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Oryza sativa
cluster # 9803 cluster # 9803       Sequences # 6       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9803#0 length = 2391 sequences # 4  
consensus_9803#1 length = 790 sequences # 2  

consensusID : consensus_9803#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2391
fasta sequence
                              [CCCCTGGCCCGGAAGCAAACGGGGAGCAGCAATGGAGAAGAGACGCCGGCTCGTCGTCGCCGGCGACGGCGAGGGGGACGGCGGCGAGGCCTCCGGCAGCGCCGCGCGCGGCCTGGTGGAGAGCCTCCCGGAGGCGCTCCTCGTGGAGGTGGTCGTCAGGCTGGAGCTGGAGGCCGCGTGCTCGGCCGCGTCGTCCTGCCGCGCCCTCCGCGCCGCCGCCGCCGCCGCCTTCTCCGCCGTCACCTCCCTCGACCTATCGATGTTCCCGCCGACGAATGCCATCCTGAATAGGATTCTCGCGGGCAATGGCGCGCTCCGCTGCCTCGCCGTCAACTGCAGCCTCCTCGATGACTCCGCGGTGGGCGCCATCGCGAAGGGAAGCCTCCGCGAGCTCTCGCTGCTCAAGTGCTCGTCCTTCTCCTCGTACCTCTTTGTGGCAGTTGGTGAGAGATGCAAAAATTTGAGATCATTTGTGCTGGAGATGGCAGCTTCAGATGATGATGAACATTTCGGGATCTGCCGAAAGTCCATAGCACACATCGTCAAAGGATGCGGTTACCTGGAGGTGAGGAATCTTTGTTGCAGATGAACCCCAATACTGTTCTTCGCGTACATATATGGTCAGTTCATAGCAATATAATATTTTGTAAATAATATTTTAGGCTGAGAATGTGTGAATACTAAAGTATAGATAACATAATATTAGCCATATTATTTTAACAATGACATGGAACTCTTTGAAAAGTTAATCTGGTCGGATAATCTAATCTGACGTTCTTTTCTCTCCATGCAGAATCTTTCACTCAAGTTCTTTCCTCTGCTAGGTCCAGGCTCCGTTGATTTTGAGTCATTGGTACCCATTCCTAGTACCATCAAGGTACTATTGCTACAGCCTGTGTCGAATTGGCAGGCAAAGAGGCTATTTCCTATAAGCACAAGTCTGAAGACATCTATTAGCAACACTCTAGAATCACTCTCTTTAGTTCTTGACATAATAACTGATGAACTTGTTGCGTTCATCACTGGGAGTCTCCATAACTTAGTTGAGTTGTGCCTAGAAGATAACCCAATGAAAGAACCAGATTTGCACAATGACCTGACAAACGTTGGGCTCCAAGCACTTGGGTTATGCCACAACCTGGCACATTTATCTCTGACACGTGGTAAGCAGAATTGTTCGTCCACCTTCAGAAGGGTAACTGACTTTGGGATAATGATGCTTGCTGACGGATGCAAGCAACTGAAAACCATTAGACTTGCTGGGTTTTCTAAAGTGAGGGATGCTGGGTATGCAGCCCTTCTTCAGTCTTGCAAGGACCTGAAGAAATTTGAGGTCAGTACTGGATACTTGTCAGATTTGACATGTCTTGATCTTGATGAGGCAGCTCCAAAGATTACGGAAGTGAGGTTGCTGTGCTGTAGTCTATTAACCAGTGAAACAGCCATCTCACTCTCATCCTGCACCAAGTTGGAAGTTCTAGACCTATCAGGTTGCAGGAGCATCGCAGACTCTGGGTTGGCTTCTATTTCGCAGCTTTCGAAGCTAACACTATTGGATCTTGCTGGAGCTGACATTACCGATGCAGGATTATCTGCACTCGGTAATGGGCGGTGCCCAATGTCTTCATTATGTTTGAGAGGTTGCAAAAGGATCAGCAACAATGGCATAGCTTCTTTGTTGTGCGGGAGTGGCACCATCAACAAAACTCTAATCTCACTGGATATCGGGAATGTACCTAGAATATCAGGCAGAGCTGTCACGTTGATTGCCAAGAACTGCGAGCAGATCAGCAGCCTCTGCCTCCGGAACTGCCTCCTCATCAATGATTCTTCTCTTGAAACTCTAGGTTCTATGCGTCACAATTTGGGTAAAAGTTCCCTAAGAATGCTGGATCTCTCCTATTGTTCTAGGCTGTCACGTAATTTCCTGGGACTATTTGAGCCGCCATTT-TTTAGGGGCCTGAGGTGGCTTGGTGTTGGGAAGAACATGTTGGAACGCCGTGGCTGCAGTCCAACTGTCGCGGAGCTCCTGGAGCGAAAGCCTGGATTAACAGTCTGTGGCAACGCCTGCGAGATGGGCTGCAGGAATCAGTGCCATCCTGACATTCGAAGGCAATAAACCGAAGATTGTCGTTCGGGTTTGATTCTGTAATTCCTTCATCCGTTCTGT-AACATAACTGTGGAACATCTCT-TGC-GTTTGTAGGTTAGAA-GGGGCTGTTCTTTA-GGATTTGTTGGTTTGCTCTGCACTTGTAGATTGTAAACAAGGAACAGCTCTTAGGATTGGTTGGTTTTCTTTGCACTTGTAGATTGTAAACAAGGAGCTGTTCTTAGGATTGGTCGGCTGCTTGTGTCCTGTAATAAAGTAATGAATTCTTATTGGAAAAAAAAAGA]

