These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9793#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 3935 fasta sequence [CCATATAATTTGCTTGCGCCAAAACCAAACATAGAGCAGCAATAGAGAGGAGGAGAGGGAGATGATGGCCCATCTCCTTCTCCTCCATCCACCTGCCAGCTCGAAGATTTCTGTCTGAATCGATCGGATCAAGATCAAATCAAGGAGGGAGGAGGTTGAGCAATTCCTGACAGGGACAGATCGGGAAAGCTCTCACAGCTTTTTCTTTGTTTTTGTTTGATTTGTTCCTGCTTTTCGATTGGAAAATTGGGAGGGGAGGAAGGTGATAGCCATTGAGGTGGTGGCATTTGCTGTCACCACCTTTAGCTATCGCCTTCCTCTTCCTCGTCTCGCTCGCCCCCCGGTCTAGCTTCTTTCTGCAGGGCCGGACGGAAAAAACAAAACAAAAGAAGGCACCAGCCAGCCATGGCGATGGTGCTGGACTCCTTCGTCACCCGGTGCACGGCGTCGCTGGAGGACTTCGCCGGGCAGGAGGCGTGCGGCGCCCTCGGCATCGGGGACGACGTGCGGTGCCTCCTGGCCACGCTCCGGCGCGTCCAGGCCGTCGTCTCCCACGAGGAGCGCCGCGGCAGGGTGCTGAGCGCCAAGGTGGACGCCTGGGTGGCGCAGGTGAAGGACGCGATGTACGAGACCGACGACGTCCTCGACGTCCCCATGGTCGAGGGCGGCAAGATGCTCGCCGAGGGGGACAGCCCGCCGACGCCCAAGGCGCGCTGCTCCCTCATGTTCTCCTGCTTCAAGCCTGCATCCGCCCCAAAGTTCCACCACGAGATCGGCTTCACCTTCAGGGAGATCGACGCCAAGCTGAGGGAGATCGAGGAGGAAATGCCCAGGCTCCCCGCAGGATCTTTGCACTCTGAATCAAGAAGGGATTGGTTCAGTAGAGGCATCTGCAGTAACTTCTCTGACGCCATTAGGCCACTCGCGGTTGGGACACAGGTTCAGAAATCTCTGGATGGCCTTGTGCCTAGGATGATTAGAGAGGGCAAGAAGAAGGTGGATGTCTTGGCCATCGTCGGCGCAGTGGGGATCGGCAAGACAATGCTTGCTAGGGAGATTTACAACGACGAGAGGATGACCGAAACATTTCCAATTCGTGTGTGGGTGAAGATGACAAAGGATTTGACAGATGTGGATTTCTTGAAGAAGATCATCATCGGTGCCGGTGGTGGTGTCAATGTTGGTGAGATTGAGAGCAAGAAGGAGCTCCTTGGAATCGTCAGTTCTACTCTTTCGAAGAGGTTTCTCATTGTATTGGATGACTTGGACAACCCAGGTATATGGGATGATCTGCTCAAAGATCCACTGGGAGATGGTGTGGCCCGAGGCAGAATACTAATCACAACACGGAGCGAGGAAGTGGCAACAGGCATGAAGGCCATGGTCCACCGCGTCGACAAAATGGATGCAGAGAATGGCTGGGCATTGTTGTGCAGGCAGTCTCTCCCAGAGTGCAGTTCAGAAGAGCTCGCGTCACTGAAGGATGTTGGGATCAAGATTGTGGAGAGATGTGATGGCCATCCTCTAGCAATCAAGATGGTTGCTGGTGTCCTAAGGTCTAGAGGCAAGAGCAAGGCTGAGTGGGAGATGGTTATGAGAAGTGATGTTTGGTCCATGCGGCCAATCATTCCTGAGCTGCCTCAAGCTCTCTACTTGAGTTATGTTGATCTGCCTTCTGAATTAAAGGAGTGCTTCCTCCATTGCTCTTTGTATCCAGAAGAATTACCCATTCAGAGGTTTGGTCTTATCCGACGTTGGATAGCTGAAGGCCTTGTAAGTGACAAAGACAATAAGTTGCTAGAACATTCTGCTGAAGAGTACTATGCAGAATTGGTAAGCAGAAACCTGTTACAGCTTTATGCTGGTAATCTTGATCAGTGCTGGATAACGCATGATCTTCTTCGCTCACTAGCACGCTTTCTGATAACAGATGAGAGTATCTTAATCAGCGGCCAACAGAGATTGAGCACAGACCCATTGTCATTGTCAAAGCCACGACACCTGACATTGTGCAACATGGAAAACAGATTTGATGATCCAATTTCAGTAAAGCAGCAGATGAGCCTAAGGTCATTGATGCTCTTCAATAGCCCAAATGTCAGATCAATAGATAATCTCGTCGAGTCAGCATCATGCTTGCGTGTCTTGGATCTGAGCAAGACAGCATTAGGTGCTCTCCCAAAATCCATTGGTAACCTGCTTCATTTGAGGTACCTCAATCTTGATGAAACTCAGGTCAGAGACATACCCTCTTCCATTGGCTTTCTTATAAACTTGGAGACTTTGAGCCTTCAGAATTGCCGGAGATTGCAGAGACTTCCTTGGACCGTCAGGGCATTGCTACAGCTTAGATGCCTTTTGCTCACAGGAACTTCTCTTAGTCATGTACCAAAGGGTGTTGGTGATTTGAAGAATCTGAACTATCTTGCTGGTTTAATCATTAGTCACGACAACGGTGGACCTGAGGGTTGTGATTTAAATGACCTACAGACTTTGTCAGAATTAAGGCACCTTCACATAGAGAACCTGGATAGAGCTACTTCAGGCGCTTCTGCACTTGCAAACAAGCCATTCCTCAAGGATCTACACCTCTGTGAACAGGCACCATTGATAGAGGAGCAGCAATCTGAACAAGAACAAGAGAATCAAGATGACCAAAAGGAAACAGAGGAAGAAGAGAAGGAAGTACTTGATGTAACCAATAGCCAATTTAGTAGAGAGGAATCAATCAAAGCGAGCGAAAAGATATGGAACGAACTCACCCCACCCCAGAACATTGAGAAACTAGTAATTAAGAACTACCGAGGTGGAAAGTTTCCAAACTGGTTGACAGGTCCAAAGCTGGGCATATCATTCCCTAGTCTTGTGTACTTGGATATCGACAACTGCATGTCATGCACGGCACTGCCTGCTCTTGGCCTCCTAAACCAACTCCAGTCCTTGCAAATCTCGAATGCAGACTCAGTCGTCACCATTGGTCCTGAATTCCTCGGTGCTGCTTCATCATCATCGGCCACTGCTTCCTTCCCCAAGCTTGAGATATTAAAGCTCAGAAACATGAAGAAATTGGAAGAGTGGTCATTAGCCGTGGAAGAGAATCAGATATTGTTACCATGTCTTAAATCACTGCACATACAGTTCTGCCCCAAACTTAAAGCTCTACCAGAAGGACTGAAGAATGTTTCGCTGCGTGAGCTTCATGTCGAGGGTGCATATAGCCTAACAGAAATAAAGGACCTGCCGAGAATATCTGATGATCTCCAACTCAAAGACAACAGAGCACTTCAGAGGATCTCTAGCTTGCCCGTATTGCAGTCTCTCACCATTGACAACTGCCCAAAGTTGAAGCATGTTTCAGGCCTTGACACACTGCAGCATCTCAGGCTGGCGTTCCCTCCATCCACA-GAGACAT-TTTATTTTGATGAGCTGATCATCTTCTGGAGTATTGCATTCCCACGGTGGCTGGAGCTGTTGATCCGTAA-GCGCGATGGGCTGCGCCATTTCGAGCTTCAGTGCAGCCTCTCA-TTGCTCAGGAGCTGCCTGGACGGTGG-CAAGAACTGGAGCATCGTTCAGCAGATCCCCGAGGTGCGGATCACCAGCA-CCGATGG-CAAGAGGTACATCCGGTACAACAAACG-CCGGTGCATCTATGAGACGAATGCTCAGTCAGAAGATTGAAGCCTTCGTGAAAGTCCCAGTGCAGTACG-TTTTTTTTTTTTCATCTTCA-TTGTGCAGTTCATCTTGTCAAGGTTCTCTTGTTCAGTTGTGTGGTGTCATTACTTACAGAAGTGTATATTTTCGTTGATTTATTGGCAGTGGTTTGGGTTGTTA-CAAG-GACACATCT-CAGTTTTCCTGGGTAGTCCTTCCATGAGTTTTGTTTGCAATATTTGCCAACACGTGCATTCACACAGGCTATTATGTAAGCCTTTGTTCTATCT] [+] EMBL