cluster # 9849

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Oryza sativa
cluster # 9849 cluster # 9849 Sequences # 7 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9849#0 length = 1277 sequences # 5

consensus_9849#1 length = 1131 sequences # 1
consensus_9849#2 length = 216 sequences # 1

consensusID : consensus_9849#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1277
fasta sequence

                              [GATGCTAATGAAACCAGGATAAAAGGGGATGAATTCTGAAGAAAACCTGAAGAAACCAGGGGAGAGCAAAGGCTCCGTGCCAACGTGCCCGCGGGGAAATGCCTCAGCCCTCAGCCATAGACCTTACCTCATGGCCGTCGTAGCCCCTCCTTCCCTTGCCCTTCCCCAACCTCCTCAGAACCCAACCCCTAAACCTCGCCGCCGGCCGCCGCGAGACGTCGCCTCATGGACGTCCGCCATCGCGCGCCCGGCGAAGCAGGGCGACCTCCCCGCGGCGGCCGCTGCGCTCTCCGCCATGCTCTCCTCCCCCGCGGCGCCCGTCCCCAACGACGTCACCCTTCTCACCGTCCTCTCCGCCTGCGCCGACTCCCCGTCCTCCCCGCTCGCCCGCCGCCTCGCGCTCTCCGTCCACGCCCGCGTGCTCAAGCTCTTCCCCTCCCACCTCCTCCTCTCCACCTGCCTCGTGCGCTTCTACTTCGCGTCCCGCTTGCCCCACCTCGCCCTCCAGCTGTTCGACGCCATGCCCGTGAGGTCCGCCGTCACCTACAACACGGTGATCTCCGGCCTCATGCGGAACGGCCTCGTCGCCGCCGCGTTCGAGGTGTTCGACGGAATGCCGGCGCCGGATAAGGTCTCCTGGACGGCTCTCATCGACGGGTGCGTCAAGAACGGGCGCCACGACGAGGCCATCGACTGCTTCCGCGCCATGCTTCTGGACGGTGTCGAGCCGGACTACGTCACGCTGATAGCCGTCATCTCCGCGTGCGCCGAGGTCGGCGCGCTGGGGCTCGGGATGTGGGTGCACCGGCTCGTGGTCCGGCAGGGGCTGGAGCGCAACGTCAGGATAGCCAACTCGCTCATCGACATGTACGCGCGGTGCGGGCAGGTGGAGCTCGCGCGGCAGGTGTTCAGCGGAATGAGGAAGCGGACGGTGGTCTCCTGGAACTCGATGATCGTTGGGTTCGCCGCCAACGGCCGGTGCGCGGACGCCGTCGAGCACTTCGAGGCGATGCGGAGGGAGGGGTTCAAGCCGGACGCCGTGACGTTCACCGGTGTGCTCACGGCGTGCAGCCACGGCGGCCTCACCGACGAGGGGCTAAGATACTACGACCTGATGAGGGCGGAGTACGGCATCGCGGCGCGGATGGAGCACTACGGCTGCGTGGTCGACCTGCTCGGCCGGTCGGGGCAGCTCGAGGAGGCGATGCGGGTGGTGACCACCATGCCGATGCGGCCAAACGAGGTGGTGCTCGGCGCCCTCCTCGCCGGCTGCCGGA]