[+] EMBL AK099866             [CCCCTGGCCCGGAAGCAAACGGGGAGCAGCAATGGAGAAGAGACGCCGGCTCGTCGTCGCCGGCGACGGCGAGGGGGACGGCGGCGAGGCCTCCGGCAGCGCCGCGCGCGGCCTGGTGGAGAGCCTCCCGGAGGCGCTCCTCGTGGAGGTGGTCGTCAGGCTGGAGCTGGAGGCCGCGTGCTCGGCCGCGTCGTCCTGCCGCGCCCTCCGCGCCGCCGCCGCCGCCGCCTTCTCCGCCGTCACCTCCCTCGACCTATCGATGTTCCCGCCGACGAATGCCATCCTGAATAGGATTCTCGCGGGCAATGGCGCGCTCCGCTGCCTCGCCGTCAACTGCAGCCTCCTCGATGACTCCGCGGTGGGCGCCATCGCGAAGGGAAGCCTCCGCGAGCTCTCGCTGCTCAAGTGCTCGTCCTTCTCCTCGTACCTCTTTGTGGCAGTTGGTGAGAGATGCAAAAATTTGAGATCATTTGTGCTGGAGATGGCAGCTTCAGATGATGATGAACATTTCGGGATCTGCCGAAAGTCCATAGCACACATCGTCAAAGGATGCGGTTACCTGGAGGTGAGGAATCTTTGTTGCAGATGAACCCCAATACTGTTCTTCGCGTACATATATGGTCAGTTCATAGCAATATAATATTTTGTAAATAATATTTTAGGCTGAGAATGTGTGAATACTAAAGTATAGATAACATAATATTAGCCATATTATTTTAACAATGACATGGAACTCTTTGAAAAGTTAATCTGGTCGGATAATCTAATCTGACGTTCTTTTCTCTCCATGCAGAATCTTTCACTCAAGTTCTTTCCTCTGCTAGGTCCAGGCTCCGTTGATTTTGAGTCATTGGTACCCATTCCTAGTACCATCAAGGTACTATTGCTACAGCCTGTGTCGAATTGGCAGGCAAAGAGGCTATTTCCTATAAGCACAAGTCTGAAGACATCTATTAGCAACACTCTAGAATCACTCTCTTTAGTTCTTGACATAATAACTGATGAACTTGTTGCGTTCATCACTGGGAGTCTCCATAACTTAGTTGAGTTGTGCCTAGAAGATAACCCAATGAAAGAACCAGATTTGCACAATGACCTGACAAACGTTGGGCTCCAAGCACTTGGGTTATGCCACAACCTGGCACATTTATCTCTGACACGTGGTAAGCAGAATTGTTCGTCCACCTTCAGAAGGGTAACTGACTTTGGGATAATGATGCTTGCTGACGGATGCAAGCAACTGAAAACCATTAGACTTGCTGGGTTTTCTAAAGTGAGGGATGCTGGGTATGCAGCCCTTCTTCAGTCTTGCAAGGACCTGAAGAAATTTGAGGTCAGTACTGGATACTTGTCAGATTTGACATGTCTTGATCTTGATGAGGCAGCTCCAAAGATTACGGAAGTGAGGTTGCTGTGCTGTAGTCTATTAACCAGTGAAACAGCCATCTCACTCTCATCCTGCACCAAGTTGGAAGTTCTAGACCTATCAGGTTGCAGGAGCATCGCAGACTCTGGGTTGGCTTCTATTTCGCAGCTTTCGAAGCTAACACTATTGGATCTTGCTGGAGCTGACATTACCGATGCAGGATTATCTGCACTCGGTAATGGGCGGTGCCCAATGTCTTCATTATGTTTGAGAGGTTGCAAAAGGATCAGCAACAATGGCATAGCTTCTTTGTTGTGCGGGAGTGGCACCATCAACAAAACTCTAATCTCACTGGATATCGGGAATGTACCTAGAATATCAGGCAGAGCTGTCACGTTGATTGCCAAGAACTGCGAGCAGATCAGCAGCCTCTGCCTCCGGAACTGCCTCCTCATCAATGATTCTTCTCTTGAAACTCTAGGTTCTATGCGTCACAATTTGGGTAAAAGTTCCCTAAGAATGCTGGATCTCTCCTATTGTTCTAGGCTGTCACGTAATTTCCTGGGACTATTTGAGCCGCCATTT TTTAGGGGCCTGAGGTGGCTTGGTGTTGGGAAGAACATGTTGGAACGCCGTGGCTGCAGTCCAACTGTCGCGGAGCTCCTGGAGCGAAAGCCTGGATTAACAGTCTGTGGCAACGCCTGCGAGATGGGCTGCAGGAATCAGTGCCATCCTGACTTTCGAAGGCAATAAACCGAAGATTGTCGTTCGGGTTTGATTCTGTAATTCCTTCATCCGTTCTGT AACATAACTGTGGAACATCTCT TGC GTTTGTAGGTTAGAA GGGGCTGTTCTTTA GGATTTGTTGGTTTGCTCTGCACTTGTAGATTGTAAACAAGGAACAGCTCTTAGGATTGGTTGGTTTTCTTTGCACTTGTAGATTGTAAACAAGGAGCTGTTCTTAGGATTGGTCGGCTGCTTGTGTCCTGTAATAAAGTAATGAA                     ]
[-] EMBL CB674458             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TTATCTGCACTCGGTAATGGGCGGTGCCCAATGTCTTCATTATGTTTGAGAGGTTGCAAAAGGATCAGCAACAATGGCATAGCTTCTTTGTTGTGCGGGAGTGGCACCATCAACAAAACTCTAATCTCACTGGATATCGGGAATGTACCTAGAATATCAGGCAGAGCTGTCACGTTGATTGCCAAGAACTGCGAGCAGATCAGCAGCCTCTGCCTCCGGAACTGCCTCCTCATCAATGATTCTTCTCTTGAAACTCTAGGTTCTATGCGTCACAATTTGGGTAAAAGTTCCCTAAGAATGCTGGATCTCTCCTATTGTTCTAGGCTGTCACGTAATTTCCTGGGACTATTTGAGCCGCCATTT TTTAGGGGCCTGAGGTGGCTTGGTGTTGGGAAGAACATGTTGGAACGCCGTGGCTGCAGTCCAACTGTCGCGGAGCTCCTGGAGCGAAAGCCTGGATTAACAGTCTGTGGCAACGCCTGCGAGATGGGCTGCAGGAATCAGTGCCATCCTGACATTCGAAGGCAATAAACCGAAGATTGTCGTTCGGGTTTGATTCTGTAATTCCTTCATCCGTTCTGT AACATAACTGTGGAACATCTCT TGC GTTTGTAGGTTAGAA GGGGCTGTTCTTTA GGATTTGTTGGTTTGCTCTGCACTTGTAGATTGTAAACAAGGAACAGCTCTTAGGATTGGTTGGTTTTCTTTGCACTTGTAGATTGTAAACAAGGAGCTGTTCTTAGGATTGGTCGGCTGCTTGTGTCCTGTAATAAAGTAATGAATTCTTATTGGAAAAAAAAAGA]
[-] EMBL CB644242             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GCGGTGCCCAATGTCTTCATTATGTTGNAGAGGTTGCAAAAGGATCAGCAACAATGGCATAGCTTCTTTGTTGTGCGGGAGTGGCACCATCAACAAAACTCTAATCTCACTGGATATCGGGAATGTACCTAGAATATCAGGCAGAGCTGTCACGTTGATTGCCAAGAACTGCGAGCAGATCAGCAGCCTCTGCCTCCGGAACTGCCTCCTCATCAATGATTCTTCTCTTGAAACTCTAGGTTCTATGCGTCACAATTTGGGTAAAAGTTCCCTAAGAATGCTGGATCTCTCCTATTGTTCTAGGCTGTCACGTAATTTCCTGGGACTATTTGAGCCGCCATTT TTTAGGGGCCTGAGGTGGCTTGGTGTTGGGAAGAACATGTTGGAACGCCGTGGCTGCAGTCCAACTGTCGCGGAGCTCCTGGAGCGAAAGCCTGGATTAACAGTCTGTGGCAACGCCTGCGAGATGGGCTGCAGGAATCAGTGCCATCCTGACATTCGAAGGCAATAAACCGAAGATTGTCGTTCGGGTTTGATTCTGTAATTCCTTCATCCGTTCTGT AACATAACTGTGGAACATCTCT TGC GTTTGTAGGTTAGAA GGGGCTGTTCTTTA GGATTTGTTGGTTTGCTCTGCACTTGTAGATTGTAAACAAGGAACAGCTCTTAGGATTGGTTGGTTTTCTTTGCACTTGTAGATTGTAAACAAGGAGCTGTTCTTAGGATTGGTCGGCTGCTTGTGTCCTGTAATAAAGTAATGAATTCTTATTGGAAAttt     ]
[+] EMBL BM421016             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CTAGGCTGTCACGTAATTTCCTGGGACTATTTGA CCGCCATTTCTTTAGGGGCCTGAGGTGGCTTGGTGTTGGGAAGAACATGTTGGAACGCCGTGGCTGCAGTCCAACTGTCGCGGAGCTCCTGGAGCGAAAGCCTGGATTAACAGTCTGTGGCAACGCCTGCGAGATGGGCTGCAGGAATCAGTGCCATCCTGACATTCGAAGGCAATAAACCGAAGATTGTCGTTCGGGTTTGATTCTGTAATTCCTTCATCCGTTCTGTGAACATAACTGTGGAACATCTCTCTGCAGTTTGTAGGTTAGAACGGGGCTGTTCTTTACGGATTTGTTGGTTTGCTCTGCACTTGTAGATTGTAAACAAGGAACAGCTCTTAGGATTGGTTGGTTTTCTTTGCACTTGTAGATTGTAAACAAGGAGCTGTTCTTAGGATTGGTCGGCTGCTTGTGTCCTGTAATAAAGTAATGAATTCTTATTGGAAAAAA     ]


