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Oryza sativa
cluster # 9847 cluster # 9847       Sequences # 7       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9847#0 length = 1201 sequences # 1  
consensus_9847#1 length = 1160 sequences # 2  
consensus_9847#2 length = 1027 sequences # 4  

consensusID : consensus_9847#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1201
fasta sequence
                              [GCCATGGTCCTAAAGCTTCTTGATGGTGGTGGCGGCGGCGGCGGCGACGACGGATTCAATCCCTCTGCTGCCGAGCACAAGCGACACGAGCAGATCGGCAACCTCGCCGTCGAGCTCAAGCACCAGCGCCTTGCTTCTAAGCCATCAGCTATGGTACGGAGGTAAGCTAGCTTCATGGGGTTGCCGGCGGCGGCTGATTTGGTCCCTTGCAGCTGAGCACAAGCGACGCGCGAGCAGATCGGCGACCTCACCGGCGAGCTCGAGCACCACGCAGTGCATTAGGCGACACAACATCAATCTCAAGTGCGGGCCACCCAATCGATTGCCTTGCTTCCGAGTTCTAGCCTGAGCTCTTGGAACTAGCGCGCAGGTACTTGTCTTTGATCCTAATCTTCTTTTGTGGTTTTGCTTTAAATCTGTTCTTTTGGTACAATATGACAATGATATTTTGTAGCATAACAACATTTCAAAAATATTTTGTAGCCTGAAGAAGTGAAGATAATTTTTGCAATCTCAGACCCCCTAGAATGTATAGTTTAGTAACTTGCAAGTGTAAATTGTTTCTGTACTAAATACATTAAATAAATTAATTGAACATGTAGTGAAAATAAGTGTCATATTGCTGAATCGGTCTCCCTTGATGCAACCCTTGACTTTGTTGAGTCATTAACATAGGAGTGTGAACTGAAGTATGTGTGTATGCATCCAGAGCAGCGCTATACTCTGACACGTGTAAAAAATTGTGGTTACTGGGAACCTCTAGATGATCCTAGCACAAGAAAAAGTAATGGAAAAAGATCAACGACAATAATCAACGCAAGCAGTTTCTTTTAAGAAAAACAATTATGTGCTGAGTATACCATTACTGTAGTATGTACTGCTTGTGGTTGTGCTTGCATCTCTACAGGTTGAGGATGCGGTGATTGGGCTAGGACATCATTGATTTTCTTTCTTTTCCTCCTTGATGAAGCTTTATCTAAGCCGCCAATAGGTCTTGCTGATCCACGAATTTCCTTTTTCTTGAGCTTAATGCCTAATGGCTTCCTAGGCTTCTAATTTTCTTTCACACCTGCAAAGGCAAATTACGACATGCATATTTAAAAAAAAGCTGTGATCCAATCATAGGACTAATAATTACTTTATAGAACTGTTAAACGAACCTTGTGGAGATGACGAGGTCTCTAAATCTGGATTGCATCTG]

[+] EMBL AK108062             [GCCATGGTCCTAAAGCTTCTTGATGGTGGTGGCGGCGGCGGCGGCGACGACGGATTCAATCCCTCTGCTGCCGAGCACAAGCGACACGAGCAGATCGGCAACCTCGCCGTCGAGCTCAAGCACCAGCGCCTTGCTTCTAAGCCATCAGCTATGGTACGGAGGTAAGCTAGCTTCATGGGGTTGCCGGCGGCGGCTGATTTGGTCCCTTGCAGCTGAGCACAAGCGACGCGCGAGCAGATCGGCGACCTCACCGGCGAGCTCGAGCACCACGCAGTGCATTAGGCGACACAACATCAATCTCAAGTGCGGGCCACCCAATCGATTGCCTTGCTTCCGAGTTCTAGCCTGAGCTCTTGGAACTAGCGCGCAGGTACTTGTCTTTGATCCTAATCTTCTTTTGTGGTTTTGCTTTAAATCTGTTCTTTTGGTACAATATGACAATGATATTTTGTAGCATAACAACATTTCAAAAATATTTTGTAGCCTGAAGAAGTGAAGATAATTTTTGCAATCTCAGACCCCCTAGAATGTATAGTTTAGTAACTTGCAAGTGTAAATTGTTTCTGTACTAAATACATTAAATAAATTAATTGAACATGTAGTGAAAATAAGTGTCATATTGCTGAATCGGTCTCCCTTGATGCAACCCTTGACTTTGTTGAGTCATTAACATAGGAGTGTGAACTGAAGTATGTGTGTATGCATCCAGAGCAGCGCTATACTCTGACACGTGTAAAAAATTGTGGTTACTGGGAACCTCTAGATGATCCTAGCACAAGAAAAAGTAATGGAAAAAGATCAACGACAATAATCAACGCAAGCAGTTTCTTTTAAGAAAAACAATTATGTGCTGAGTATACCATTACTGTAGTATGTACTGCTTGTGGTTGTGCTTGCATCTCTACAGGTTGAGGATGCGGTGATTGGGCTAGGACATCATTGATTTTCTTTCTTTTCCTCCTTGATGAAGCTTTATCTAAGCCGCCAATAGGTCTTGCTGATCCACGAATTTCCTTTTTCTTGAGCTTAATGCCTAATGGCTTCCTAGGCTTCTAATTTTCTTTCACACCTGCAAAGGCAAATTACGACATGCATATTTAAAAAAAAGCTGTGATCCAATCATAGGACTAATAATTACTTTATAGAACTGTTAAACGAACCTTGTGGAGATGACGAGGTCTCTAAATCTGGATTGCATCTG]


