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Oryza sativa
cluster # 9837 cluster # 9837       Sequences # 7       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9837#0 length = 2427 sequences # 6  
 consensus_9837#1 length = 676 sequences # 1  
consensusID : consensus_9837#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 2427
fasta sequence 
                              [GCGAGAGCGCCAAACAAATCGAACGCCCATTTCCCCAACGCCTCGCGCCACCCGCGCCGATCCGTTCGCCTCCGCCGCCGCCGCGGCCGCCTCGCGGGCTCCCCGGCGACCCCCCCGCTCGTTCCCGTGCCGTGCCGTGCCGTGTCGGCGTGTGCCCCCGCCCTGCCTGACCTGTCGTCGGTTGGATCGGAGGTCCAATGCCTCTTTTCAAGAGGAAACCTTTCTCCTTACTTGAGCCCCCCAAGGACTTGGATTCTAAGGAGAAGGTTTTCCAAATTCGGTTCACAAGGGAGATATTCCGAGATTACCAAGACTACATAAACAGGTTGAATCTTTATCGGCAAAGGGTTTGGTCATGTAAGATATCCGGAAAATCAAACTTGACTTTTGAAGAAGCTTTGGTCTCCGAGCATCATGCAGTGTCAAAGGCTCAGAAATTACCCACAGAACTGATGGCTCCTGTTCTTCGGATGATTCAATACAGCACTCTTGGATTATATGAGCTTGTTGAGAAGATATATGCTAGCCTGCAGGAAGCTGTATTTGAAGGATTAGAATTATATGCTAAACAGGATGGTTTAGAGGCTGCTTGCAG-GATTTTGAAGATTTTAGGGTCTGATGGCACCAAGATGTATGAAGTTGGTTGGCTTCTTAGGGACAAGACTATCATCAGTACGTCAGTGATCAAAGGTGAAGACTTGATTCACCGGAGGCCACCTGTTAGTAGGAATACGCTGAAGATTTTTATTAGAGATGCAACTTCTCAAAATGCCCCATGGGTTATACATGAAAATCTTGCCAAAAGATATGGCATACCCATTGAGCCCCCGAATGACATGATGTTTGGTGAAGGTTTGCAAAAGAAAGGGAGGAAAAGACGTGAGGATGGACCTATGGGAGATCCCAAAAAAAAGATGAAGAACGATGAGGAACACATAAATGTTCCAATTAAGTACCCAATAGATGATCTCTTAGTACAACCTTCTGCAGATGATCATGCTTTATTGAAGAGACCTCCTCTGGCTACAGATTTTAGAGTACCAAAATATTCTGTGGGCGATCTCCTTATGGTATGGGACTTCTGCTTGTCCTTCGGGAGGGTTCTGAATCTATCCCCATTTTCACTGGTAGATTTGGAGAATGCAATTTGCCACAAAGAAAGCAATGCACTTCTTGTGGAAATACATACAGCTATATTCCACTTGCTTATTAAGGATGAAGGTGACTATTTCACTATTCTGCGGACCAAGAAACGGAAGCTAAAGGTGACTTTAGTAACATGGGCTGAATATCTCTGTGATTTCTTGGAAATGACAAAAACTGAAGAACTCACCAGAAACATTGCAACAGTAAGAAAGGGTTATTATAGTCTTATTGATACTGATATCAAACTTAAGATTCTCCGGGAACTAGTAGAAGAAGCTATTACAACTTCTCCTGTAAGAGAGAAACTAAGTGAACGGGTGGACCAGCGGCAAGCGCTCGCTGCGACTAAAAGAGAGAGTACTAGAAAGGCAAAGGATGAGCAGAACTCAAGCATTGATGGATTGCAAGATGACAATGAGAGTGTTGATGAGCAGGGTAAGGGGAAAGAAGAAAAGGATAAGAACAATATCTCTCGAAGCAAGACAGAAGGGAAACGCCATGGGGTACAGCACCTCGAAACAGAGATTGAAAAATTATCCATCCGTTCCAGCCCCCTTGGAAAAGACAGACACTATAACAGGTATTGGTTTTTCAGGCGTGAAGGAAGGCTTTTTGTTGAAAGTGCAGATTCAAAAGAATGGGGATACTACAGCACTAAGGAAGAGCTCGATGTGTTAATGAGCTCACTGAACGTAAAAGGTTTAAGGGAGAGAGCTCTCAAACGGCAGCTGGACAAGTTGTACAGTAAGATAAGTAATGCTCTGGAGAAACGATCAAAAGAAATCACACACAAATTGTTGCTTGAAGAGGCTGTATTGCGCCGTTCCACACGTGTCCGGGCTCAACCAAGGGATAACCCATCCATGTCATTCCTGAAGTATGTCAACAAATGGAAGGATAACTAAGTAGCCAAGAGGACAGCTTGTCCGCAGGTGGGGGAACTGAGCTAGCTACTCGATGACAGGGTTTTGTTTTCAGAGGAACATATATGAAGGTCTGATGAGGTGGTATGTTATTTGTTAGCCAATCCTCATGGCTGTTCTTTGAGCAATCATCACTAGGTAGCAAAACCAATTAACCTGTTGGTTTACAGCCTTACACTGGACTGATAGAGCGCTACCAGAGCTAGTTTTTGGAGCTATATACCCAGTGTAACTTATCTTACATGTAAACATGGTATTAGCCTCAGGAACCATGAGTTGCTAAACTGATATGCTGCTGATGTTATGCCGGTTTTGGATTTATCAGTCGCAGGGGATACATTTCTCTATCATTATATTG]

