These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9800#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2090 fasta sequence [TCTTCCTTCCGTTCCTTCCCTCTATCTATCCTCCGCCTCGTCCTCGCCACGCGCGAAGGCGGCGTCGATCGGTTCCCCCATTTTTCTCATCGATCCCTCGTGGCCTCCTCCCCGCCGCCGCGCCACCTCGTCTCGAAGATTTCTTTGATGCGTGGTGGCAGTGGCGTTTGGATCTTGGTGCCGCCATGAGTCCGCCGGGGAGGAAGGCCCCGGCCGGTGCGGGCGGGATCCGTCGGTGGCTCTCCACCGTCGTCGTGTCGGTGGTGGCTCTTGTGCTAACCCTAGTAGTGATATCGCTATCGGTGGGCTCGTCTCTGACCGGGGCATCGCTACACGAGTACCTCTTTGTCAGACCTAGTGATTCATCCAAGCTTACTGATGGGAACATGAATGGTACTGCCGTTGGTGTTCCATTACAAGAGGAAGTGTTGCAGGGTGGCAAGGAAGTACCCGTGGAGCACGGTGTTCAGAGTGGCGGCGTGAATTCGAGCGAGACGGGTGAAATCGATACCAAAGTACAAGATCCAGTTGTTACCGATGATACCGCGTCAGTGCCTGATGAGAGAAATCTCCCTGTCTCATCGGATTCATCCGACAATCTTCAGAAGACTAATGAAGGTAGCTGTGATCTATACCATGGACATTGGGTTTTTGATTCTTCTGGACCACTATACACAAACAACTCTTGCCCGATCATCACGCAGATGCAGAATTGTCAAGGAAATGGTCGACCTGATAAGGATTATGAAAATTATAGATGGAAACCAGAACAGTGCATCCTACCACGCTTTGATGGACCAAAGTTCCTGGAGTTGATGAGAGGCAAGACAATTGCATTTGTTGGTGATTCAGTTGCCAGAAATCAGATGGAATCCCTCCTCTGCATTCTGTGGCAGGTAGAGGCCCCAGTAAACCGTGGTAGCCGCAGGATGAGCAAGTGGATTTTTAGGTCAACCTCAACAATTATCGTCCGCATCTGGTCGTCTTGGTTAGTGCACAGGTCAACTGAAGCTGTGGGGTTTGCTCCTAAGGGTATCGATAAGGTTTTCCTGGATATCCCGGATGAGACCTTTATGGAATTTATCCCACGTTTTGATGTGCTTGTCCTCTCCTCTGGGCACTGGTTTGCCAAACGGTCTGCTTATATCCTGAATGGCAATGTTGTTGGAGGGCAGCTCTGGTGGCCTCGTAAAGCTGGAAATATGCAGATCAACAATGTTGATGCTTTTGGTATATCTGTTGAGACATGCCTAACTGCTCTAGCTACCAATCCAAATTTCACAGGTATAGCTATCGTGCGCACATATTCACCAGATCATTATGAAGGTGGGGCTTGGAATACCGGTGGATCATGCACTGGAAAGACTAAGCCCTTGGATGTGGTGGTGAGGAATGGATTCACGGACACCATGTATGGAAAGCAGGTTTCAGGGTTCACAAAAGCAGTGCAGAATTCTGGGAAACATGGTTCCAGGTTGAAATTGATGGACATCACTGAGCCCTTTGCCCTGAGGCCTGATGGGCATCCTGGTCCATATAGAAGTACTGACCCAAACAAGAAGACGCAAAGAGGTCCAGATGGAAG-GCCTCCACCTCAGGATTGCCTACATTGGTGCATGCCAGGACCTGTAGATACATGGAATGAGATGTTGCTAGAGACCATACGAAGAGAGTTCGAGGGAGTGAGAAGCTGAAGAAAAACACTCATTGGCTGCTTGATTTCTATCATGTGATACGACCTGCAAAAACTAATTAAGCTTCTAGCATTGGTGTATACCTCATTACATATCGTGTTGTTGTTCTCCCACAGATAGGAAGGAAATATAGCTTTTGGTTGGACAAAAAAACAAATTGTAGGCATGTTGTCAACAGTCGGGATAGAAGTACAGAGGGGTAGACAGTTAGAGAGAGAGGTTATGATGGATGATACTGTGCAATTGATCTGTATCTAGTTTTTTGTCTGACACATTCTTGGAGATATGATCCGTTGACGAATTTTGTGGAACTACATATGATCTCATATCTCGAGCACCTGTCAATCTATGAGGCAGATGCTGATTTTGGTTTATAACAGATGAAAGAGAACTGTT] [+] EMBL