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Oryza sativa
cluster # 98 cluster # 98       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_98#0 length = 1784 sequences # 2  

consensusID : consensus_98#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1784
fasta sequence
                              [CATCAAACTCGTCCACGGAAAAGAACAATATTTTGCATGCATGATTCCTTCCTACCCTGGCTGCTAATTATGCTCTCCTCGGTTTCCAAAATCCGAACTCCGAGGATAACTATGTGCAAAGAGAGGCCTGCAAACTGCTTACGCCTACCAGTTTGTACCCGATCGAGTCAACACAGAAGCATCCAAAACATTGGATTCACCATTCACCTGAGTACCTGATGAAGGCTATCTATCTGAAGATGACAATTTGACACGAAAGCCTTCCTGTGCCTTTTTATGGTAATTACGTTTATACCCCTGCGATCCACCGGTACAGCACCATGAACGCCGTCTCCTCCTCCTCCGTCCCCGGCGGCGACATCCTCACCGCCTCCGCGTCCCACAGCCATGGCTCCTCCTGGCTGTGGCTATGGTGGCTCTGGTAGCTCTGGCTCCACCGGGAGCTCCACCGCCCGGAGAAGGACGATAGGGATGACGCGGAGGTGGCCAGCCGTTCCACGTACTCCCGCAGCCAGCCGCGCGTCGCGCCCGCCGCTTCGGCCACCGCCTCGCCGGGAGGCGGTGGAGACTGCTCGGCTGCTGGCTTGTCTTCCTTGACTGCGGCGGCGCTCCTGGTTGTCATGGGCGCGGCGCGGGAGACGACGGCCTCGACCTCCTCGTCGATGTGGTAGTCGAACGTGCCGAGCGAGTAGGTGGGGCGGGCGTTGCCGCCGGTGGCCGTCGACGCGCTGCGGTTGCTGACGCTGCCCATCTCGACGCGGAAGCTCCTGGAACGGTCCCTGCTCCTCGGCTCCGGCGGCGGCGGCTGCTCGGCGGCGAGGATGGCGGAGATCGAGGGGTGCGGGAGCGTGACGGTGGCGCGGCAGAGCGGGCAGGACGGGGTGGTGCGGAGCCACGCGTCGACGCAGGCGGCGTGGAACGCGTGGCGGCACGCCGGGAGCAGCCGCAGCTCGGCGTCCAGCGTGAACGGCGACAGGCAGACGGCGCAGTCCGGTGAGCTCTTGGGGAGCGCCGCCAGCGACGACGCCATCGTGAACAGCGGCAGCGACTCGATCAGCCGCTGCTTCTCGTCGCCCACCACCTCCTTCTTCCCCTCACAAACCCCATTACGCCGCACCGGAGAAGCGTCCGCCGCCTCGACGTTGTGCACCTCACGGCGCGTCCGTGGGAGCGGCGGCGGCGGCGGCGGCGGCGGCGACGACCTGGACAGAAGTCTGAGAAGTAGGTGGATCGAGACCGACGCTAGTAGAACGAAGGCAAGAAGAGCAGCGATGATGAGGAGAGACGGGAGGAAGGACGAGGCGGCGTCGGAGGATCCGGTGACGGGATCGGCAGACGGCGGCGACGGAGACGAGAGAGTGGACGCCATGGCGAGGCTTAGCCTTAGCTTGAGAATGGTTTAACTTAACCCGCCCGGGAATGAGACCTCTCGCGCCTTTTATCCCCGGGTTTCTTTGGAGTGCGCGGTGGTGGTGGTGCGGATGCAGAGGCCGGAAGTAAATAGTGGCGGGTTTGCACTCTCCTGATGGAGAGATCCCAGAAATGGTGGAGGTCAGCCTTGGAAACCAATCCACGTCTCGGTTTCTACTTTTCTACCTCTGCCTGCCCTTTGCAACCTGAAATTCTGCTACTACTGCTACGTGGAAAATTTCGCATAGCAGTTGAGCAGACAGCAGCTCAACTGTTTGCAATTCGATAGTTTGTTGCACAATAGTACAATGTTGTACACTGGTTAGTGAACTTAAGTACGTGCAAAGAATCAAATCCGCAGTAAAAATACTGCA]