[+] EMBL AK063555             [GCGAGAGCGCCAAACAAATCGAACGCCCATTTCCCCAACGCCTCGCGCCACCCGCGCCGATCCGTTCGCCTCCGCCGCCGCCGCGGCCGCCTCGCGGGCTCCCCGGCGACCCCCCCGCTCGTTCCCGTGCCGTGCCGTGCCGTGTCGGCGTGTGCCCCCGCCCTGCCTGACCTGTCGTCGGTTGGATCGGAGGTCCAATGCCTCTTTTCAAGAGGAAACCTTTCTCCTTACTTGAGCCCCCCAAGGACTTGGATTCTAAGGAGAAGGTTTTCCAAATTCGGTTCACAAGGGAGATATTCCGAGATTACCAAGACTACATAAACAGGTTGAATCTTTATCGGCAAAGGGTTTGGTCATGTAAGATATCCGGAAAATCAAACTTGACTTTTGAAGAAGCTTTGGTCTCCGAGCATCATGCAGTGTCAAAGGCTCAGAAATTACCCACAGAACTGATGGCTCCTGTTCTTCGGATGATTCAATACAGCACTCTTGGATTATATGAGCTTGTTGAGAAGATATATGCTAGCCTGCAGGAAGCTGTATTTGAAGGATTAGAATTATATGCTAAACAGGATGGTTTAGAGGCTGCTTGCAG GATTTTGAAGATTTTAGGGTCTGATGGCACCAAGATGTATGAAGTTGGTTGGCTTCTTAGGGACAAGACTATCATCAGTACGTCAGTGATCAAAGGTGAAGACTTGATTCACCGGAGGCCACCTGTTAGTAGGAATACGCTGAAGATTTTTATTAGAGATGCAACTTCTCAAAATGCCCCATGGGTTATACATGAAAATCTTGCCAAAAGATATGGCATACCCATTGAGCCCCCGAATGACATGATGTTTGGTGAAGGTTTGCAAAAGAAAGGGAGGAAAAGACGTGAGGATGGACCTATGGGAGATCCCAAAAAAAAGATGAAGAACGATGAGGAACACATAAATGTTCCAATTAAGTACCCAATAGATGATCTCTTAGTACAACCTTCTGCAGATGATCATGCTTTATTGAAGAGACCTCCTCTGGCTACAGATTTTAGAGTACCAAAATATTCTGTGGGCGATCTCCTTATGGTATGGGACTTCTGCTTGTCCTTCGGGAGGGTTCTGAATCTATCCCCATTTTCACTGGTAGATTTGGAGAATGCAATTTGCCACAAAGAAAGCAATGCACTTCTTGTGGAAATACATACAGCTATATTCCACTTGCTTATTAAGGATGAAGGTGACTATTTCACTATTCTGCGGACCAAGAAACGGAAGCTAAAGGTGACTTTAGTAACATGGGCTGAATATCTCTGTGATTTCTTGGAAATGACAAAAACTGAAGAACTCACCAGAAACATTGCAACAGTAAGAAAGGGTTATTATAGTCTTATTGATACTGATATCAAACTTAAGATTCTCCGGGAACTAGTAGAAGAAGCTATTACAACTTCTCCTGTAAGAGAGAAACTAAGTGAACGGGTGGACCAGCGGCAAGCGCTCGCTGCGACTAAAAGAGAGAGTACTAGAAAGGCAAAGGATGAGCAGAACTCAAGCATTGATGGATTGCAAGATGACAATGAGAGTGTTGATGAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AK067393             [                     AACGCCCATTTCCCCAACGCCTCGCGCCACCCGCGCCGATCCGTTCGCCTCCGCCGCCGCCGCGGCCGCCTCGCGGGCTCCCCGGCGACCCCCCCGCTCGTTCCCGTGCCGTGCCGTGCCGTGTCGGCGTGTGCCCCCGCCCTGCCTGACCTGTCGTCGGTTGGATCGGAGGTCCAATGCCTCTTTTCAAGAGGAAACCTTTCTCCTTACTTGAGCCCCCCAAGGACTTGGATTCTAAGGAGAAGGTTTTCCAAATTCGGTTCACAAGGGAGATATTCCGAGATTACCAAGACTACATAAACAGGTTGAATCTTTATCGGCAAAGGGTTTGGTCATGTAAGATATCCGGAAAATCAAACTTGACTTTTGAAGAAGCTTTGGTCTCCGAGCATCATGCAGTGTCAAAGGCTCAGAAATTACCCACAGAACTGATGGCTCCTGTTCTTCGGATGATTCAATACAGCACTCTTGGATTATATGAGCTTGTTGAGAAGATATATGCTAGCCTGCAGGAAGCTGTATTTGAAGGATTAGAATTATATGCTAAACAGGATGGTTTAGAGGCTGCTTGCAG GATTTTGAAGATTTTAGGGTCTGATGGCACCAAGATGTATGAAGTTGGTTGGCTTCTTAGGGACAAGACTATCATCAGTACGTCAGTGATCAAAGGTGAAGACTTGATTCACCGGAGGCCACCTGTTAGTAGGAATACGCTGAAGATTTTTATTAGAGATGCAACTTCTCAAAATGCCCCATGGGTTATACATGAAAATCTTGCCAAAAGATATGGCATACCCATTGAGCCCCCGAATGACATGATGTTTGGTGAAGGTTTGCAAAAGAAAGGGAGGAAAAGACGTGAGGATGGACCTATGGGAGATCCCAAAAAAAAGATGAAGAACGATGAGGAACACATAAATGTTCCAATTAAGTACCCAATAGATGATCTCTTAGTACAACCTTCTGCAGATGATCATGCTTTATTGAAGAGACCTCCTCTGGCTACAGATTTTAGAGTACCAAAATATTCTGTGGGCGATCTCCTTATGGTATGGGACTTCTGCTTGTCCTTCGGGAGGGTTCTGAATCTATCCCCATTTTCACTGGTAGATTTGGAGAATGCAATTTGCCACAAAGAAAGCAATGCACTTCTTGTGGAAATACATACAGCTATATTCCACTTGCTTATTAAGGATGAAGGTGACTATTTCACTATTCTGCGGACCAAGAAACGGAAGCTAAAGGTGACTTTAGTAACATGGGCTGAATATCTCTGTGATTTCTTGGAAATGACAAAAACTGAAGAACTCACCAGAAACATTGCAACAGTAAGAAAGGGTTATTATAGTCTTATTGATACTGATATCAAACTTAAGATTCTCCGGGAACTAGTAGAAGAAGCTATTACAACTTCTCCTGTAAGAGAGAAACTAAGTGAACGGGTGGACCAGCGGCAAGCGCTCGCTGCGACTAAAAGAGAGAGTACTAGAAAGGCAAAGGATGAGCAGAACTCAAGCATTGATGGATTGCAAGATGACAATGAGAGTGTTGATGAGCAGGGTAAGGGGAAAGAAGAAAAGGATAAGAACAATATCTCTCGAAGCAAGACAGAAGGGAAACGCCATGGGGTACAGCACCTCGAAACAGAGATTGAAAAATTATCCATCCGTTCCAGCCCCCTTGGAAAAGACAGACACTATAACAGGTATTGGTTTTTCAGGCGTGAAGGAAGGCTTTTTGTTGAAAGTGCAGATTCAAAAGAATGGGGATACTACAGCACTAAGGAAGAGCTCGATGTGTTAATGAGCTCACTGAACGTAAAAGGTTTAAGGGAGAGAGCTCTCAAACGGCAGCTGGACAAGTTGTACAGTAAGATAAGTAATGCTCTGGAGAAACGATCAAAAGAAATCACACACAAATTGTTGCTTGAAGAGGCTGTATTGCGCCGTTCCACACGTGTCCGGGCTCAACCAAGGGATAACCCATCCATGTCATTCCTGAAGTATGTCAACAAATGGAAGGATAACTAAGTAGCCAAGAGGACAGCTTGTCCGCAGGTGGGGGAACTGAGCTAGCTACTCGATGACAGGGTTTTGTTTTCAGAGGAACATATATGAAGGTCTGATGAGGTGGTATGTTATTTGTTAGCCAATCCTCATGGCTGTTCTTTGAGCAATCATCACTAGGTAGCAAAACCAATTAACCTGTTGGTTTACAGCCTTACACTGGACTGATAGAGCGCTACCAGAGCTAGTTTTTGGAGCTATATACCCAGTGTAACTTATCTTACATGTAAACATGGTATTAGCCTCAGGAACCATGAGTTGCTAAACTGATATGCTGCTGATGTTATGCCGGTTTTGGATTTATCAGTCGCAGGGGATACATTTCTCTATCATTATATTG]
[+] EMBL CF196633             [                                                                                                                                                                                                                                                                                                                                                                                                                                                   AATTACCCACAGAACTGATGGCTCCTGTTCTTCGGATGATTCAATACAGCACTCTTGGATTATATGAGCTTGTTGAGAAGATATATGCTAGCCTGCAGGAAGCTGTATTTGAAGGATTAGAATTATATGCTAAACAGGATGGTTTAGAGGCTGCTTGCAG GATTTTGAAGATTTTAGGGTCTGATGGCACCAAGATGTATGAAGTTGGTTGGCTTCTTAGGGACAAGACTATCATCAGTACGTCAGTGATCAAAGGTGAAGACTTGATTCACCGGAGGCCACCTGTTAGTAGGAATACGCTGAAGATTTTTATTAGAGATGCAACTTCTCAAAATGCCCCATGGGTTATACATGAAAATCTTGCCAAAAGATATGGCATACCCATTGAGCCCCCGAATGACATGATGTTTGGTGAAGGTTTGCAAAAGAAAGGGANNNNNNGACGTGAGGATGGACCTATGGGNNNTNCCNNNAAAAAGATnnnn                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CF304295             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ATGGCTCCTGTTCTTCGGATGATTCAATACAGCACTCTTGGATTATATGAGCTTGTTGAGAAGATATATGCTAGCCTGCAGGAAGCTGTATTTGAAGGATTAGAATTATATGCTAAACAGGATGGTTTAGAGGCTGCTTGTTT GATTTTGAAGATTTTAGGGTCTGATGGCACCAAGATGTATGAAGTTGGTTGGCTTCTTAGGGACAAGACTATCATCAGTACGTCAGTGATCAAAGGTGAAGACTTGATTCACCGGAGGCCACCTGTTAGTAGGAATACGCTGAAGATTTTTATTAGAGATGCAACTTCTCAAAATGCCCCATGGGTTATACATGAAAATCTTGCCAAAAGATATGGCATACCCATTGAGCCCCCGAATGACATGATGTTTGGTGAAGGTTTGCAAAAGAAAGGGAGGAAAAGACGTGAGGATGGACCTATGGGAGATCCCAAAAAAAAGATGAAGAACGATGAGGAACACATAAATGTTCCAATTAAGTACCCAATAGATGATCTCTTAGTACAACCTTCTGCAGATGATCATGCTTTATTGAAGAGACCTCCTCTGGCTACAGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CF304425             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ATGGCTCCTGTTCTTCGGATGATTCAATACAGCACTCTTGGATTATATGAGCTTGTTGAGAAGATATATGCTAGCCTGCAGGAAGCTGTATTTGAAGGATTAGAATTATATGCTAAACAGGATGGTTTAGAGGCTGCTTGCTGTGATTTTGAAGATTTTAGGGTCTGATGGCACCAAGATGTATGAAGTTGGTTGGCTTCTTAGGGACAAGACTATCATCAGTACGTCAGTGATCAAAGGTGAAGACTTGATTCACCGGAGGCCACCTGTTAGTAGGAATACGCTGAAGATTTTTATTAGAGATGCAACTTCTCAAAATGCCCCATGGGTTATACATGAAAATCTTGCCAAAAGATATGGCATACCCATTGAGCCCCCGAATGACATGATGTTTGGTGAAGGTTTGCAAAAGAAAGGGAGGAAAAGACGTGAGGATGGACCTATGGGAGATCCCAAAAAAAAGATGAAGAACGATGAGGAACACATAAATGTTCCAATTAAGTACCCAATAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CA766784             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AAAGGATAAGAACAATATCTCTCGAAGCAAGACAGAAGGGAAACGCCATGGGGTACAGCACCTCGAAACAGAGATTGAAAAATTATCCATCCGTTCCAGCCCCCTTGGAAAAGACAGACACTATAACAGGTATTGGTTTTTCAGGCGTGAAGGAAGGCTTTTTGTTGAAAGTGCAGATACAAAAGAATGGGGATACTACAGCACTAAGGAAGAGCTCGATGTGTTAATGAGCTCACTGAACGTAAAAGGTATAAGGGAGAGAGCTCTCAAACGGCAGCTGGACAAGTTGTACAGTAAGATAAGTAATGCTCTGGAGAAACGATCAAAAGAAATCACACACAAATTGTTGCTTGAAGAGGCTGTATTGCGCCGTTCCACACGTGTCCGGGCTCAACCAAGGGATAACCCATCCATGTCATTCCTGAAGTATGTCAACAAATGGAAGGATAACTAAGTAGCCAAGAGGACAGCTTGTCCGCAGGTGGGGGAACTGAGCTAGCTACTCGATGACAGGGTTTTGTTTTCAGAGGAACATATATGAAGGTCTGATGAGGTGGTATGTTATTTGTTAGCCAATCCTCATGGCTGTTCTTTGAGCAATCATCACTAGGTAGCAAAACCGATTAACCTGTTGGTTTACAGNCTTACACTGGACTGATAGAGCGCTACCAGAGCTAGTTTTTGGAGCTATATACCCAGTGTAACTTATCTTACATGTAAACATGGTATTAGCCTCANGAACCATGAGTTGCTNAACTGATATGCTGCT                                                             ]




