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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9773#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2815 fasta sequence
[AGCTGACCTACTTTCGGAAATCCTTCTTCGGCCTGGTGGGTACCATATCAGCGATGCTAGTGAAGGTGGAGAAAGGCTCCTTCTGCAGGATGGAAGGGGTACGGCTAATGCTGGCGCGCGTTTTGCTGGTTCTCCAGCTGGTGGTGCTGGTGGTGATCCTCTCCCCTCTCGCGGTGTTCTACCTGTTCGGCCTCCTCATCACCGCCGGCCTCTCGCTGTGGCGCTTGCTGCAGCGCGACTACGGCGCCGGCGAGGAGGCGGCCAACCTCGCGCCGGCGCTCAACGTGCTCTACTCGCTG-GCGCTCGTCCAGGGCGCCCTCTTCTTCTACTACTTCACCTCGCGCCTCCTCGGGAGGCGGCTGGCGAACTTGGTCGCCGGAGTTTACAGCTTCGGCGGCGAGGGGGAGGAGGAGGATGACGGCGGGCGCACGTCGGTGGTGGAGTACATGCGGCAGACGAGGAACGGATGCGAGAAGGACCCGTCGTCGGTGAGAGGGAGGAACCTCGTCACGTTCGCCGTGACGATGATGAAGGAGTCGTCGCCGTCGTCGNTGTCGCCCGGCGACTACTCCTCCGCGGCTACGATCCTCGACAAGCTCCTGTCACAGGCCTGGCTGCGGGAGCAGCACGAGCTCATCAGGCAGCTCGTCGGGTCGTCCACCGACCTGATGGACAAGCTGCTGCAGACGCTCCGGTGCACGGGGACCCGCGACCGCGGCGTTCGGGAGCACGCCGCGAGGATCGTGGCGCACCTCGCCGGCGAGATCACGCTCGCCAGGTTCCCGCAAGGGATCCGGTGCATATACTCGCTGCTCACCACCCCGAGAAACCAGCAGCAAGACGACGACAACGACGACGACGACGACGACAGCGCCCAGTCCTCCGATCACTACAAGAAGCTCATGGTGCAGGGCCTCGTCATCCTCCACAAGCTAGCCGCCGCGGAGCACAACCGGCGGATCATCATCAACAGCACCCAGGGACGGCAGCTGCTCTCCATGGCCATGGCGCCCGTCAGCGCCGACCTGCTCCACCGCATCGACCACGAAGCGTGGAACGACATCGTCGCCTGCTCGCTGCAGCTCATGTGCCGGCTCGTCACCGCCCCCGGCGAGACCGGCGACAAGCTGCGTTCCCAGGTGCTGAACGACAAGGACGCCATCGGCACCATGGAGAGGATCCTCAACTGCGACGGATGCAACGAGAAGAGGCTCTATATTCTCGCCATTAACATCCTCACGCAGCTTCCCATGGCGGCGAAGAACAAGGTGGTGGACGAGGCTTCGAGCATGAGCGTCGAGAGCAGAAGGAAATTCACCAAGCTACTTCTACTCATCTATACCGACGAAGAGAAGGACGCCTTTATGAGACAAATGGCAGGTGAAGCATTGGCAATGCTGTCCGAACGAAGCAAGAGCGACGCCACAATCATCTTGAAAGCAAGTGACAGCACTCTCAAGGACCTCACCGCAATGCTCTTGGATGTAAATAGCAACAGAGGATACAGAATATGTGCAGCTGAAATCCTGGAGCATCTGTACATTCGATACACCAAGCAAGATGGCTATCTCAACAATCTGACGGAAGCCATGAAAGATGTGTTGCCAAAGGTGCTCGGAGAAATTTTTCTTGTGTCATGGACGCATAAAGAAAAGCAACCAGGAATGACAGAACAAGGAACAGAGGGAGTTAATTTCTCGGCACAAAAAGCTGACATTGAAAGTCAAGATCCCGTTGCTTGTCAACATGAAAAGGTTAAAGAGGAAAACGAAAAGGTTAAAGAGGAAAATGAAAAAGTTAAAGAGCAAGATGAAAAGGTTAAAGAGCAAACTGTGGATATGAAACTTTATGCAGCTTTACTGTCACTTAGTGAGGCAATATTTCAAAGATTGGTCAATGATGATAAAGATTTGGCTGAACTGACTGATAAAATTGCCCCAGGAGGAGGCACTGCATTTAGCTTCGCCGGAAAGCTCAAGGAGATGGTAGAAGGAAACAGTGAACAAGCAACAGCCAATTGCCTGAGAATGCTGAAGATTACTACCAGGATGATCATATCATTGATAAATCTCAATGGAGCCAAAGTCGGAGCAGACCTGGAGAGCTTGATGCA-TTCTCTGTTAAAAGCTTCAGAAAAGAT-GTTGGAACTGGAGGGCTTCATGATTTTCTCTAGCA-GCGATCGTACCGAAAGCACGAATCCTGCCAACATTCTCGCTTCCCTCGTGAAAGAAGCACAGGAGCTTCTGGAGAAGAAGAGGCAGGCACAAACTACACCCGCTCCATCAATGGAGACCAGCTGATTGAGTAAACAGACTATCAACACGATCGTATGCTGATCTGCAGACTGTTGGCAGTAATACCTGGAAACTGACACCGTACAATCCCTGAAAACTGTCTCTGTAATCTGTATGTGTGCTGAAACTTATCTATCTTGTCAATTGTCCCATCTATTTCAAAAACTTTCAAGTTGAACTTTACAACAAACTGTTGAGCTTTATTGGCAGTTCGTATAATATCCTCTTGGAACAGTAGATAAAACCTATCTGAAGAGGTGAAGAGGCCAAGGATCTGCATCAACCTACTGCACATTCAGTACTTGCTCACCTATGTTAGGGGTGAAACAACTATTACATAATTCGGGTATTTTGTATGCATTTTAAAACAAGTTGGATAATCAGAGACACCAATTCTGATGTACTCGTCTAATAAATTTATCCAGGACTTCGGACGGAACTCAGCCCATCTGAAGTATTCAGTTAGTTTGTTAGGCTTTGTTAGATAGGGTTGTTAGTCAATTAGAATCAATCAATCAAGA]
[+] EMBL AK101180 [AGCTGACCTACTTTCGGAAATCCTTCTTCGGCCTGGTGGGTACCATATCAGCGATGCTAGTGAAGGTGGAGAAAGGCTCCTTCTGCAGGATGGAAGGGGTACGGCTAATGCTGGCGCGCGTTTTGCTGGTTCTCCAGCTGGTGGTGCTGGTGGTGATCCTCTCCCCTCTCGCGGTGTTCTACCTGTTCGGCCTCCTCATCACCGCCGGCCTCTCGCTGTGGCGCTTGCTGCAGCGCGACTACGGCGCCGGCGAGGAGGCGGCCAACCTCGCGCCGGCGCTCAACGTGCTCTACTCGCTG GCGCTCGTCCAGGGCGCCCTCTTCTTCTACTACTTCACCTCGCGCCTCCTCGGGAGGCGGCTGGCGAACTTGGTCGCCGGAGTTTACAGCTTCGGCGGCGAGGGGGAGGAGGAGGATGACGGCGGGCGCACGTCGGTGGTGGAGTACATGCGGCAGACGAGGAACGGATGCGAGAAGGACCCGTCGTCGGTGAGAGGGAGGAACCTCGTCACGTTCGCCGTGACGATGATGAAGGAGTCGTCGCCGTCGTCGNTGTCGCCCGGCGACTACTCCTCCGCGGCTACGATCCTCGACCAGCTCCTGTCACAGGCCTGGCTGCGGGAGCAGCACGAGCTCATCAGGCAGCTCGTCGGGTCGTCCACCGACCTGATGGACAAGCTGCTGCAGACGCTCTGGTGCATGGGGACCCGCGACGGTGGTGTTCGGGAGCATGCCTCCAGGATCGTGGCGCACCTCGCGGGNGAGATCAGGCTCGCCAGGTTCCCGCAAGGGATCGGGTGCATATACTCGCTGCTCACCACCCCGAGAAACCAGCAGCAAGACGACGACAACGACGACGACGACGACGACAGCGCCCAGTCCTCCGATCACTACAAGAAGCTCATGGTGCAGGGCCTCGTCATCCTCCACAAGCTAGCCGCCGCGGAGCACAACCGGCGGATCATCATCAACAGCACCCAGGGACGGCAGCTGCTCTCCATGGCCATGGCGCCCGTCAGCGCCGACCTGCTCCACCGCATCGACCACGAAGCGTGGAACGACATCGTCGCCTGCTCGCTGCAGCTCATGTGCCGGCTCGTCACCGCCCCCGGCGAGACCGGCGACAAGCTGCGTTCCCAGGTGCTGAACGACAAGGACGCCATCGGCACCATGGAGAGGATCCTCAACTGCGACGGATGCAACGAGAAGAGGCTCTATATTCTCGCCATTAACATCCTCACGCAGCTTCCCATGGCGGCGAAGAACAAGGTGGTGGACGAGGCTTCGAGCATGAGCGTCGAGAGCAGAAGGAAATTCACCAAGCTACTTCTACTCATCTATACCGACGAAGAGAAGGACGCCTTTATGAGACAAATGGCAGGTGAAGCATTGGCAATGCTGTCCGAACGAAGCAAGAGCGACGCCACAATCATCTTGAAAGCAAGTGACAGCACTCTCAAGGACCTCACCGCAATGCTCTTGGATGTAAATAGCAACAGAGGATACAGAATATGTGCAGCTGAAATCCTGGAGCATCTGTACATTCGATACACCAAGCAAGATGGCTATCTCAACAATCTGACGGAAGCCATGAAAGATGTGTTGCCAAAGGTGCTCGGAGAAATTTTTCTTGTGTCATGGACGCATAAAGAAAAGCAACCAGGAATGACAGAACAAGGAACAGAGGGAGTTAATTTCTCGGCACAAAAAGCTGACATTGAAAGTCAAGATCCCGTTGCTTGTCAACATGAAAAGGTTAAAGAGGAAAACGAAAAGGTTAAAGAGGAAAATGAAAAAGTTAAAGAGCAAGATGAAAAGGTTAAAGAGCAAACTGTGGATATGAAACTTTATGCAGCTTTACTGTCACTTAGTGAGGCAATATTTCAAAGATTGGTCAATGATGATAAAGATTTGGCTGAACTGACTGATAAAATTGCCCCAGGAGGAGGCACTGCATTTAGCTTCGCCGGAAAGCTCAAGGAGATGGTAGAAGGAAACAGTGAACAAGCAACAGCCAATTGCCTGAGAATGCTGAAGATTACTACCAGGATGATCATATCATTGATAAATCTCAATGGAGCCAAAGTCGGAGCAGACCTGGAGAGCTTGATGCA TTCTCTGTTAAAAGCTTCAGAAAAGAT GTTGGAACTGGAGGGCTTCATGATTTTCTCTAGCA GCGATCGTACCGAAAGCACGAATCCTGCCAACATTCTCGCTTCCCTCGTGAAAGAAGCACAGGAGCTTCTGGAGAAGAAGAGGCAGGCACAAACTACACCCGCTCCATCAATGGAGACCAGCTGATTGAGTAAACAGACTATCAACACGATCGTATGCTGATCTGCAGACTGTTGGCAGTAATACCTGGAAACTGACACCGTACAATCCCTGAAAACTGTCTCTGTAATCTGTATGTGTGCTGAAACTTATCTATCTTGTCAATTGTCCCATCTATTTCAAAAACTTTCAAGTTGAACTTTACAACAAACTGTTGAGCTTTATTGGCAGTTCGTATAATATCCTCTTGGAACAGTAGATAAAACCTATCTGAAGAGGTGAAGAGGCCAAGGATCTGCATCAACCTACTGCACATTCAGTACTTGCTCACCTATGTTAGGGGTGAAACAACTATTACATAATTCGGGTATTTTGTATGCATTTTAAAACAAGTTGGATAATCAGAGACACCAATTCTGATGTACTCGTCTAATAAATTTATCCAGGACTTCGGACGGAACTCAGCCCATCTGAAGTATTCAGTTAGTTTGTTAGGCTTTGTTAGATAGGGTTGTTAGTCAATTAGAATCAATCAATCAAGA]
[+] EMBL AK060733 [ CTGCAGGATGGAAGGGGTACGGCTAATGCTGGCGCGCGTTTTGCTGGTTCTCCAGCTGGTGGTGCTGGTGGTGATCCTCTCCCCTCTCGCGGTGTTCTACCTGTTCGGCCTCCTCATCACCGCCGGCCTCTCGCTGTGGCGCTTGCTGCAGCGCGGCTACGGCGCCGGCGAGGAGGCGGCCAACCTCGCGCCGGCGCTCAACGTGCTCTACTCGCTG GCGCTCGTCCAGGGCGCCCTCTTCTTCTACTACTTCACCTCGCGCCTCCTCGGGAGGCGGCTGGCGAACTTGGTCGCCGGAGTTTACAGCTTCGGCGGCGAGGG