cluster # 9815

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Oryza sativa
cluster # 9815 cluster # 9815 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9815#0 length = 1971 sequences # 6
consensusID : consensus_9815#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1971
fasta sequence
                              [CCCCTTGCAAGCCAAAATTCTGAATCTAAATCCAGCTGATTCCCATGGATTAATACTGATCCCAACAGTTCTTTGCCTTCTCCCTCCTTGCTCCAAATGGCCGGCACCGGCTTACCATTCCGGCAGGGCGCCATCTTCTTCTCAAGAGCTCATGCTGCTGCTCATCCAAGAACAAGGACTCCTCACCACCATTGCTCACCTCAGAGGACGCACGATGCGAGAGGAAGGTGCCACCTCACGGCTAAGTCCGCAAATGGACGCCCACAGATCAATGCCTCCTTCACAGATGTGGCGATAGATGGGGCACAGTCTGAAGATGGGGCGCCAAAGCAGGGAGGATCCACCGTCAACATCACCGTCGTCAGGGCCTCCGGCGATCTCGCCAAGAAGAAGATCTTTCCCGCGCTTTTCGCCCTGTACTACGAGGACTGCCTCCCGGAGCATTTTACAGTTTTTGGTTATGCTCGTATCAAGATGAGCGATGAAGAGCTCAGGAACATGATTAGCTTGACTCTGACATGCCGGATTGATCAGAGGGAGAACTGCAGTGACAAGATGGAACAGTTTCTGAAGAGATGCTTTTATCAATCTGGGCAGTACAATTCAGAGGAAGGGTTTTCTGAACTGGACAGAAAGCTAAAAGAAAAGGAGGCTGGCAAGGTACCAAACAGGCTCTTTTACCTGTCGATTCCACCGAACATATTTGTCGATGTGGTGAGATCTGCTAGTCGCACAGCATCATCTCAAGACGGATGGACAAGGTTCATAGTGGAGAAGCCATTCGGCCGCGATTCCGAGTCGTCAGGGGAGCTCACTCGAAACTTGAAGAAGTACTTGGCCGAGGAGCAGATATTCAGGATTGACCATTATTTGGGGAAGGAGCTGGTTGAGAACCTCTCGGTGCTCCGTTTCTCCAATCTCGTCTTCGAGCCACTGTGGTCGAGGAACTACATCAGGAATGTGCAGCTCATATTTTCTGAAGATTTCGGCACGGAGGGTCGAGGCGGCCACTTCGACAACTACGGGATCATCAGGGACATAATGCAGAACCACCTGCTGCAGATCCTGGCCCTGTTCGCCATGGAGACTCCGGTCAGCCTCGACGCCGAGGACATCCGCAACGAGAAGGTGAAAGTGCTGAGGTCGATGAGGCAGCTGAGGCTGGAGGACGTGGTGGTGGGTCAGTACAAGGGGCACAGCAAGGGCGGGAAGACGTACCCGGCGTACGTGGACGACCCGACGGTGCCGAGCGGCAGCATCACGCCGACGTTCGCCGCCGCCGCCCTCTTCATCGACAACGCCCGCTGGGACGGCGTCCCCTTCCTCATGAAGGCCGGCAAGGCCCTGCACACGCGACGGGCGGAGATC--AGGGTGCAGTTCCGGCGGGTGCCGGGGAACCTGTACGGGCGGCGGAGCCG-GAGCGTGGGCGGCGGCGGGACGACAGCGACGAG-GGAGCTGGAGAA-GGCGACGAACGAGCTGGTGCTGCGGG-TGCAGCCCGACGA-GGCGAT-CTACCTCAAGATCAACAGCAAGGTGCCCGGGC-TGGGGATGAGGCTGGACAGCAGCGACCTCAACCTGCTCTACTCCGAGCGCTACCCCGC-CGAGATCCCCGACGCCTACGAGCGCCT-GCTGCTCGACGCCATCGAGGGCGAGCGCCGCCTCTTCATCCGCAGCGACGAGCTCGACGCCGCCTGGGCCATCTTCACCCCCGTCCTCGCCGACCTCGAGGCCAACAAGGTGGCACCCGAGCTCTACCCGTACGG-CAGCCGGGGACCCGTCGGAGCGCACTACCTCGCCGCCAACCACAACGTCCGCTGGGGTGACATTAGCTAGCTCAGAAAATGAAAAGATCGATCGGAGTCGCTGTTACCGTGCTTGCTATAATCTTCATTTACCATTTGCATTGATGAATTCT-TTATTGGACTGCTCAGGGACG-AAATTAATAAAACAAAGCTCTAGTCA----AAAAAAAGAAGG]