>consensus_9803#0 CCCCTGGCCCGGAAGCAAACGGGGAGCAGCAATGGAGAAGAGACGCCGGCTCGTCGTCGC CGGCGACGGCGAGGGGGACGGCGGCGAGGCCTCCGGCAGCGCCGCGCGCGGCCTGGTGGA GAGCCTCCCGGAGGCGCTCCTCGTGGAGGTGGTCGTCAGGCTGGAGCTGGAGGCCGCGTG CTCGGCCGCGTCGTCCTGCCGCGCCCTCCGCGCCGCCGCCGCCGCCGCCTTCTCCGCCGT CACCTCCCTCGACCTATCGATGTTCCCGCCGACGAATGCCATCCTGAATAGGATTCTCGC GGGCAATGGCGCGCTCCGCTGCCTCGCCGTCAACTGCAGCCTCCTCGATGACTCCGCGGT GGGCGCCATCGCGAAGGGAAGCCTCCGCGAGCTCTCGCTGCTCAAGTGCTCGTCCTTCTC CTCGTACCTCTTTGTGGCAGTTGGTGAGAGATGCAAAAATTTGAGATCATTTGTGCTGGA GATGGCAGCTTCAGATGATGATGAACATTTCGGGATCTGCCGAAAGTCCATAGCACACAT CGTCAAAGGATGCGGTTACCTGGAGGTGAGGAATCTTTGTTGCAGATGAACCCCAATACT GTTCTTCGCGTACATATATGGTCAGTTCATAGCAATATAATATTTTGTAAATAATATTTT AGGCTGAGAATGTGTGAATACTAAAGTATAGATAACATAATATTAGCCATATTATTTTAA CAATGACATGGAACTCTTTGAAAAGTTAATCTGGTCGGATAATCTAATCTGACGTTCTTT TCTCTCCATGCAGAATCTTTCACTCAAGTTCTTTCCTCTGCTAGGTCCAGGCTCCGTTGA TTTTGAGTCATTGGTACCCATTCCTAGTACCATCAAGGTACTATTGCTACAGCCTGTGTC GAATTGGCAGGCAAAGAGGCTATTTCCTATAAGCACAAGTCTGAAGACATCTATTAGCAA CACTCTAGAATCACTCTCTTTAGTTCTTGACATAATAACTGATGAACTTGTTGCGTTCAT CACTGGGAGTCTCCATAACTTAGTTGAGTTGTGCCTAGAAGATAACCCAATGAAAGAACC AGATTTGCACAATGACCTGACAAACGTTGGGCTCCAAGCACTTGGGTTATGCCACAACCT GGCACATTTATCTCTGACACGTGGTAAGCAGAATTGTTCGTCCACCTTCAGAAGGGTAAC TGACTTTGGGATAATGATGCTTGCTGACGGATGCAAGCAACTGAAAACCATTAGACTTGC TGGGTTTTCTAAAGTGAGGGATGCTGGGTATGCAGCCCTTCTTCAGTCTTGCAAGGACCT GAAGAAATTTGAGGTCAGTACTGGATACTTGTCAGATTTGACATGTCTTGATCTTGATGA GGCAGCTCCAAAGATTACGGAAGTGAGGTTGCTGTGCTGTAGTCTATTAACCAGTGAAAC AGCCATCTCACTCTCATCCTGCACCAAGTTGGAAGTTCTAGACCTATCAGGTTGCAGGAG CATCGCAGACTCTGGGTTGGCTTCTATTTCGCAGCTTTCGAAGCTAACACTATTGGATCT TGCTGGAGCTGACATTACCGATGCAGGATTATCTGCACTCGGTAATGGGCGGTGCCCAAT GTCTTCATTATGTTTGAGAGGTTGCAAAAGGATCAGCAACAATGGCATAGCTTCTTTGTT GTGCGGGAGTGGCACCATCAACAAAACTCTAATCTCACTGGATATCGGGAATGTACCTAG AATATCAGGCAGAGCTGTCACGTTGATTGCCAAGAACTGCGAGCAGATCAGCAGCCTCTG CCTCCGGAACTGCCTCCTCATCAATGATTCTTCTCTTGAAACTCTAGGTTCTATGCGTCA CAATTTGGGTAAAAGTTCCCTAAGAATGCTGGATCTCTCCTATTGTTCTAGGCTGTCACG TAATTTCCTGGGACTATTTGAGCCGCCATTTTTTAGGGGCCTGAGGTGGCTTGGTGTTGG GAAGAACATGTTGGAACGCCGTGGCTGCAGTCCAACTGTCGCGGAGCTCCTGGAGCGAAA GCCTGGATTAACAGTCTGTGGCAACGCCTGCGAGATGGGCTGCAGGAATCAGTGCCATCC TGACATTCGAAGGCAATAAACCGAAGATTGTCGTTCGGGTTTGATTCTGTAATTCCTTCA TCCGTTCTGTAACATAACTGTGGAACATCTCTTGCGTTTGTAGGTTAGAAGGGGCTGTTC TTTAGGATTTGTTGGTTTGCTCTGCACTTGTAGATTGTAAACAAGGAACAGCTCTTAGGA TTGGTTGGTTTTCTTTGCACTTGTAGATTGTAAACAAGGAGCTGTTCTTAGGATTGGTCG GCTGCTTGTGTCCTGTAATAAAGTAATGAATTCTTATTGGAAAAAAAAAGA



