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Oryza sativa
cluster # 9840 cluster # 9840       Sequences # 7       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9840#0 length = 786 sequences # 7  
consensusID : consensus_9840#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 786
fasta sequence 
                              [CTGAAGGAGTAGAAAACAGCTCAAAGCAAAGCAAAGCACAACACAATCAAAGCCTCATACAAGAAGCTAGCTAGCTAGTACTCAAGCTAAATACCTAGCTAGCAGTAGCAGGCGACCAGCTGCATTTTTCCAGAGGAAAAATCTCTCAGTTTAGCTTAATTAATTAGCTCTTGGGAGAAGAAGGCAAGAAGAAAATGGACAGGGTGAACAGGCTGGCGGCGCAGCGGGCGGTGGTGATCTTCAGCATGAGCTCGTGCTGCATGTGCCACACCGTGACGCGCCTCTTCTGCGAGCTCGGGGTGAACCCGACGGTGGTGGAGCTGGACGAGGACCCGAGGGGGAAGGAGAT-GGAGAAGGCGCTGGCGAGGCTCCTCGGCCGCAGCCCCGCCGTGCCGGCGGTGTTCATCGGCGGGAGGCTCGTCGGCTCCACCGACAAGGTCATGTCGCTGCACCTCAGCGGCAACCTTGTCCCGCTGCTTCGCAAT-GCGGGTGCCCTC-TGGGTGTAGCACCAACGACGCAACTATACCTACCAGCGACTGGTTCTTGATTTGGACTGATACCGTGGCGCAGAATAATTTTATACGGGTACTTTGGTTTGTATCAGGCAGGTCAGGTATATCTAAGGGAAAATAAATAGTACGTGCAGGCCTTTTTTGCACTGCAATACTAGTAAATCTATAGAGAGTGGGGAATTAAGTGTGTCATGTCAGCCGCCTGTAAGGCTCTTTTGAGATGTAATAATGACACATATCCGTTTAATGGAGTATACCTCTTTTGTCAAAAAAA]