[+] EMBL CB683323             [CCCCTTGCAAGCCAAAATTCTGAATCTAAATCCAGCTGATTCCCATGGATTAATACTGATCCCAACAGTTCTTTGCCTTCTCCCTCCTTGCTCCAAATGGCCGGCACCGGCTTACCATTCCGGCAGGGCGCCATCTTCTTCTCAAGAGCTCATGCTGCTGCTCATCCAAGAACAAGGACTCCTCACCACCATTGCTCACCTCAGAGGACGCACGATGCGAGAGGAAGGTGCCACCTCACGGCTAAGTCCGCAAATGGACGCCCACAGATCAATGCCTCCTTCACAGATGTGGCGATAGATGGGGCACAGTCTGAAGATGGGGCGCCAAAGCAGGGAGGATCCACCGTCAACATCACCGTCGTCAGGGCCTCCGGCGATCTCGCCAAGAAGAAGATCTTTCCCGCGCTTTTCGCCCTGTACTACGAGGACTGCCTCCCGGAGCATTTTACAGTTTTTGGTTATGCTCGTATCAAGATGAGCGATGAAGAGCTCAGGAACATGATTAGCTTGACTCTGACATGCCGGATTGATCAGAGGGAGAACTGCAGTGACAAGATGGAACAGTTTCTGAAGAGATGCTTTTATCAATCTGGGCAGTACAATTCAGAGGAAGGGTTTTCTGAACTGGACAGAAAGCTAAAAGAAAAGGAGGCTGGCAAGGTACCAAACAGGCTCTTTTACCTGTCGATTCCACCGAACATATTTGTCGATGTGGTGAGATCTGCTAGTCGCACAGCATCATCTCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AK067510             [                                                                                                 TGGCCGGCACCGGCTTACGATTCCGGCAGGGCGCCATCTTCTTCTCAGGAGCTCATGCTGCTGCTCATCCAAGAACAAGGACTCCTCACCACCATTGCTCACCTCAGAGGACGCACGATGCGAGAGGAAGGTGCCGCCTCACGGCTAAGTCCGCAAATGGACGCCCACAGATCAGTGCCTCCTTCAGAGATGTGGCGATAGATGGGGCACAGTCTGAAGATGGGGCGCCAGAGCAGGGAGGATCCACCGTCAGCATCACCGTCGTCGGCGCCTCCGGCGATCTCGCCAAGAAGAAGATCTTTCCCGCGCTTTTCGCCCTGTACTACGAGGACTGCCTCCCGGAGCATTTTACAGTTTTTGGTTATGCTCGTAGCAAGATGAGCGATGAAGAGCTCAGGAACATGATTAGCTTGACTCTGACATGCCGGATTGATCAGAGGGAGAACTGCAGTGACAAGATGGAACAGTTTCTGAAGAGATGCTTTTATCAATCTGGGCAGTACAATTCAGAGGAAGGGTTTTCTGAACTGGACAGAAAGCTAAAAGAAAAGGAGGCTGGCAAGGTACCAAACAGGCTCTTTTACCTGTCGATTCCACCGAACATATTTGTCGATGTGGTGAGATCTGCTAGTCGCACAGCATCATCTCAAGACGGATGGACAAGGTTCATAGTGGAGAAGCCATTCGGCCGCGATTCCGAGTCGTCAGGGGAGCTCACTCGAAACTTGAAGAAGTACTTGGCCGAGGAGCAGATATTCAGGATTGACCATTATTTGGGGAAGGAGCTGGTTGAGAACCTCTCGGTGCTCCGTTTCTCCAATCTCGTCTTCGAGCCACTGTGGTCGAGGAACTACATCAGGAATGTGCAGCTCATATTTTCTGAAGATTTCGGCACGGAGGGTCGAGGCGGCCACTTCGACAACTACGGGATCATCAGGGACATAATGCAGAACCACCTGCTGCAGATCCTGGCCCTGTTCGCCATGGAGACTCCGGTCAGCCTCGACGCCGAGGACATCCGCAACGAGAAGGTGAAAGTGCTGAGGTCGATGAGGCAGCTGAGGCTGGAGGACGTGGTGGTGGGTCAGTACAAGGGGCACAGCAAGGGCGGGAAGACGTACCCGGCGTACGTGGACGACCCGACGGTGCCGAGCGGCAGCATCACGCCGACGTTCGCCGCCGCCGCCCTCTTCATCGACAACGCCCGCTGGGACGGCGTCCCCTTCCTCATGAAGGCCGGCAAGGCCCTGCACACGCGACGGGCGGAGATC  