[+] EMBL AK072755             [GATGCTAATGAAACCAGGATAAAAGGGGATGAATTCTGAAGAAAACCTGAAGAAACCAGGGGAGAGCAAAGGCTCCGTGCCAACGTGCCCGCGGGGAAATGCCTCAGCCCTCAGCCATAGACCTTACCTCATGGCCGTCGTAGCCCCTCCTTCCCTTGCCCTTCCCCAACCTCCTCAGAACCCAACCCCTAAACCTCGCCGCCGGCCGCCGCGAGACGTCGCCTCATGGACGTCCGCCATCGCGCGCCCGGCGAAGCAGGGCGACCTCCCCGCGGCGGCCGCTGCGCTCTCCGCCATGCTCTCCTCCCCCGCGGCGCCCGTCCCCAACGACGTCACCCTTCTCACCGTCCTCTCCGCCTGCGCCGACTCCCCGTCCTCCCCGCTCGCCCGCCGCCTCGCGCTCTCCGTCCACGCCCGCGTGCTCAAGCTCTTCCCCTCCCACCTCCTCCTCTCCACCTGCCTCGTGCGCTTCTACTTCGCGTCCCGCTTGCCCCACCTCGCCCTCCAGCTGTTCGACGCCATGCCCGTGAGGTCCGCCGTCACCTACAACACGGTGATCTCCGGCCTCATGCGGAACGGCCTCGTCGCCGCCGCGTTCGAGGTGTTCGACGGAATGCCGGCGCCGGATAAGGTCTCCTGGACGGCTCTCATCGACGGGTGCGTCAAGAACGGGCGCCACGACGAGGCCATCGACTGCTTCCGCGCCATGCTTCTGGACGGTGTCGAGCCGGACTACGTCACGCTGATAGCCGTCATCTCCGCGTGCGCCGAGGTCGGCGCGCTGGGGCTCGGGATGTGGGTGCACCGGCTCGTGGTCCGGCAGGGGCTGGAGCGCAACGTCAGGATAGCCAACTCGCTCATCGACATGTACGCGCGGTGCGGGCAGGTGGAGCTCGCGCGGCAGGTGTTCAGCGGAATGAGGAAGCGGACGGTGGTCTCCTGGAACTCGATGATCGTTGGGTTCGCCGCCAACGGCCGGTGCGCGGACGCCGTCGAGCACTTCGAGGCGATGCGGAGGGAGGGGTTCAAGCCGGACGCCGTGACGTTCACCGGCGTGCTCACGGCGTGCAGCCACGGCGGCCTCACCGACGAGGGGCTAAGATACTACGACCTGATGAGGGCGGAGTACGGCATCGCGGCGCGGATGGAGCACTACGGCTGCGTGGTCGACCTGCTCGGCCGGTCGGGGCAGCTCGAGGAGGCGATGCGGGTGGTGACCACCATGCCGATGCGGCCAAACGAGGTGGTGCTCGGCGCCCTCCTCGCCGGCTGCCGG ]
[+] EMBL AK103954             [                                                         AGGGGAGAGCAAAGGCTCCGTGCCAACGTGCCCGCGGGGAAATGCCTCAGCCCTCAGCCATAGACCTTACCTCATGGCCGTCGTAGCCCCTCCTTCCCTTGCCCTTCCCCAACCTCCTCAGAACCCAACCCCTAAACCTCGCCGCCGGCCGCCGCGAGACGTCGCCTCATGGACGTCCGCCATCGCGCGCCCGGCGAAGCAGGGCGACCTCCCCGCGGCGGCCGCTGCGCTCTCCGCCATGCTCTCCTCCCCCGCGGCGCCCGTCCCCAACGACGTCACCCTTCTCACCGTCCTCTCCGCCTGCGCCGACTCCCCGTCCTCCCCGCTCGCCCGCCGCCTCGCGCTCTCCGTCCACGCCCGCGTGCTCAAGCTCTTCCCCTCCCACCTCCTCCTCTCCACCTGCCTCGTGCGCTTCTACTTCGCGTCCCGCTTGCCCCACCTCGCCCTCCAGCTGTTCGACGCCATGCCCGTGAGGTCCGCCGTCACCTACAACACGGTGATCTCCGGCCTCATGCGGAACGGCCTCGTCGCCGCCGCGTTCGAGGTGTTCGACGGAATGCCGGCGCCGGATAAGGTCTCCTGGACGGCTCTCATCGACGGGTGCGTCAAGAACGGGCGCCACGACGAGGCCATCGACTGCTTCCGCGCCATGCTTCTGGACGGTGTCGAGCCGGACTACGTCACGCTGATAGCCGTCATCTCCGCGTGCGCCGAGGTCGGCGCGCTGGGGCTCGGGATGTGGGTGCACCGGCTCGTGGTCCGGCAGGGGCTGGAGCGCAACGTCAGGATAGCCAACTCGCTCATCGACATGTACGCGCGGTGCGGGCAGGTGGAGCTCGCGCGGCAGGTGTTCAGCGGAATGAGGAAGCGGACGGTGGTCTCCTGGAACTCGATGATCGTTGGGTTCGCCGCCAACGGCCGGTGCGCGGACGCCGTCGAGCACTTCGAGGCGATGCGGAGGGAGGGGTTCAAGCCGGACGCCGTGACGTTCACCGGCGTGCTCACGGCGTGCAGCCACGGCGGCCTCACCGACGAGGGGCTAAGATACTACGACCTGATGAGGGCGGAGTACGGCATCGCGGCGCGGATGGAGCACTACGGCTGCGTGGTCGACCTGCTCGGCCGGTCGGGGCAGCTCGAGGAGGCGATGCGGGTGGTGACCACCATGCCGATGCGGCCAAACGAGGTGGTGCTCGGCGCCCTCCTCGCCGGCTGCCGG ]
[+] EMBL CB649232             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ATAGCCGTCATCTCCGCGTGCGCCGAGGTCGGCGCGCTGGGGCTCGGGATGTGGGTGCACCGGCTCGTGGTCCGGCAGGGGCTGGAGCGCAACGTCAGGATAGCCAACTCGCTCATCGACATGTACGCGCGGTGCGGGCAGGTGGAGCTCGCGCGGCAGGTGTTCAGCGGAATGAGGAAGCGGACGGTGGTCTCCTGGAACTCGATGATCGTTGGGTTCGCCGCCAACGGCCGGTGCGCGGACGCCGTCGAGCACTTCGAGGCGATGCGGAGGGAGGGGTTCAAGCCGGACGCCGTGACGTTCACCGGTGTGCTCACGGCGTGCAGCCACGGCGGCCTCACCGACGAGGGGCTAAGATACTACGACCTGATGAGGGCGGAGTACGGCATCGCGGCGCGGATGGAGCACTACGGCTGCGTGGTCGACCTGCTCGGCCGGTCGGGGCAGCTCGAGGAGGCGATGCGGGTGGTGACCACCATGCCGATGCGGCCAAACGAGGTGGTGCTCGGCGCCCTCCTCGCCGGCTGCCGG ]
[+] EMBL CB647984             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ATAGCCGTCATCTCCGCGTGCGCCGAGGTCGGCGCGCTGGGGCTCGGGATGTGGGTGCACCGGCTCGTGGTCCGGCAGGGGCTGGAGCGCAACGTCAGGATAGCCAACTCGCTCATCGACATGTACGCGCGGTGCGGGCAGGTGGAGCTCGCGCGGCAGGTGTTCAGCGGAATGAGGAAGCGGACGGTGGTCTCCTGGAACTCGATGATCGTTGGGTTCGCCGCCAACGGCCGGTGCGCGGACGCCGTCGAGCACTTCGAGGCGATGCGGAGGGAGGGGTTCAAGCCGGACGCCGTGACGTTCACCGGTGTGCTCACGGCGTGCAGCCACGGCGGCCTCACCGACGAGGGGCTAAGATACTACGACCTGATGAGGGCGGAGTACGGCATCGCGGCGCGGATGGAGCACTACGGCTGCGTGGTCGACCTGCTCGGCCGGTCGGGGCAGCTCGAGGAGGCGATGCGGGTGGTGACCACCATGCCGATGCGGCCAAACGAGGTGGTGCTCGGCGCCCTCCTCGCCGGCTGCCGG ]
[-] EMBL CB649233             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AGGGGTTCAAGCCGGACGCCGTGACGTTCACCGGTGTGCTCACGGCGTGCAGCCACGGCGGCCTCACCGACGAGGGGCTAAGATACTACGACCTGATGAGGGCGGAGTACGGCATCGCGGCGCGGATGGAGCACTACGGCTGCGTGGTCGACCTGCTCGGCCGGTCGGGGCAGCTCGAGGAGGCGATGCGGGTGGTGACCACCATGCCGATGCGGCCAAACGAGGTGGTGCTCGGCGCCCTCCTCGCCGGCTGCCGGA]




