|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9810#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2131 fasta sequence
[CTACGCTAATTAATCCAGCAGCTTAGCTTAGCATAGCTTATCTATGGTTTGCCACGTCTTCTCGTCCTTCTCCTCCTCCCTAATTCGTGTGCTGGAGGCGCCGCTGCTCCTTCCAGCTGCTTCGGCTTCTTCTTCTTCTTCTTCTTCTCCGGCGAGCCGGAGCGGTGGCCGCCGCCGCCGTGCAGCCCACGTCCGCCCTTCGCCGGCGATCTATCCCGGCCGCCAAGAACTTGCCTCTCACTCATCCATGCTACCCACCGACTTCGACATCAAGGTGTTGATTGAGCGGCACGAAGCCCTGACGGACGACGTGCAGGAGATGCTGCAGCATCAACGCCGGCGACACCAGAAGACGGCGAGCGGCGGCCGGGAGCGGATAGCCACCGTCGACCACCTCAGGCGCCTCTGCATGGACCACTACTTCCAAGACGAGGTCGACGACGCCATGGACGCCTGCCTGCTCGAGGAGCTCGCCCATGGCGGCGACCTGCTTGACGCCACCCTCGCCTTCCGCCTCATGAGAGAAGCTGGCCACCATGTCTCAGCAGATGAGGTTCTTGGAAGATTCACAGATGATAATGGCGAATTCAGGCTCGATTACAGAAAGGACATCAGAGGGTTACTCAGCCTGCAAGACATATCACACATGAACATTGGACAAGAAGCCTCACTCTGCAAGGCAAAGGAGTTCTCAACCAGGAACCTTGAATCTGCCATCAACTACCTCGAGCCAAATCTTGCAAGATATGTGAGGCAGTCGCTGGATCATCCCTACCATGTCAGCCTGAATCAGTACAAGGCCAGGCACCATCTCAGCTACCTCCAGACCTTGCCTATCCGGTGCACTGCCATGGAGGAGCTCGCACTTGCAGACTTCCAGCTCAACAAGCTACTCCATCAGATGGAGATGCAGGAGATCAAAAGATGGTGGATGGACCTGGGATTGGCTCAAGAAATACCAGTTGCCAGGGACCAGGTTCAGAAATGGTTTGTGTGGATGATGACAGCCATCCAGGGTGCCTCCTTGTCAAGATGCAGAATTGAACTCACAAAGATCGTCTCCTTTGTCTATATTGTGGATGATATTTTTGATCTGGTTGGCACACGTGAGGAGCTCTCCTGCTTCACTCAGGCAATCAGAATGTGGGACCTTGCAGCTGCTGATTCCTTACCTAGCTGCATGAGATCATGCTTCAGGGCTCTACACACAGTTACAAATGACATCGCAGATATGGTCGAGAGAGAACATGGAGTAAACCCTATCAATCATCTGAAGAAAGCTTGGGCAATGCTGTTTGATGGATTCATGACAGAGACAAAATGGTTGTCTGCTGGCCAGGTTCCTGACTCAGAGGAATACCTAAGAAATGGAGTTGTCACCTCAGGAGTGCCACTTGTATTTGTACACCTGCTGTTCATGCTAGGGCATGATGTGAGCCAAAATGCAGCAGAGTTTGTTGATCACATCCCTCCTGTCATCTCCTGCCCAGCAAAAATCTTGAGACTCTGGGATGACCTGGGCAGTGCCAAGGATGAGGCACAAGAAGGATTGGACGGATCGTACAAGGAGCTATACCTCAAGGAGAACCCGGGGCTCGCCGCTGGCGAGGCGGAGGAGCACGTGCGGCGGCTGATCGCGGGCGAGTGGGAGGAGCTCAACCGGGAGTGCTTCTCCGCTAGCCCCAGTAGATCGTCGCCGGCGACGACCTTCCCCGCCGGCTTCACGCAGGCGGCGCTCAACGCCGCCAGGATGGTCGGCGTCATGTATGGCTACGACGGCGAGCGGCGGCTCCCCGTCCTCGACGACTACGTCAGGATGCTGCTCTTCTGAATTCGATCGATTGATTCGACCTGAATTTTAATTTCATCCATGTATGAACCTCATCATCGTCCATGCATAATGGCGTGTAGAGATTAATTGTGGATTAGGTCTTTGTAAATAGGATTATAGTTAGTTGAGTGAGGGAGATAGTACTGGTCGATTTTGTAGTAAATAAATATGATGAATTTTTACTCCCTCCATTATACATATTATAAGGTGTTTTAGTTTTTTTTTCCTATGATAAACTAATTTCAAATTGAATGAATTTGGGCATGTAATTTATTGCCAAAGTTTCAAAAAAAAAGGAAA]
[+] EMBL AK110925 [CTACGCTAATTAATCCAGCAGCTTAGCTTAGCATAGCTTATCTATGGTTTGCCACGTCTTCTCGTCCTTCTCCTCCTCCCTAATTCGTGTGCTGGAGGCGCCGCTGCTCCTTCCAGCTGCTTCGGCTTCTTCTTCTTCTTCTTCTTCTCCGGCGAGCCGGAGCGGTGGCCGCCGCCGCCGTGCAGCCCACGTCCGCCCTTCGCCGGCGATCTATCCCGGCCGCCAAGAACTTGCCTCTCACTCATCCATGCTACCCACCGACTTCGACATCAAGGTGTTGATTGAGCGGCACGAAGCCCTGACGGACGACGTGCAGGAGATGCTGCAGCATCAACGCCGGCGACACCAGAAGACGGCGAGCGGCGGCCGGGAGCGGATAGCCACCGTCGACCACCTCAGGCGCCTCTGCATGGACCACTACTTCCAAGACGAGGTCGACGACGCCATGGACGCCTGCCTGCTCGAGGAGCTCGCCCATGGCGGCGACCTGCTTGACGCCACCCTCGCCTTCCGCCTCATGAGAGAAGCTGGCCACCATGTCTCAGCAGATGAGGTTCTTGGAAGATTCACAGATGATAATGGCGAATTCAGGCTCGATTACAGAAAGGACATCAGAGGGTTACTCAGCCTGCAAGACATATCACACATGAACATTGGACAAGAAGCCTCACTCTGCAAGGCAAAGGAGTTCTCAACCAGGAACCTTGAATCTGCCATCAACTACCTCGAGCCAAATCTTGCAAGATATGTGAGGCAGTCGCTGGATCATCCCTACCATGTCAGCCTGAATCAGTACAAGGCCAGGCACCATCTCAGCTACCTCCAGACCTTGCCTATCCGGTGCACTGCCATGGAGGAGCTCGCACTTGCAGACTTCCAGCTCAACAAGCTACTCCATCAGATGGAGATGCAGGAGATCAAAAGATGGTGGATGGACCTGGGATTGGCTCAAGAAATACCAGTTGCCAGGGACCAGGTTCAGAAATGGTTTGTGTGGATGATGACAGCCATCCAGGGTGCCTCCTTGTCAAGATGCAGAATTGAACTCACAAAGATCGTCTCCTTTGTCTATATTGTGGATGATATTTTTGATCTGGTTGGCACACGTGAGGAGCTCTCCTGCTTCACTCAGGCAATCAGAATGTGGGACCTTGCAGCTGCTGATTCCTTACCTAGCTGCATGAGATCATGCTTCAGGGCTCTACACACAGTTACAAATGACATCGCAGATATGGTCGAGAGAGAACATGGAGTAAACCCTATCAATCATCTGAAGAAAGCTTGGGCAATGCTGTTTGATGGATTCATGACAGAGACAAAATGGTTGTCTGCTGGCCAGGTTCCTGACTCAGAGGAATACCTAAGAAATGGAGTTGTCACCTCAGGAGTGCCACTTGTATTTGTACACCTGCTGTTCATGCTAGGGCATGATGTGAGCCAAAATGCAGCAGAGTTTGTTGATCACATCCCTCCTGTCATCTCCTGCCCAGCAAAAATCTTGAGACTCTGGGATGACCTGGGCAGTGCCAAGGATGAGGCACAAGAAGGATTGGACGGATCGTACAAGGAGCTATACCTCAAGGAGAACCCGGGGCTCGCCGCTGGCGAGGCGGAGGAGCACGTGCGGCGGCTGATCGCGGGCGAGTGGGAGGAGCTCAACCGGGAGTGCTTCTCCGCTAGCCCCAGTAGATCGTCGCCGGCGACGACCTTCCCCGCCGGCTTCACGCAGGCGGCGCTCAACGCCGCCAGGATGGTCGGCGTCATGTATGGCTACGACGGCGAGCGGCGGCTCCCCGTCCTCGACGACTACGTCAGGATGCTGCTCTTCTGAATTCGATCGATTGATTCGACCTGAATTTTAATTTCATCCATGTATGAACCTCATCATCGTCCATGCATAATGGCGTGTAGAGATTAATTGTGGATTAGGTCTTTGTAAATAGGATTATAGTTAGTTGAGTGAGGGAGATAGTACTGGTCGATTTTGTAGTAAATAAATATGATGAATTTTTACTCCC ]
[+] EMBL CB619021 [ ACCGCCTTCCACCTCAGGCGCCTCTGCATGGACCACTACTTCCAAGACGAGGTCGACGACGCCATGGACGCCTGCCTGCTCGAGGAGCTCGCCCATGGCGGCGACCTGCTTGACGCCACCCTCGCCTTCCGCCTCATGAGAGAAGCTGGCCACCATGTCTCAGCAGATGAGGTTCTTGGAAGATTCACAGATGATAATGGCGAATTCAGGCTCGATTACAGAAAGGACATCAGAGGGTTACTCAGCCTGCAAGACATATCACACATGAACATTGGACAAGAAGCCTCACTCTGCAAGGCAAAGGAGTTCTCAACCAGGAACCTTGAATCTGCCATCAACTACCTCGAGCCAAATCTTGCAAGATATGTGAGGCAGTCGCTGGATCATCCCTACCATGTCAGCCTGAATCAGTACAAGGCCAGGCACCATCTCAGCTACCTCCAGACCTTGCCTATCCGGTGCACTGCCATGGAGGAGCTCGCACTTGCAGACTTCCAGCTCAACAAGCTACTCCATCAGATGGAGATGCAGGAGATCAAAAGATGGTGGATGGACCTGGGATTGGCTCAAGAAATACCAGTTGCCAGGGACCAGGTTCAGAAATGGTTTGTGTGGATGATGACAGCCATCCAGGGTGCCTCCTTGTCAAGATGCAGAATTGAACTCACAAAGATCGTCTCCTTTGTCTATATTGTGGATGATATTTTT ]