>consensus_9847#0 GCCATGGTCCTAAAGCTTCTTGATGGTGGTGGCGGCGGCGGCGGCGACGACGGATTCAAT CCCTCTGCTGCCGAGCACAAGCGACACGAGCAGATCGGCAACCTCGCCGTCGAGCTCAAG CACCAGCGCCTTGCTTCTAAGCCATCAGCTATGGTACGGAGGTAAGCTAGCTTCATGGGG TTGCCGGCGGCGGCTGATTTGGTCCCTTGCAGCTGAGCACAAGCGACGCGCGAGCAGATC GGCGACCTCACCGGCGAGCTCGAGCACCACGCAGTGCATTAGGCGACACAACATCAATCT CAAGTGCGGGCCACCCAATCGATTGCCTTGCTTCCGAGTTCTAGCCTGAGCTCTTGGAAC TAGCGCGCAGGTACTTGTCTTTGATCCTAATCTTCTTTTGTGGTTTTGCTTTAAATCTGT TCTTTTGGTACAATATGACAATGATATTTTGTAGCATAACAACATTTCAAAAATATTTTG TAGCCTGAAGAAGTGAAGATAATTTTTGCAATCTCAGACCCCCTAGAATGTATAGTTTAG TAACTTGCAAGTGTAAATTGTTTCTGTACTAAATACATTAAATAAATTAATTGAACATGT AGTGAAAATAAGTGTCATATTGCTGAATCGGTCTCCCTTGATGCAACCCTTGACTTTGTT GAGTCATTAACATAGGAGTGTGAACTGAAGTATGTGTGTATGCATCCAGAGCAGCGCTAT ACTCTGACACGTGTAAAAAATTGTGGTTACTGGGAACCTCTAGATGATCCTAGCACAAGA AAAAGTAATGGAAAAAGATCAACGACAATAATCAACGCAAGCAGTTTCTTTTAAGAAAAA CAATTATGTGCTGAGTATACCATTACTGTAGTATGTACTGCTTGTGGTTGTGCTTGCATC TCTACAGGTTGAGGATGCGGTGATTGGGCTAGGACATCATTGATTTTCTTTCTTTTCCTC CTTGATGAAGCTTTATCTAAGCCGCCAATAGGTCTTGCTGATCCACGAATTTCCTTTTTC TTGAGCTTAATGCCTAATGGCTTCCTAGGCTTCTAATTTTCTTTCACACCTGCAAAGGCA AATTACGACATGCATATTTAAAAAAAAGCTGTGATCCAATCATAGGACTAATAATTACTT TATAGAACTGTTAAACGAACCTTGTGGAGATGACGAGGTCTCTAAATCTGGATTGCATCT G