>consensus_9849#0
GATGCTAATGAAACCAGGATAAAAGGGGATGAATTCTGAAGAAAACCTGAAGAAACCAGG
GGAGAGCAAAGGCTCCGTGCCAACGTGCCCGCGGGGAAATGCCTCAGCCCTCAGCCATAG
ACCTTACCTCATGGCCGTCGTAGCCCCTCCTTCCCTTGCCCTTCCCCAACCTCCTCAGAA
CCCAACCCCTAAACCTCGCCGCCGGCCGCCGCGAGACGTCGCCTCATGGACGTCCGCCAT
CGCGCGCCCGGCGAAGCAGGGCGACCTCCCCGCGGCGGCCGCTGCGCTCTCCGCCATGCT
CTCCTCCCCCGCGGCGCCCGTCCCCAACGACGTCACCCTTCTCACCGTCCTCTCCGCCTG
CGCCGACTCCCCGTCCTCCCCGCTCGCCCGCCGCCTCGCGCTCTCCGTCCACGCCCGCGT
GCTCAAGCTCTTCCCCTCCCACCTCCTCCTCTCCACCTGCCTCGTGCGCTTCTACTTCGC
GTCCCGCTTGCCCCACCTCGCCCTCCAGCTGTTCGACGCCATGCCCGTGAGGTCCGCCGT
CACCTACAACACGGTGATCTCCGGCCTCATGCGGAACGGCCTCGTCGCCGCCGCGTTCGA
GGTGTTCGACGGAATGCCGGCGCCGGATAAGGTCTCCTGGACGGCTCTCATCGACGGGTG
CGTCAAGAACGGGCGCCACGACGAGGCCATCGACTGCTTCCGCGCCATGCTTCTGGACGG
TGTCGAGCCGGACTACGTCACGCTGATAGCCGTCATCTCCGCGTGCGCCGAGGTCGGCGC
GCTGGGGCTCGGGATGTGGGTGCACCGGCTCGTGGTCCGGCAGGGGCTGGAGCGCAACGT
CAGGATAGCCAACTCGCTCATCGACATGTACGCGCGGTGCGGGCAGGTGGAGCTCGCGCG
GCAGGTGTTCAGCGGAATGAGGAAGCGGACGGTGGTCTCCTGGAACTCGATGATCGTTGG
GTTCGCCGCCAACGGCCGGTGCGCGGACGCCGTCGAGCACTTCGAGGCGATGCGGAGGGA
GGGGTTCAAGCCGGACGCCGTGACGTTCACCGGTGTGCTCACGGCGTGCAGCCACGGCGG
CCTCACCGACGAGGGGCTAAGATACTACGACCTGATGAGGGCGGAGTACGGCATCGCGGC
GCGGATGGAGCACTACGGCTGCGTGGTCGACCTGCTCGGCCGGTCGGGGCAGCTCGAGGA
GGCGATGCGGGTGGTGACCACCATGCCGATGCGGCCAAACGAGGTGGTGCTCGGCGCCCT
CCTCGCCGGCTGCCGGA