[-] EMBL CB619022 [ GTTGTCACCTCAGGAGTGCCCCTTGTATTTGTACACCTGCTGTTCATGCTAGGGCATGATGTGAGCCAAAATGCAGCAGAGTTTGTTGATCACATCCCTCCTGTCATCTCCTGCCCAGCAAAAATCTTGAGACTCTGGGATGACCTGGGCAGTGCCAAGGATGAGGCACAAGAAGGATTGGACGGATCGTACAAGGAGCTATACCTCAAGGAGAACCCGGGGCTCGCCGCTGGCGAGGCGGAGGAGCACGTGCGGCGGCTGATCGCGGGCGAGTGGGAGGAGCTCAACCGGGAGTGCTTCTCCGCTAGCCCCAGTAGATCGTCGCCGGCGACGACCTTCCCCGCCGGCTTCACGCAGGCGGCGCTCAACGCCGCCAGGATGGTCGGCGTCATGTATGGCTACGACGGCGAGCGGCGGCTCCCCGTCCTCGACGACTACGTCAGGATGCTGCTCTTCTGAATTCGATCGATTGATTCGACCTGAATTTTAATTTCATCCATGTATGAACCTCATCATCGTCCATGCATAATGGCGTGTAGAGATTAATTGTGGATTAGGTCTTTGTAAATAGGATTATAGTTAGTTGAGTGAGGGAGATAGTACTGGTCGATTTTGTAGTAAATAAATATGATGAATTTTTACTCCCTCCATTATACATATTATAAGGTGTTTTAGTTTTTTTTTCCTATGATAAACTAATTTCAAATTGAATGAATTTGGGCATGTAATTTATTGCCAAAGTTTCAAAAAAAAAGGAAA]
consensusID : consensus_9810#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 736 fasta sequence
[AACACATCGCTTGATACCACAAACTATAGCTATATTGCTGCATGCAGTAGAGCTGAGATTACGTTAAGCACACAAAAAGCAAGTCTCGATCAATGGCTTCTCATGTCTTCTTCTCCCTGGAGCCATCGCTCCTACCGGTAGCCGCTGCTGCTGCACCGGCGGCCGGCGACGGTGGCCGGAGGAGAGGCCGCCGCCGTGCGGATGGCCGCTTCCGCCCTTCGCCGGCGATCCACCCTGGTCGACCAGAGCTCGCCTCTCACTTGATGTTGCCCAATGAATTGGACATACAGGGCTTCATGGAGCGCCTGGATGGCCTGACGAACGACGTGCAGGAGATGCTGCTGCATCAACGGCGGCGTCAGAGGAGTAGTACGGCGAACGGCGGCGGCGGCGACGGCGGCGCCCGGGAGAGGATGGCCACCGTCGACCACCTGAAGCGCCTCTGCATCGACCACTACTTCCAGGACGAGGTCGACGGCGCCATGGATGCCCACCTCGAGGAGCTCGCCCATGGCGGCGACCTGCTCGATGCCACCCTCGCGTTCCGGCTGATGAGAGAAGCAGGACACCATGTCTCACCAGATGAGGTTCTTGGAAGATTCACAGATGGAAATGGCGATTTCAGCATGGCTTACAGCAAGGACATCAGAGGGCTACTCAGCCTGCAAGACATATCACACATGAACATAGGAGCAGAGGCCTCACTCTACAAAGCAAAGGAGTTCACAAGCAGAAA]
[+] EMBL CB619061 [AACACATCGCTTGATACCACAAACTATAGCTATATTGCTGCATGCAGTAGAGCTGAGATTACGTTAAGCACACAAAAAGCAAGTCTCGATCAATGGCTTCTCATGTCTTCTTCTCCCTGGAGCCATCGCTCCTACCGGTAGCCGCTGCTGCTGCACCGGCGGCCGGCGACGGTGGCCGGAGGAGAGGCCGCCGCCGTGCGGATGGCCGCTTCCGCCCTTCGCCGGCGATCCACCCTGGTCGACCAGAGCTCGCCTCTCACTTGATGTTGCCCAATGAATTGGACATACAGGGCTTCATGGAGCGCCTGGATGGCCTGACGAACGACGTGCAGGAGATGCTGCTGCATCAACGGCGGCGTCAGAGGAGTAGTACGGCGAACGGCGGCGGCGGCGACGGCGGCGCCCGGGAGAGGATGGCCACCGTCGACCACCTGAAGCGCCTCTGCATCGACCACTACTTCCAGGACGAGGTCGACGGCGCCATGGATGCCCACCTCGAGGAGCTCGCCCATGGCGGCGACCTGCTCGATGCCACCCTCGCGTTCCGGCTGATGAGAGAAGCAGGACACCATGTCTCACCAGATGAGGTTCTTGGAAGATTCACAGATGGAAATGGCGATTTCAGCATGGCTTACAGCAAGGACATCAGAGGGCTACTCAGCCTGCAAGACATATCACACATGAACATAGGAGCAGAGGCCTCACTCTACAAAGCAAAGGAGTTCACAAGCAGAAA]
consensusID : consensus_9810#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 716 fasta sequence
[CCAGATACCGGATTGAGCTCACAAAGATCGCCTCCTTTGTCTACATTATGGATGACATCTTTGATCTTGTCAGCACACAAGAGGAGCGCTCCTGCTTCACACAGGCAATCAAAATGTGGGACTTTGCAGCTGCTGATTCCTTGCCTAGCTGCATGAGGTCATGCTACAGGGCTATTTACACTGTTACAAATGATATCGCAGATATGGTCGAGAGAGAACACGGAGTAAACCCTATCAATCATTTGAAGAAAGCTTGGGCAGTGCTGTTTGATGGATTAATGACTGAGGCAAAATGGTTGACCTATAGTCATGTTCCCTCCTCAGAGGATTACCTAAGAAATGGTGTTATCACTTCAGGAGTACCACTTATGTTTTTACACTTATTATTCATGCTAGGGCATGATGCAGCAGAGCTCATTGACAACATCCCTCCTGTCATCTCCTGCCCAGCAAAAATCTTCAGACTCTGGGATGACATAGGCAACGCCAAGGAAGGGTTGGATGGATCATACAAGGAGTTGTACCTCAGGGAGAACCCGGGGCTCGCCGCCAGCGAAGCGGAGGAGCACATGCGCGGCTTGATCACCAGGGAGTGGGAGAAGCTCAACCGTGAGAGCTTCTTCTCCGGGAAGGCCTTCCCCGCCAGCTTCACGCAGGCGGCGCTCAATGCCGCCAGGATGGTCGGCGTCATGCACGGCCACGACGGCGAGCAGAGG]