AGGGTGCAGTTCCGGCGGGTGCCGGGGAACCTGTACGGGCGGCGGAGCCG GAGCGTGGGCGGCGGCGGGACGACAGCGACGAG GGAGCTGGAGAA GGCGACGAACGAGCTGGTGCTGCGGG TGCAGCCCGACGA GGCGAT CTACCTCAAGATCAACAGCAAGGTGCCCGGGC TGGGGATGAGGCTGGACAGCAGCGACCTCAACCTGCTCTACTCCGAGCGCTACCCCGC CGAGATCCCCGACGCCTACGAGCGCCT GCTGCTCGACGCCATCGAGGGCGAGCGCCGCCTCTTCATCCGCAGCGACGAGCTCGACGCCGCCTGGGCCATCTTCACCCCCGTCCTCGCCGACCTCGAGGCCAACAAGGTGGCACCCGAGCTCTACCCGTACGG CAGCCGGGGACCCGTCGGAGCGCACTACCTCGCCGCCAACCACAACGTCCGCTGGGGTGACATTAGCTAGCTCAGAAAATGAAAAGATCGATCGGAGTCGCTGTTACCGTGCTTGCTATAATCTTCATTTACCATTTGCATTGATGAATTCT TTATTGGACTGCTCAGGGACG AAATTAATAAAACAAAGCT                       ]
[+] EMBL CB645660             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AGGGCGAACTGCAGTGACAAGATGGAACAGTTTCTGAAGAGATGCTTTTATCAATCTGGGCAGTACAATTCAGAGGAAGGGTTTTCTGAACTGGACAGAAAGCTAAAAGAAAAGGAGGCTGGCAAGGTACCAAACAGGCTCTTTTACCTGTCGATTCCACCGAACATATTTGTCGATGTGGTGAGATCTGCTAGTCGCACAGCATCATCTCAAGACGGATGGACAAGGTTCATAGTGGAGAAGCCATTCGGCCGCGATTCCGAGTCGTCAGGGGAGCTCACTCGAAACTTGAAGAAGTACTTGGCCGAGGAGCAGATATTCAGGATTGACCATTATTTGGGGAAGGAGCTGGTTGAGAACCTCTCGGTGCTCCGTTTCTCCAATCTCGTCTTCGAGCCACTGTGGTCGAGGAACTACATCAGGAATGTGCAGCTCATATTTTCTGAAGATTTCGGCACGGAGGGTCGAGGCGGCTACTTCGACAACTACGGGATCATCAGGGACATAATGCAGAACCACCTGCTGCAGATCCTGGCCCTGTTCGCCATGGAGACTCCGGTCAGCCTCGACGCCGAGGACATCCGCAACGAGAAGGTGAAAGTGCTGAGGTCGATGAGGCAGCTGAGGCTGGAGGACGTGGTGGTGGGTCAGTACAAGGGGCACAGCAAGGGCGGGAAGACGTACCCGGCGTACGTGGACGACCCGACGGTGCCGAGCGGCAGCATCACGCCGACGTTCGCCGCCGCCGCCCTCTTCATCGACAACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CB683773             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TGAGGCTGGAGGACGTGGTGGTGGGTCAGTACAAGGGGCACAGCAAGGGCGGGAAGACGTACCCGGCGTACGTGGACGACCCGACGGTGCCGAGCGGCAGCATCACGCCGACGTTCGCCGCCGCCGCCCTCTTCATCGACAACGCCCGCTGGGACGGCGTCCCCTTCCTCATGAAGGCCGGCAAGGCCCTGCACACGCGACGGGCGGAGATC  