>consensus_9837#0
GCGAGAGCGCCAAACAAATCGAACGCCCATTTCCCCAACGCCTCGCGCCACCCGCGCCGA
TCCGTTCGCCTCCGCCGCCGCCGCGGCCGCCTCGCGGGCTCCCCGGCGACCCCCCCGCTC
GTTCCCGTGCCGTGCCGTGCCGTGTCGGCGTGTGCCCCCGCCCTGCCTGACCTGTCGTCG
GTTGGATCGGAGGTCCAATGCCTCTTTTCAAGAGGAAACCTTTCTCCTTACTTGAGCCCC
CCAAGGACTTGGATTCTAAGGAGAAGGTTTTCCAAATTCGGTTCACAAGGGAGATATTCC
GAGATTACCAAGACTACATAAACAGGTTGAATCTTTATCGGCAAAGGGTTTGGTCATGTA
AGATATCCGGAAAATCAAACTTGACTTTTGAAGAAGCTTTGGTCTCCGAGCATCATGCAG
TGTCAAAGGCTCAGAAATTACCCACAGAACTGATGGCTCCTGTTCTTCGGATGATTCAAT
ACAGCACTCTTGGATTATATGAGCTTGTTGAGAAGATATATGCTAGCCTGCAGGAAGCTG
TATTTGAAGGATTAGAATTATATGCTAAACAGGATGGTTTAGAGGCTGCTTGCAGGATTT
TGAAGATTTTAGGGTCTGATGGCACCAAGATGTATGAAGTTGGTTGGCTTCTTAGGGACA
AGACTATCATCAGTACGTCAGTGATCAAAGGTGAAGACTTGATTCACCGGAGGCCACCTG
TTAGTAGGAATACGCTGAAGATTTTTATTAGAGATGCAACTTCTCAAAATGCCCCATGGG
TTATACATGAAAATCTTGCCAAAAGATATGGCATACCCATTGAGCCCCCGAATGACATGA
TGTTTGGTGAAGGTTTGCAAAAGAAAGGGAGGAAAAGACGTGAGGATGGACCTATGGGAG
ATCCCAAAAAAAAGATGAAGAACGATGAGGAACACATAAATGTTCCAATTAAGTACCCAA
TAGATGATCTCTTAGTACAACCTTCTGCAGATGATCATGCTTTATTGAAGAGACCTCCTC
TGGCTACAGATTTTAGAGTACCAAAATATTCTGTGGGCGATCTCCTTATGGTATGGGACT
TCTGCTTGTCCTTCGGGAGGGTTCTGAATCTATCCCCATTTTCACTGGTAGATTTGGAGA
ATGCAATTTGCCACAAAGAAAGCAATGCACTTCTTGTGGAAATACATACAGCTATATTCC
ACTTGCTTATTAAGGATGAAGGTGACTATTTCACTATTCTGCGGACCAAGAAACGGAAGC
TAAAGGTGACTTTAGTAACATGGGCTGAATATCTCTGTGATTTCTTGGAAATGACAAAAA
CTGAAGAACTCACCAGAAACATTGCAACAGTAAGAAAGGGTTATTATAGTCTTATTGATA
CTGATATCAAACTTAAGATTCTCCGGGAACTAGTAGAAGAAGCTATTACAACTTCTCCTG
TAAGAGAGAAACTAAGTGAACGGGTGGACCAGCGGCAAGCGCTCGCTGCGACTAAAAGAG
AGAGTACTAGAAAGGCAAAGGATGAGCAGAACTCAAGCATTGATGGATTGCAAGATGACA
ATGAGAGTGTTGATGAGCAGGGTAAGGGGAAAGAAGAAAAGGATAAGAACAATATCTCTC
GAAGCAAGACAGAAGGGAAACGCCATGGGGTACAGCACCTCGAAACAGAGATTGAAAAAT
TATCCATCCGTTCCAGCCCCCTTGGAAAAGACAGACACTATAACAGGTATTGGTTTTTCA
GGCGTGAAGGAAGGCTTTTTGTTGAAAGTGCAGATTCAAAAGAATGGGGATACTACAGCA
CTAAGGAAGAGCTCGATGTGTTAATGAGCTCACTGAACGTAAAAGGTTTAAGGGAGAGAG
CTCTCAAACGGCAGCTGGACAAGTTGTACAGTAAGATAAGTAATGCTCTGGAGAAACGAT
CAAAAGAAATCACACACAAATTGTTGCTTGAAGAGGCTGTATTGCGCCGTTCCACACGTG
TCCGGGCTCAACCAAGGGATAACCCATCCATGTCATTCCTGAAGTATGTCAACAAATGGA
AGGATAACTAAGTAGCCAAGAGGACAGCTTGTCCGCAGGTGGGGGAACTGAGCTAGCTAC
TCGATGACAGGGTTTTGTTTTCAGAGGAACATATATGAAGGTCTGATGAGGTGGTATGTT
ATTTGTTAGCCAATCCTCATGGCTGTTCTTTGAGCAATCATCACTAGGTAGCAAAACCAA
TTAACCTGTTGGTTTACAGCCTTACACTGGACTGATAGAGCGCTACCAGAGCTAGTTTTT
GGAGCTATATACCCAGTGTAACTTATCTTACATGTAAACATGGTATTAGCCTCAGGAACC
ATGAGTTGCTAAACTGATATGCTGCTGATGTTATGCCGGTTTTGGATTTATCAGTCGCAG
GGGATACATTTCTCTATCATTATATTG