[-] EMBL CB619062 [CCAGATACCGGATTGAGCTCACAAAGATCGCCTCCTTTGTCTACATTATGGATGACATCTTTGATCTTGTCAGCACACAAGAGGAGCGCTCCTGCTTCACACAGGCAATCAAAATGTGGGACTTTGCAGCTGCTGATTCCTTGCCTAGCTGCATGAGGTCATGCTACAGGGCTATTTACACTGTTACAAATGATATCGCAGATATGGTCGAGAGAGAACACGGAGTAAACCCTATCAATCATTTGAAGAAAGCTTGGGCAGTGCTGTTTGATGGATTAATGACTGAGGCAAAATGGTTGACCTATAGTCATGTTCCCTCCTCAGAGGATTACCTAAGAAATGGTGTTATCACTTCAGGAGTACCACTTATGTTTTTACACTTATTATTCATGCTAGGGCATGATGCAGCAGAGCTCATTGACAACATCCCTCCTGTCATCTCCTGCCCAGCAAAAATCTTCAGACTCTGGGATGACATAGGCAACGCCAAGGAAGGGTTGGATGGATCATACAAGGAGTTGTACCTCAGGGAGAACCCGGGGCTCGCCGCCAGCGAAGCGGAGGAGCACATGCGCGGCTTGATCACCAGGGAGTGGGAGAAGCTCAACCGTGAGAGCTTCTTCTCCGGGAAGGCCTTCCCCGCCAGCTTCACGCAGGCGGCGCTCAATGCCGCCAGGATGGTCGGCGTCATGCACGGCCACGACGGCGAGCAGAGG]
consensusID : consensus_9810#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 423 fasta sequence
[ACGCCGAGCGTGCATTCCCCGGTCCCTCGAGCGACCGTACGTCACGTGATTCCGTAGTCTCTTCTGAATTGCGATTCCGATTGATTGCNGACCCTGAATGTGTTGAATGTGTGCACTGCCATTGCGTTATGGAACCTGCATCATCGTGCCATCGCATNACATGGGCGTGCGTACGAGGATTAATTGGTGGATTAGGTGCTCTTCGTGAAATAGGATTATAGTTGAGTTCGAGTCGACGGGACGATGAGTACTGGTCGATTTTGTAGTAAATCAATATGATGAATGTTTTACTCCCTCCATTATACATATTATAAGGTGTTTTAGTGTTTTTTTTCCTANGATAAACTNAATTTCAAGTNGAATGAATTTGGGCATGTAATTTATTGCCCANNGTTTCATTTTGGATTACTCNTTAAAAAAAAA]
[+] EMBL BQ906354 [ACGCCGAGCGTGCATTCCCCGGTCCCTCGAGCGACCGTACGTCACGTGATTCCGTAGTCTCTTCTGAATTGCGATTCCGATTGATTGCNGACCCTGAATGTGTTGAATGTGTGCACTGCCATTGCGTTATGGAACCTGCATCATCGTGCCATCGCATNACATGGGCGTGCGTACGAGGATTAATTGGTGGATTAGGTGCTCTTCGTGAAATAGGATTATAGTTGAGTTCGAGTCGACGGGACGATGAGTACTGGTCGATTTTGTAGTAAATCAATATGATGAATGTTTTACTCCCTCCATTATACATATTATAAGGTGTTTTAGTGTTTTTTTTCCTANGATAAACTNAATTTCAAGTNGAATGAATTTGGGCATGTAATTTATTGCCCANNGTTTCATTTTGGATTACTCNTTAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9810#0 CTACGCTAATTAATCCAGCAGCTTAGCTTAGCATAGCTTATCTATGGTTTGCCACGTCTT 60
consensus_9810#2 ------------------------------------------------------------
consensus_9810#3 ------------------------------------------------------------
consensus_9810#1 ------------------------------------------------------------
consensus_9810#0 CTCGTCCTTCTCCTCCTCCCTAATTCGTGTGCTGGAGGCGCCGCTGCTCCTTCCAGCTGC 120
consensus_9810#2 ------------------------------------------------------------
consensus_9810#3 ------------------------------------------------------------
consensus_9810#1 ------------------------------------------------------------
consensus_9810#0 TTCGGCTTCTTCTTCTTCTTCTTCTTCTCCGGCGAGCCGGAGCGGTGGCCGCCGCCGCCG 180
consensus_9810#2 ------------------------------------------------------------