AK066598 [CCATATAATTTGCTTGCGCCAAAACCAAACATAGAGCAGCAATAGAGAGGAGGAGAGGGAGATGATGGCCCATCTCCTTCTCCTCCATCCACCTGCCAGCTCGAAGATTTCTGTCTGAATCGATCGGATCAAGATCAAATCAAGGAGGGAGGAGGTTGAGCAATTCCTGACAGGGACAGATCGGGAAAGCTCTCACAGCTTTTTCTTTGTTTTTGTTTGATTTGTTCCTGCTTTTCGATTGGAAAATTGGGAGGGGAGGAAGGTGATAGCCATTGAGGTGGTGGCATTTGCTGTCACCACCTTTAGCTATCGCCTTCCTCTTCCTCGTCTCGCTCGCCCCCCGGTCTAGCTTCTTTCTGCAGGGCCGGACGGAAAAAACAAAACAAAAGAAGGCACCAGCCAGCCATGGCGATGGTGCTGGACTCCTTCGTCACCCGGTGCACGGCGTCGCTGGAGGACTTCGCCGGGCAGGAGGCGTGCGGCGCCCTCGGCATCGGGGACGACGTGCGGTGCCTCCTGGCCACGCTCCGGCGCGTCCAGGCCGTCGTCTCCCACGAGGAGCGCCGCGGCAGGGTGCTGAGCGCCAAGGTGGACGCCTGGGTGGCGCAGGTGAAGGACGCGATGTACGAGACCGACGACGTCCTCGACGTCCCCATGGTCGAGGGCGGCAAGATGCTCGCCGAGGGGGACAGCCCGCCGACGCCCAAGGCGCGCTGCTCCCTCATGTTCTCCTGCTTCAAGCCTGCATCCGCCCCAAAGTTCCACCACGAGATCGGCTTCACCTTCAGGGAGATCGACGCCAAGCTGAGGGAGATCGAGGAGGAAATGCCCAGGCTCCCCGCAGGATCTTTGCACTCTGAATCAAGAAGGGATTGGTTCAGTAGAGGCATCTGCAGTAACTTCTCTGACGCCATTAGGCCACTCGCGGTTGGGACACAGGTTCAGAAATCTCTGGATGGCCTTGTGCCTAGGATGATTAGAGAGGGCAAGAAGAAGGTGGATGTCTTGGCCATCGTCGGCGCAGTGGGGATCGGCAAGACAATGCTTGCTAGGGAGATTTACAACGACGAGAGGATGACCGAAACATTTCCAATTCGTGTGTGGGTGAAGATGACAAAGGATTTGACAGATGTGGATTTCTTGAAGAAGATCATCATCGGTGCCGGTGGTGGTGTCAATGTTGGTGAGATTGAGAGCAAGAAGGAGCTCCTTGGAATCGTCAGTTCTACTCTTTCGAAGAGGTTTCTCATTGTATTGGATGACTTGGACAACCCAGGTATATGGGATGATCTGCTCAAAGATCCACTGGGAGATGGTGTGGCCCGAGGCAGAATACTAATCACAACACGGAGCGAGGAAGTGGCAACAGGCATGAAGGCCATGGTCCACCGCGTCGACAAAATGGATGCAGAGAATGGCTGGGCATTGTTGTGCAGGCAGTCTCTCCCAGAGTGCAGTTCAGAAGAGCTCGCGTCACTGAAGGATGTTGGGATCAAGATTGTGGAGAGATGTGATGGCCATCCTCTAGCAATCAAGATGGTTGCTGGTGTCCTAAGGTCTAGAGGCAAGAGCAAGGCTGAGTGGGAGATGGTTATGAGAAGTGATGTTTGGTCCATGCGGCCAATCATTCCTGAGCTGCCTCAAGCTCTCTACTTGAGTTATGTTGATCTGCCTTCTGAATTAAAGGAGTGCTTCCTCCATTGCTCTTTGTATCCAGAAGAATTACCCATTCAGAGGTTTGGTCTTATCCGACGTTGGATAGCTGAAGGCCTTGTAAGTGACAAAGACAATAAGTTGCTAGAAGATTCTGCTGAAGAGTACTATGCAGAATTGGTAAGCAGAAACCTGTTACAGCTTTATGCTGGTAATCTTGATCAGTGCTGGATAACGCATGATCTTCTTCGCTCACTAGCACGCTTTCTGATAACAGATGAGAGTATCTTAATCAGCGGCCAACAGAGATTGAGCACAGACCCATTGTCATTGTCAAAGCCACGACACCTGACATTGTGCAACATGGAAAACAGATTTGATGATCCAATTTCAGTAAAGCAGCAGATGAGCCTAAGGTCATTGATGCTCTTCAATAGCCCAAATGTCAGATCAATAGATAATCTCGTCGAGTCAGCATCATGCTTGCGTGTCTTGGATCTGAGCAAGACAGCATTAGGTGCTCTCCCAAAATCCATTGGTAACCTGCTTCATTTGAGGTACCTCAATCTTGATGAAACTCAGGTCAGAGACATACCCTCTTCCATTGGCTTTCTTATAAACTTGGAGACTTTGAGCCTTCAGAATTGCCAGAGATTGCAGAGACTTCCTTGGACCGTCAGGGCATTGCTACAGCTTAGATGCCTTTCGCTCACAGGAACTTCTCTTAGTCATGTACCAAAGGGTGTTGGTGATTTGAAGAATCTGAACTATCTTGCTGGTTTAATCATTAGTCACGACAACGGTGGACCTGAGGGTTGTGATTTAAATGACCTACAGACTTTGTCAGAATTAAGGCACCTTCACATAGAGAACCTGGATAGAGCTACTTCAGGCGCTTCTGCACTTGCAAACAAGCCATTCCTCAAGGATCTACACCTCTGTGAACAGGCACCATTGATAGAGGAGCAGCAATCTGAACAAGAACAAGAGAATCAAGATGACCAAAAGGAAACAGAGGAAGAAGAGAAGGAAGTACTTGATGTAACCAATAGCCAATTTAGTAGAGAGGAATCAATCAAAGCGAGCGAAAAGATATGGAACGAACTCACCCCACCCCAGAACATTGAGAAACTAGTAATTAAGAACTACCGAGGTGGAAAGTTTCCAAACTGGTTGACAGGTCCAAAGCTGGGCATATCATTCCCTAGTCTTGTGTACTTGGATATCGACAACTGCATGTCATGCACGGCACTGCCTGCTCTTGGCCTCCTAAACCAACTCCAGTCCTTGCAAATCTCGAATGCAGACTCAGTCGTCACCATTGGTCCTGAATTCCTCGGTGCTGCTTCATCATCATCGGCCACTGCTTCCTTCCCCAAGCTTGAGATATTAAAGCTCAGAAACATGAAGAAATTGGAAGAGTGGTCATTAGCCGTGGAAGAGAATCAGATATTGTTACCATGTCTTAAATCACTGCACATACAGTTCTGCCCCAAACTTAAAGCTCTACCAGAAGGACTGAAGAATGTTTCGCTGCGTGAGCTTCATGTCGAGGGTGCATATAGCCTAACAGAAATAAAGGACCTGCCGAGAATATCTGATGATCTCCAACTCAAAGACAACAGAGCACTTCAGAGGATCTCTAGCTTGCCCGTATTGCAGTCTCTCACCATTGACAACTGCCCAAAGTTGAAGCATGTTTCAGGCCTTGACACACTGCAGCATCTCAGGCTGGCGTTCCCTCCATCCACA GAGACAT TTTATTTTGATGAGCTGATCATCTTCTGGAGTATTGCATTCCCACGGTGGCTGGAGCTGTTGATCCGTAA GCGCGATGGGCTGTGCCATTTCGAGCTTCAGTGCAGCCTCTCA TTGCTCAGGAGCTGCCTGGACGGTGG