consensusID : consensus_9837#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 676
fasta sequence 
                              [TTCAGCCCAGAGCGGCAAGGCAAAAGGGGTTGAAAGGTGCAGATCACAAAAAATGGGGGATTTTTCAGCACTAAGGAAGAGCTCCCTTGTGTTAATAAGCTCCCTGACCGTAAAAGGTATAAGGGAGAGAGCTCTCAAACGGCAGCTGGACAAGTTGTACAGTAAGATAAGTAATGCTTCTGGAGAACCGATCAAAAGAAATCCCCCCCAAATTGTTGCTTGAAGAGGCTGTATTGCGCCGTTCCCCACGTGTCCGGGCTCAACCAAGGGATAACCCATCCATGTCATTCCTGAAGTATGTCAACAAATGGAAGGATAACTAAGTAGCCAAGAGGACAGCTTGTCCGCAGGTGGGGGAACTGAGCTAGCTACTCGATGACAGGGTTTTGTTTTCAGAGGAACATATATGAAGGTCTGATGAGGTGGTATGTTATTTGTTAGCCAATCCTCATGGCTGTTCTTTGAGCAATCATCACTAGGTAGCAAAACCGATTAACCTGTTGGTTTACAGCCTTACACTGGACTGATAGAGCGCTACCAGAGCTAGTTTTTGGAGCTATATACCCAGTGTAACTTATCTTACATGTAAACATGGTATTAGCCTCAGGAACCATGAGTTGCTAAACTGATATGCTGCTGATGTTATGCCGGTTTTGGATTTAAAAAAAAAAAAAAA]