consensusID : consensus_9847#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1160
fasta sequence
                              [CCACCAGTGTTCCAGATAGACACAACAGGCGCCGACGCACACAACCAAGCTGGCGTTACCCACGACTATTAACGAAACAATACATGCGGCCTGCCTTTACTACGTGAGGTCACCACCTCGGCTTAGGCCCCAGGGAGGCTCTCCATTAGGTGAACTGTGGAAGCGACGTGCGGGCTTTGCTATACCCACTGCGAAGTGTATGCTCCAGCGATAAGTGGGAACGCAGGGTTTCCAGTCCCCGTGTAAACACCGCCAAGAGCCGGTAAATCGCCCTATAGGGGATTGGGAACCGGCCCGCCTGAGGTGAATTTATGTCTCACTAGACTACGTACCGCATCTGTACTTTTTTTTGAAAGAA-CACGGTAGGGG-AGCCCCCACCGTCATATATGCAGTTTTGNAAGTCAGCATTCTGATTCATATGCCACACAGATATCCGATGATGAGTTCCTTGAAATACTATTTTGATTGCTTTAGCCATGGCTGCATCTTCATTTGTCAAAATTGTTTTTGCTTCTTCCCTGACATAACATTTAGAAAAGTATTAAATAACCAAACAAAACTATTAGCAGCCTCATCCTATAGAAGCGCAGCACCAAAAACAGTAGTCTTCTTATGATTATTCACTCCTACAAGCTAGCAAACCAAAAGGACGTCCATCATCCAATTTTCTATATTTTGTGTCAAAGCAAACAACATCACCAAAATCTTCATAGTCAGAAACCATTTTAGAGTCGGCCCAGAAAATGTTTGTTATTAAATCATCCTCGTCAACTTGAATAGAATAGAAAAACTTACATCTTCTGATGCTTTCTTCTCCATATATTCCAAAACTCCTCCTGCATCACCTTGTTTTGTCTGCAGTGATCTCTTTGAGTATAACTTGTTCTTCATGTCAACACTAGTAAAGCCGAGATTCTCAAATCCACATGCTTGTTTTGCCATCAAATCAATGGCTTCTTTAGTAGAAATGCCTACAGATTTTGCGACTTCAACACTTGCAACCTGAGCTTCATTTATCTTCCTTTGTGATCTTAACTGATGAGCCTGGCTTTTTGTTGCAAGATTATGACTATGTTCAGGCACAAAGTGGTAGACAGAATATAATCCATCTATGAGACTTATCTTCATACATGCTTGACACTTGCATTGAGTTTCTGGCT]

[-] EMBL AW155180             [CCACCAGTGTTCCAGATAGACACAACAGGCGCCGACGCACACAACCAAGCTGGCGTTACCCACGACTATTAACGAAACAATACATGCGGCCTGCCTTTACTACGTGAGGTCACCACCTCGGCTTAGGCCCCAGGGAGGCTCTCCATTAGGTGAACTGTGGAAGCGACGTGCGGGCTTTGCTATACCCACTGCGAAGTGTATGCTCCAGCGATAAGTGGGAACGCAGGGTTTCCAGTCCCCGTGTAAACACCGCCAAGAGCCGGTAAATCGCCCTATAGGGGATTGGGAACCGGCCCGCCTGAGGTGAATTTATGTCTCACTAGACTACGTACCGCATCTGTACTTTTTTTTGAAAGAA CACGGTAGGGG AGCCCCCACCGTCATATATGCAGTTTTGNAAGTCAGCATTCTGATTCATATGCCACACAGATATCCGATGATGAGTTCCTTGAAATACTATTTTGATTGCTTTAGCCATGGCTGCATCTTCATTTGTCAAAATTGTTTTTGCTTCTTCCCTGACATAACATTTAGAAAAGTATTAAATAACCAAACAAAACTATTAGCAGCCTCATCCTATAGAAGCGCAGCACCAAAAACAGTAGTCTTCTTATGATTATTCACTCCTACAAGCTAGCAAACCAAAAGGACGTCCATCATCCAATTTTCTATATTTTGTGTCAAAGCAAACAACATCACCAAAATCTTCATAGTCAGAAACCATTTTAGAGTCGGCCCAGAAAATGTTTGTTATTAAATCATCCTCGTCAACTTGAATAGAATAGAAAAACTTACATCTTCTGATGCTTTCTTCTCCATATATTCCAAAACTCCTCCTGCATCACCTTGTTTTG                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CB625500             [                                                                                                                                                                                                                                                                                                                                                    tctTTTTTTTTGAAAGAACCACGGTAGGGGAAGCCCGCACCGTCATATATGCAGTTCTGGAAGTCAGCATTCTGATTCATATGCCACACAGATATCCGATGATGAGTTCCTTGAAATACTATTTTGATTGCTTTATCCATGGCTGCATCTTCATTTGTCAAAATTGTTTTTGCTTCTTCCCTGACATAACATTTAGAAAAGTATTAAATAACCAAACAAAACTATTAGCAGCCTCATCCTATAGAAGCGCAGCACCAAAAACAGTAGTCTTCTTATGATTATTCACTCCTACAAGCTAGCAAACCAAAAGGACGTCCATCATCCAATTTTCTATATTTTGTGTCAAAGCAAACAACATCACCAAAATCTTCATAGTCAGAAACCATTTTAGAGTCGGCCCAGAAAATGTTTGTTATTAAATCATCCTCGTCAACCTGAATAGAATAGAAAAACTTACATCTTCTGATGCTTTCTTCTCCATATATTCCAAAACTCCTCCTGCATCACCTTGTTTTGTCTGCAGTGATCTCTTTGAGTATAACTTGTTCTTCATGTCAACACTAGTAAAGCCGAGATTCTCAAATCCACATGCTTGTTTTGCCATCAAATCAATGGCTTCTTTAGTAGAAATGCCTACAGATTTTGCGACTTCAACACTTGCAACCTGAGCTTCATTTATCTTCCTTTGTGATCTTAACTGATGAGCCTGGCTTTTTGTTGCAAGATTATGACTATGTTCAGGCACAAAGTGGTAGACAGAATATAATCCATCTATGAGACTTATCTTCATACATGCTTGACACTTGCATTGAGTTTCTGGCT]