consensusID : consensus_9803#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 790
fasta sequence
                              [AAGCACACGGGGAGCAGCAATGGAGAAGAGACGCCGGCTCGTCGTCGCCGGCGACGGCGAGGGGGACGGCGGCGAGGCCTCCGGCAGCGCCGCGCGCGGCCTGGTGGAGAGCCTCCCGGAGGCGCTCCTCGTGGAGGTGGTCGTCAGGCTGGAGCTGGAGGCCGCGTGCTCGGCCGCGTCGTCCTGCCGCGCCCTCCGCGCCGCCGCCGCCGCCGCCTTCTCCGCCGTCACCTCCCTCGACCTATCGATGTTCCCGCCGACGAATGCCATCCTGAATAGGATTCTCGCGGGCAATGGCGCGCTCCGCTGCCTCGCCGTCAACTGCAGCCTCCTCGATGACTCCGCGGTGGGCGCCATCGCGAAGGGAAGCCTCCGCGAGCTCTCGCTGCTCAAGTGCTCGTCCTTCTCCTCGTACCTCTTTGTGGCAGTTGGTGAGAGATGCAAAAATTTGAGATCATTTGTGCTGGAGATGGCAGCTTCACATGCTGATGAACATTTCGGGATCTGCCGAAAGTCCATAGCACACATCGTCAAAGGATGCGGTTACCTGGAGAATCTTTCACTCAAGTTCTTTCCTCTGCTAGGTCCAGGCTCCGTTGATTTTGAGTCATTGGTACCCATTCCTAGTACCATCACGGTACTATTGCTACAGCCTGTGTCGAATTGGCAGGCAGAGAGGCTATTTCCTATAAGCACAAGTCTGAAGACATCTATTAGCAACACTCTAGAATCACTCTCTTTAGTTCTTGACATAATAACTGATGAACTTGTTGCGTTCATCACTGGGAGT]