[-] EMBL AK063488             [CATCAAACTCGTCCACGGAAAAGAACAATATTTTGCATGCATGATTCCTTCCTACCCTGGCTGCTAATTATGCTCTCCTCGGTTTCCAAAATCCGAACTCCGAGGATAACTATGTGCAAAGAGAGGCCTGCAAACTGCTTACGCCTACCAGTTTGTACCCGATCGAGTCAACACAGAAGCATCCAAAACATTGGATTCACCATTCACCTGAGTACCTGATGAAGGCTATCTATCTGAAGATGACAATTTGACACGAAAGCCTTCCTGTGCCTTTTTATGGTAATTACGTTTATACCCCTGCGATCCACCGGTACAGCACCATGAACGCCGTCTCCTCCTCCTCCGTCCCCGGCGGCGACATCCTCACCGCCTCCGCGTCCCACAGCCATGGCTCCTCCTGGCTGTGGCTATGGTGGCTCTGGTAGCTCTGGCTCCACCGGGAGCTCCACCGCCCGGAGAAGGACGATAGGGATGACGCGGAGGTGGCCAGCCGTTCCACGTACTCCCGCAGCCAGCCGCGCGTCGCGCCCGCCGCTTCGGCCACCGCCTCGCCGGGAGGCGGTGGAGACTGCTCGGCTGCTGGCTTGTCTTCCTTGACTGCGGCGGCGCTCCTGGTTGTCATGGGCGCGGCGCGGGAGACGACGGCCTCGACCTCCTCGTCGATGTGGTAGTCGAACGTGCCGAGCGAGTAGGTGGGGCGGGCGTTGCCGCCGGTGGCCGTCGACGCGCTGCGGTTGCTGACGCTGCCCATCTCGACGCGGAAGCTCCTGGAACGGTCCCTGCTCCTCGGCTCCGGCGGCGGCGGCTGCTCGGCGGCGAGGATGGCGGAGATCGAGGGGTGCGGGAGCGTGACGGTGGCGCGGCAGAGCGGGCAGGACGGGGTGGTGCGGAGCCACGCGTCGACGCAGGCGGCGTGGAACGCGTGGCGGCACGCCGGGAGCAGCCGCAGCTCGGCGTCCAGCGTGAACGGCGACAGGCAGACGGCGCAGTCCGGTGAGCTCTTGGGGAGCGCCGCCAGCGACGACGCCATCGTGAACAGCGGCAGCGACTCGATCAGCCGCTGCTTCTCGTCGCCCACCACCTCCTTCTTCCCCTCACAAACCCCATTACGCCGCACCGGAGAAGCGTCCGCCGCCTCGACGTTGTGCACCTCACGGCGCGTCCGTGGGAGCGGCGGCGGCGGCGGCGGCGGCGGCGACGACCTGGACAGAAGTCTGAGAAGTAGGTGGATCGAGACCGACGCTAGTAGAACGAAGGCAAGAAGAGCAGCGATGATGAGGAGAGACGGGAGGAAGGACGAGGCGGCGTCGGAGGATCCGGTGACGGGATCGGCAGACGGCGGCGACGGAGACGAGAGAGTGGACGCCATGGCGAGGCTTAGCCTTAGCTTGAGAATGGTTTA                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AK110923             [                                                                                                                                                                                                                                                     ATTTGACACGAAAGCCTTCCTGTGCCTTTTTATGGTAATTACGTTTATACCCCTGCGATCCACCGGTACAGCACCATGAACGCCGTCTCCTCCTCCTCCGTCCCCGGCGGCGACATCCTCACCGCCTCCGCGTCCCACAGCCATGGCTCCTCCTGGCTGTGGCTATGGTGGCTCTGGTAGCTCTGGCTCCACCGGGAGCTCCACCGCCCGGAGAAGGACGATAGGGATGACGCGGAGGTGGCCAGCCGTTCCACGTACTCCCGCAGCCAGCCGCGCGTCGCGCCCGCCGCTTCGGCCACCGCCTCGCCGGGAGGCGGTGGAGACTGCTCGGCTGCTGGCTTGTCTTCCTTGACTGCGGCGGCGCTCCTGGTTGTCATGGGCGCGGCGCGGGAGACGACGGCCTCGACCTCCTCGTCGATGTGGTAGTCGAACGTGCCGAGCGAGTAGGTGGGGCGGGCGTTGCCGCCGGTGGCCGTCGACGCGCTGCGGTTGCTGACGCTGCCCATCTCGACGCGGAAGCTCCTGGAACGGTCCCTGCTCCTCGGCTCCGGCGGCGGCGGCTGCTCGGCGGCGAGGATGGCGGAGATCGAGGGGTGCGGGAGCGTGACGGTGGCGCGGCAGAGCGGGCAGGACGGGGTGGTGCGGAGCCACGCGTCGACGCAGGCGGCGTGGAACGCGTGGCGGCACGCCGGGAGCAGCCGCAGCTCGGCGTCCAGCGTGAACGGCGACAGGCAGACGGCGCAGTCCGGTGAGCTCTTGGGGAGCGCCGCCAGCGACGACGCCATCGTGAACAGCGGCAGCGACTCGATCAGCCGCTGCTTCTCGTCGCCCACCACCTCCTTCTTCCCCTCACAAACCCCATTACGCCGCACCGGAGAAGCGTCCGCCGCCTCGACGTTGTGCACCTCACGGCGCGTCCGTGGGAGCGGCGGCGGCGGCGGCGGCGGCGGCGACGACCTGGACAGAAGTCTGAGAAGTAGGTGGATCGAGACCGACGCTAGTAGAACGAAGGCAAGAAGAGCAGCGATGATGAGGAGAGACGGGAGGAAGGACGAGGCGGCGTCGGAGGATCCGGTGACGGGATCGGCAGACGGCGGCGACGGAGACGAGAGAGTGGACGCCATGGCGAGGCTTAGCCTTAGCTTGAGAATGGTTTAACTTAACCCGCCCGGGAATGAGACCTCTCGCGCCTTTTATCCCCGGGTTTCTTTGGAGTGCGCGGTGGTGGTGGTGCGGATGCAGAGGCCGGAAGTAAATAGTGGCGGGTTTGCACTCTCCTGATGGAGAGATCCCAGAAATGGTGGAGGTCAGCCTTGGAAACCAATCCACGTCTCGGTTTCTACTTTTCTACCTCTGCCTGCCCTTTGCAACCTGAAATTCTGCTACTACTGCTACGTGGAAAATTTCGCATAGCAGTTGAGCAGACAGCAGCTCAACTGTTTGCAATTCGATAGTTTGTTGCACAATAGTACAATGTTGTACACTGGTTAGTGAACTTAAGTACGTGCAAAGAATCAAATCCGCAGTAAAAATACTGCA]


>consensus_98#0 CATCAAACTCGTCCACGGAAAAGAACAATATTTTGCATGCATGATTCCTTCCTACCCTGG CTGCTAATTATGCTCTCCTCGGTTTCCAAAATCCGAACTCCGAGGATAACTATGTGCAAA GAGAGGCCTGCAAACTGCTTACGCCTACCAGTTTGTACCCGATCGAGTCAACACAGAAGC ATCCAAAACATTGGATTCACCATTCACCTGAGTACCTGATGAAGGCTATCTATCTGAAGA TGACAATTTGACACGAAAGCCTTCCTGTGCCTTTTTATGGTAATTACGTTTATACCCCTG CGATCCACCGGTACAGCACCATGAACGCCGTCTCCTCCTCCTCCGTCCCCGGCGGCGACA TCCTCACCGCCTCCGCGTCCCACAGCCATGGCTCCTCCTGGCTGTGGCTATGGTGGCTCT GGTAGCTCTGGCTCCACCGGGAGCTCCACCGCCCGGAGAAGGACGATAGGGATGACGCGG AGGTGGCCAGCCGTTCCACGTACTCCCGCAGCCAGCCGCGCGTCGCGCCCGCCGCTTCGG CCACCGCCTCGCCGGGAGGCGGTGGAGACTGCTCGGCTGCTGGCTTGTCTTCCTTGACTG CGGCGGCGCTCCTGGTTGTCATGGGCGCGGCGCGGGAGACGACGGCCTCGACCTCCTCGT CGATGTGGTAGTCGAACGTGCCGAGCGAGTAGGTGGGGCGGGCGTTGCCGCCGGTGGCCG TCGACGCGCTGCGGTTGCTGACGCTGCCCATCTCGACGCGGAAGCTCCTGGAACGGTCCC TGCTCCTCGGCTCCGGCGGCGGCGGCTGCTCGGCGGCGAGGATGGCGGAGATCGAGGGGT GCGGGAGCGTGACGGTGGCGCGGCAGAGCGGGCAGGACGGGGTGGTGCGGAGCCACGCGT CGACGCAGGCGGCGTGGAACGCGTGGCGGCACGCCGGGAGCAGCCGCAGCTCGGCGTCCA GCGTGAACGGCGACAGGCAGACGGCGCAGTCCGGTGAGCTCTTGGGGAGCGCCGCCAGCG ACGACGCCATCGTGAACAGCGGCAGCGACTCGATCAGCCGCTGCTTCTCGTCGCCCACCA CCTCCTTCTTCCCCTCACAAACCCCATTACGCCGCACCGGAGAAGCGTCCGCCGCCTCGA CGTTGTGCACCTCACGGCGCGTCCGTGGGAGCGGCGGCGGCGGCGGCGGCGGCGGCGACG ACCTGGACAGAAGTCTGAGAAGTAGGTGGATCGAGACCGACGCTAGTAGAACGAAGGCAA GAAGAGCAGCGATGATGAGGAGAGACGGGAGGAAGGACGAGGCGGCGTCGGAGGATCCGG TGACGGGATCGGCAGACGGCGGCGACGGAGACGAGAGAGTGGACGCCATGGCGAGGCTTA GCCTTAGCTTGAGAATGGTTTAACTTAACCCGCCCGGGAATGAGACCTCTCGCGCCTTTT ATCCCCGGGTTTCTTTGGAGTGCGCGGTGGTGGTGGTGCGGATGCAGAGGCCGGAAGTAA ATAGTGGCGGGTTTGCACTCTCCTGATGGAGAGATCCCAGAAATGGTGGAGGTCAGCCTT GGAAACCAATCCACGTCTCGGTTTCTACTTTTCTACCTCTGCCTGCCCTTTGCAACCTGA AATTCTGCTACTACTGCTACGTGGAAAATTTCGCATAGCAGTTGAGCAGACAGCAGCTCA ACTGTTTGCAATTCGATAGTTTGTTGCACAATAGTACAATGTTGTACACTGGTTAGTGAA CTTAAGTACGTGCAAAGAATCAAATCCGCAGTAAAAATACTGCA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)