>consensus_9847#1 CCACCAGTGTTCCAGATAGACACAACAGGCGCCGACGCACACAACCAAGCTGGCGTTACC CACGACTATTAACGAAACAATACATGCGGCCTGCCTTTACTACGTGAGGTCACCACCTCG GCTTAGGCCCCAGGGAGGCTCTCCATTAGGTGAACTGTGGAAGCGACGTGCGGGCTTTGC TATACCCACTGCGAAGTGTATGCTCCAGCGATAAGTGGGAACGCAGGGTTTCCAGTCCCC GTGTAAACACCGCCAAGAGCCGGTAAATCGCCCTATAGGGGATTGGGAACCGGCCCGCCT GAGGTGAATTTATGTCTCACTAGACTACGTACCGCATCTGTACTTTTTTTTGAAAGAACA CGGTAGGGGAGCCCCCACCGTCATATATGCAGTTTTGNAAGTCAGCATTCTGATTCATAT GCCACACAGATATCCGATGATGAGTTCCTTGAAATACTATTTTGATTGCTTTAGCCATGG CTGCATCTTCATTTGTCAAAATTGTTTTTGCTTCTTCCCTGACATAACATTTAGAAAAGT ATTAAATAACCAAACAAAACTATTAGCAGCCTCATCCTATAGAAGCGCAGCACCAAAAAC AGTAGTCTTCTTATGATTATTCACTCCTACAAGCTAGCAAACCAAAAGGACGTCCATCAT CCAATTTTCTATATTTTGTGTCAAAGCAAACAACATCACCAAAATCTTCATAGTCAGAAA CCATTTTAGAGTCGGCCCAGAAAATGTTTGTTATTAAATCATCCTCGTCAACTTGAATAG AATAGAAAAACTTACATCTTCTGATGCTTTCTTCTCCATATATTCCAAAACTCCTCCTGC ATCACCTTGTTTTGTCTGCAGTGATCTCTTTGAGTATAACTTGTTCTTCATGTCAACACT AGTAAAGCCGAGATTCTCAAATCCACATGCTTGTTTTGCCATCAAATCAATGGCTTCTTT AGTAGAAATGCCTACAGATTTTGCGACTTCAACACTTGCAACCTGAGCTTCATTTATCTT CCTTTGTGATCTTAACTGATGAGCCTGGCTTTTTGTTGCAAGATTATGACTATGTTCAGG CACAAAGTGGTAGACAGAATATAATCCATCTATGAGACTTATCTTCATACATGCTTGACA CTTGCATTGAGTTTCTGGCT