consensusID : consensus_9849#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1131
fasta sequence

                              [GCAAAGGCTCCGTGCCAACGTGCCCGCGGGGAAATGCCTCAGCCCTCAGCCATAGACCTTACCTCATGGCCGTCGTAGCCCCTCCTTCCCTTGCCCTTCCCCAACCTCCTCAGAACCCAACCCCTAAACCTCGCCGCTGCGCTCTCCGCCATGCTCTCCTCCCCCGCGGCGCCCGTCCCCAACGACGTCACCCTTCTCACCGTCCTCTCCGCCTGCGCCGACTCCCCGTCCTCCCCGCTCGCCCGCCGCCTCGCGCTCTCCGTCCACGCCCGCGTGCTCAAGCTCTTCCCCTCCCACCTCCTCCTCTCCACCTGCCTCGTGCGCTTCTACTTCGCGTCCCGCTTGCCCCACCTCGCCCTCCAGCTGTTCGACGCCATGCCCGTGAGGTCCGCCGTCACCTACAACACGGTGATCTCCGGCCTCATGCGGAACGGCCTCGTCGCCGCCGCGTTCGAGGTGTTCGACGGAATGCCGGCGCCGGATAAGGTCTCCTGGACGGCTCTCATCGACGGGTGCGTCAAGAACGGGCGCCACGACGAGGCCATCGACTGCTTCCGCGCCATGCTTCTGGACGGTGTCGAGCCGGACTACGTCACGCTGATAGCCGTCATCTCCGCGTGCGCCGAGGTCGGCGCGCTGGGGCTCGGGATGTGGGTGCACCGGCTCGTGGTCCGGCAGGGGCTGGAGCGCAACGTCAGGATAGCCAACTCGCTCATCGACATGTACGCGCGGTGCGGGCAGGTGGAGCTCGCGCGGCAGGTGTTCAGCGGAATGAGGAAGCGGACGGTGGTCTCCTGGAACTCGATGATCGTTGGGTTCGCCGCCAACGGCCGGTGCGCGGACGCCGTCGAGCACTTCGAGGCGATGCGGAGGGAGGGGTTCAAGCCGGACGCCGTGACGTTCACCGGCGTGCTCACGGCGTGCAGCCACGGCGGCCTCACCGACGAGGGGCTAAGATACTACGACCTGATGAGGGCGGAGTACGGCATCGCGGCGCGGATGGAGCACTACGGCTGCGTGGTCGACCTGCTCGGCCGGTCGGGGCAGCTCGAGGAGGCGATGCGGGTGGTGACCACCATGCCGATGCGGCCAAACGAGGTGGTGCTCGGCGCCCTCCTCGCCGGCTGCCGG]