consensus_9810#3 ------------------------------------------------------------
consensus_9810#1 ------------------------------------------------------------
consensus_9810#0 TGCAGCCCACGTCCGCCCTTCGCCGGCGATCTATCCCGGCCGCCAAGAACTTGCCTCTCA 240
consensus_9810#2 ------------------------------------------------------------
consensus_9810#3 ------------------------------------------------------------
consensus_9810#1 ------------------------------------------------------------
consensus_9810#0 CTCATCCATGCTACCCACCGACTTCGACATCAAGGTGTTGATTGAGCGGCACGAAGCCCT 300
consensus_9810#2 ------------------------------------------------------------
consensus_9810#3 ------------------------------------------------------------
consensus_9810#1 ------------------------------------------------------------
consensus_9810#0 GACGGACGACGTGCAGGAGATGCTGCAGCATCAACGCCGGCGACACCAGAAGACGGCGAG 360
consensus_9810#2 ------------------------------------------------------------
consensus_9810#3 ------------------------------------------------------------
consensus_9810#1 ------------------------------------------------------------
consensus_9810#0 CGGCGGCCGGGAGCGGATAGCCACCGTCGACCACCTCAGGCGCCTCTGCATGGACCACTA 420
consensus_9810#2 ------------------------------------------------------------
consensus_9810#3 ------------------------------------------------------------
consensus_9810#1 ------------------------------------------------------------
consensus_9810#0 CTTCCAAGACGAGGTCGACGACGCCATGGACGCCTGCCTGCTCGAGGAGCTCGCCCATGG 480
consensus_9810#2 ------------------------------------------------------------
consensus_9810#3 ------------------------------------------------------------
consensus_9810#1 ------------------------------------------------------------
consensus_9810#0 CGGCGACCTGCTTGACGCCACCCTCGCCTTCCGCCTCATGAGAGAAGCTGGCCACCATGT 540
consensus_9810#2 ------------------------------------------------------------
consensus_9810#3 ------------------------------------------------------------
consensus_9810#1 ------------------------------------------------------------
consensus_9810#0 CTCAGCAGATGAGGTTCTTGGAAGATTCACAGATGATAATGGCGAATTCAGGCTCGATTA 600
consensus_9810#2 ------------------------------------------------------------
consensus_9810#3 ------------------------------------------------------------
consensus_9810#1 ------------------------------------------------------------
consensus_9810#0 CAGAAAGGACATCAGAGGGTTACTCAGCCTGCAAGACATATCACACATGAACATTGGACA 660
consensus_9810#2 ------------------------------------------------------------
consensus_9810#3 ------------------------------------------------------------
consensus_9810#1 ------------------------------------------------------------