consensusID : consensus_9847#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1027
fasta sequence
                              [AGAAACAATTCTTTGATGACTTCCTCATCCCATCAGCCATGGTCCTAAAGCTTCTTGATGGTGGTGGCGGCGGCGGCGGCGACGACGGATTCAATCCCTCTG-TGCCGAGCACAAGCGACACGAGCAGATCGGCAACCTCGCCGTCGAGCTCAAGCACCAGCGCCTTGCTTCTAAGCCATCAGCTATGGTACGGAGGTAAGCTAGCTTCATGGGGTTGCCGGCGGCGGCTGATTTGGT-CCTTGCAGCTGAGCACAAGCGACGCGCGAGCAGATCGGCGACCTCACCGGCGAGCTCGAGCACCACGCAGNGCATTAGGCGACACAACATCAATCTCAAGTGCGGGCCACCCAATCGATTGCCTTGCTTCCGAGTTCTAGCCTGAGCTCTTGGAACTAGCNCGCAGGGCATGAGAGCACAGGATACCAGCAAATTCAGACTTCTTGCAGCTGCATTTGACACTAGATTCCAATGCGACCTTTTTGAGTATAACTTATTCTTCATGTCAACACGAGTGAAGCCA-AGATTCTCATATCCACATGATTGTTTTGCCAACAAGTCAACAACCGCTTTAGTTGAAATGCCTACAGATTTTGCAACTTCAACACTTGCAACCTGAGCTTCATTTACCTTCCTTTGTGATCTTAACTGGCCAGCGGATGAATCATCAGGCTCAACAAGATTTGTGAATGACGTCGTTGTAGCAGATGTATTGTCCAAGAACATGGGACTTGCTCCTGCATCATGCAGTTGTGATGCCTCTGATGGAGGAATCATGCTGTTGTTTGGCATAGCACCAAGATCTGGCGTCGATGCCGGTGCTTGATAAGAGAGATTAATTTATCAGGATGCTAATGCATGTTTAGATATGAGTTGTTTGGATGCTGGAGGATTTAACGGGAGAACTGAGAC-AATGGCGCCATAATTCTTTTTCCCGCCAGC-ATTCTATCTATTTGGCGCCTAAAATCTGTTAGTAAAATTAATGGTGTTGTTTCTAACTA--AAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU070162             [AGAAACAATTCTTTGATGACTTCCTCATCCCATCAGCCATGGTCCTAAAGCTTCTTGATGGTGGTGGCGGCGGCGGCGGCGACGACGGATTCAATCCCTCTG TGCCGAGCACAAGCGACACGAGCAGATCGGCAACCTCGCCGTCGAGCTCAAGCACCAGCGCCTTGCTTCTAAGCCATCAGCTATGGTACGGAGGTAAGCTAGCTTCATGGGGTTGCCGGCGGCGGCTGATTTGGT CCTTGCAGCTGAGCACAAGCGACGCGCGAGCAGATCGGCGACCTCACCGGCGAGCTCGAGCACCACGCAGNGCATTAGGCGACACAACATCAATCTCAAGTGCGGGCCACCCAATCGATTGCCTTGCTTCCGAGTTCTAGCCTGAGCTCTTGGAACTAGCNCGCAGGGCATGAGAGCACAGGATACCAGCAAATTCAGACTTCTTGCAGt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CF317572             [                                  AGCCATGGTCCTAAAGCTTCTTGATGGTGGTGGCGGCGGCGGCGGCGACGACGGATTCAATCCCTCTGCTGCCGAGCACAAGCGACACGAGCAGATCGGCAACCTCGCCGTCGAGCTCAAGCACCAGCGCCTTGCTTCTAAGCCATCAGCTATGGTACGGAGGTAAGCTAGCTTCATGGGGTTGCCGGCGGCGGCTGATTTGGTCCCTTGCAGCTGAGCACAAGCGACGCGCGAGCAGATCGGCGACCTCACCGGCGAGCTCGAGCACCACGCAGTGCATTAGGCGACACAACATCAATCTCAAGTGCGGGCCACCCAATCGATTGCCTTGCTTCCGAGTTCTAGCCTGAGCTCTTGGAACTAGCGCGCAGGGCATGAGAGCACAGGATACCAGCAAATTCAAACTTCTTGCAGCTGCATTTGACACTAGATTCCAATGCGACCTTTTTGAGTATAACTTATTCTTCATGTCAACACGAGTGAAGCCA AGATTCTCATATCCACATGATTGTTTTGCCAACAAGTCAACAACCGCTTTAGTTGAAATGCCTACAGATTTTGCAACTTCAACACTTGCAACCTGAGCTTCATTTACCTTCCTTTGTGATCTTAACTGGCCAGCGGATGAATCATC                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BI804920             [                                                                                                                                                                                                                                                                                                                                                                                                                                                        TCTTGCACCTGCATTTGACACTAGA TCCAATGCGACCTTTTTGAGTATAACTTATTCTTCATGTCAACACGAGTGAACCCACAGATTCTCATATCCACATGATTGTTTTGCCAACAAGTCAACAACCGCTTTAGTTGAAATGCCTACAGATTTTGCAACTTCAACACTTGCAACCTGAGCTTCATTTACCTTCCTTTGTGATCTTAACTGGCCAGCGGATGAATCATCAGGCTCAACAAGATTTGTGAATGACGTCGTTGTAGCAGATGTATTGTCCAAGAACATGGGACTTGCTCCTGCATCATGCAGTTGTGATGCCTCTGATGGAGGAATCATGCTGTTGTTTGGCATAGCACCAAGATCTGGCGTCGATGCCGGTGCTTGATAAGAGAGATTAATTTATCAGGATGCTAATGCATGTTTAGATATGAGTTGTTTGGATGCTGGAGGATTTAACGGGAGAACTGAGAC AATGGCGCCATAATTCTTTTTCCCGCCAGC ATTCTATCTATTTGGCGCCTAAAATCTGTTAGTAAAATTAATGGTGTTGTTTCTAACTA  AAAA                         ]
[-] EMBL CF337033             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GAGCTTCATTTACCTTCCTTTGTGATTTTAACTGGCCAGCGGATGAATCATCAGGCTCAACAAGATTTGTGAATGACGTCGTTGTAGCAAATGTATTGTCCAAGAACATGGGACTTGCTCCTGCATCATGCAGTTGTGATGCCTCTGATGGAGGAATCATGCTGTTGTTTGGCATAGCACCAAGATTTGGGGTCGATGCCGGTGCTTGATAAAAGAGATTAATTTATCAGGATGCTAATGCATGTTTAAATATGAGTTGTTTGGATGCTGGAGGATTTAACGGGAGAACTGAGACAAATGGCGCCATAATTTTTTTTCCCGCCAGCAATTTTATTTATTTGGCGCCTAAAATCTGTTAGTAAAATTAATGGTGTTGTTTTTAACTATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_9847#2 AGAAACAATTCTTTGATGACTTCCTCATCCCATCAGCCATGGTCCTAAAGCTTCTTGATG GTGGTGGCGGCGGCGGCGGCGACGACGGATTCAATCCCTCTGTGCCGAGCACAAGCGACA CGAGCAGATCGGCAACCTCGCCGTCGAGCTCAAGCACCAGCGCCTTGCTTCTAAGCCATC AGCTATGGTACGGAGGTAAGCTAGCTTCATGGGGTTGCCGGCGGCGGCTGATTTGGTCCT TGCAGCTGAGCACAAGCGACGCGCGAGCAGATCGGCGACCTCACCGGCGAGCTCGAGCAC CACGCAGNGCATTAGGCGACACAACATCAATCTCAAGTGCGGGCCACCCAATCGATTGCC TTGCTTCCGAGTTCTAGCCTGAGCTCTTGGAACTAGCNCGCAGGGCATGAGAGCACAGGA TACCAGCAAATTCAGACTTCTTGCAGCTGCATTTGACACTAGATTCCAATGCGACCTTTT TGAGTATAACTTATTCTTCATGTCAACACGAGTGAAGCCAAGATTCTCATATCCACATGA TTGTTTTGCCAACAAGTCAACAACCGCTTTAGTTGAAATGCCTACAGATTTTGCAACTTC AACACTTGCAACCTGAGCTTCATTTACCTTCCTTTGTGATCTTAACTGGCCAGCGGATGA ATCATCAGGCTCAACAAGATTTGTGAATGACGTCGTTGTAGCAGATGTATTGTCCAAGAA CATGGGACTTGCTCCTGCATCATGCAGTTGTGATGCCTCTGATGGAGGAATCATGCTGTT GTTTGGCATAGCACCAAGATCTGGCGTCGATGCCGGTGCTTGATAAGAGAGATTAATTTA TCAGGATGCTAATGCATGTTTAGATATGAGTTGTTTGGATGCTGGAGGATTTAACGGGAG AACTGAGACAATGGCGCCATAATTCTTTTTCCCGCCAGCATTCTATCTATTTGGCGCCTA AAATCTGTTAGTAAAATTAATGGTGTTGTTTCTAACTAAAAAAAAAAAAAAAAAAAAAAA AAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9847#0      ------------------------------------------------------------
consensus_9847#2      ----------------------------------------AGAAACAATTCTTTGATGAC 20
consensus_9847#1      CCACCAGTGTTCCAGATAGACACAACAGGCGCCGACGCACACAACCAAGCTGGCGTTACC 60
                                                                                  