[+] EMBL CB644241             [AAGCACACGGGGAGCAGCAATGGAGAAGAGACGCCGGCTCGTCGTCGCCGGCGACGGCGAGGGGGACGGCGGCGAGGCCTCCGGCAGCGCCGCGCGCGGCCTGGTGGAGAGCCTCCCGGAGGCGCTCCTCGTGGAGGTGGTCGTCAGGCTGGAGCTGGAGGCCGCGTGCTCGGCCGCGTCGTCCTGCCGCGCCCTCCGCGCCGCCGCCGCCGCCGCCTTCTCCGCCGTCACCTCCCTCGACCTATCGATGTTCCCGCCGACGAATGCCATCCTGAATAGGATTCTCGCGGGCAATGGCGCGCTCCGCTGCCTCGCCGTCAACTGCAGCCTCCTCGATGACTCCGCGGTGGGCGCCATCGCGAAGGGAAGCCTCCGCGAGCTCTCGCTGCTCAAGTGCTCGTCCTTCTCCTCGTACCTCTTTGTGGCAGTTGGTGAGAGATGCAAAAATTTGAGATCATTTGTGCTGGAGATGGCAGCTTCACATGCTGATGAACATTTCGGGATCTGCCGAAAGTCCATAGCACACATCGTCAAAGGATGCGGTTACCTGGAGAATCTTTCACTCAAGTTCTTTCCTCTGCTAGGTCCAGGCTCCGTTGATTTTGAGTCATTGGTACCCATTCCTAGTACCATCACGGTACTATTGCTACAGCCTGTGTCGAATTGGCAGGCAGAGAGGCTATTT                                                                                                         ]
[+] EMBL CB674457             [  GCAAACGGGGAGCAGCAATGGAGAAGAGACGCCGGCTCGTCGTCGCCGGCGACGGCGAGGGGGACGGCGGCGAGGCCTCCGGCAGCGCCGCGCGCGGCCTGGTGGAGAGCCTCCCGGAGGCGCTCCTCGTGGAGGTGGTCGTCAGGCTGGAGCTGGAGGCCGCGTGCTCGGCCGCGTCGTCCTGCCGCGCCCTCCGCGCCGCCGCCGCCGCCGCCTTCTCCGCCGTCACCTCCCTCGACCTATCGATGTTCCCGCCGACGAATGCCATCCTGAATAGGATTCTCGCGGGCAATGGCGCGCTCCGCTGCCTCGCCGTCAACTGCAGCCTCCTCGATGACTCCGCGGTGGGCGCCATCGCGAAGGGAAGCCTCCGCGAGCTCTCGCTGCTCAAGTGCTCGTCCTTCTCCTCGTACCTCTTTGTGGCAGTTGGTGAGAGATGCAAAAATTTGAGATCATTTGTGCTGGAGATGGCAGCTTCAGATGATGATGAACATTTCGGGATCTGCCGAAAGTCCATAGCACACATCGTCAAAGGATGCGGTTACCTGGAGAATCTTTCACTCAAGTTCTTTCCTCTGCTAGGTCCAGGCTCCGTTGATTTTGAGTCATTGGTACCCATTCCTAGTACCATCAAGGTACTATTGCTACAGCCTGTGTCGAATTGGCAGGCAAAGAGGCTATTTCCTATAAGCACAAGTCTGAAGACATCTATTAGCAACACTCTAGAATCACTCTCTTTAGTTCTTGACATAATAACTGATGAACTTGTTGCGTTCATCACTGGGAGT]