consensus_9810#0 AGAAGCCTCACTCTGCAAGGCAAAGGAGTTCTCAACCAGGAACCTTGAATCTGCCATCAA 720
consensus_9810#2 ------------------------------------------------------------
consensus_9810#3 ------------------------------------------------------------
consensus_9810#1 ------------------------------------------------------------
consensus_9810#0 CTACCTCGAGCCAAATCTTGCAAGATATGTGAGGCAGTCGCTGGATCATCCCTACCATGT 780
consensus_9810#2 ------------------------------------------------------------
consensus_9810#3 ------------------------------------------------------------
consensus_9810#1 ------------------------------------------------------------
consensus_9810#0 CAGCCTGAATCAGTACAAGGCCAGGCACCATCTCAGCTACCTCCAGACCTTGCCTATCCG 840
consensus_9810#2 ------------------------------------------------------------
consensus_9810#3 ------------------------------------------------------------
consensus_9810#1 ------------------------------------------------------------
consensus_9810#0 GTGCACTGCCATGGAGGAGCTCGCACTTGCAGACTTCCAGCTCAACAAGCTACTCCATCA 900
consensus_9810#2 ------------------------------------------------------------
consensus_9810#3 ------------------------------------------------------------
consensus_9810#1 ------------------------------------------------------------
consensus_9810#0 GATGGAGATGCAGGAGATCAAAAGATGGTGGATGGACCTGGGATTGGCTCAAGAAATACC 960
consensus_9810#2 ------------------------------------------------------------
consensus_9810#3 ------------------------------------------------------------
consensus_9810#1 ------------------------------------------------------------
consensus_9810#0 AGTTGCCAGGGACCAGGTTCAGAAATGGTTTGTGTGGATGATGACAGCCATCCAGGGTGC 1020
consensus_9810#2 ------------------------------------------------------------
consensus_9810#3 ------------------------------------------------------------
consensus_9810#1 ------------------------------------------------------------
consensus_9810#0 CTCCTTGTCAAGATGCAGAATTGAACT-CACAAAGATCGTCTCCTTTGTCTATATTGTGG 1079
consensus_9810#2 --------CCAGATACCGGATTGAGCT-CACAAAGATCGCCTCCTTTGTCTACATTATGG 51
consensus_9810#3 -----------------ACGCCGAGCG-TGCATTCCCCGGTCCCTCGAGCGACCGTACG- 41
consensus_9810#1 --------------AACACATCGCTTGATACCACAAACTATAGCTATATTG-CTGCATGC 45
* * * ** *
consensus_9810#0 ATGATATTTTTGATCTGGT-TGGCACACGTGAGGAGCTCTCCTGCTTCAC-TCAGGCAAT 1137
consensus_9810#2 ATGACATCTTTGATCTTGT-CAGCACACAAGAGGAGCGCTCCTGCTTCAC-ACAGGCAAT 109
consensus_9810#3 -TCACG----TGATTCCGT-AGTCTCTTCTGAATTGCGATTCCGATTGATTGCNGACCCT 95
consensus_9810#1 AGTAGAGCTGAGATTACGTTAAGCACACAAAAAGCAAG-TCTCGATCAATGGCTTCTCAT 104
* *** ** * * * * * * * * *
consensus_9810#0 CAGAATGTGGGACCTTGCAGCTGCTGATTCCTTACCTAGC-TGCATGAGATCATGCTTCA 1196
consensus_9810#2 CAAAATGTGGGACTTTGCAGCTGCTGATTCCTTGCCTAGC-TGCATGAGGTCATGCTACA 168