[+] EMBL AK073145             [GCAAAGGCTCCGTGCCAACGTGCCCGCGGGGAAATGCCTCAGCCCTCAGCCATAGACCTTACCTCATGGCCGTCGTAGCCCCTCCTTCCCTTGCCCTTCCCCAACCTCCTCAGAACCCAACCCCTAAACCTCGCCGCTGCGCTCTCCGCCATGCTCTCCTCCCCCGCGGCGCCCGTCCCCAACGACGTCACCCTTCTCACCGTCCTCTCCGCCTGCGCCGACTCCCCGTCCTCCCCGCTCGCCCGCCGCCTCGCGCTCTCCGTCCACGCCCGCGTGCTCAAGCTCTTCCCCTCCCACCTCCTCCTCTCCACCTGCCTCGTGCGCTTCTACTTCGCGTCCCGCTTGCCCCACCTCGCCCTCCAGCTGTTCGACGCCATGCCCGTGAGGTCCGCCGTCACCTACAACACGGTGATCTCCGGCCTCATGCGGAACGGCCTCGTCGCCGCCGCGTTCGAGGTGTTCGACGGAATGCCGGCGCCGGATAAGGTCTCCTGGACGGCTCTCATCGACGGGTGCGTCAAGAACGGGCGCCACGACGAGGCCATCGACTGCTTCCGCGCCATGCTTCTGGACGGTGTCGAGCCGGACTACGTCACGCTGATAGCCGTCATCTCCGCGTGCGCCGAGGTCGGCGCGCTGGGGCTCGGGATGTGGGTGCACCGGCTCGTGGTCCGGCAGGGGCTGGAGCGCAACGTCAGGATAGCCAACTCGCTCATCGACATGTACGCGCGGTGCGGGCAGGTGGAGCTCGCGCGGCAGGTGTTCAGCGGAATGAGGAAGCGGACGGTGGTCTCCTGGAACTCGATGATCGTTGGGTTCGCCGCCAACGGCCGGTGCGCGGACGCCGTCGAGCACTTCGAGGCGATGCGGAGGGAGGGGTTCAAGCCGGACGCCGTGACGTTCACCGGCGTGCTCACGGCGTGCAGCCACGGCGGCCTCACCGACGAGGGGCTAAGATACTACGACCTGATGAGGGCGGAGTACGGCATCGCGGCGCGGATGGAGCACTACGGCTGCGTGGTCGACCTGCTCGGCCGGTCGGGGCAGCTCGAGGAGGCGATGCGGGTGGTGACCACCATGCCGATGCGGCCAAACGAGGTGGTGCTCGGCGCCCTCCTCGCCGGCTGCCGG]




