These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9858#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2148 fasta sequence [CTCGCCGTCAAATCTCCCCTCTTTCTCGCCGCCGGCGAGCAGCAGAAGCAGCGGCACCAGCACCACCGGCTGTAGGCGCGATCTTGTAGGCTCATCGGAGATGGGGAAGAAGCAGCATAGCAAGGACCGGATGTTCATAACGCGGACGGAGTGGGCGACGGAGTGGGGCGGCGCCAAGCAGAAGGAGGCCGGCACGCCCTTCAAGCGCCTTCCCTTCTACTGCTGCGCGCTTACGTTTTTACCATTTGAGGATCCAGTGTGCACAGCAGATGGAAGCGTCTTTGATTTGATGAGCATAATTCCATACATTAAGAAGTTCGGGAAGCACCCAGTAACAGGAACACCACTCAAGCAGGAAGATCTAATGCCTTTAACATTCCACAAGAACTCAGATGGAGAGTTCCAGTGCCCTGTTTTGAATAAAGTTTTTACAGAATTCACGCATATAGTTGCTGTAAAGACTACTGGGAACGTCTTCTGTTATGAGGTGGGGTTTGGCAATCCAAGAACTCAACATCAAGCCAAAGAATTGGAGAGAATTGCTAACTGATGAGCCCTTTACACGAAATGACTTGATAACAATTCAGAATCCAAATGCGGTTGATAGCAAGATCCTAGGTGAATTTGACCATGTCAAGAAAGGCCTCAAACTTGAAGATGAAGAGTTGCAACGAATGAAAAATGATCCAACCTACAACATAAATATTTCTGGTGATCTTAAGCAAATGATTAAGGAACTTGGAACTGAAAAGGGAAAGTTAGCTTTTTTGCATGGTGGGGGAGGGCAGAAAGCTCAAAAGGAAAGAGCTGCTGCACTTGCTGCTATATTGGCAAAAAAGGAGAAGGATGACTCAAAATCTGGCAAAGAACCTAAACCTCATCAGCCTTTCAGTATTGTAGATGCTGCTTCTGCTTCTGTTCATGGCAGAAGTGCAGCCGCAGCAAAGGCTGCTACTGCTGAGAAAACAGCTGCTAGAATAGCAATGCACATGGCAGGAGATCGAGCTCCTGTAAATGCTAAACTGGTTAAAAGCAGTTACACCACAGGAGCAGCTTCACGTTCTTTCACATCAACTGCCTATGATCCTGTCACCAAAAATGAACTTGAGTATGTTAAGGTTGAAAAGAATCCAAAAAAGAAGGGATATGTTCAGTTGCATACCACCCATGGTGATTTGAATTTGGAGCTTCATTGTGATATAACACCTCGGACATGTGAAAATTTCCTCACACATTGTGAAAATGGTTACTATAATGGTCTTATCTTCCATCGTAGTATCAAAAATTTCATGATTCAAGGAGGTGATCCAACTGGCACAGGAAGTGGAGGGGAGTCCATATGGGGTAAACCTTTCAAGGATGAACTGAATTCAAAACTTATACATTCAGGAAGAGGTGTTGTCAGCATGGCTAATTCTGGGCCTCATACCAATGGGTCCCAATTTTTCATCTTGTACAAGTCCGCACCACATTTAAATTTCAAGCATACGGTATTTGGCATGGTGGTCGGTGGCTTGACCACTCTTTCGGCTATGGAAAAGGTTCCTGTTGATGATGACGATCGACCATTGGAGGAAATAAAGATATTAAAAGTAAGTGTATTTGTGAACCCTTACACGGAACCAGATGAAGAAGAAGAAGAAAAGGCAAAGGAAGAGGAGAAGAAAAAGGATGAGGATTATGATAAGGTGGGATCATGGTATAGCAATCCAGGCACTGGCGTTGCTGGTTCAACTAGCTCTGGTGGTGGCGTTGGCAAGTACCTAAAAGCTCGGACAGCTGGCTTTGCTGATGTGGTTGCAGATGATTCAAACAAGAAAAGAAAAGCGAGTGTGTCTAATGTAGAATTTAAGGATTTCTCTGGGTGGTAGATTCCTGATGAACCTCCCCTTCTCTCAGAAGAAATGGCTAGTGGAAACTTCGGTAGCAGCACTGTGGCATTTCTTCAATCTTCTGCTATGGATTTAAACTAAGATGCTCAAGGTCCACAATTAAGATTCTCTGTAAGCAGATCCGAGTTGAGTAACATGATCCACTCTGGGTGGGTGTTTTGCGGCAAAAGAGTTGCACACTGAGCTATAAGAGGGATGCTTGGGACTTAGGAAATTTGACTGGTTCAATAACTGGAAATTCATGCTTCCATCAGTC] [+] EMBL AK102337 [CTCGCCGTCAAATCTCCCCTCTTTCTCGCCGCCGGCGAGCAGCAGAAGCAGCGGCACCAGCACCACCGGCTGTAGGCGCGATCTTGTAGGCTCATCGGAGATGGGGAAGAAGCAGCATAGCAAGGACCGGATGTTCATAACGCGGACGGAGTGGGCGACGGAGTGGGGCGGCGCCAAGCAGAAGGAGGCCGGCACGCCCTTCAAGCGCCTTCCCTTCTACTGCTGCGCGCTTACGTTTTTACCATTTGAGGATCCAGTGTGCACAGCAGATGGAAGCGTCTTTGATTTGATGAGCATAATTCCATACATTAAGAAGTTCGGGAAGCACCCAGTAACAGGAACACCACTCAAGCAGGAAGATCTAATGCCTTTAACATTCCACAAGAACTCAGATGGAGAGTTCCAGTGCCCTGTTTTGAATAAAGTTTTTACAGAATTCACGCATATAGTTGCTGTAAAGACTACTGGGAACGTCTTCTGTTATGAGGTGGGGTTTGGCAATCCAAGAACTCAACATCAAGCCAAAGAATTGGAGAGAATTGCTAACTGATGAGCCCTTTACACGAAATGACTTGATAACAATTCAGAATCCAAATGCGGTTGATAGCAAGATCCTAGGTGAATTTGACCATGTCAAGAAAGGCCTCAAACTTGAAGATGAAGAGTTGCAACGAATGAAAAATGATCCAACCTACAACATAAATATTTCTGGTGATCTTAAGCAAATGATTAAGGAACTTGGAACTGAAAAGGGAAAGTTAGCTTTTTTGCATGGTGGGGGAGGGCAGAAAGCTCAAAAGGAAAGAGCTGCTGCACTTGCTGCTATATTGGCAAAAAAGGAGAAGGATGACTCAAAATCTGGCAAAGAACCTAAACCTCATCAGCCTTTCAGTATTGTAGATGCTGCTTCTGCTTCTGTTCATGGCAGAAGTGCAGCCGCAGCAAAGGCTGCTACTGCTGAGAAAACAGCTGCTAGAATAGCAATGCACATGGCAGGAGATCGAGCTCCTGTAAATGCTAAACTGGTTAAAAGCAGTTACACCACAGGAGCAGCTTCACGTTCTTTCACATCAACTGCCTATGATCCTGTCACCAAAAATGAACTTGAGTATGTTAAGGTTGAAAAGAATCCAAAAAAGAAGGGATATGTTCAGTTGCATACCACCCATGGTGATTTGAATTTGGAGCTTCATTGTGATATAACACCTCGGACATGTGAAAATTTCCTCACACATTGTGAAAATGGTTACTATAATGGTCTTATCTTCCATCGTAGTATCAAAAATTTCATGATTCAAGGAGGTGATCCAACTGGCACAGGAAGTGGAGGGGAGTCCATATGGGGTAAACCTTTCAAGGATGAACTGAATTCAAAACTTATACATTCAGGAAGAGGTGTTGTCAGCATGGCTAATTCTGGGCCTCATACCAATGGGTCCCAATTTTTCATCTTGTACAAGTCCGCACCACATTTAAATTTCAAGCATACGGTATTTGGCATGGTGGTCGGTGGCTTGACCACTCTTTCGGCTATGGAAAAGGTTCCTGTTGATGATGACGATCGACCATTGGAGGAAATAAAGATATTAAAAGTAAGTGTATTTGTGAACCCTTACACGGAACCAGATGAAGAAGAAGAAGAAAAGGCAAAGGAAGAGGAGAAGAAAAAGGATGAGGATTATGATAAGGTGGGATCATGGTATAGCAATCCAGGCACTGGCGTTGCTGGTTCAACTAGCTCTGGTGGTGGCGTTGGCAAGTACCTAAAAGCTCGGACAGCTGGCTTTGCTGATGTGGTTGCAGATGATTCAAACAAGAAAAGAAAAGCGAGTGTGTCTAATGTAGAATTTAAGGATTTCTCTGGGTGGTAGATTCCTGATGAACCTCCCCTTCTCTCAGAAGAAATGGCTAGTGGAAACTTCGGTAGCAGCACTGTGGCATTTCTTCAATCTTCTGCTATGGATTTAAACTAAGATGCTCAAGGTCCACAATTAAGATTCTCTGTAAGCAGATCCGAGTTGAGTAACATGATCCACTCTGGGTGGGTGTTTTGCGGCAAAAGAGTTGCACACTGAGCTATAAGAGGGATGCTTGGGACTTAGGAAATTTGACTGGTTCAATAACTGGAAATTCATGCTTCCATCAGT ] [+] EMBL AU181990 [ TTGAGTATGTTAAGGTTGAAAAGAATCCAAAAAAGAAGGGATATGTTCAGTTGCATACCACCCATGGTGATTTGAATTTGGAGCTTCATTGTGATATAACACCTCGGACATGTGAAAATTTCCTCACACATTGTGAAAATGGTTACTATAATGGTCTTATCTTCCATCGTAGTATCAAAAATTTCATGATTCAAGGAGGTGATCCAACTGGCACAGGAAGTGGAGGGGAGTCCATATGGGGTAAACCTTTCAAGGATGAACTGAATTCAAAACTTATACATTCAGGAAGAGGTGTTGTCAGCATGGCTAATTCTGGGCCTCATACCAATGGGTCCCAATTTTTCATCTTGGACAAGTCCGCACCACATTTAAATTTCAAGCATACGGTATTTGGCATGGTGGTCGGTGGCTTGACCACTCTTTCGGCTATGGAAAA ] [-] EMBL CB632247 [ TATTTGTGAACCCTTACACGGAACCAGATGAAGAAGAAGAAGAAAAGGCAAAGGAAGAGGAGAAGAAAAAGGATGAGGATTATGATAAGGTGGGATCATGGTATAGCAATCCAGGCACTGGCGTTGCTGGTTCAACTAGCTCTGGTGGTGGCGTTGGCAAGTACCTAAAAGCTCGGACAGCTGGCTTTGCTGATGTGGTTGCAGATGATTCAAACAAGAAAAGAAAAGCGAGTGTGTCTAATGTAGAATTTAAGGATTTCTCTGGGTGGTAGATTCCTGATGAACCTCCCCTTCTCTCAGAAGAAATGGCTAGTGGAAACTTCGGTAGCAGCACTGTGGCATTTCTTCAATCTTCTGCTATGGATTTAAACTAAGATGCTCAAGGTCCACAATTGAGATTCTCTGTAAGCAGATCCGAGTTGAGTAACATGATCCACTCTGGGTGGGTGTTTTGCGGCAAAAGAGTTGCACACTGAGCTATAAGAGGGATGCTTGGGACTTAGGAAATTTGACTGGTTCAATAACTGGAAATTCATGCTTCCATCAGTC] consensusID : consensus_9858#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 887 fasta sequence [CTAATTCTGGGCCTCATACCAACGGGTCCCAATTTTTCATCTTGTACAAGTCCGCACCACATTTAAATTTCAAGCATACGGTATTTGGCATGGTGGTCGGTGGCTTGACCACTCTTTCGGCTATGGAAAAGGTTCCTGTTGATGATGACGATCGACCATTGGAGGAAATAAAGATATTAAAAGTAAGTGTATTTGTGAACCCTTACACGGAACCAGATGAAGAAGAAGAAGAAAAGGCAAAGGAAGAGGAGAAGAAAAAGGATGAGGATTATGATAAGGTGGGATCATGGTATAGCAATCCAGGCACTGGCGTTGCTGGTTCAACTAGCTCTGGTGGTGGCGTTGGCAATTACCTAAAAGCTCGGACAGCTGGCTTTGCTGATGTGGTTGCACATGATTCAAACAAGAAAAGAAAAGCGAGTGTGTCTAATGTTCAACTCAAGGATCTCTCTGGGTGGCACATCCCTGATGCACCTCCCCTCCTCTCACCATAAATGCTTAGCGGAAACATCTGCTGCCACCCTGTGGCTCTTCCCTCACCCCTCGCCTCGCCTCCAACCTCACATGCCCCAGCCTTACAATTCCCATTTCCTGTTTTCCCTCCTCCGTTTCTTTCCACGACCCCCCCCAGAAAGACCGCTCTTCCGCCTCCTCCGTTATTCTCCCCATGTTTCCCCTCTTTTCGTCCCGCTATTTTCTCTTTTTTTCCCTGTCCGCTATTGTTATCACGTCAGTCCCTCCTCACTTCCCTTTTCTACACCCCCTTTACCATATTCTCTTATGCCCTCTTTGTCAGGACCCGTTTCCCCCCCCGCAGTGTTTCATCATTTTCCGGCTTCGTTCTTCCTTACCGCCTCTCTGTCCGTTCTTCTTTTCTCCTCCCTCCC] [+] EMBL CA757822 [CTAATTCTGGGCCTCATACCAACGGGTCCCAATTTTTCATCTTGTACAAGTCCGCACCACATTTAAATTTCAAGCATACGGTATTTGGCATGGTGGTCGGTGGCTTGACCACTCTTTCGGCTATGGAAAAGGTTCCTGTTGATGATGACGATCGACCATTGGAGGAAATAAAGATATTAAAAGTAAGTGTATTTGTGAACCCTTACACGGAACCAGATGAAGAAGAAGAAGAAAAGGCAAAGGAAGAGGAGAAGAAAAAGGATGAGGATTATGATAAGGTGGGATCATGGTATAGCAATCCAGGCACTGGCGTTGCTGGTTCAACTAGCTCTGGTGGTGGCGTTGGCAATTACCTAAAAGCTCGGACAGCTGGCTTTGCTGATGTGGTTGCACATGATTCAAACAAGAAAAGAAAAGCGAGTGTGTCTAATGTTCAACTCAAGGATCTCTCTGGGTGGCACATCCCTGATGCACCTCCCCTCCTCTCACCATAAATGCTTAGCGGAAACATCTGCTGCCACCCTGTGGCTCTTCCCTCACCCCTCGCCTCGCCTCCAACCTCACATGCCCCAGCCTTACAATTCCCATTTCCTGTTTTCCCTCCTCCGTTTCTTTCCACGACCCCCCCCAGAAAGACCGCTCTTCCGCCTCCTCCGTTATTCTCCCCATGTTTCCCCTCTTTTCGTCCCGCTATTTTCTCTTTTTTTCCCTGTCCGCTATTGTTATCACGTCAGTCCCTCCTCACTTCCCTTTTCTACACCCCCTTTACCATATTCTCTTATGCCCTCTTTGTCAGGACCCGTTTCCCCCCCCGCAGTGTTTCATCATTTTCCGGCTTCGTTCTTCCTTACCGCCTCTCTGTCCGTTCTTCTTTTCTCCTCCCTCCC] consensusID : consensus_9858#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 853 fasta sequence [GCTTCTTCTTCCTTCTCTCTCCCCGACCAATCCGACCCAAACGCTCCTCGCCGTCAAATCTCCCCTCTTTCTCGCCGCCGGCGAGCAGCAGAAGCAGCGGCACCAGCACCACCGGCTGTAGGCGCTATCTTGTAGGCTCATCGGAGATGGGGAAGAAGCAGCATAGCAAGGACCGGATGATCATAACGCGGACGGAGTGGGCGACGGAGTGGGGCGGCGCCAAGCAGAAGGAGGCCGGCACGCCCTTCAAGCGCCTTCCCTTCTACTGCTGCGCGCTTACGTTTTTACCATTTGAGGATCCAGTGTGCACAGCAGATGGAAGCGTCTTTGATTTGATGAGCATAATTCCATACATTAAGAAGTTCGGGAAGCACCCAGTAACAGGAACACCACTCAAGCAGGAAGATCTAATGCCTTTAACATTCCACAAGAACTCAGATGGAGAGTTCCAGTGCCCTGTTTTGAATAAAGTTTTTACAGAATTCACGCATATAGTTGCTGTAAAGACTACTGGGAACGTCTTCTGTTATGAGGCAATCCAAGAACTCAACATCAAGCCAAAGAATTGGAGAGAATTGCTAACTGATGAGCCCTTTACACGAAATGACTTGATAACAATTCAGAATCCAAATGCGGTTGATAGCAAGATCCTAGGTGAATTTGACCATGTCAAGAAAGGCCTCAAACTTGAAGATGAAGAGTTGCAACGAATGATAAATGATCCAACCTACAACATAAATATTTCTGGTGATCTTAAGCAAATGATTAAGGAACTTGGAACTGAAAAGGGGAAGTTAGCTTTTTTGCATGGTGGGGGAGGGCAGAAAGCTCAAAAGGAAAGAGCTGCTGCACT] [+] EMBL CB632246 [GCTTCTTCTTCCTTCTCTCTCCCCGACCAATCCGACCCAAACGCTCCTCGCCGTCAAATCTCCCCTCTTTCTCGCCGCCGGCGAGCAGCAGAAGCAGCGGCACCAGCACCACCGGCTGTAGGCGCTATCTTGTAGGCTCATCGGAGATGGGGAAGAAGCAGCATAGCAAGGACCGGATGATCATAACGCGGACGGAGTGGGCGACGGAGTGGGGCGGCGCCAAGCAGAAGGAGGCCGGCACGCCCTTCAAGCGCCTTCCCTTCTACTGCTGCGCGCTTACGTTTTTACCATTTGAGGATCCAGTGTGCACAGCAGATGGAAGCGTCTTTGATTTGATGAGCATAATTCCATACATTAAGAAGTTCGGGAAGCACCCAGTAACAGGAACACCACTCAAGCAGGAAGATCTAATGCCTTTAACATTCCACAAGAACTCAGATGGAGAGTTCCAGTGCCCTGTTTTGAATAAAGTTTTTACAGAATTCACGCATATAGTTGCTGTAAAGACTACTGGGAACGTCTTCTGTTATGAGGCAATCCAAGAACTCAACATCAAGCCAAAGAATTGGAGAGAATTGCTAACTGATGAGCCCTTTACACGAAATGACTTGATAACAATTCAGAATCCAAATGCGGTTGATAGCAAGATCCTAGGTGAATTTGACCATGTCAAGAAAGGCCTCAAACTTGAAGATGAAGAGTTGCAACGAATGATAAATGATCCAACCTACAACATAAATATTTCTGGTGATCTTAAGCAAATGATTAAGGAACTTGGAACTGAAAAGGGGAAGTT ] [+] EMBL CB629580 [ CCTCCTTTTCGCCGCCGGCGAGCAGCAGAAGCAGCGGCACCAGCACCACCGGCTGTAGGCGCTATCTTGTAGGCTCATCCGAGATGGGGAAGAAGCAGCATAGCAAGGACCGGATGTTCATAACGCGGACGGAGTGGGCGACGGAGTGGGGCGGCGCCAAGCAGAAGGAGGCCGGCACGCCCTTCAAGCGCCTTCCCTTCTACTGCTGCGCGCTTACGTTTTTACCATTTGAGGATCCAGTGTGCACAGCAGATGGAAGCGTCTTTGATTTGATGAGCATAATTCCATACATTAAGAAGTTCGGGAAGCACCCAGTAACAGGAACACCACTCAAGCAGGAAGATCTAATGCCTTTAACATTCCACAAGAACTCAGATGGAGAGTTCCAGTGCCCTGTTTTGAATAAAGTTTTTACAGAATTCACGCATATAGTTGCTGTAAAGACTACTGGGAACGTCTTCTGTTATGAGGCAATCCAAGAACTCAACATCAAGCCAAAGAATTGGAGAGAATTGCTAACTGATGAGCCCTTTACACGAAATGACTTGATAACAATTCAGAATCCAAATGCGGTTGATAGCAAGATCCTAGGTGAATTTGACCATGTCAAGAAAGGCCTCAAACTTGAAGATGAAGAGTTGCAACGAATGAAAAATGATCCAACCTACAACATAAATATTTCTGGTGATCTTAAGCAAATGATTAAAGAACTTGGAACTGAAAAGGGAAAGTTAGCTTTTTTGCATGGTGGGGGAGGGCAGAAAGCTCAAAAGGAAAGAGCTGCTGCACT] consensusID : consensus_9858#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 751 fasta sequence [CCTGTTGATGATGACGATCGACCATTGGAGGAAATAAAGATATTAAAAGTAAGTGTATTTGTGAACCCTTACACGGAACCAGATGAAGAAGAAGAAGAAAAGGCAAAGGAAGAGGAGAAGAAAAAGGATGAGGATTATGATAAGGTGGGATCATGGTATAGCAATCCAGGCACTGGCGTTGCTGGTTCAACTAGCTCTGGTGGTGGCGTTGGCAAGTACCTAAAAGCTCGGACAGCTGGCTTTGCTGATGTGGTTGCAGATGATTCAAACAAGAAAAGAAAAGCGAGTGTGTCTAATGTAGAATTTAAGGATTTCTCTGGGTGGTAGATTCCTGATGAACCTCCCCTTCTCTCAGAAGAAATGGCTAGTGGAAACTTCGGTAGCAGCACTGTGGCATTTCTTCAATCTTCTGCTATGGATTTAAACTAAGATGCTCAAGGTCCACAATTGAGATTCTCTGTAAGCAGATCCGAGTTGAGTAACATGATCCACTCTGGGTGGGTGTTTTGCGGCAAAAGGTATTACTAGATTCTTCTACTGTAAACTTATGTTGTGTCTTGTATAAATCAAAGCCATGTTGTTAGCGGTTTCTTTTATACAACAACAGACTTCCCAAGCAAGTTGGTGTAAGCTAGAAATGGAACTTCAATTCTAAGCCTTTAGCGTTTCTTATGTTAGAGCAAGAGTCAACCCTGATGAAAGTAATGTGCATTTGACTGTCAGAAAGTATTTGTCGTGACTATGAAAAGAG] [-] EMBL CB629581 [CCTGTTGATGATGACGATCGACCATTGGAGGAAATAAAGATATTAAAAGTAAGTGTATTTGTGAACCCTTACACGGAACCAGATGAAGAAGAAGAAGAAAAGGCAAAGGAAGAGGAGAAGAAAAAGGATGAGGATTATGATAAGGTGGGATCATGGTATAGCAATCCAGGCACTGGCGTTGCTGGTTCAACTAGCTCTGGTGGTGGCGTTGGCAAGTACCTAAAAGCTCGGACAGCTGGCTTTGCTGATGTGGTTGCAGATGATTCAAACAAGAAAAGAAAAGCGAGTGTGTCTAATGTAGAATTTAAGGATTTCTCTGGGTGGTAGATTCCTGATGAACCTCCCCTTCTCTCAGAAGAAATGGCTAGTGGAAACTTCGGTAGCAGCACTGTGGCATTTCTTCAATCTTCTGCTATGGATTTAAACTAAGATGCTCAAGGTCCACAATTGAGATTCTCTGTAAGCAGATCCGAGTTGAGTAACATGATCCACTCTGGGTGGGTGTTTTGCGGCAAAAGGTATTACTAGATTCTTCTACTGTAAACTTATGTTGTGTCTTGTATAAATCAAAGCCATGTTGTTAGCGGTTTCTTTTATACAACAACAGACTTCCCAAGCAAGTTGGTGTAAGCTAGAAATGGAACTTCAATTCTAAGCCTTTAGCGTTTCTTATGTTAGAGCAAGAGTCAACCCTGATGAAAGTAATGTGCATTTGACTGTCAGAAAGTATTTGTCGTGACTATGAAAAGAG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9858#1 ------------------------------------------------------------ consensus_9858#3 ------------------------------------------------------------ consensus_9858#0 CTCGCCGTCAAATCTCCCCTCTTTCTCGCCGCCGGCGAGCAGCAGAAGCAGCGGCACCAG 60 consensus_9858#2 ------------------------------------------------------------ consensus_9858#1 ------------------------------------------------------------ consensus_9858#3 ------------------------------------------------------------ consensus_9858#0 CACCACCGGCTGTAGGCGCGATCTTGTAGGCTCATCGGAGATGGGGAAGAAGCAGCATAG 120 consensus_9858#2 ------------------------------------------------------------ consensus_9858#1 ------------------------------------------------------------ consensus_9858#3 ------------------------------------------------------------ consensus_9858#0 CAAGGACCGGATGTTCATAACGCGGACGGAGTGGGCGACGGAGTGGGGCGGCGCCAAGCA 180 consensus_9858#2 ------------------------------------------------------------ consensus_9858#1 ------------------------------------------------------------ consensus_9858#3 ------------------------------------------------------------ consensus_9858#0 GAAGGAGGCCGGCACGCCCTTCAAGCGCCTTCCCTTCTACTGCTGCGCGCTTACGTTTTT 240 consensus_9858#2 ------------------------------------------------------------ consensus_9858#1 ------------------------------------------------------------ consensus_9858#3 ------------------------------------------------------------ consensus_9858#0 ACCATTTGAGGATCCAGTGTGCACAGCAGATGGAAGCGTCTTTGATTTGATGAGCATAAT 300 consensus_9858#2 ------------------------------------------------------------ consensus_9858#1 ------------------------------------------------------------ consensus_9858#3 ------------------------------------------------------------ consensus_9858#0 TCCATACATTAAGAAGTTCGGGAAGCACCCAGTAACAGGAACACCACTCAAGCAGGAAGA 360 consensus_9858#2 ------------------------------------------------------------ consensus_9858#1 ------------------------------------------------------------ consensus_9858#3 ------------------------------------------------------------ consensus_9858#0 TCTAATGCCTTTAACATTCCACAAGAACTCAGATGGAGAGTTCCAGTGCCCTGTTTTGAA 420 consensus_9858#2 ------------------------------------------------------------ consensus_9858#1 ------------------------------------------------------------ consensus_9858#3 ------------------------------------------------------------ consensus_9858#0 TAAAGTTTTTACAGAATTCACGCATATAGTTGCTGTAAAGACTACTGGGAACGTCTTCTG 480 consensus_9858#2 ------------------------------------------------------------ consensus_9858#1 ------------------------------------------------------------ consensus_9858#3 ------------------------------------------------------------ consensus_9858#0 TTATGAGGTGGGGTTTGGCAATCCAAGAACTCAACATCAAGCCAAAGAATTGGAGAGAAT 540 consensus_9858#2 ------------------------------------------------------------ consensus_9858#1 ------------------------------------------------------------ consensus_9858#3 ------------------------------------------------------------ consensus_9858#0 TGCTAACTGATGAGCCCTTTACACGAAATGACTTGATAACAATTCAGAATCCAAATGCGG 600 consensus_9858#2 ------------------------------------------------------------ consensus_9858#1 ------------------------------------------------------------ consensus_9858#3 ------------------------------------------------------------ consensus_9858#0 TTGATAGCAAGATCCTAGGTGAATTTGACCATGTCAAGAAAGGCCTCAAACTTGAAGATG 660 consensus_9858#2 ------------------------------------------------------------ consensus_9858#1 ------------------------------------------------------------ consensus_9858#3 ------------------------------------------------------------ consensus_9858#0 AAGAGTTGCAACGAATGAAAAATGATCCAACCTACAACATAAATATTTCTGGTGATCTTA 720 consensus_9858#2 ------------------------------------------------------------ consensus_9858#1 ------------------------------------------------------------ consensus_9858#3 ------------------------------------------------------------ consensus_9858#0 AGCAAATGATTAAGGAACTTGGAACTGAAAAGGGAAAGTTAGCTTTTTTGCATGGTGGGG 780 consensus_9858#2 ------------------------------------------------------------ consensus_9858#1 ------------------------------------------------------------ consensus_9858#3 ------------------------------------------------------------ consensus_9858#0 GAGGGCAGAAAGCTCAAAAGGAAAGAGCTGCTGCACTTGCTGCTATATTGGCAAAAAAGG 840 consensus_9858#2 ------------------------------------------------------------ consensus_9858#1 ------------------------------------------------------------ consensus_9858#3 ------------------------------------------------------------ consensus_9858#0 AGAAGGATGACTCAAAATCTGGCAAAGAACCTAAACCTCATCAGCCTTTCAGTATTGTAG 900 consensus_9858#2 ------------------------------------------------------------ consensus_9858#1 ------------------------------------------------------------ consensus_9858#3 ------------------------------------------------------------ consensus_9858#0 ATGCTGCTTCTGCTTCTGTTCATGGCAGAAGTGCAGCCGCAGCAAAGGCTGCTACTGCTG 960 consensus_9858#2 ------------------------------------------------------------ consensus_9858#1 ------------------------------------------------------------ consensus_9858#3 ------------------------------------------------------------ consensus_9858#0 