AK102791 [TCTTCCTTCCGTTCCTTCCCTCTATCTATCCTCCGCCTCGTCCTCGCCACGCGCGAAGGCGGCGTCGATCGGTTCCCCCATTTTTCTCATCGATCCCTCGTGGCCTCCTCCCCGCCGCCGCGCCACCTCGTCTCGAAGATTTCTTTGATGCGTGGTGGCAGTGGCGTTTGGATCTTGGTGCCGCCATGAGTCCGCCGGGGAGGAAGGCCCCGGCCGGTGCGGGCGGGATCCGTCGGTGGCTCTCCACCGTCGTCGTGTCGGTGGTGGCTCTTGTGCTAACCCTAGTAGTGATATCGCTATCGGTGGGCTCGTCTCTGACCGGGGCATCGCTACACGAGTACCTCTTTGTCAGACCTAGTGATTCATCCAAGCTTACTGATGGGAACATGAATGGTACTGCCGTTGGTGTTCCATTACAAGAGGAAGTGTTGCAGGGTGGCAAGGAAGTACCCGTGGAGCACGGTGTTCAGAGTGGCGGCGTGAATTCGAGCGAGACGGGTGAAATCGATACCAAAGTACAAGATCCAGTTGTTACCGATGATACCGCGTCAGTGCCTGATGAGAGAAATCTCCCTGTCTCATCGGATTCATCCGACAATCTTCAGAAGACTAATGAAGGTAGCTGTGATCTATACCATGGACATTGGGTTTTTGATTCTTCTGGACCACTATACACAAACAACTCTTGCCCGATCATCACGCAGATGCAGAATTGTCAAGGAAATGGTCGACCTGATAAGGATTATGAAAATTATAGATGGAAACCAGAACAGTGCATCCTACCACGCTTTGATGGACCAAAGTTCCTGGAGTTGATGAGAGGCAAGACAATTGCATTTGTTGGTGATTCAGTTGCCAGAAATCAGATGGAATCCCTCCTCTGCATTCTGTGGCAGGTAGAGGCCCCAGTAAACCGTGGTAGCCGCAGGATGAGCAAGTGGATTTTTAGGTCAACCTCAACAATTATCGTCCGCATCTGGTCGTCTTGGTTAGTGCACAGGTCAACTGAAGCTGTGGGGTTTGCTCCTAAGGGTATCGATAAGGTTTTCCTGGATATCCCGGATGAGACCTTTATGGAATTTATCCCACGTTTTGATGTGCTTGTCCTCTCCTCTGGGCACTGGTTTGCCAAACGGTCTGCTTATATCCTGAATGGCAATGTTGTTGGAGGGCAGCTCTGGTGGCCTCGTAAAGCTGGAAATATGCAGATCAACAATGTTGATGCTTTTGGTACATCTGTTGAGACATGCCTAACTGCTCTAGCTACCAATCCAAATTTCACAGGTATAGCTATCGTGCGCACATATTCACCAGATCATTATGAAGGTGGGGCTTGGAATACCGGTGGATCATGCACTGGAAAGACTAAGCCCTTGGATGTGGTGGTGAGGAATGGATTCACGGACACCATGTATGGAAAGCAGGTTTCAGGGTTCACAAAAGCAGTGCAGAATTCTGGGAAACATGGTTCCAGGTTGAAATTGATGGACATCACTGAGCCCTTTGCCCTGAGGCCTGATGGGCATCCTGGTCCATATAGAAGTACTGACCCAAACAAGAAGACGCAAAGAGGTCCAGATGGAAG