AGGGTGCAGTTCCGGCGGGTGCCGGGGAACCTGTACGGGCGGCGGAGCCG GAGCGTGGGCGGCGGCGGGACGACAGCGACGAG GGAGCTGGAGAA GGCGACGAACGAGCTGGTGCTGCGGG TGCAGCCCGACGA GGCGAT CTACCTCAAGATCAACAGCAAGGTGCCCGGGC TGGGGATGAGGCTGGACAGCAGCGACCTCAACCTGCTCTACTCCGAGCGCTACCCCGC CGAGATCCCCGACGCCTACGAGCGCCT GCTGCTCGACGCCATCGAGGGCGAGCGCCGCCTCTTCATCCGCAGCGACGAGCTCGACGCCGCCTGGGCCATCTTCACCCCCGTCCTCGCCGACCTCGAGGCCAACAAGGTGGCACCCGAGCTCTACCCGTACGG CAGCCGGGGACCCGTCGGAGCGCACTACCTCGCCGCCAACCACAACGTCCGCTGGGGTGACATTAGCTAGCTCAGAAAATGAAAAGATCGATCGGAGTCGCTGTTACCGTGCTTGCTATAATCTTCATTTACCATTTGCATTGATGAATTCT TTATTGGACTGCTCAGGGACG AAATTAATAAAACAAAGCTCTAGTCA    AAAAAAAGA   ]
[-] EMBL CB645661             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ATCACGCCGACGTTTGCCGCCGCCGCCCTCTTCATCGACAACGCCCGCTGGGACGGCGTCCCCTTCCTCATGAAGGCCGGCAAGGCCCTGCACACGCGACGGGCGGAGATC  AGGGTGCAGTTCCGGCGGGTGCCGGGGAACCTGTACGGGCGGCGGAGCCG GAGCGTGGGCGGCGGCGGGACGACAGCGACGAG GGAGCTGGAGAA GGCGACGAACGAGCTGGTGCTGCGGG TGCAGCCCGACGA GGCGAT CTACCTCAAGATCAACAGCAAGGTGCCCGGGC TGGGGATGAGGCTGGACAGCAGCGACCTCAACCTGCTCTACTCCGAGCGCTACCCCGC CGAGATCCCCGACGCCTACGAGCGCCT GCTGCTCGACGCCATCGAGGGCGAGCGCCGCCTCTTCATCCGCAGCGACGAGCTCGACGCCGCCTGGGCCATCTTCACCCCCGTCCTCGCCGGCCTCGAGGCCAACAAGGTGGCACCCGAGCTCTACCCGTACGG CAGCCGGGGACCCGTCGGAGCGCACTACCTCGCCGCCAACCACAACGTCCGCTGGGGTGACATTAGCTAGCTCAGAAAATGAAAAGATCGATCGGAGTCGCTGTTACCGTGCTTGCTATAATCTTCATTTACCATTTGCATTGATGAATTCT TTATTGGACTGCTCAGGGAGG GAATTAATAAAACAAAGCTCTAGTCATTCGAAAAAAAAAAGG]
[+] EMBL BQ907196             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ctGAGATCCAAGGGTCCAGTTCC GC GGTGCCGGGGAACCTGTAC GGC GCGGAGGCGTGAGCGTGGCCGGCGCAGGGACGACAGCGACGAGTGGAACTGGAGAATGGCGACGTACGATCTGGTGCTGCGGGTTGCAGCCCGACGATGGCGATNNTACCTCAAGATCAACAGCAAGGTGCCCGGGCTTGGGGATGAGGCTGGACAGCAGCGACCTCAACCTGCTCTACTCCGAGCGCTACCCCGCTCGAGATCCCCGACGCCTACGAGCGCCTNGCTGCTCGACGCCATCGAGGGCGAGCGCCGCCTCTTCATCCGCAGCGACGAGCTCGACGCCGCCTGGGCCATCTTCACCCCCGTCCTCGCCGACCTCGAGGCCAACAAGGTGGCACCCGAGCTCTACCCGTACGGCCAGCCGGGGACCCGTCGGAGCGCATTACCTCGCCGCCAACCACAACGTCCGCTGGGGTGACATTAGNTAGCTCAGAAAACGATAAGATCGATCGGAGTCGCTGTTACCGTGCTTGCTATAATCTTCATTTACCATTTGCATTGATGAATTCTGTTATTGGACTGCTCAGGGACGCAAATTAATAAAACTAAGCTCTAGTCAttc             ]




