

consensus_9747#0      CTGCACGTACGCCGACTGCACCTCGCTGGGCTACGGCTCGACGTGCAACGGCATGGACGC 1313
consensus_9747#1      ------------------------------------------------------------
                                                                                  

consensus_9747#0      CGCCGGCAACGCCTCCTACGCCTTCAACGCCTACTTCCAGGTGCAGAACCAGGTGGAGGA 1373
consensus_9747#1      ------------------------------------------------------------
                                                                                  

consensus_9747#0      GTCGTGCGGTTTCCAGGGCCTCGCCGTGCAGACGCAGCAGGACCCGTCCACGAACGCCTG 1433
consensus_9747#1      ------------------------------------------------------------
                                                                                  

consensus_9747#0      CAACTTCACCATACAGATCGAGCCGTCTGCGGCCGCCGGCCGACGGCCGGCGGCGGTGGC 1493
consensus_9747#1      ------------------------------------------------------------
                                                                                  

consensus_9747#0      CGTGACGGTGGCGACGGCCATGCTGATCTCGGTTCTCGCCGCCATGGTCACGACGCCCTG 1553
consensus_9747#1      ------------------------------------------------------------
                                                                                  

consensus_9747#0      ATTGGCGTGAGGACATAGTTACATTTGTAGAGGTTTTCTGCTTGATTTTGTAGATACTTT 1613
consensus_9747#1      ------------------------------------------------------------
                                                                                  

consensus_9747#0      GGTGTTGCCTATACAGCGATTGATCGATACACGCTCGTTTGGTCGTTTCGATGTCTAACT 1673
consensus_9747#1      ------------------------------------------------------------
                                                                                  

consensus_9747#0      GGGTGGCTGAAATTTCGGCCCATGAAGTAGATGGGCTTGTAAGTTGGAAACAAATTACGG 1733
consensus_9747#1      ------------------------------------------------------------
                                                                                  

consensus_9747#0      CCCATTTATATATGGATATGGGCCGGTTTCTGTGACGGCCCGCGTAGCTTCGGAGGAAG 1792
consensus_9747#1      -----------------------------------------------------------
                                                                                 




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)