GCCTCCACCTCAGGATTGCCTACATTGGTGCATGCCAGGACCTGTAGATACATGGAATGAGATGTTGCTAGAGACCATACGAAGAGAGTTCGAGGGAGTGAGAAGCTGAAGAAAAACACTCATTGGCTGCTTGATTTCTATCATGTGATACGACCTGCAAAAACTAATTAAGCTTCTAGCATTGGTGTATACCTCATTACATATCGTGTTGTTGTTCTCCCACAGATAGGAAGGAAATATAGCTTTTGGTTGGACAAAAAAACAAATTGTAGGCATGTTGTCAACAGTCGGGATAGAAGTACAGAGGGGTAGACAGTTAGAGAGAGAGGTTATGATGGATGATACTGTGCAATTGATCTGTATCTAGTTTTTTGTCTGACACATTCTTGGAGATATGATCCGTTGACGAATTTTGTGGAACTACATATGATCTCATATCTCGAGCACCTGTCAATCTATGAGGCAGATGCTGATTTTGGTTTATAACAGATGAAAGA ] [+] EMBL CB621279 [ GTTCCTTCCCTCTATCTATCCTCCGCCTCGTCCTCGCCACGCGCGAAGGCGGCGTCGATCGGTTCCCCCATTTTTCTCATCGATCCCTCGTGGCCTCCTCCCCGCCGCCGCGCCACCTCGTCTCGAAGATTTCTTTGATGCGTGGTGGCAGTGGCGTTTGGATCTTGGTGCCGCCATGAGTCCGCCGGGGAGGAAGGCCCCGGCCGGTGCGGGCGGGATCCGTCGGTGGCTCTCCACCGTCGTCGTGTCGGTGGTGGCTCTTGTGCTAACCCTAGTAGTGATATCGCTATCGGTGGGCTCGTCTCTGACCGGGGCATCGCTACACGAGTACCTCTTTGTCAGACCTAGTGATTCATCCAAGCTTACTGATGGGAACATGAATGGTACTGCCGTTGGTGTTCCATTACAAGAGGAAGTGTTGCAGGGTGGCAAGGAAGTACCCGTGGAGCACGGTGTTCAGAGTGGCGGCGTGAATTCGAGCGAGACGGGTGAAATCGATACCAAAGTACAAGATCCAGCTGTTACCGATGATACCGCGTCAGTGCCTGATGAGGGAAATCTCCCTGTCTCATCGGATTCATCCGACAATCTTCAGAAGACTAATGAAGGTAGCTGTGATCTATACCATGGACATTGGGTTTTTGATTCTTCTGGACCACTATACACAAACAACTCTTGCCCGATCATCACGCAGATGCAGAATTGTCAAGGAAATGGTCGACCTGATAAGGATTATGAAAATTATAGATGGAAACCAGAAC ] [+] EMBL CB669603 [ TGCCCGATCCT TCGCAGATGCAGAATTGTCAAGGAAATGGTCGACCTGATAAGGATTATGAAAATTATAGATGGAAACCAGAACAGTGCATCCTACCACGCTTTGATGGACCAAAGTTCCTGGAGTTGATGAGAGGCAAGACAATTGCATTTGTTGGTGATTCAGTTGCCAGAAATCAGATGGAATCCCTCCTCTGCATTCTGTGGCAGGTAGAGGCCCCAGTAAACCGTGGTAGCCGCAGGATGAGCAAGTGGATTTTTAGGTCAACCTCAACAATTATCGTCCGCATCTGGTCGTCTTGGTTAGTGCACAGGTCAACTGAAGCTGTGGGGTTTGCTCCTAAGGGTATCGATAAGGTTTTCCTGGATATCCCGGATGAGACCTTTATGGAATTTATCCCACGTTTTGATGTGCTTGTCCTCTCCTCTGGGCACTGGTTTGCCAAACGGTCTGCTTATATCCTGAATGGCAATGTTGTTGGAGGGCAGCTCTGGTGGCCTCGTAAAGCTGGAAATATGCAGATCAACAATGTTGATGCTTTTGGTATATCTGTTGAGACATGCCTAACTGCTCTAGCTACCAATCCAAATTTCACAGGTATAGCTATCGTGCGCACATATTCACCAGATCATTATGAAGGTGGGGCTTGGAATACCGGTGGATCATGCACTGGAAAGACTAAGCCCTTGGATGTGGTGGTGAGGAATGGATTCACGGACACCATGTATGGAAAGCANGTTTCAGGGTTCACAAAAGCAGTGCAGAATTCTGGGAAACATGGTTCCAGGTTGAAAATGATGGACATCACTGAGCCCTTTGCCCTGAAGC ] [-] EMBL CB621280 [ AATATGCAGATCAACAATGTTGATGCTTTTGGTATATCTGTTGAGACATGCCTAACTGCTCTAGCTACCAATCCAAATTTCACAGGTATAGCTATCGTGCGCACATATTCACCAGATCATTATGAAGGTGGGGCTTGGAATACCGGTGGATCATGCACTGGAAAGACTAAGCCCTTGGATGTGGTGGTGAGGAATGGATTCACGGACACCATGTATGGAAAGCAGGTTTCAGGGTTCACAAAAGCAGTGCAGAATTCTGGGAAACATGGTTCCAGGTTGAAATTGATGGACATCACTGAGCCCTTTGCCCTGAGGCCTGATGGGCATCCTGGTCCATATAGAAGTACTGACCCAAACAAGAAGACGCAAAGAGGTCCAGATGGAAG GCCTCCACCTCAGGATTGCCTACATTGGTGCATGCCAGGACCTGTAGATACATGGAATGAGATGTTGCTAGAGACCATACGAAGAGAGTTCGAGGGAGTGAGAAGCTGAAGAAAAACACTCATTGGCTGCTTGATTTCTGTCATGTGATACGACCTGCAAAAACTAATTAAGCTTCTAGCATTGGTGTATACCTCATTACATATCGTGTTGTTGTTCTCCCACAGATAGGAAGGAAATATAGCTTTTGGTTGGACAAAAAAACAAATTGTAGGCATGTTGTCAACAGTCGGGATAGAAGTACATAGGGGTAGACAGTTAGAGAGAGAGGTTATGATGGATGATACTGTGCAATTGATCTGTATCTAGTTTTTTGTCTGACACATTCTTGGAGATATGATCCGTTGACGA ] [-] EMBL CB669604 [ TGCACTGGAAAGACTAAGCCCTTGGATGTGGTGGTGAGGAATGGATTCACGGACACCATGTATGGAAAGCAGGTTTCAGGGTTCACAAAAGCAGTGCAGAATTCTGGGAAACATGGTTCCAGGTTGAAATTGATGGACATCACTGAGCCCTTTGCCCTGAGGCCTGATGGGCATCCTGGTCCATATAGAAGTACTGACCCAAACAAGAAGACGCAAAGAGGTCCAGATGGAAG GCCTCCACCTCAGGATTGCCTACATTGGTGCATGCCAGGACCTGTAGATACATGGAATGAGATGTTGCTAGAGACCATACGAAGAGAGTTCGAGGGAGTGAGAAGCTGAAGAAAAACACTCATTGGCTGCTTGATTTCTATCATGTGATACGACCTGCAAAAACTAATTAAGCTTCTAGCATTGGTGTATACCTCATTACATATCGTGTTGTTGTTCTCCCACAGATAGGAAGGAAATATAGCTTTTGGTTGGACAAAAAAACAAATTGTAGGCATGTTGTCAACAGTCGGGATAGAAGTACAGAGGGGTAGACAGTTAGAGAGAGAGGTTATGATGGATGATACTGTGCAATTGATCTGTATCTAGTTTTTTGTCTGACACATTCTTGGAGATATGATCCGTTGACGAATTTTGTGGAACTACATATGATCTCATATCTCGAGCACCTGTCAATCTATGAGGCAGATGCAAAGTTTGGTTTATAACAGATGAAAGAGAACTGTT] [+] EMBL BM419570 [ ACGCAAAGAGGTCCAGATGGAAGNGCCTCCCCCTCAGGATTGCCTACATTGGTGCATGCCAGGACCTGTAGATACATGGAATGAGATGTTGCTAGAGACCATACGAAGAGAGTTCGAGGGAGTGAGAAGCTGAAGAAAAACACTCATTGGCTGCTTGATTTCTGTCATGTGATACGACCTGCAAAAACTAATTAAGCTTCTAGCATTGGTGTATACCTCATTACATATCGTGTTGTTGTTCTCCCACAGATAGGAAGGAAATATAGCTTTTGGTTGGACAAAAAAACAAATTGTAGGCATGTTGTCAACAGTCGGGATAGAAGTACATAGGGGTAGACAGTTAGAGAGAGAGGTTATGATGGATGATACTGTGCAATTGATCTGTATCTAGTTTTTTGTCTGACACATTCTTGGAGATATGATCCGTTGACGAATTTTGTGGAAaaaaaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||