>consensus_9849#1
GCAAAGGCTCCGTGCCAACGTGCCCGCGGGGAAATGCCTCAGCCCTCAGCCATAGACCTT
ACCTCATGGCCGTCGTAGCCCCTCCTTCCCTTGCCCTTCCCCAACCTCCTCAGAACCCAA
CCCCTAAACCTCGCCGCTGCGCTCTCCGCCATGCTCTCCTCCCCCGCGGCGCCCGTCCCC
AACGACGTCACCCTTCTCACCGTCCTCTCCGCCTGCGCCGACTCCCCGTCCTCCCCGCTC
GCCCGCCGCCTCGCGCTCTCCGTCCACGCCCGCGTGCTCAAGCTCTTCCCCTCCCACCTC
CTCCTCTCCACCTGCCTCGTGCGCTTCTACTTCGCGTCCCGCTTGCCCCACCTCGCCCTC
CAGCTGTTCGACGCCATGCCCGTGAGGTCCGCCGTCACCTACAACACGGTGATCTCCGGC
CTCATGCGGAACGGCCTCGTCGCCGCCGCGTTCGAGGTGTTCGACGGAATGCCGGCGCCG
GATAAGGTCTCCTGGACGGCTCTCATCGACGGGTGCGTCAAGAACGGGCGCCACGACGAG
GCCATCGACTGCTTCCGCGCCATGCTTCTGGACGGTGTCGAGCCGGACTACGTCACGCTG
ATAGCCGTCATCTCCGCGTGCGCCGAGGTCGGCGCGCTGGGGCTCGGGATGTGGGTGCAC
CGGCTCGTGGTCCGGCAGGGGCTGGAGCGCAACGTCAGGATAGCCAACTCGCTCATCGAC
ATGTACGCGCGGTGCGGGCAGGTGGAGCTCGCGCGGCAGGTGTTCAGCGGAATGAGGAAG
CGGACGGTGGTCTCCTGGAACTCGATGATCGTTGGGTTCGCCGCCAACGGCCGGTGCGCG
GACGCCGTCGAGCACTTCGAGGCGATGCGGAGGGAGGGGTTCAAGCCGGACGCCGTGACG
TTCACCGGCGTGCTCACGGCGTGCAGCCACGGCGGCCTCACCGACGAGGGGCTAAGATAC
TACGACCTGATGAGGGCGGAGTACGGCATCGCGGCGCGGATGGAGCACTACGGCTGCGTG
GTCGACCTGCTCGGCCGGTCGGGGCAGCTCGAGGAGGCGATGCGGGTGGTGACCACCATG
CCGATGCGGCCAAACGAGGTGGTGCTCGGCGCCCTCCTCGCCGGCTGCCGG

consensusID : consensus_9849#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 216
fasta sequence

                              [GCCGGAGNGGGNGGTNATGGGAATGCGGCGAGGGTGGGGGAGGTGGGAGGGGAGGGGGATNGAGCCGGAGAGGCGGACGCTGGGGCGGCGCTGGCGCTTGCCGTCTTCCTCGNNCTGGGGCTCGGNATGTGGGTGCACCGGCTCGTGGTCCGGCAGGGNCTGGAGCNCAACGTCAGGATAGCCAACTCGNTCATCGACATNTACGCNCGGTGCGGN]

[+] EMBL OSC09251             [GCCGGAGNGGGNGGTNATGGGAATGCGGCGAGGGTGGGGGAGGTGGGAGGGGAGGGGGATNGAGCCGGAGAGGCGGACGCTGGGGCGGCGCTGGCGCTTGCCGTCTTCCTCGNNCTGGGGCTCGGNATGTGGGTGCACCGGCTCGTGGTCCGGCAGGGNCTGGAGCNCAACGTCAGGATAGCCAACTCGNTCATCGACATNTACGCNCGGTGCGGN]




>consensus_9849#2
GCCGGAGNGGGNGGTNATGGGAATGCGGCGAGGGTGGGGGAGGTGGGAGGGGAGGGGGAT
NGAGCCGGAGAGGCGGACGCTGGGGCGGCGCTGGCGCTTGCCGTCTTCCTCGNNCTGGGG
CTCGGNATGTGGGTGCACCGGCTCGTGGTCCGGCAGGGNCTGGAGCNCAACGTCAGGATA
GCCAACTCGNTCATCGACATNTACGCNCGGTGCGGN