[-] EMBL CA761548             [TTCAGCCCAGAGCGGCAAGGCAAAAGGGGTTGAAAGGTGCAGATCACAAAAAATGGGGGATTTTTCAGCACTAAGGAAGAGCTCCCTTGTGTTAATAAGCTCCCTGACCGTAAAAGGTATAAGGGAGAGAGCTCTCAAACGGCAGCTGGACAAGTTGTACAGTAAGATAAGTAATGCTTCTGGAGAACCGATCAAAAGAAATCCCCCCCAAATTGTTGCTTGAAGAGGCTGTATTGCGCCGTTCCCCACGTGTCCGGGCTCAACCAAGGGATAACCCATCCATGTCATTCCTGAAGTATGTCAACAAATGGAAGGATAACTAAGTAGCCAAGAGGACAGCTTGTCCGCAGGTGGGGGAACTGAGCTAGCTACTCGATGACAGGGTTTTGTTTTCAGAGGAACATATATGAAGGTCTGATGAGGTGGTATGTTATTTGTTAGCCAATCCTCATGGCTGTTCTTTGAGCAATCATCACTAGGTAGCAAAACCGATTAACCTGTTGGTTTACAGCCTTACACTGGACTGATAGAGCGCTACCAGAGCTAGTTTTTGGAGCTATATACCCAGTGTAACTTATCTTACATGTAAACATGGTATTAGCCTCAGGAACCATGAGTTGCTAAACTGATATGCTGCTGATGTTATGCCGGTTTTGGATTTAAAAAAAAAAAAAAA]