>consensus_9815#0
CCCCTTGCAAGCCAAAATTCTGAATCTAAATCCAGCTGATTCCCATGGATTAATACTGAT
CCCAACAGTTCTTTGCCTTCTCCCTCCTTGCTCCAAATGGCCGGCACCGGCTTACCATTC
CGGCAGGGCGCCATCTTCTTCTCAAGAGCTCATGCTGCTGCTCATCCAAGAACAAGGACT
CCTCACCACCATTGCTCACCTCAGAGGACGCACGATGCGAGAGGAAGGTGCCACCTCACG
GCTAAGTCCGCAAATGGACGCCCACAGATCAATGCCTCCTTCACAGATGTGGCGATAGAT
GGGGCACAGTCTGAAGATGGGGCGCCAAAGCAGGGAGGATCCACCGTCAACATCACCGTC
GTCAGGGCCTCCGGCGATCTCGCCAAGAAGAAGATCTTTCCCGCGCTTTTCGCCCTGTAC
TACGAGGACTGCCTCCCGGAGCATTTTACAGTTTTTGGTTATGCTCGTATCAAGATGAGC
GATGAAGAGCTCAGGAACATGATTAGCTTGACTCTGACATGCCGGATTGATCAGAGGGAG
AACTGCAGTGACAAGATGGAACAGTTTCTGAAGAGATGCTTTTATCAATCTGGGCAGTAC
AATTCAGAGGAAGGGTTTTCTGAACTGGACAGAAAGCTAAAAGAAAAGGAGGCTGGCAAG
GTACCAAACAGGCTCTTTTACCTGTCGATTCCACCGAACATATTTGTCGATGTGGTGAGA
TCTGCTAGTCGCACAGCATCATCTCAAGACGGATGGACAAGGTTCATAGTGGAGAAGCCA
TTCGGCCGCGATTCCGAGTCGTCAGGGGAGCTCACTCGAAACTTGAAGAAGTACTTGGCC
GAGGAGCAGATATTCAGGATTGACCATTATTTGGGGAAGGAGCTGGTTGAGAACCTCTCG
GTGCTCCGTTTCTCCAATCTCGTCTTCGAGCCACTGTGGTCGAGGAACTACATCAGGAAT
GTGCAGCTCATATTTTCTGAAGATTTCGGCACGGAGGGTCGAGGCGGCCACTTCGACAAC
TACGGGATCATCAGGGACATAATGCAGAACCACCTGCTGCAGATCCTGGCCCTGTTCGCC
ATGGAGACTCCGGTCAGCCTCGACGCCGAGGACATCCGCAACGAGAAGGTGAAAGTGCTG
AGGTCGATGAGGCAGCTGAGGCTGGAGGACGTGGTGGTGGGTCAGTACAAGGGGCACAGC
AAGGGCGGGAAGACGTACCCGGCGTACGTGGACGACCCGACGGTGCCGAGCGGCAGCATC
ACGCCGACGTTCGCCGCCGCCGCCCTCTTCATCGACAACGCCCGCTGGGACGGCGTCCCC
TTCCTCATGAAGGCCGGCAAGGCCCTGCACACGCGACGGGCGGAGATCAGGGTGCAGTTC
CGGCGGGTGCCGGGGAACCTGTACGGGCGGCGGAGCCGGAGCGTGGGCGGCGGCGGGACG
ACAGCGACGAGGGAGCTGGAGAAGGCGACGAACGAGCTGGTGCTGCGGGTGCAGCCCGAC
GAGGCGATCTACCTCAAGATCAACAGCAAGGTGCCCGGGCTGGGGATGAGGCTGGACAGC
AGCGACCTCAACCTGCTCTACTCCGAGCGCTACCCCGCCGAGATCCCCGACGCCTACGAG
CGCCTGCTGCTCGACGCCATCGAGGGCGAGCGCCGCCTCTTCATCCGCAGCGACGAGCTC
GACGCCGCCTGGGCCATCTTCACCCCCGTCCTCGCCGACCTCGAGGCCAACAAGGTGGCA
CCCGAGCTCTACCCGTACGGCAGCCGGGGACCCGTCGGAGCGCACTACCTCGCCGCCAAC
CACAACGTCCGCTGGGGTGACATTAGCTAGCTCAGAAAATGAAAAGATCGATCGGAGTCG
CTGTTACCGTGCTTGCTATAATCTTCATTTACCATTTGCATTGATGAATTCTTTATTGGA
CTGCTCAGGGACGAAATTAATAAAACAAAGCTCTAGTCAAAAAAAAGAAGG
clustalw multiple alignements is not computed in this case