CAAGAACTGGAGCATCGTTCAGCAGATCCCCGAGGTGCGGATCACCAGCA CAGATGG CAAGAGGTACATCCGGTACAACAAACG CCGGTGCATCTATGAGACGAATGCTCAATCTGAAGATTGAAGCCTTCGTGAAAGTCCCAGTGCAGTACG TTTTTTTTTTTTCATCTTCA TTGTGCAGTTCATCTTGTCAAGGTTCTCTTGTTCAGTTGTGTGGTGTCATTACTTACAGAAGTGTATATTTTCGTTGATTTATTGGCAGTGGTTTGGGTTGTTA CAAG GACACATCT CAGTTTTCCTGGGTAGTCCTTCCATGAGTTTTGTTTGCAATATTTGCCAACACGTGCATTCACACAGGCTATTATGTAA ] [+] EMBL CB627594 [ CTAGAACCTTCTGCTGAAGAGTACTATGCAGAATTGGTAAGCAGAAACCTGTTACAGCTTTATGCTGGTAATCTTGATCAGTGCTGGATAACGCATGATCTTCTTCGCTCACTAGCACGCTTTCTGATAACAGATGAGAGTATCTTAATCAGCGGCCAACAGAGATTGAGCACAGACCCATTGTCATTGTCAAAGCCACGACACCTGACATTGTGCAACATGGAAAACAGATTTGATGATCCAATTTCAGTAAAGCAGCAGATGAGCCTAAGGTCATTGATGCTCTTCAATAGCCCAAATGTCAGATCAATAGATAATCTCGTCGAGTCAGCATCATGCTTGCGTGTCTTGGATCTGAGCAAGACAGCATTAGGTGCTCTCCCAAAATCCATTGGTAACCTGCTTCATTTGAGGTACCTCAATCTTGATGAAACTCAGGTCAGAGACATACCCTCTTCCATTGGCTTTCTTATAAACTTGGAGACTTTGAGCCTTCAGAATTGCCGGAGATTGCAGAGACTTCCTTGGACCGTCAGGGCATTGCTACAGCTTAGATGCCTTTTGCTCACAGGAACTTCTCTTAGTCATGTACCAAAGGGTGTTGGTGATTTGAAGAATCTGAACTATCTTGCTGGTTTAATCATTAGTCACGACAACGGTGGACCTGAGGGTTGTGATTTAAATGACCTACAGACTTTGTCAGAATTAAGGCACCTTCACATAGAGAACCTGGATAGAGCTACTTCANGCGCTTCTGCACTTGCAAACAAGCCATTCCTCAAGGATCT ] [+] EMBL CB627402 [ CTAGAACATTCTGCTGAAGAGTACTATGCAGAATTGGTAAGCAGAAACCTGTTACAGCTTTATGCTGGTAATCTTGATCACCGCTGGATAACGCATGATCTTCTTCACTCACTAACACGCTTTCTGATAACAGATGAGAGTATCTTAATCACCGGCCAACAGAGATTGAGCACCGACCCATTGTCATTGTCAAAGCCACGACACCTGACATTGTGCAACATGGAAAACAGATTTGATGATCCAATTTCAGTAAAGCAGCAGATGAGCCTAAGGTCATTGATGCTCTTCAATAACCCAAATGTCAGATCCATAGATAATCTCGTCGAGTCAGAATCATGCTTGCGTGTCTTGGATCTGAGCAAGACAGCATTACGTGCTCTCCCAAAATCCATTGGTAACCTGCTTCATTTGAGGTACCTCAATCTTGATGAAACTCATGTCAGAGACATACCCTCTTCCATTGGCTTTCTTATAAACTTGGAGACTTTGAGCCTTCAGAATTGCCGGAGATTGCAGAGACTTCCTTGGACCGTCATGGCATTGCTACAGCTTAGATGCCTTTTGCTCACAGGAACTTCTCTTAGTCATGTACCAAAGGGTGTTGGTGATTTGAAGAATCTGAACTATCTTGCTGGTTTAATCATTAGTCACGACAACGGTGGACCTGAGGGTTGTGATTTAAATGACCTACAGACTTTGTCAGAATTAAGGCACCTTCTCATATAGAACCTGGATAGAGCTACTTCAGGCGCTT ] [-] EMBL CB627595 [ GGACCTGCCGAGAATATCTGATGATCTCCAACTCAAAGACAACAGAGCACTTCAGAGGATCTCTAGCTTGCCCGTATTGCAGTCTCTCACCATTGACAACTGCCCAAAGTTGAAGCATGTTTCAGGCCTTGACACACTGCAGCATCTCAGGCTGGCGTTCCCTCCATCCACA GAGACAT TTTATTTTGATGAGCTGATCATCTTCTGGAGTATTGCATTCCCACGGTGGCTGGAGCTGTTGATCCGTAA GCGCGATGGGCTGCGCCATTTCGAGCTTCAGTGCAGCCTCTCA TTGCTCAGGAGCTGCCTGGACGGTGG CAAGAACTGGAGCATCGTTCAGCAGATCCCCGAGGTGCGGATCACCAGCA CCGATGG CAAGAGGTACATCCGGTACAACAAACG CCGGTGCATCTATGAGACGAATGCTCAGTCAGAAGATTGAAGCCTTCGTGAAAGTCCCAGTGCAGTACGTTTTTTTTTTTTTCATCTTCA TTGTGCAGTTCATCTTGTCAAGGTTCTCTTGTTCAGTTGTGTGGTGTCATTACTTACAGAAGTGTATATTTTCGTTGATTTATTGGCAGTGGTTTGGGTTGTTA CAAG GACACATCT CAGTTTTCCTGGGTAGTCCTTCCATGAGTTTTGTTTGCAATATTTGCCAACACGTGCATTCACACAGGCTATTATGTAAGCCTTTGTTCTATCT] [-] EMBL CB627403 [ CAGTCTCTCACCATTGACAATTGCCCAAAGTTGAAGCATGTTTCAGGCCTTGACACACTGCAGCATCTCAGGCTGGGGTTCCCTCCATCCACA GAGACAT TTTATTTTGATGAGCTGATCATTTTTTGGAGTATTGCATTCCCACGGTGGCTGGAGCTGTTGATCCGTAA GCGCGATGGGCTGCGCCATTTGGAGCTTCAGTGCAGCCTCTCA TTGTTCAGGAGATGCCTGGACGGTGG CAAGAACTGGAGCATCGTTCAGCAGATCCCCGAGGTGCGGATCACCAGCT CCGATGG CAAGAGGTACATCCGGTACAACAAACG CCGGTGCATTTATGAGACGAATGCTCAGTCAGAAGATTGAAGCCTTCGTGAAAGTCCCAGTGCAGTACGTTTTTTTTTTTTTCATCTTCA TTGTGCAGTTCATCTTGTCAAGGTTCTCTTGTTCAGTTGTGTGGTGTCATTACTTACAGAAGTGTATATTTTCGTTGATTTATTGGCAGTGGTTTGGGTTGTTA CAAGTTTCAGGTCTCCAGTTTTCCTGGGTAGTCCTTCCATGAGTTTTGTTTTCAATATTTTCCA ] [+] EMBL BM038861 [ CCCCATGAGACCTGTTTATTTTGATGAGCTGATCATCTTCTGGAGTATTGCNTTCCCCCGGTGGCTGGAGCTGTTGATCCGTAATGCGCGATGGGCTGCGCCCTTTCGAGCTTCAGTGCAGCCTCTCATTTGCTCAGGAGCTGCCTGGACGGTGGCCAAGAACTGGAGCATCGTTCAGCAGATCCCCGAGGTGCGGATCACCAGCACCCGATGGCCAAGAGGTACATCCGGTACAACCAACGCCCGGTGCATCTATGAGACGAATGCTCAGTCAGAAGATTGAANCCTTCGTGAAAGTCCCCGTCCCGTACG TTTTTTTGTTTTCATCTTCACTTGTNCAGTTCATCTTGTCAAGGTTCTCTTGTTCAGTTGTGTGGTGTCCTTACTTACAGAAGTGTATATTTTCGTTGATTTATTGCCCGTGGTTTGGGTTGTTACCAAG GACcaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||