>consensus_9803#1 AAGCACACGGGGAGCAGCAATGGAGAAGAGACGCCGGCTCGTCGTCGCCGGCGACGGCGA GGGGGACGGCGGCGAGGCCTCCGGCAGCGCCGCGCGCGGCCTGGTGGAGAGCCTCCCGGA GGCGCTCCTCGTGGAGGTGGTCGTCAGGCTGGAGCTGGAGGCCGCGTGCTCGGCCGCGTC GTCCTGCCGCGCCCTCCGCGCCGCCGCCGCCGCCGCCTTCTCCGCCGTCACCTCCCTCGA CCTATCGATGTTCCCGCCGACGAATGCCATCCTGAATAGGATTCTCGCGGGCAATGGCGC GCTCCGCTGCCTCGCCGTCAACTGCAGCCTCCTCGATGACTCCGCGGTGGGCGCCATCGC GAAGGGAAGCCTCCGCGAGCTCTCGCTGCTCAAGTGCTCGTCCTTCTCCTCGTACCTCTT TGTGGCAGTTGGTGAGAGATGCAAAAATTTGAGATCATTTGTGCTGGAGATGGCAGCTTC ACATGCTGATGAACATTTCGGGATCTGCCGAAAGTCCATAGCACACATCGTCAAAGGATG CGGTTACCTGGAGAATCTTTCACTCAAGTTCTTTCCTCTGCTAGGTCCAGGCTCCGTTGA TTTTGAGTCATTGGTACCCATTCCTAGTACCATCACGGTACTATTGCTACAGCCTGTGTC GAATTGGCAGGCAGAGAGGCTATTTCCTATAAGCACAAGTCTGAAGACATCTATTAGCAA CACTCTAGAATCACTCTCTTTAGTTCTTGACATAATAACTGATGAACTTGTTGCGTTCAT CACTGGGAGT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9803#0      CCCCTGGCCCGGAAGCAAACGGGGAGCAGCAATGGAGAAGAGACGCCGGCTCGTCGTCGC 60
consensus_9803#1      ------------AAGCACACGGGGAGCAGCAATGGAGAAGAGACGCCGGCTCGTCGTCGC 48
                                  ***** ******************************************

consensus_9803#0      CGGCGACGGCGAGGGGGACGGCGGCGAGGCCTCCGGCAGCGCCGCGCGCGGCCTGGTGGA 120
consensus_9803#1      CGGCGACGGCGAGGGGGACGGCGGCGAGGCCTCCGGCAGCGCCGCGCGCGGCCTGGTGGA 108
                      ************************************************************

consensus_9803#0      GAGCCTCCCGGAGGCGCTCCTCGTGGAGGTGGTCGTCAGGCTGGAGCTGGAGGCCGCGTG 180
consensus_9803#1      GAGCCTCCCGGAGGCGCTCCTCGTGGAGGTGGTCGTCAGGCTGGAGCTGGAGGCCGCGTG 168
                      ************************************************************