[+] EMBL CF278197             [CTGAAGGAGTAGAAAACAGCTCAAAGCAAAGCAAAGCACAACACAATCAAAGCCTCATACAAGAAGCTAGCTAGCTAGTACTCAAGCTAAATACCTAGCTAGCAGTAGCAGGCGACCAGCTGCATTTTTCCAGAGGAAAAATCTCTCAGTTTAGCTTAATTAATTAGCTCCTGGGAGAAGAAGGCAAGAAGAAAATGGACAGGGTGAACAGGCTGGCGGCGCAGCGGGCGGTGGTGATCTTCAGCATGAGCTCGTGCTGCATGTGCCACACCGTGACGCGCCTCTTCTGCGAGCTCGGGGTGAACCCGACGGTGGTGGAGCTGGACGAGGACCCGAGGGGGAAGGA ATGGGAGAAGGCGCTGGCGAGGCTCCTCGGCCGCAGCCCCGCCGTGCCGGCGGTGTTCATCGGCGGGAGGCTCGTCGGCTCCACCGACAAGGTCATGTCGCTGCACCTCAGCGGCAACCTTGTCCCGCTGCTTC CAATGGCGGGTGCCCTCTTGGGTGTAGCACCAACGACGCAACTATACCTACCAGCGACTGGTTCTTGATTTGGACTGATACCGTGGCGCAGAATAATTTTATACGGGTACTTT                                                                                                                                                                                                  ]
[+] EMBL AK107858             [                      AAAGCAAAGCAAAGCACAACACAATCAAAGCCTCATACAAGAAGCTAGCTAGCTAGTACTCAAGCTAAATACCTAGCTAGCAGTAGCAGGCGACCAGCTGCATTTTTCCAGAGGAAAAATCTCTCAGTTTAGCTTAATTAATTAGCTCTTGGGAGAAGAAGGCAAGAAGAAAATGGACAGGGTGAACAGGCTGGCGGCGCAGCGGGCGGTGGTGATCTTCAGCATGAGCTCGTGCTGCATGTGCCACACCGTGACGCGCCTCTTCTGCGAGCTCGGGGTGAACCCGACGGTGGTGGAGCTGGACGAGGACCCGAGGGGGAAGGAGAT GGAGAAGGCGCTGGCGAGGCTCCTCGGCCGCAGCCCCGCCGTGCCGGCGGTGTTCATCGGCGGGAGGCTCGTCGGCTCCACCGACAAGGTCATGTCGCTGCACCTCAGCGGCAACCTTGTCCCGCTGCTTCGCAAT GCGGGTGCCCTC TGGGTGTAGCACCAACGACGCAACTATACCTACCAGCGACTGGTTCTTGATTTGGACTGATACCGTGGCGCAGAATAATTTTATACGGGTACTTTGGTTTGTATCAGGCAGGTCAGGTATATCTAAGGGAAAATAAATAGTACGTGCAGGCCTTTTTTGCACTGCAATACTAGTAAATCTATAGAGAGTGGGGAATTAAGTGTGTCATGTCAGCCGCCTGTAAGGCTCTTTTGAGATGTAATAATGACACATATCCGTTTAATGGAGTATAC                 ]
[+] EMBL CF317482             [                       AAGCAAAGCAAAGCACAACACAATCAAAGCCTCATACAAGAAGCTAGCTAGCTAGTACTCAAGCTAAATACCTAGCTAGCAGTAGCAGGCGACCAGCTGCATTTTTCCAGAGGAAAAATCTCTCAGTTTAGCTTAATTAATTAGCTCTTGGGAGAAGAAGGCAAGAAGAAAATGGACAGGGTGGACAGGCTGGCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CF336208             [                       AAGCAAAGCAAAGCACAACACAATCAAAGCCTCATACAAGAAGCTAGCTAGCTAGTACTCAAGCTAAATACCTAGCTAGCAGTAGCAGGCGACCAGCTGCATTTTTCCAGAGGAAAAATCTCTCAGTTTAGCTTAATTAATTAGCTCTTGGGAGAAGAAGGCAAGAAGAAAATGGACAGGGTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CF299700             [                         GCAAAGCAAAGCACAACACAATCAAAGCCTCATACAAGAAGCTAGCTAGCTAGTACTCAAGCTAAATACCTAGCTAGCAGTAGCAGGCGACCAGCTGCATTTTTCCAGAGGAAAAATCTCTCAGTTTAGCTTAATTAATTAGCTCTTGGGAGAAGAAGGCAAGAAGAAAATGGACAGGGTGAACAGGCTGGCGGCGCAGCGGGCGGTGGTGATCTTCAGCATGAGCTCGTGCTGCATGTGCCACACCGTGACGCGCCTCTTCTGCGAGCTCGGGGTGAACCCGACGGTGGTGGAGCTGGACGAGGACCCGAGGGGGAAGGAGAG GGAGAAGGCGCTGGCGAGGCTCCTCGGCCGCAGCCCCGCCGTGCCGGCGGTGTTCATCGGCGGGAGGCTCGTCGGCTCCACCGACAAGGTCATGTCGCTGCACCTCAGCGGCAACCTTGTCCCGCTGCTTCGCAAT GCGGGTGCCCTC TGGGTGTAGCACCAACGACGCAACTATACCTACCAGCGACTGGTTCTTGATTTGGACTGATAC                                                                                                                                                                                                                                  ]
[-] EMBL CF278198             [                                                                                                                                                                                                                                                          CTCGTGCTGCATGTGCCACACCGTGACGCGCCTCTTCTGCGAGCTCGGGGTGAACCCGACGGTGGTGGAGCTGGACGAGGACCCGAGGGGGAAGGAGAT GGAGAAGGCGCTGGCGAGGCTCCTCGGCCGCAGCCCCGCCGTGCCGGCGGTGTTCATCGGCGGGAGGCTCGTCGGCTCCACCGACAAGGTCATGTCGCTGCACCTCAGCGGCAACCTTGTCCCGCTGCTTCGCAAT GCGGGTGCCCTC TGGGTGTAGCACCAACGACGCAACTATACCTACCAGCGACTGGTTCTTGATTTGGACTGATACCGTGGCGCAGAATAATTTTATACGGGTACTTTGGTTTGTATCAGGCAGGTCAGGTATATCTAAGGGAAAATAAATAGTACGTGCAGGCCTTTTTAGCACTGCAATACTAGTAAATATA                                                                                                            ]
[-] EMBL CF336209             [                                                                                                                                                                                                                                                                                                                                                                                                                     ATCGGCGGGAGGCTCGTCGGCTCCACCGACCAAGTCATGTCGCTGCACCTCAGCGGCAACCTTGTCCCGCTGCTTCGCAAT GCGGGTGCCCTC TGGGTGTAGCACCAACGACGCAACTATACCTACCAGCGACTGGTTCTTGATTTGGACTGATACCGTGGCGCAGAATAATTTTATACGGGTACTTTGGTTTGTATCAGGCAGGTCAGGTATATCTAAGGGAAAATAAATAGTACGTGCAGGCCTTTTTTGCACTGCAATACTAGTAAATCTATAGAGAGTGGGGAATTAAGTGTGTCATGTCAGCCGCCTGTAAGGCTCTTTTGAGATGTAATAATGACACATATCCGTTTAATGGAGTATACCTCTTTTGTCAAAAAAA]




>consensus_9840#0
CTGAAGGAGTAGAAAACAGCTCAAAGCAAAGCAAAGCACAACACAATCAAAGCCTCATAC
AAGAAGCTAGCTAGCTAGTACTCAAGCTAAATACCTAGCTAGCAGTAGCAGGCGACCAGC
TGCATTTTTCCAGAGGAAAAATCTCTCAGTTTAGCTTAATTAATTAGCTCTTGGGAGAAG
AAGGCAAGAAGAAAATGGACAGGGTGAACAGGCTGGCGGCGCAGCGGGCGGTGGTGATCT
TCAGCATGAGCTCGTGCTGCATGTGCCACACCGTGACGCGCCTCTTCTGCGAGCTCGGGG
TGAACCCGACGGTGGTGGAGCTGGACGAGGACCCGAGGGGGAAGGAGATGGAGAAGGCGC
TGGCGAGGCTCCTCGGCCGCAGCCCCGCCGTGCCGGCGGTGTTCATCGGCGGGAGGCTCG
TCGGCTCCACCGACAAGGTCATGTCGCTGCACCTCAGCGGCAACCTTGTCCCGCTGCTTC
GCAATGCGGGTGCCCTCTGGGTGTAGCACCAACGACGCAACTATACCTACCAGCGACTGG
TTCTTGATTTGGACTGATACCGTGGCGCAGAATAATTTTATACGGGTACTTTGGTTTGTA
TCAGGCAGGTCAGGTATATCTAAGGGAAAATAAATAGTACGTGCAGGCCTTTTTTGCACT
GCAATACTAGTAAATCTATAGAGAGTGGGGAATTAAGTGTGTCATGTCAGCCGCCTGTAA
GGCTCTTTTGAGATGTAATAATGACACATATCCGTTTAATGGAGTATACCTCTTTTGTCA
AAAAAA

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)