cluster # 9826

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Oryza sativa
cluster # 9826 cluster # 9826 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9826#0 length = 1477 sequences # 6
consensusID : consensus_9826#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1477
fasta sequence
                              [AAAGCGCCAATAACTTGAGTTCCCGTGCAAGTGAAGCTTCAGGTGCTGTGACTGCTAGTTCAGTAATGGGTGTCACTACCACTCCAACTGCTCAGTTAGTTTCAAATAAAGGACCTCTGACAATTCAAGCAACCCATAATGAGAGGTCAGTTCCAGTTGCACGACATCCGCAGGTGCCTACGGTCTCCAAATCTGAAGCTCAGAAGCAGACTTCCCTGGTAAGCAGTGGTACAGCAACCCAGGCAATTACAGTATCGAGGCCCTTGAGTGCTCCACAAGTCCCTGCAGCAAAACAAACAGCACCTGTGGCTTCAGCAGTTC-AAAC-TGTACCACTTCTTT-CCCATTCGATGAGTGCAG-TTGGACGTCTAGGCAATGAACCCTCTGCTAGTGCTCCAAGCTACATTCCTCGTTCATACCGGAATGCCATGATGGAGAGAAGTTCTGTTGGTGCTAGCAGTTTCACTCATCAGACAAGCTCAGAGCAAAGAGTTGCACAGTCGCAATCGATGTTTTCATTGTCACCCTCCATTCTATCACCAGAGCACCTGATTGGGAATGACAGATCATCGTTGCGACAAGGGTTGACGTTTGGAACTGTCAAGCCTGAGACACTCAACCAGTGGAGAGAAGAGAGCTCTCAGCAGGCAAGCAGCAGCAGCAGTAGCAGCAGCAATGATCATGGGGCAGTAAGCTCAAGCAATGGAGGTGAGTTTGAGAAGTTTTATTTGTTTGGAAAGCCACGGAGCAAGCAACTGTCAGAAATTTCTGCCAGATCTACTCCATTTCAACCACAAGGCCTGGTCAGTGATGAGTTTCCGCACCTAGACATAATCAATGACTTGCTAAATGACGAACAGTGTGAAAGGCGAACATTAAAGGTTCTTCAGCGGAGCCAACAGGCATTTGCTCGACAATACTCGATGCCCAATAATTCCAGCACACCTGATTATGGCATGTTTGCTCAATCTGATCCATACCTGTTTGATCAACCTGAGCAATACTATGACGAGGAAATCCCAAGGTTCTATAATTCTTTGAACGGTACTTCTCGGGGGCTAAGGGAGAGGAGTTATTCGCA-TTTTGATCTGCCTTCATACTCCAACGGCCAGTTTGATGATATGATGATGAACCAGTGGCCATACGGCCAAACAGACCTCTCCTTGCCAAATTTTGGGGCAGATATGAATGGTTACCCATATCAGTCAAGTGATTATCCGAATTCCGCAAATGGGTTAAGCAGGTACCCACCCTATCGACCTGCCAATGGGCATTGAGCACCTCTAAT-GATT-AGTGATTGCAATTCACAATAAT-GTGTTGTAATCTCAT-GCTGTTTTCTTCTGAGC-TGAGTGTAATTGTAATCCTT-CCCTATAGTTTTA-TAAAGAAC-GGCTCCTCAGTTCCTTATTCAATAGCTATATTTCTTTGCTTTCTACATTGTTTTTTATCGCGTGGTAAAGAATCTAAAATCAGTCGTATACAT]

[+] EMBL C26064               [AAAGCGCCAATAACTTGAGTTCCCGTGCAAGTGAAGCTTCAGGTGCTGTGACTGCTAGTTCAGTAATGGGTGTCACTACCACTCCAACTGCTCAGTTAGTTTCAAATAAAGGACCTCTGACAATTCAAGCAACCCATAATGAGAGGTCAGTTCCAGTTGCACGACATCCGCAGGTGCCTACGGTCTCCAAATCTGAAGCTCAGAAGCAGACTTCCCTGGTAAGCAGTGGTACAGCAACCCAGGCAATTACAGTATCGAGGCCCTTGAGTGCTCCACAAGTCCCTGCAGCAAAACAAACAGCACCTGTGGCTTCAGCAGTTCAAAACTTGTACCACTTCTTTNCCCATTCGATGAGTGCAGTTTGGACGTCTAGGCAATGAACCCTNTGCTAGTGCTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CB642272             [                                                                                                                               AGCAACCCATAATGAGAGGTCAGTTCCAGTTGCACGACATCCGCAGGTGCCTACGGTCTCCAAATCTGAAGCTCAGAAGCAGACTTCCCTGGTAAGCAGTGGTACAGCAACCCAGGCAATTACAGTATCGAGGCCCTTGAGTGCTCCACAAGTCCCTGCAGCAAAACAAACAGCACCTGTGGCTTCAGCAGTTC AAAC TGTACCACTTCTTT CCCATTCGATGAGTGCAG TTGGACGTCTAGGCAATGAACCCTCTGCTAGTGCTCCAAGCTACATTCCTCGTTCATACCGGAATGCCATGATGGAGAGAAGTTCTGTTGGTGCTAGCAGTTTCACTCATCAGACAAGCTCAGAGCAAAGAGTTGCACAGTCGCAATCGATGTTTTCATTGTCACCCTCCATTCTATCACCAGAGCACCTGATTGGGAATGACAGATCATCGTTGCGACAAGGGTTGACGTTTGGAACTGTCAAGCCTGAGACACTCAACCAGTGGAGAGAAGAGAGCTCTCAGCAGGCAAGCAGCAGCAGCAGTAGCAGCAGCAATGATCATGGGGCAGTAAGCTCAAGCAATGGAGGTGAGTTTGAGAAGTTTTATTTGTTTGGAAAGCCACGGAGCAAGCAACTGTCAGAAATTTCTGCCAGATCTACTCCATTTCAACCACAAGGCCTGGTCAGTGATGAGTTTCCGCACCTAGACATAATCAATGACTTGCTAAATGACGAACAGTGTGAAAGGCGAACATTAAAGGTTCTTCAGCGGAGCCAACAGGCATTTGCTCGACAATACTCGATGCCCAATAATTCCAGCACACCTGATTATGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AK059486             [                                                                                                                                                                                                                                                                                                                                                                  GTGCAG TTGGACGTCTAGGCAATGAACCCTCTGCTAGTGCTCCAAGCTACATTCCTCGTTCATACCGGAATGCCATGATGGAGAGAAGTTCTGTTGGTGCTAGCAGTTTCACTCATCAGACAAGCTCAGAGCAAAGAGTTGCACAGTCGCAATCGATGTTTTCATTGTCACCCTCCATTCTATCACCAGAGCACCTGATTGGGAATGACAGATCATCGTTGCGACAAGGGTTGACGTTTGGAACTGTCAAGCCTGAGACACTCAACCAGTGGAGAGAAGAGAGCTCTCAGCAGGCAAGCAGCAGCAGCAGTAGCAGCAGCAATGATCATGGGGCAGTAAGCTCAAGCAATGGAGGTGAGTTTGAGAAGTTTTATTTGTTTGGAAAGCCACGGAGCAAGCAACTGTCAGAAATTTCTGCCAGATCTACTCCATTTCAACCACAAGGCCTGGTCAGTGATGAGTTTCCGCACCTAGACATAATCAATGACTTGCTAAATGACGAACAGTGTGAAAGGCGAACATTAAAGGTTCTTCAGCGGAGCCAACAGGCATTTGCTCGACAATACTCGATGCCCAATAATTCCAGCACACCTGATTATGGCATGTTTGCTCAATCTGATCCATACCTGTTTGATCAACCTGAGCAATACTATGACGAGGAAATCCCAAGGTTCTATAATTCTTTGAACGGTACTTCTCGGGGGCTAAGGGAGAGGAGTTATTCGCA TTTTGATCTGCCTTCATACTCCAACGGCCAGTTTGATGATATGATGATGAACCAGTGGCCATACGGCCAAACAGACCTCTCCTTGCCAAATTTTGGGGCAGATATGAATGGTTACCCATATCAGTCAAGTGATTATCCGAATTCCGCAAATGGGTTAAGCAGGTACCCACCCTATCGACCTGCCAATGGGCATTGAGCACCTCTAAT GATT AGTGATTGCAATTCACAATAAT GTGTTGTAATCTCAT GCTGTTTTCTTCTGAGC TGAGTGTAATTGTAATCCTT CCCTATAGTTTTA TAAAGAAC GGCTCCTCAG                                                                                   ]