>consensus_9837#1
TTCAGCCCAGAGCGGCAAGGCAAAAGGGGTTGAAAGGTGCAGATCACAAAAAATGGGGGA
TTTTTCAGCACTAAGGAAGAGCTCCCTTGTGTTAATAAGCTCCCTGACCGTAAAAGGTAT
AAGGGAGAGAGCTCTCAAACGGCAGCTGGACAAGTTGTACAGTAAGATAAGTAATGCTTC
TGGAGAACCGATCAAAAGAAATCCCCCCCAAATTGTTGCTTGAAGAGGCTGTATTGCGCC
GTTCCCCACGTGTCCGGGCTCAACCAAGGGATAACCCATCCATGTCATTCCTGAAGTATG
TCAACAAATGGAAGGATAACTAAGTAGCCAAGAGGACAGCTTGTCCGCAGGTGGGGGAAC
TGAGCTAGCTACTCGATGACAGGGTTTTGTTTTCAGAGGAACATATATGAAGGTCTGATG
AGGTGGTATGTTATTTGTTAGCCAATCCTCATGGCTGTTCTTTGAGCAATCATCACTAGG
TAGCAAAACCGATTAACCTGTTGGTTTACAGCCTTACACTGGACTGATAGAGCGCTACCA
GAGCTAGTTTTTGGAGCTATATACCCAGTGTAACTTATCTTACATGTAAACATGGTATTA
GCCTCAGGAACCATGAGTTGCTAAACTGATATGCTGCTGATGTTATGCCGGTTTTGGATT
TAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9837#0      GCGAGAGCGCCAAACAAATCGAACGCCCATTTCCCCAACGCCTCGCGCCACCCGCGCCGA 60
consensus_9837#1      ------------------------------------------------------------
                                                                                  

consensus_9837#0      TCCGTTCGCCTCCGCCGCCGCCGCGGCCGCCTCGCGGGCTCCCCGGCGACCCCCCCGCTC 120
consensus_9837#1      ------------------------------------------------------------
                                                                                  

consensus_9837#0      GTTCCCGTGCCGTGCCGTGCCGTGTCGGCGTGTGCCCCCGCCCTGCCTGACCTGTCGTCG 180
consensus_9837#1      ------------------------------------------------------------
                                                                                  