GGAGGAGGATGACGGCGGGCGCACGTCGGTGGTGGAGTACATGCGGCAGACGAGGAACGGATGCGAGAAGGACCCGTCGTCGGTGAGAGGGAGGAACCTCGTCACGTTCGCCGTGACGATGATGAAGGAGTCGTCGTCGTCGTCGCTGTCGTCCGGCGACTACTCCTCCGGGGCTAGGATCCTCGACAAGCTCCTGTCACAGGCCTGGCTGCGGGAGCAGCACGAGCTCATCAGGCAGCTCGTCGGGTCGTCCACCGACCTGATGGACAAGCTGCTGCAGACGCTCCGGTGCACGGGGACCCGCGACCGCGGCGTTCGGGAGCACGCCGCGAGGATCGTGGCGCACCTCGCCGGCGAGATCACGCTCGCCAGGTTCCCGCAAGGGATCCGGTGCATATACTCGCTGCTCACCACCCCGAGAAACCAGCAGCAAGACGACGACAACGACGACGACGACGACGACAGCGCCCAGTCCTCCGATCACTACAAGAAGCTCATGGTGCAGGGCCTCGTCATCCTCCACAAGCTAGCCGCCGCGGAGCACAACCGGCGGATCATCATCAACAGCACCCAGGGACGGCAGCTGCTCTCCATGGCCATGGCGCCCGTCAGCGCCGACCTGCTCCACCGCATCGACCACGAAGCGTGGAACGACATCGTCGCCTGCTCGCTGCAGCTCATGTGCCGGCTCGTCACCGCCCCCGGCGAGACCGGCGACAAGCTGCGTTCCCAGGTGCTGAACGACAAGGACGCCATCGGCACCATGGAGAGGATCCTCAACTGCGACGGATGCAACGAGAAGAGGCTCTATATTCTCGCCATTAACATCCTCACGCAGCTTCCCATGGCGGCGAAGAACAAGGTGGTGGACGAGGCTTCGAGCATGAGCGTCGAGAGCAGAAGGAAATTCACCAAGCTACTTCTACTCATCTATACCGACGAAGAGAAGGACGCCTTTATGAGACAAATGGCAGGTGAAGCATTGGCAATGCTGTCCGAACGAAGCAAGAGCGACGCCACAATCATCTTGAAAGCAAGTGACAGCACTCTCAAGGACCTCACCGCAATGCTCTTGGATGTAAATAGCAACAGAGGATACAGAATATGTGCAGCTGAAATCCTGGAGCATCTGTACATTCGATACACCAAGCAAGATGGCTATCTCAACAATCTGACGGAAGCCATGAAAGATGTGTTGCCAAAGGTGCTCGGAGAAATTTTTCTTGTGTCATGGACGCATAAAGAAAAGCAACCAGGAATGACAGAACAAGGAACAGAGGGAGTTAATTTCTCGGCACAAAAAGCTGACATTGAAAGTCAAGATCCCGTTGCTTGTCAACATGAAAAGGTTAAAGAGGAAAACGAAAAGGTTAAAGAGGAAAATGAAAAAGTTAAAGAGCAAGATGAAAAGGTTAAAGAGCAAACTGTGGATATGAAACTTTATGCAGCTTTACTGTCACTTAGTGAGGCAATATTTCAAAGATTGGTCAATGATGATAAAGATTTGGCTGAACTGACTGATAAAATTGCCCCAGGAGGAGGCACTGCATTTAGCTTCGCCGGAAAGCTCAAGGAGATGGTAGAAGGAAACAGTGAACAAGCAACAGCCAATTGCCTGAGAATGCTGAAGATTACTACCAGGATGATCATATCATTGATAAATCTCAATGGAGCCAAAGTCGGAGCAGACCTGGAGAGCTTGATGCA TTCTCTGTTAAAAGCTTCAGAAAAGAT GTTGGAACTGGAGGGCTTCATGATTTTCTCTAGCA GCGATCGTACCGAAAGCGCGAATCCTGCCAACATTCTCGCTTCCCTCGTGAAAGAAGCACAGGAGCTTCTGGAGAAGAAGAGGCAGGCACAAACTACACCCGCTCCATCAATGGAGACCAGCTGATTGAGTAAACAGACTATCAACACGATCGTATGCTGATCTGCAGACTGTTGGCAGTAATACCTGGAAACTGACACCGTACAATCCCTGAAAACTGTCTCTGTAATCTGTATGTGTGCTGAAACTTATCTATCTTGTCAATTGTCCCATCTATTTCAAAAACTTTCAA ]