consensus_9810#3 GAATGTGTTGAATGTGTGCACTGCCATTGCGTTATGGAACCTGCATCA--TCGTGCCATC 153
consensus_9810#1 G--TCTTCTTCTCCCTGGAGCCATCGCTCCTACCGGTAGC-CGC-TGCTGCTGCACCGGC 160
* * * * * * ** * *
consensus_9810#0 GGGCTCTACACACAGTTACAAATGACATCGCAGATATGGTCGAGAGAGAACATGGAGTAA 1256
consensus_9810#2 GGGCTATTTACACTGTTACAAATGATATCGCAGATATGGTCGAGAGAGAACACGGAGTAA 228
consensus_9810#3 GCATNACATGGGCGTGCGTACGAGGATTAATTGGTGGATTAGGTGCTCTTCGTGAAATAG 213
consensus_9810#1 GGCCGGCGACGGTGGCCGGAGGAGAGGCCGCCGCCGTGCGGATGGCCGCTTCCGCCCTTC 220
* * * * * *
consensus_9810#0 ACCCTATCAATCATCTGAAGAAAGCTTGGGCAATGCTGTTTGATGGATTCATGACAGAGA 1316
consensus_9810#2 ACCCTATCAATCATTTGAAGAAAGCTTGGGCAGTGCTGTTTGATGGATTAATGACTGAGG 288
consensus_9810#3 GAT-TATAGTTGAGTTCGAGTCGACG-GGACGATGAGTACTGGTCGATTTTGTAGTAAAT 271
consensus_9810#1 GCC--GGCGATCCACCCTGGTCGACCAGAGCT-CGCCTCTCACTTGAT--GTTGCCCAAT 275
* * * * * * * *** *
consensus_9810#0 CAAAATGGTTGTCTGCTGGCCAGGTTCCTGACTCAGAGGAATACCTAAGAAATGGAGTTG 1376
consensus_9810#2 CAAAATGGTTGACCTATAGTCATGTTCCCTCCTCAGAGGATTACCTAAGAAATGGTGTTA 348
consensus_9810#3 CAATATGATGAAT-----GTTTTACTCCCTCCATTA-----TACATATTATAAGGTGTTT 321
consensus_9810#1 GAATTGGACATACAGGGCTTCATGGAGCGCCTGGATGGCCTGACGAACGACGTGCAGGAG 335
** * * ** * * * *
consensus_9810#0 TCACCTCAGGAGTGCCACTTGTATTTGTACACCTGCTGTTCAT-GCTAGGGCATGATGTG 1435
consensus_9810#2 TCACTTCAGGAGTACCACTTATGTTTTTACACTTATTATTCAT-GCTAGGGCATGATG-- 405
consensus_9810#3 T-------AGTGTTTTTTTTCCTANGATAAACTNAAT-TTCAA-GTNGAATGAATTTG-- 370
consensus_9810#1 ATGCT---GCTGCATCAACGGCGGCGTCAGAGGAGTAGTACGGCGAACGGCGGCGGCGGC 392
* * * * * * *
consensus_9810#0 AGCCAAAATGCAGCAGAGTTTGTTGATCACATCCCTCCTGTCATCTCCTGCCCAGCAAAA 1495
consensus_9810#2 ----------CAGCAGAGCTCATTGACAACATCCCTCCTGTCATCTCCTGCCCAGCAAAA 455
consensus_9810#3 ---------GGCATGTAATTTATTGCCCANNGTTTCATTTTGGATTACTCNTTAAAAAAA 421
consensus_9810#1 GACGGCGGCGCCCGGGAGAGGATGGCCACCGTCGACCACCTGAAGCGCCTCTGCATCGAC 452
* * * * * *
consensus_9810#0 ATCTTGAGACTCTGGGATGACCTGGGCAGTGCCAAGGATGAGGCACAAGAAGGATTGGAC 1555
consensus_9810#2 ATCTTCAGACTCTGGGATGACATAGGCAACGCCAAGGA------------AGGGTTGGAT 503
consensus_9810#3 AA---------------------------------------------------------- 423
consensus_9810#1 CACTAC---TTCCAGGACGAGGTCGACGGCGCCATGGATGCC--------CACCTCGAGG 501
consensus_9810#0 GGATCGTACAAGGAGCTATACCTCAAGGAGAACCCGGGGCTCGCCGCTGGCGAGGCGGAG 1615
consensus_9810#2 GGATCATACAAGGAGTTGTACCTCAGGGAGAACCCGGGGCTCGCCGCCAGCGAAGCGGAG 563
consensus_9810#3 ------------------------------------------------------------
consensus_9810#1 AGCTCGCCCATGGCGGCGACCTGCTCGATGCCACCCTCGCGTTCCGGCTGATGAGAGAAG 561
consensus_9810#0 GAGCACGTGCGGCGGCTGATCGCGGGCGAGTGGGAGGAGCTCAACCGGGAGTGCTTCTCC 1675