[-] EMBL CA752893             [                                                                                                                                                                                                                                                                                                                                                                              CGTCTAGGCAATGAACCCTCTGCTAGTGCTCCAAGCTACATTCCTCGTTCATACCGGAATGCCATGATGGAGAGAAGTTCTGTTGGTGCTAGCAGTTTCACTCATCAGACAAGCTCAGAGCAAAGAGTTGCACAGTCGCAATCGATGTTTTCATTGTCACCCTCCATTCTATCACCAGAGCACCTGGCTGGGAATGACAGATCATCGTTGCGACAAGGGTTGACGTTTGGAACTGTCAAGCCTGAGACACTCAACCAGTGGAGAGAAGAGAGCTCTCAGCAGGCAAGCAGCAGCAGCAGTAGCAGCAGCAATGATCATGGGGCAGTAAGCTCAAGCAATGGAGGTGAGTTTGAGAAGTTTTATTTGTTTGGAAAGCCACGGAGCAAGCAACTGTCAGAAATTTCTGCCAGATCTACTCCATTTCAACCACAAGGCCTGGTCAGTGATGAGTTTCCGCACCTAGACATAATCAATGACTTGCTAAATGACGAACAGTGTGAAAGGCGAACATTAAAGGTTCTTCAGCGGAGCCAACAGGCATTTGCTCGACAATACTCGATGCCCAATAATTCCAGCACACCTGATTATGGCATGTTTGCTCAATCTGATCCATACCTGTTTGATCAACCTGAGCAATACTATGACGAGGAAATCCCAAGGTTCTATAATTCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CA765576             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GAGCTCTCAGCAGGCAAGCAGCAGCAGCAGTAGCAGCAGCAATGATCATGGGGCAGTAAGCTCAAGCAATGGAGGTGAGTTTGAGAAGTTTTATTTGTTTGGAAAGCCACGGAGCAAGCAACTGTCAGAAATTTCTGCCAGATCTACTCCA TTCAACCACAAGGCCTGGTCAGTGATGAGTTTCCGCACCTAGACATAATCAATGACTTGCTAAATGACGAACAGTGTGAAAGGCGAACATTAAAGGTTCTTCAGCGGAGCCAACAGGCATTTGCTCGACAATACTCGATGCCCAATAATTCCAGCACACCTGATTATGGCATGTTTGCTCAATCTGATCCATACCTGTTTGATCAACCTGAGCAATACTATGACGAGGAAATCCCAAGGTTCTATAATTCTTTGAACGGTACTTCTCGGGGGCTAAGGGAGAGGAGTTATTCGCATTTTTGATCTGCCTTCATACTCCAACGGCCAGTTTGATGATATGATGATGAACCAGTGGCCATACGGCCAAACAGACCTCTCCTTGCCAAATTTTGGGGCAGATATGAATGGTTACCCATATCAGTCAAGTGATTATCCGAATTCCGCAAATGGGTTAAGCAGGTACCCACCCTATCGACCTGCCAATGGGCATTGAGCACCTCTNATGGATTAAGTGATTGCAATT ACAATAATGGGGNTGNAATCTCATGGCTGGTTTCTTCTGNGCTTGAGNGNAATTGGAATCCTTNCCTTATAGNTTTATTAAANAACNGGTTCCTCAGTTCCT                                                                              ]