consensus_9837#0      GTTGGATCGGAGGTCCAATGCCTCTTTTCAAGAGGAAACCTTTCTCCTTACTTGAGCCCC 240
consensus_9837#1      ------------------------------------------------------------
                                                                                  

consensus_9837#0      CCAAGGACTTGGATTCTAAGGAGAAGGTTTTCCAAATTCGGTTCACAAGGGAGATATTCC 300
consensus_9837#1      ------------------------------------------------------------
                                                                                  

consensus_9837#0      GAGATTACCAAGACTACATAAACAGGTTGAATCTTTATCGGCAAAGGGTTTGGTCATGTA 360
consensus_9837#1      ------------------------------------------------------------
                                                                                  

consensus_9837#0      AGATATCCGGAAAATCAAACTTGACTTTTGAAGAAGCTTTGGTCTCCGAGCATCATGCAG 420
consensus_9837#1      ------------------------------------------------------------
                                                                                  

consensus_9837#0      TGTCAAAGGCTCAGAAATTACCCACAGAACTGATGGCTCCTGTTCTTCGGATGATTCAAT 480
consensus_9837#1      ------------------------------------------------------------
                                                                                  

consensus_9837#0      ACAGCACTCTTGGATTATATGAGCTTGTTGAGAAGATATATGCTAGCCTGCAGGAAGCTG 540
consensus_9837#1      ------------------------------------------------------------
                                                                                  

consensus_9837#0      TATTTGAAGGATTAGAATTATATGCTAAACAGGATGGTTTAGAGGCTGCTTGCAGGATTT 600
consensus_9837#1      ------------------------------------------------------------
                                                                                  

consensus_9837#0      TGAAGATTTTAGGGTCTGATGGCACCAAGATGTATGAAGTTGGTTGGCTTCTTAGGGACA 660
consensus_9837#1      ------------------------------------------------------------
                                                                                  

consensus_9837#0      AGACTATCATCAGTACGTCAGTGATCAAAGGTGAAGACTTGATTCACCGGAGGCCACCTG 720
consensus_9837#1      ------------------------------------------------------------
                                                                                  

consensus_9837#0      TTAGTAGGAATACGCTGAAGATTTTTATTAGAGATGCAACTTCTCAAAATGCCCCATGGG 780
consensus_9837#1      ------------------------------------------------------------
                                                                                  

consensus_9837#0      TTATACATGAAAATCTTGCCAAAAGATATGGCATACCCATTGAGCCCCCGAATGACATGA 840
consensus_9837#1      ------------------------------------------------------------
                                                                                  

consensus_9837#0      TGTTTGGTGAAGGTTTGCAAAAGAAAGGGAGGAAAAGACGTGAGGATGGACCTATGGGAG 900
consensus_9837#1      ------------------------------------------------------------
                                                                                  

consensus_9837#0      ATCCCAAAAAAAAGATGAAGAACGATGAGGAACACATAAATGTTCCAATTAAGTACCCAA 960
consensus_9837#1      ------------------------------------------------------------
                                                                                  

consensus_9837#0      TAGATGATCTCTTAGTACAACCTTCTGCAGATGATCATGCTTTATTGAAGAGACCTCCTC 1020
consensus_9837#1      ------------------------------------------------------------
                                                                                  

consensus_9837#0      TGGCTACAGATTTTAGAGTACCAAAATATTCTGTGGGCGATCTCCTTATGGTATGGGACT 1080
consensus_9837#1      ------------------------------------------------------------
                                                                                  

consensus_9837#0      TCTGCTTGTCCTTCGGGAGGGTTCTGAATCTATCCCCATTTTCACTGGTAGATTTGGAGA 1140
consensus_9837#1      ------------------------------------------------------------
                                                                                  

consensus_9837#0      ATGCAATTTGCCACAAAGAAAGCAATGCACTTCTTGTGGAAATACATACAGCTATATTCC 1200
consensus_9837#1      ------------------------------------------------------------
                                                                                  

consensus_9837#0      ACTTGCTTATTAAGGATGAAGGTGACTATTTCACTATTCTGCGGACCAAGAAACGGAAGC 1260
consensus_9837#1      ------------------------------------------------------------
                                                                                  

consensus_9837#0      TAAAGGTGACTTTAGTAACATGGGCTGAATATCTCTGTGATTTCTTGGAAATGACAAAAA 1320
consensus_9837#1      ------------------------------------------------------------
                                                                                  

consensus_9837#0      CTGAAGAACTCACCAGAAACATTGCAACAGTAAGAAAGGGTTATTATAGTCTTATTGATA 1380
consensus_9837#1      ------------------------------------------------------------
                                                                                  

consensus_9837#0      CTGATATCAAACTTAAGATTCTCCGGGAACTAGTAGAAGAAGCTATTACAACTTCTCCTG 1440
consensus_9837#1      ------------------------------------------------------------
                                                                                  

consensus_9837#0      TAAGAGAGAAACTAAGTGAACGGGTGGACCAGCGGCAAGCGCTCGCTGCGACTAAAAGAG 1500
consensus_9837#1      ------------------------------------------------------------
                                                                                  