consensus_9803#0      CTCGGCCGCGTCGTCCTGCCGCGCCCTCCGCGCCGCCGCCGCCGCCGCCTTCTCCGCCGT 240
consensus_9803#1      CTCGGCCGCGTCGTCCTGCCGCGCCCTCCGCGCCGCCGCCGCCGCCGCCTTCTCCGCCGT 228
                      ************************************************************

consensus_9803#0      CACCTCCCTCGACCTATCGATGTTCCCGCCGACGAATGCCATCCTGAATAGGATTCTCGC 300
consensus_9803#1      CACCTCCCTCGACCTATCGATGTTCCCGCCGACGAATGCCATCCTGAATAGGATTCTCGC 288
                      ************************************************************

consensus_9803#0      GGGCAATGGCGCGCTCCGCTGCCTCGCCGTCAACTGCAGCCTCCTCGATGACTCCGCGGT 360
consensus_9803#1      GGGCAATGGCGCGCTCCGCTGCCTCGCCGTCAACTGCAGCCTCCTCGATGACTCCGCGGT 348
                      ************************************************************

consensus_9803#0      GGGCGCCATCGCGAAGGGAAGCCTCCGCGAGCTCTCGCTGCTCAAGTGCTCGTCCTTCTC 420
consensus_9803#1      GGGCGCCATCGCGAAGGGAAGCCTCCGCGAGCTCTCGCTGCTCAAGTGCTCGTCCTTCTC 408
                      ************************************************************

consensus_9803#0      CTCGTACCTCTTTGTGGCAGTTGGTGAGAGATGCAAAAATTTGAGATCATTTGTGCTGGA 480
consensus_9803#1      CTCGTACCTCTTTGTGGCAGTTGGTGAGAGATGCAAAAATTTGAGATCATTTGTGCTGGA 468
                      ************************************************************

consensus_9803#0      GATGGCAGCTTCAGATGATGATGAACATTTCGGGATCTGCCGAAAGTCCATAGCACACAT 540
consensus_9803#1      GATGGCAGCTTCACATGCTGATGAACATTTCGGGATCTGCCGAAAGTCCATAGCACACAT 528
                      ************* *** ******************************************

consensus_9803#0      CGTCAAAGGATGCGGTTACCTGGAGGTGAGGAATCTTTGTTGCAGATGAACCCCAATACT 600
consensus_9803#1      CGTCAAAGGATGCGGTTACCTGGAG----------------------------------- 553
                      *************************                                   

consensus_9803#0      GTTCTTCGCGTACATATATGGTCAGTTCATAGCAATATAATATTTTGTAAATAATATTTT 660
consensus_9803#1      ------------------------------------------------------------
                                                                                  

consensus_9803#0      AGGCTGAGAATGTGTGAATACTAAAGTATAGATAACATAATATTAGCCATATTATTTTAA 720
consensus_9803#1      ------------------------------------------------------------
                                                                                  

consensus_9803#0      CAATGACATGGAACTCTTTGAAAAGTTAATCTGGTCGGATAATCTAATCTGACGTTCTTT 780
consensus_9803#1      ------------------------------------------------------------
                                                                                  

consensus_9803#0      TCTCTCCATGCAGAATCTTTCACTCAAGTTCTTTCCTCTGCTAGGTCCAGGCTCCGTTGA 840
consensus_9803#1      -------------AATCTTTCACTCAAGTTCTTTCCTCTGCTAGGTCCAGGCTCCGTTGA 600
                                   ***********************************************

consensus_9803#0      TTTTGAGTCATTGGTACCCATTCCTAGTACCATCAAGGTACTATTGCTACAGCCTGTGTC 900
consensus_9803#1      TTTTGAGTCATTGGTACCCATTCCTAGTACCATCACGGTACTATTGCTACAGCCTGTGTC 660
                      *********************************** ************************

consensus_9803#0      GAATTGGCAGGCAAAGAGGCTATTTCCTATAAGCACAAGTCTGAAGACATCTATTAGCAA 960
consensus_9803#1      GAATTGGCAGGCAGAGAGGCTATTTCCTATAAGCACAAGTCTGAAGACATCTATTAGCAA 720
                      ************* **********************************************

consensus_9803#0      CACTCTAGAATCACTCTCTTTAGTTCTTGACATAATAACTGATGAACTTGTTGCGTTCAT 1020
consensus_9803#1      CACTCTAGAATCACTCTCTTTAGTTCTTGACATAATAACTGATGAACTTGTTGCGTTCAT 780
                      ************************************************************

consensus_9803#0      CACTGGGAGTCTCCATAACTTAGTTGAGTTGTGCCTAGAAGATAACCCAATGAAAGAACC 1080
consensus_9803#1      CACTGGGAGT-------------------------------------------------- 790
                      **********                                                  

consensus_9803#0      AGATTTGCACAATGACCTGACAAACGTTGGGCTCCAAGCACTTGGGTTATGCCACAACCT 1140
consensus_9803#1      ------------------------------------------------------------
                                                                                  