consensus_9810#2 GAGCACATGCGCGGCTTGATCACCAGGGAGTGGGAGAAGCTCAACCGTGAGAGCTTCTTC 623
consensus_9810#3 ------------------------------------------------------------
consensus_9810#1 CAGGACACCATGTCTCACCAGATGAGGTTCTTGGAAGATTCACAGATGGAAATGGCGATT 621
consensus_9810#0 GCTAGCCCCAGTAGATCGTCGCCGGCGACGACCTTCCCCGCCGGCTTCACGCAGGCGGCG 1735
consensus_9810#2 TCCGG---------------------GAAGGCCTTCCCCGCCAGCTTCACGCAGGCGGCG 662
consensus_9810#3 ------------------------------------------------------------
consensus_9810#1 TCAGCATGGCTTACAGCAAGGACATCAGAGGGCTACTCAGCCTGCAAGACATATCACACA 681
consensus_9810#0 CTCA-ACGCCGCCAGGATGGTCGGCGTCATGTATGGCTACGACGGCGAGCGGCGGCTCCC 1794
consensus_9810#2 CTCA-ATGCCGCCAGGATGGTCGGCGTCATGCACGGCCACGACGGCGAGCAGAGG----- 716
consensus_9810#3 ------------------------------------------------------------
consensus_9810#1 TGAACATAGGAGCAGAGGCCTCACTCTACAAAGCAAAGGAGTTCACAAGCAGAAA----- 736
consensus_9810#0 CGTCCTCGACGACTACGTCAGGATGCTGCTCTTCTGAATTCGATCGATTGATTCGACCTG 1854
consensus_9810#2 ------------------------------------------------------------
consensus_9810#3 ------------------------------------------------------------
consensus_9810#1 ------------------------------------------------------------
consensus_9810#0 AATTTTAATTTCATCCATGTATGAACCTCATCATCGTCCATGCATAATGGCGTGTAGAGA 1914
consensus_9810#2 ------------------------------------------------------------
consensus_9810#3 ------------------------------------------------------------
consensus_9810#1 ------------------------------------------------------------
consensus_9810#0 TTAATTGTGGATTAGGTCTTTGTAAATAGGATTATAGTTAGTTGAGTGAGGGAGATAGTA 1974
consensus_9810#2 ------------------------------------------------------------
consensus_9810#3 ------------------------------------------------------------
consensus_9810#1 ------------------------------------------------------------
consensus_9810#0 CTGGTCGATTTTGTAGTAAATAAATATGATGAATTTTTACTCCCTCCATTATACATATTA 2034
consensus_9810#2 ------------------------------------------------------------
consensus_9810#3 ------------------------------------------------------------
consensus_9810#1 ------------------------------------------------------------
consensus_9810#0 TAAGGTGTTTTAGTTTTTTTTTCCTATGATAAACTAATTTCAAATTGAATGAATTTGGGC 2094
consensus_9810#2 ------------------------------------------------------------
consensus_9810#3 ------------------------------------------------------------
consensus_9810#1 ------------------------------------------------------------
consensus_9810#0 ATGTAATTTATTGCCAAAGTTTCAAAAAAAAAGGAAA 2131
consensus_9810#2 -------------------------------------
consensus_9810#3 -------------------------------------
consensus_9810#1 -------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||