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9849#0      GATGCTAATGAAACCAGGATAAAAGGGGATGAATTCTGAAGAAAACCTGAAGAAACCAGG 60
consensus_9849#1      ------------------------------------------------------------
consensus_9849#2      ------------------------------------------------------------
                                                                                  

consensus_9849#0      GGAGAGCAAAGGCTCCGTGCCAACGTGCCCGCGGGGAAATGCCTCAGCCCTCAGCCATAG 120
consensus_9849#1      -----GCAAAGGCTCCGTGCCAACGTGCCCGCGGGGAAATGCCTCAGCCCTCAGCCATAG 55
consensus_9849#2      ------------------------------------------------------------
                                                                                  

consensus_9849#0      ACCTTACCTCATGGCCGTCGTAGCCCCTCCTTCCCTTGCCCTTCCCCAACCTCCTCAGAA 180
consensus_9849#1      ACCTTACCTCATGGCCGTCGTAGCCCCTCCTTCCCTTGCCCTTCCCCAACCTCCTCAGAA 115
consensus_9849#2      ------------------------------------------------------------
                                                                                  

consensus_9849#0      CCCAACCCCTAAACCTCGCCGCCGGCCGCCGCGAGACGTCGCCTCATGGACGTCCGCCAT 240
consensus_9849#1      CCCAACCCCTAAACCTCGCCGC-------------------------------------- 137
consensus_9849#2      ------------------------------------------------------------
                                                                                  

consensus_9849#0      CGCGCGCCCGGCGAAGCAGGGCGACCTCCCCGCGGCGGCCGCTGCGCTCTCCGCCATGCT 300
consensus_9849#1      ------------------------------------------TGCGCTCTCCGCCATGCT 155
consensus_9849#2      ------------------------------------------------------------
                                                                                  

consensus_9849#0      CTCCTCCCCCGCGGCGCCCGTCCCCAACGACGTCACCCTTCTCACCGTCCTCTCCGCCTG 360
consensus_9849#1      CTCCTCCCCCGCGGCGCCCGTCCCCAACGACGTCACCCTTCTCACCGTCCTCTCCGCCTG 215
consensus_9849#2      ------------------------------------------------------------
                                                                                  

consensus_9849#0      CGCCGACTCCCCGTCCTCCCCGCTCGCCCGCCGCCTCGCGCTCTCCGTCCACGCCCGCGT 420
consensus_9849#1      CGCCGACTCCCCGTCCTCCCCGCTCGCCCGCCGCCTCGCGCTCTCCGTCCACGCCCGCGT 275
consensus_9849#2      ------------------------------------------------------------
                                                                                  

consensus_9849#0      GCTCAAGCTCTTCCCCTCCCACCTCCTCCTCTCCACCTGCCTCGTGCGCTTCTACTTCGC 480
consensus_9849#1      GCTCAAGCTCTTCCCCTCCCACCTCCTCCTCTCCACCTGCCTCGTGCGCTTCTACTTCGC 335
consensus_9849#2      ------------------------------------------------------------
                                                                                  

consensus_9849#0      GTCCCGCTTGCCCCACCTCGCCCTCCAGCTGTTCGACGCCATGCCCGTGAGGTCCGCCGT 540
consensus_9849#1      GTCCCGCTTGCCCCACCTCGCCCTCCAGCTGTTCGACGCCATGCCCGTGAGGTCCGCCGT 395
consensus_9849#2      ------------------------------------------------------------
                                                                                  

consensus_9849#0      CACCTACAACACGGTGATCTCCGGCCTCATGCGGAACGGCCTCGTCGCCGCCGCGTTCGA 600
consensus_9849#1      CACCTACAACACGGTGATCTCCGGCCTCATGCGGAACGGCCTCGTCGCCGCCGCGTTCGA 455
consensus_9849#2      ------------------------------------------------------------
                                                                                  

consensus_9849#0      GGTGTTCGACGGAATGCCGGCGCCGGATAAGGTCTCCTGGACGGCTCTCATCGACGGGTG 660
consensus_9849#1      GGTGTTCGACGGAATGCCGGCGCCGGATAAGGTCTCCTGGACGGCTCTCATCGACGGGTG 515
consensus_9849#2      ------------------------------------------------------------
                                                                                  

consensus_9849#0      CGTCAAGAACGGGCGCCACGACGAGGCCATCGACTGCTTCCGCGCCATGCTTCTGGACGG 720
consensus_9849#1      CGTCAAGAACGGGCGCCACGACGAGGCCATCGACTGCTTCCGCGCCATGCTTCTGGACGG 575
consensus_9849#2      -GCCGGAGNGGGNGGTNATGGGAATGCGG-CGA--GGGTGGGGGAGGTGGGAGGGGAGGG 56
                       * *      **  *  * *   * **   ***  *  *  * *   **     *** **