consensus_9803#0      GGCACATTTATCTCTGACACGTGGTAAGCAGAATTGTTCGTCCACCTTCAGAAGGGTAAC 1200
consensus_9803#1      ------------------------------------------------------------
                                                                                  

consensus_9803#0      TGACTTTGGGATAATGATGCTTGCTGACGGATGCAAGCAACTGAAAACCATTAGACTTGC 1260
consensus_9803#1      ------------------------------------------------------------
                                                                                  

consensus_9803#0      TGGGTTTTCTAAAGTGAGGGATGCTGGGTATGCAGCCCTTCTTCAGTCTTGCAAGGACCT 1320
consensus_9803#1      ------------------------------------------------------------
                                                                                  

consensus_9803#0      GAAGAAATTTGAGGTCAGTACTGGATACTTGTCAGATTTGACATGTCTTGATCTTGATGA 1380
consensus_9803#1      ------------------------------------------------------------
                                                                                  

consensus_9803#0      GGCAGCTCCAAAGATTACGGAAGTGAGGTTGCTGTGCTGTAGTCTATTAACCAGTGAAAC 1440
consensus_9803#1      ------------------------------------------------------------
                                                                                  

consensus_9803#0      AGCCATCTCACTCTCATCCTGCACCAAGTTGGAAGTTCTAGACCTATCAGGTTGCAGGAG 1500
consensus_9803#1      ------------------------------------------------------------
                                                                                  

consensus_9803#0      CATCGCAGACTCTGGGTTGGCTTCTATTTCGCAGCTTTCGAAGCTAACACTATTGGATCT 1560
consensus_9803#1      ------------------------------------------------------------
                                                                                  

consensus_9803#0      TGCTGGAGCTGACATTACCGATGCAGGATTATCTGCACTCGGTAATGGGCGGTGCCCAAT 1620
consensus_9803#1      ------------------------------------------------------------
                                                                                  

consensus_9803#0      GTCTTCATTATGTTTGAGAGGTTGCAAAAGGATCAGCAACAATGGCATAGCTTCTTTGTT 1680
consensus_9803#1      ------------------------------------------------------------
                                                                                  

consensus_9803#0      GTGCGGGAGTGGCACCATCAACAAAACTCTAATCTCACTGGATATCGGGAATGTACCTAG 1740
consensus_9803#1      ------------------------------------------------------------
                                                                                  

consensus_9803#0      AATATCAGGCAGAGCTGTCACGTTGATTGCCAAGAACTGCGAGCAGATCAGCAGCCTCTG 1800
consensus_9803#1      ------------------------------------------------------------
                                                                                  

consensus_9803#0      CCTCCGGAACTGCCTCCTCATCAATGATTCTTCTCTTGAAACTCTAGGTTCTATGCGTCA 1860
consensus_9803#1      ------------------------------------------------------------
                                                                                  

consensus_9803#0      CAATTTGGGTAAAAGTTCCCTAAGAATGCTGGATCTCTCCTATTGTTCTAGGCTGTCACG 1920
consensus_9803#1      ------------------------------------------------------------
                                                                                  

consensus_9803#0      TAATTTCCTGGGACTATTTGAGCCGCCATTTTTTAGGGGCCTGAGGTGGCTTGGTGTTGG 1980
consensus_9803#1      ------------------------------------------------------------
                                                                                  

consensus_9803#0      GAAGAACATGTTGGAACGCCGTGGCTGCAGTCCAACTGTCGCGGAGCTCCTGGAGCGAAA 2040
consensus_9803#1      ------------------------------------------------------------
                                                                                  

consensus_9803#0      GCCTGGATTAACAGTCTGTGGCAACGCCTGCGAGATGGGCTGCAGGAATCAGTGCCATCC 2100
consensus_9803#1      ------------------------------------------------------------
                                                                                  

consensus_9803#0      TGACATTCGAAGGCAATAAACCGAAGATTGTCGTTCGGGTTTGATTCTGTAATTCCTTCA 2160
consensus_9803#1      ------------------------------------------------------------
                                                                                  

consensus_9803#0      TCCGTTCTGTAACATAACTGTGGAACATCTCTTGCGTTTGTAGGTTAGAAGGGGCTGTTC 2220
consensus_9803#1      ------------------------------------------------------------
                                                                                  

consensus_9803#0      TTTAGGATTTGTTGGTTTGCTCTGCACTTGTAGATTGTAAACAAGGAACAGCTCTTAGGA 2280
consensus_9803#1      ------------------------------------------------------------
                                                                                  

consensus_9803#0      TTGGTTGGTTTTCTTTGCACTTGTAGATTGTAAACAAGGAGCTGTTCTTAGGATTGGTCG 2340
consensus_9803#1      ------------------------------------------------------------
                                                                                  

consensus_9803#0      GCTGCTTGTGTCCTGTAATAAAGTAATGAATTCTTATTGGAAAAAAAAAGA 2391
consensus_9803#1      ---------------------------------------------------
                                                                         




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)