consensus_9847#0      -------------------GC-CATGGTCCTAAAGCTTCTTGATGGTGGTGGCGGCGGCG 40
consensus_9847#2      TTCC----TCATCCCATCAGC-CATGGTCCTAAAGCTTCTTGATGGTGGTGGCGGCGGCG 75
consensus_9847#1      CACGACTATTAACGAAACAATACATGCGGCCTGCCTTTACTACGTGAGGTCACCACCTCG 120
                                            ****   *      **  *    * ***  *  *  **

consensus_9847#0      GCGGCGACGAC--GGATTCAATCCCTCTGCTGCCGAGCACAAGCGACACGAGCAGATCGG 98
consensus_9847#2      GCGGCGACGAC--GGATTCAATCCCTCTG-TGCCGAGCACAAGCGACACGAGCAGATCGG 132
consensus_9847#1      GCTTAGGCCCCAGGGAGGCTCTCCATTAGGTGAACTGTGGAAGCGACGTGCGGGCTTTGC 180
                      **   * *  *  ***  *  *** *  * **    *   *******  * *    * * 

consensus_9847#0      CAACCTCGCCGTCGAGCTCAAGCACCAGCGCCTTGC-----TTCTAAGCCATCAGCTATG 153
consensus_9847#2      CAACCTCGCCGTCGAGCTCAAGCACCAGCGCCTTGC-----TTCTAAGCCATCAGCTATG 187
consensus_9847#1      TATACCCACTGCGAAGTGTATGCTCCAGCGATAAGTGGGAACGCAGGGTTTCCAGTCCCC 240
                       *  * * * *   **   * ** ******    *        *   *    ***     