consensus_9849#0      TG-TCGAGCCGGACTACGTCACGCTGATAGCCGTCATCTCCGCGTGCGCCGAGGTCGGCG 779
consensus_9849#1      TG-TCGAGCCGGACTACGTCACGCTGATAGCCGTCATCTCCGCGTGCGCCGAGGTCGGCG 634
consensus_9849#2      GGATNGAGCCGGAGAGGCGGACGCTG--GGGCGGCGCT--GGCGCTTGCCGTCTTCCTCG 112
                       * * ********       ******   * ** *      ***   ****   **  **

consensus_9849#0      CGCTGGGGCTCGGGATGTGGGTGCACCGGCTCGTGGTCCGGCAGGGGCTGGAGCGCAACG 839
consensus_9849#1      CGCTGGGGCTCGGGATGTGGGTGCACCGGCTCGTGGTCCGGCAGGGGCTGGAGCGCAACG 694
consensus_9849#2      NNCTGGGGCTCGGNATGTGGGTGCACCGGCTCGTGGTCCGGCAGGGNCTGGAGCNCAACG 172
                        *********** ******************************** ******* *****

consensus_9849#0      TCAGGATAGCCAACTCGCTCATCGACATGTACGCGCGGTGCGGGCAGGTGGAGCTCGCGC 899
consensus_9849#1      TCAGGATAGCCAACTCGCTCATCGACATGTACGCGCGGTGCGGGCAGGTGGAGCTCGCGC 754
consensus_9849#2      TCAGGATAGCCAACTCGNTCATCGACATNTACGCNCGGTGCGGN---------------- 216
                      ***************** ********** ***** ********                 

consensus_9849#0      GGCAGGTGTTCAGCGGAATGAGGAAGCGGACGGTGGTCTCCTGGAACTCGATGATCGTTG 959
consensus_9849#1      GGCAGGTGTTCAGCGGAATGAGGAAGCGGACGGTGGTCTCCTGGAACTCGATGATCGTTG 814
consensus_9849#2      ------------------------------------------------------------
                                                                                  

consensus_9849#0      GGTTCGCCGCCAACGGCCGGTGCGCGGACGCCGTCGAGCACTTCGAGGCGATGCGGAGGG 1019
consensus_9849#1      GGTTCGCCGCCAACGGCCGGTGCGCGGACGCCGTCGAGCACTTCGAGGCGATGCGGAGGG 874
consensus_9849#2      ------------------------------------------------------------
                                                                                  

consensus_9849#0      AGGGGTTCAAGCCGGACGCCGTGACGTTCACCGGTGTGCTCACGGCGTGCAGCCACGGCG 1079
consensus_9849#1      AGGGGTTCAAGCCGGACGCCGTGACGTTCACCGGCGTGCTCACGGCGTGCAGCCACGGCG 934
consensus_9849#2      ------------------------------------------------------------
                                                                                  

consensus_9849#0      GCCTCACCGACGAGGGGCTAAGATACTACGACCTGATGAGGGCGGAGTACGGCATCGCGG 1139
consensus_9849#1      GCCTCACCGACGAGGGGCTAAGATACTACGACCTGATGAGGGCGGAGTACGGCATCGCGG 994
consensus_9849#2      ------------------------------------------------------------
                                                                                  

consensus_9849#0      CGCGGATGGAGCACTACGGCTGCGTGGTCGACCTGCTCGGCCGGTCGGGGCAGCTCGAGG 1199
consensus_9849#1      CGCGGATGGAGCACTACGGCTGCGTGGTCGACCTGCTCGGCCGGTCGGGGCAGCTCGAGG 1054
consensus_9849#2      ------------------------------------------------------------
                                                                                  

consensus_9849#0      AGGCGATGCGGGTGGTGACCACCATGCCGATGCGGCCAAACGAGGTGGTGCTCGGCGCCC 1259
consensus_9849#1      AGGCGATGCGGGTGGTGACCACCATGCCGATGCGGCCAAACGAGGTGGTGCTCGGCGCCC 1114
consensus_9849#2      ------------------------------------------------------------
                                                                                  

consensus_9849#0      TCCTCGCCGGCTGCCGGA 1277
consensus_9849#1      TCCTCGCCGGCTGCCGG- 1131
consensus_9849#2      ------------------