[-] EMBL CB642273             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AGTAGCAGCAGCAATGATCATGGGGCAGTAAGCTCAAGCAATGGAGGTGAGTTTGAGAAGTTTTATTTGTTTGGAAAGCCACGGAGCAAGCAACTGTCAGAAATTTCTGCCAGATCTACTCCATTTCAACCACAAGGCCTGGTCAGTGATGAGTTTCCGCACCTAGACATAATCAATGACTTGCTAAATGACGAACAGTGTGAAAGGCGAACATTAAAGGTTCTTCAGCGGAGCCAACAGGCATTTGCTCGACAATACTCGATGCCCAATAATTCCAGCACACCTGATTATGGCATGTTTGCTCAATCTGATCCATACCTGTTTGATCAACCTGAGCAATACTATGACGAGGAAATCCCAAGGTTCTATAATTCTTTGAACGGTACTTCTCGGGGGCTAAGGGAGAGGAGTTATTCGCA TTTTGATCTGCCTTCATACTCCAACGGCCAGTTTGATGATATGATGATGAACCAGTGGCCATACGGCCAAACAGACCTCTCCTTGCCAAATTTTGGGGCAGATATGAATGGTTACCCATATCAGTCAAGTGATTATCCGAATTCCGCAAATGGGTTAAGCAGGTACCCACCCTATCGACCTGCCAATGGGCATTGAGCACCTCTAAT GATT AGTGATTGCAATTCACAATAAT GTGTTGTAATCTCAT GCTGTTTTCTTCTGAGC TGAGTGTAATTGTAATCCTT CCCTATAGTTTTA TAAAGAAC GGCTCCTCAGTTCCTTATTCAATAGCTATATTTCTTTGCTTTCTACATTGTTTTTTATCGCGTGGTAAAGAATCTAAAATCAGTCGTATACAT]




>consensus_9826#0
AAAGCGCCAATAACTTGAGTTCCCGTGCAAGTGAAGCTTCAGGTGCTGTGACTGCTAGTT
CAGTAATGGGTGTCACTACCACTCCAACTGCTCAGTTAGTTTCAAATAAAGGACCTCTGA
CAATTCAAGCAACCCATAATGAGAGGTCAGTTCCAGTTGCACGACATCCGCAGGTGCCTA
CGGTCTCCAAATCTGAAGCTCAGAAGCAGACTTCCCTGGTAAGCAGTGGTACAGCAACCC
AGGCAATTACAGTATCGAGGCCCTTGAGTGCTCCACAAGTCCCTGCAGCAAAACAAACAG
CACCTGTGGCTTCAGCAGTTCAAACTGTACCACTTCTTTCCCATTCGATGAGTGCAGTTG
GACGTCTAGGCAATGAACCCTCTGCTAGTGCTCCAAGCTACATTCCTCGTTCATACCGGA
ATGCCATGATGGAGAGAAGTTCTGTTGGTGCTAGCAGTTTCACTCATCAGACAAGCTCAG
AGCAAAGAGTTGCACAGTCGCAATCGATGTTTTCATTGTCACCCTCCATTCTATCACCAG
AGCACCTGATTGGGAATGACAGATCATCGTTGCGACAAGGGTTGACGTTTGGAACTGTCA
AGCCTGAGACACTCAACCAGTGGAGAGAAGAGAGCTCTCAGCAGGCAAGCAGCAGCAGCA
GTAGCAGCAGCAATGATCATGGGGCAGTAAGCTCAAGCAATGGAGGTGAGTTTGAGAAGT
TTTATTTGTTTGGAAAGCCACGGAGCAAGCAACTGTCAGAAATTTCTGCCAGATCTACTC
CATTTCAACCACAAGGCCTGGTCAGTGATGAGTTTCCGCACCTAGACATAATCAATGACT
TGCTAAATGACGAACAGTGTGAAAGGCGAACATTAAAGGTTCTTCAGCGGAGCCAACAGG
CATTTGCTCGACAATACTCGATGCCCAATAATTCCAGCACACCTGATTATGGCATGTTTG
CTCAATCTGATCCATACCTGTTTGATCAACCTGAGCAATACTATGACGAGGAAATCCCAA
GGTTCTATAATTCTTTGAACGGTACTTCTCGGGGGCTAAGGGAGAGGAGTTATTCGCATT
TTGATCTGCCTTCATACTCCAACGGCCAGTTTGATGATATGATGATGAACCAGTGGCCAT
ACGGCCAAACAGACCTCTCCTTGCCAAATTTTGGGGCAGATATGAATGGTTACCCATATC
AGTCAAGTGATTATCCGAATTCCGCAAATGGGTTAAGCAGGTACCCACCCTATCGACCTG
CCAATGGGCATTGAGCACCTCTAATGATTAGTGATTGCAATTCACAATAATGTGTTGTAA
TCTCATGCTGTTTTCTTCTGAGCTGAGTGTAATTGTAATCCTTCCCTATAGTTTTATAAA
GAACGGCTCCTCAGTTCCTTATTCAATAGCTATATTTCTTTGCTTTCTACATTGTTTTTT
ATCGCGTGGTAAAGAATCTAAAATCAGTCGTATACAT
clustalw multiple alignements is not computed in this case