consensus_9847#0      GTACGGAGGTAAGCTAGCTTCATGGGGTTGCCGGCGGCGGCTGATTTGGT-CCCTTGCAG 212
consensus_9847#2      GTACGGAGGTAAGCTAGCTTCATGGGGTTGCCGGCGGCGGCTGATTTGGT-CC-TTGCAG 245
consensus_9847#1      GTGTAAACACCGCCAAGAGCCGGTAAATCGCC--CTATAGGGGATTGGGAACCGGCCCGC 298
                      **    *      * **   *      * ***  *    *  **** **  **    *  

consensus_9847#0      CTGAGCACAAGCGACGCGCGAGCAGATCGGCGACCTCACCGGCGAGCTCGAGCACCACGC 272
consensus_9847#2      CTGAGCACAAGCGACGCGCGAGCAGATCGGCGACCTCACCGGCGAGCTCGAGCACCACGC 305
consensus_9847#1      CTGAGGTGAATTTATGTCTCACTAGACTACGTACCGCATC--TGTACTTTTTTTTGAAAG 356
                      *****   **   * *    *  ***      *** ** *   *  **        *   

consensus_9847#0      AGTGCATTAGGCGA---CACAACATCA-ATCTCAAGT---GCGGGCCACCCAATCGATTG 325
consensus_9847#2      AGNGCATTAGGCGA---CACAACATCA-ATCTCAAGT---GCGGGCCACCCAATCGATTG 358
consensus_9847#1      AACACGGTAGGGGAGCCCCCACCGTCATATATGCAGTTTTGNAAGTCAGCATTCTGATTC 416
                      *   *  **** **   * ** * *** ** *  ***   *   * ** *     **** 

consensus_9847#0      CCTTGCTTCCGAG---TTCTAGCCTGAGCTCTTGGAACTAGCGCGCAGGTACTTGTCTTT 382
consensus_9847#2      CCTTGCTTCCGAG---TTCTAGCCTGAGCTCTTGGAACTAGCNCGCAGG-----GCATGA 410
consensus_9847#1      ATATGCCACACAGATATCCGATGATGAGTTCCTTGAAATACTATTTTGAT---TGCTTTA 473
                         ***  *  **   * * *   **** ** * *** **       *      *  *  

consensus_9847#0      GATCCTAATCTTCTTTTGTGG-TTTTGCTTTAAATCTGTTCTTT--TGGTACAATATGAC 439
consensus_9847#2      GAGCACAGGATACCAGCAAAT-TCAGACTTCTTGCAGCTGCATT--TGACACTAGATTCC 467
consensus_9847#1      GCCATGGCTGCATCTTCATTTGTCAAAATTGTTTTTGCTTCTTCCCTGACATAACATTTA 533
                      *                     *     **        * * *   **  *  * **   

consensus_9847#0      AATGATATTTTGTAGCATAACAACATTTCAAAAATATTTTGTAGCCTGAAGAAGTGAAGA 499
consensus_9847#2      AATGCGACCTTTTTGAGTA-TAACTT-------ATTCTTCAT-GTCAACACGAGTGAAGC 518
consensus_9847#1      GAAAAGTATTAAATAACCAAACAAAACTATTAGCAGCCTCATCCTATAGAAGCGCAGCAC 593
                       *       *        *   *               *  *       *   *      

consensus_9847#0      TAATTTTTGCAATCTCAGACCCCCTAGAATGTATAGTT-TAGTAACTTGCAAGTGTAAAT 558
consensus_9847#2      CAAGATT------CTCATATCCACATGATTGT----TT-TGCCAACAAGTCAAC---AAC 564
consensus_9847#1      CAAAAACA-----GTAGTCTTCTTATGATTATTCACTCCTACAAGCTAGCAAACCAAAAG 648
                       **           *      *    ** * *    *  *   * *  *  *     ** 

consensus_9847#0      TGTTTCTGTA-CTAAATACATTAAATAAATTAATTGAACATGTAGTGAAAATAAGTGTCA 617
consensus_9847#2      CGCTTTAGT--TGAAATGCCT---ACAGATT--TTGCAACT----TCAACACTTGCAACC 613
consensus_9847#1      GACGTCCATCATCCAATTTTC----TATATTTTGTGTCAAAGCAAACAACATCACCAAAA 704
                          *   *     ***         * ***   **           ** *         