consensus_9837#0      AGAGTACTAGAAAGGCAAAGGATGAGCAGAACTCAAGCATTGATGGATTGCAAGATGACA 1560
consensus_9837#1      ------------------------------------------------------------
                                                                                  

consensus_9837#0      ATGAGAGTGTTGATGAGCAGGGTAAGGGGAAAGAAGAAAAGGATAAGAACAATATCTCTC 1620
consensus_9837#1      ------------------------------------------------------------
                                                                                  

consensus_9837#0      GAAGCAAGACAGAAGGGAAACGCCATGGGGTACAGCACCTCGAAACAGAGATTGAAAAAT 1680
consensus_9837#1      ------------------------------------------------------------
                                                                                  

consensus_9837#0      TATCCATCCGTTCCAGCCCCCTTGGAAAAGACAGACACTATAACAGGTATTGGTTTTTCA 1740
consensus_9837#1      -------------------------------------------------TTCAGCCCAGA 11
                                                                       **        *

consensus_9837#0      GGCGTGAAGGAAGGCTTTTTGTTGAAAGTGCAGATTCAAAAGAATGGGG-ATACTACAGC 1799
consensus_9837#1      GCGGCAAGGCAAAAGGGGTTG--AAAGGTGCAGATCACAAAAAATGGGGGATTTTTCAGC 69
                      *  *  * * **      ***   ** ********   *** ******* **  * ****

consensus_9837#0      ACTAAGGAAGAGCTCGAT-GTGTTAATGAGCTCACTGAACGTAAAAGGTTTAAGGGAGAG 1858
consensus_9837#1      ACTAAGGAAGAGCTCCCTTGTGTTAATAAGCTCCCTGACCGTAAAAGGTATAAGGGAGAG 129
                      ***************  * ******** ***** **** ********** **********

consensus_9837#0      AGCTCTCAAACGGCAGCTGGACAAGTTGTACAGTAAGATAAGTAATGCT-CTGGAGAAAC 1917
consensus_9837#1      AGCTCTCAAACGGCAGCTGGACAAGTTGTACAGTAAGATAAGTAATGCTTCTGGAGAACC 189
                      ************************************************* ******** *

consensus_9837#0      GATCAAAAGAAATCACACACAAATTGTTGCTTGAAGAGGCTGTATTGCGCCGTTCCACAC 1977
consensus_9837#1      GATCAAAAGAAATCCCCCCCAAATTGTTGCTTGAAGAGGCTGTATTGCGCCGTTCCCCAC 249
                      ************** * * ************************************* ***

consensus_9837#0      GTGTCCGGGCTCAACCAAGGGATAACCCATCCATGTCATTCCTGAAGTATGTCAACAAAT 2037
consensus_9837#1      GTGTCCGGGCTCAACCAAGGGATAACCCATCCATGTCATTCCTGAAGTATGTCAACAAAT 309
                      ************************************************************

consensus_9837#0      GGAAGGATAACTAAGTAGCCAAGAGGACAGCTTGTCCGCAGGTGGGGGAACTGAGCTAGC 2097
consensus_9837#1      GGAAGGATAACTAAGTAGCCAAGAGGACAGCTTGTCCGCAGGTGGGGGAACTGAGCTAGC 369
                      ************************************************************

consensus_9837#0      TACTCGATGACAGGGTTTTGTTTTCAGAGGAACATATATGAAGGTCTGATGAGGTGGTAT 2157
consensus_9837#1      TACTCGATGACAGGGTTTTGTTTTCAGAGGAACATATATGAAGGTCTGATGAGGTGGTAT 429
                      ************************************************************

consensus_9837#0      GTTATTTGTTAGCCAATCCTCATGGCTGTTCTTTGAGCAATCATCACTAGGTAGCAAAAC 2217
consensus_9837#1      GTTATTTGTTAGCCAATCCTCATGGCTGTTCTTTGAGCAATCATCACTAGGTAGCAAAAC 489
                      ************************************************************

consensus_9837#0      CAATTAACCTGTTGGTTTACAGCCTTACACTGGACTGATAGAGCGCTACCAGAGCTAGTT 2277
consensus_9837#1      CGATTAACCTGTTGGTTTACAGCCTTACACTGGACTGATAGAGCGCTACCAGAGCTAGTT 549
                      * **********************************************************

consensus_9837#0      TTTGGAGCTATATACCCAGTGTAACTTATCTTACATGTAAACATGGTATTAGCCTCAGGA 2337
consensus_9837#1      TTTGGAGCTATATACCCAGTGTAACTTATCTTACATGTAAACATGGTATTAGCCTCAGGA 609
                      ************************************************************

consensus_9837#0      ACCATGAGTTGCTAAACTGATATGCTGCTGATGTTATGCCGGTTTTGGATTTATCAGTCG 2397
consensus_9837#1      ACCATGAGTTGCTAAACTGATATGCTGCTGATGTTATGCCGGTTTTGGATTTAAAAAAAA 669
                      *****************************************************  *    

consensus_9837#0      CAGGGGATACATTTCTCTATCATTATATTG 2427
consensus_9837#1      AAAAAAA----------------------- 676
                       *    *


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)