[+] EMBL CB640691 [ TGCCGGTTCTCCAGCTGGTGGTGCTGGTGGTGATCCTCTCCCCTCTCGCGGTGTTCTACCTGTTCGGCCTCCTCATCACCGCCGGCCTCTCGCTGTGGCGCTTGCTGCAGCGCGACTACGGCGCCGGCGAGGAGGCGGCCAACCTCGCGCCGGCGCTCAACGTGCTCTACTCTTTGTTTTCTCGTACAGGGCGCCCTCTTC ]
[+] EMBL CB638263 [ ACAAGCTCCTGT ACTAGCCTGGCTGCGGGAGCAGCACGAGCTCATCAGGCAGCTCGTCGGGTCGTCCACCGACCTGATGGACAAGCTGCTGCAGACGCTCCGGTGCACGGGGACCCGCGACCGCGGCGTTCGGGAGCACGCCGCGAGGATCGTGGCGCACCTCGCCGGCGAGATCACGCTCGCCAGGTTCCCGCAAGGGATCCGGTGCATATACTCGCTGCTCACCACCCCGAGAAACCAGCAGCAAGACGACGACAACGACGACGACGACGACGACAGCGCCCAGTCCTCCGATCACTACAAGAAGCTCATGGTGCAGGGCCTCGTCATCCTCCACAAGCTAGCCGCCGCGGAGCACAACCGGCGGATCATCATCAACAGCACCCATGGACGGCAGCTGCTCTCCATGGCCATGGCGCCCGTCAGCGCCGACCTGCTCCACCGCATCGACCACGAAGCGTGGAACGACATCGTCGCCTGCTCGCTGCAGC ]
[-] EMBL CB638264 [ CTGTGGATATGAAACTTTATGCAGCTTTACTGTCACTTAGTGAGGCAATATTTCAAAGATTGGTCAATGATGATAAAGATTTGGCTGAACTGACTGATAAAATTGCCCCAGGAGGAGGCACTGCATTTAGCTTCGCCGGAAAGCTCAAGGAGATGGTAGAAGGAAACAGTGAACAAGCAACAGCCAATTGCTTGAGAATGCTGAAGATTACTACCAGGATGATCATATCATTGATAAATCTCAATGGAGCCAAAGTCGGAGCAGACCTGGAGAGCTTGATGCA TTCTCTGTTAAAAGCTTCAGAAAAGAT GTTGGAACTGGAGGGCTTCATGATTTTCTCTAGCA GCGATCGTACCGAAAGCACGAATCCTGCCAACATTCTCGCTTCCCTCGTGAAAGAAGCACAGGAGCTTCTGGAGAAGAAGAGGCAGGCACAAACTACACCCGCTCCATCAATGGAGACCAGCTGATTGAGTAAACAGACTATCAACACGATCGTATGCTGATCTGCAGACTGTTGGCAGTAATACCTGGAAACTGACACCGTACAATCCCTGAAAACTGTCTCTGTAATCTGTATGTGTGCTGAAACTTATCTATCTTGTCAATTGTCCCAT TATTTCAAAAA TTTCAAGTTGA ]
[+] EMBL BI812951 [ ggAAGCTCAAGGAGATGGTAGAA GAACCCGTGAACAA C ACAGCC ATTGCCTGAGAATGCTGAAGATTACTACCAGGATGATCATATCATTGATAAATCTC ATGGAGCCCAAGTCGGAGCAGACCTGGAGAGCTTGATGCACTTCTCTGTTAAAAGCTTCAGAAAAGATCGTTGGAACTGGAGGGCTTCATGATTTTCTCTAGCACGCGATCGTACCGAAAGCACGAATCCTGCCAACATTCTCGCTTCCCTCGTGAAAGAAGCACAGGAGCTTCTGGAGAAGAAGAGGCAGGCAC AACTACACCCGCTCCATCAATGGAGACCAGCTGATTGAGTAGACAGACTATC ACACGATCGTATGCTGATCTGCAGACTGTT GCAGTAATCCCTGGAAACTGTCACCGTACAATCCCTGAAAACTGTCTCTGTAATCTGTATGTGTGCTGAAACTTATCTATCTTGTC ATTGTCCCATCTATTTC AAAACTTTGAAGTTGAACTTTACCAC AACTGTTGAGCTTTAaaaaaa ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||