consensus_9847#0      TATTGCTGAATCGGTCTCCCTTGATGCAACCCTTGACTTTGTTGAGTCATTAACATAGGA 677
consensus_9847#2      TGA-GCTTCATTTACCTTCCTTTGTGA---TCTTAAC--TGGCCAGCGGATGAATCATCA 667
consensus_9847#1      TCTTCATAGTCAGAAACCATTTTAGAGTCGGCCCAGAAAATGTTTGTTATTAAATCATCC 764
                      *     *             **         *             *    * *   *   

consensus_9847#0      GTGTGAACT----GAAGTATGTGTGT-ATGCATCCAGAGCAGCGCTATACTCTGACA-CG 731
consensus_9847#2      GGCTCAAC-----AAGATTTGTGAATGACGTCGTTGTAGCAGATGTATTGTCCAAGAACA 722
consensus_9847#1      TCGTCAACTTGAATAGAATAGAAAAACTTACATCTTCTGATGCTTTCTTCTCCATATATT 824
                         * ***      *     *                 *  *   * *  **        

consensus_9847#0      TGTAAAAAATTGTGGTTACTGGGAACCTCTAGATGATCCTAGCACAAGAAAAA-GTAATG 790
consensus_9847#2      TGGGACTTGCTCCTGC-ATCATGCAGTTGT-GATGCCTCTGATGGAGGAATCATGCTGTT 780
consensus_9847#1      CCAAAACTCCTCCTGC-ATCACCTTGTTTT----GTCTGCAGTGATCTCTTTG-AGTATA 878
                          *     *   *  *         * *    *                       * 

consensus_9847#0      GAAAAAGATCAACGACAATAATCAACGCAAGCAGTTTCTTTTAAGAAAAACAATTATGTG 850
consensus_9847#2      GTTTGGCAT-AGCACCAAGATCTGGCGTCGATGCCGGTGCTTGATAAGAGAGATTAATTT 839
consensus_9847#1      ACTTGTTCTTCATGTCAACA-CTAGTAAAGCCGAGATTCTCAAATCCACATGCTTGTTTT 937
                              *      *** *                       *         **   * 

consensus_9847#0      CTGAGTATACCATTACTGTAGTATGTACTGCTTGTGGTTGTGCTTGCATCTCTACAGGTT 910
consensus_9847#2      ATCAGGATGCTAAT------GCATGTTTAGATATGAGTTGT--TTGGAT-------GCTG 884
consensus_9847#1      GCCATCAAATCAATG-----GCTTCTTTAG--TAGAAATGC----------------CTA 974
                         *  *    * *      *  * *   *        **                  * 

consensus_9847#0      GAGGATGCGGTGATTGGGCTAGGACATCATTGATTTTCTTTCTTTTCCTCCTTGATGAAG 970
consensus_9847#2      GAGGATTTAACGGGAGAACTGAGACAATGGCGCCATAATTCTTTTTCCCGCC----AGCA 940
consensus_9847#1      CAGATTTTGCGACTTCAACACTTGCAACCTGAGCTTCATTTATCTTCCTTT-----GTGA 1029
                       **  *            *     **         *  **  * ****            

consensus_9847#0      CTTTATCTAAGCCGCCAATAGGTCTTGCTGATCCACGAATTTCCTTTTTCTTGAGCTTAA 1030
consensus_9847#2      TTCTATCTATTTGGCGCCTAAAATCTGTTAGTAAAATTAATGGTGTTGTTTCTAACTAAA 1000
consensus_9847#1      TCTTAACTGAT--GAGCCTGGCTTTTTGTTGCAAGATTATGACTATGTTCAGGCACAAAG 1087
                         ** **     *    *      *  *         *      *  *      *  * 

consensus_9847#0      TGCCTAATGGCTTCCTAGGCTTCTAATTTTCTTTCACACCTGCAAAGGCAAATTACGACA 1090
consensus_9847#2      AAAAAAAAAAAAAAAAAAAAAAAAAAA--------------------------------- 1027
consensus_9847#1      TGGTAGACAGAATATAATCCATCTATGAGACTTATCTTCATACATGCTTGACACTTGCAT 1147
                            *         *       *                                   

consensus_9847#0      TGCATATTTAAAAAAAAGCTGTGATCCAATCATAGGACTAATAATTACTTTATAGAACTG 1150
consensus_9847#2      ------------------------------------------------------------
consensus_9847#1      TGAGTTTCTGGCT----------------------------------------------- 1160
                                                                                  

consensus_9847#0      TTAAACGAACCTTGTGGAGATGACGAGGTCTCTAAATCTGGATTGCATCTG 1201
consensus_9847#2      ---------------------------------------------------
consensus_9847#1      ---------------------------------------------------
                                                                         




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)