AGAAAACAGCTGCTAGAATAGCAATGCACATGGCAGGAGATCGAGCTCCTGTAAATGCTA 1020 consensus_9858#2 ------------------------------------------------------------ consensus_9858#1 ------------------------------------------------------------ consensus_9858#3 ------------------------------------------------------------ consensus_9858#0 AACTGGTTAAAAGCAGTTACACCACAGGAGCAGCTTCACGTTCTTTCACATCAACTGCCT 1080 consensus_9858#2 ------------------------------------------------------------ consensus_9858#1 ------------------------------------------------------------ consensus_9858#3 ------------------------------------------------------------ consensus_9858#0 ATGATCCTGTCACCAAAAATGAACTTGAGTATGTTAAGGTTGAAAAGAATCCAAAAAAGA 1140 consensus_9858#2 ------------------------------------------------------------ consensus_9858#1 ------------------------------------------------------------ consensus_9858#3 ------------------------------------------------------------ consensus_9858#0 AGGGATATGTTCAGTTGCATACCACCCATGGTGATTTGAATTTGGAGCTTCATTGTGATA 1200 consensus_9858#2 ------------------------------------------------------------ consensus_9858#1 ------------------------------------------------------------ consensus_9858#3 ------------------------------------------------------------ consensus_9858#0 TAACACCTCGGACATGTGAAAATTTCCTCACACATTGTGAAAATGGTTACTATAATGGTC 1260 consensus_9858#2 ------------------------------------------------------------ consensus_9858#1 ------------------------------------------------------------ consensus_9858#3 ------------------------------------------------------------ consensus_9858#0 TTATCTTCCATCGTAGTATCAAAAATTTCATGATTCAAGGAGGTGATCCAACTGGCACAG 1320 consensus_9858#2 ------------------------------------------------------------ consensus_9858#1 ------------------------------------------------------------ consensus_9858#3 ------------------------------------------------------------ consensus_9858#0 GAAGTGGAGGGGAGTCCATATGGGGTAAACCTTTCAAGGATGAACTGAATTCAAAACTTA 1380 consensus_9858#2 ------------------------------------------------------------ consensus_9858#1 ------------------------------CTAATTCTGGGCCTCATACCAACGGGTCCC 30 consensus_9858#3 ------------------------------------------------------------ consensus_9858#0 TACATTCAGGAAGAGGTGTTGTCAGCATGGCTAATTCTGGGCCTCATACCAATGGGTCCC 1440 consensus_9858#2 ------------------------------------------------------------ consensus_9858#1 AATTTTTCATCTTGTACAAGTCCGCACCACATTTAAATTTCAAGCATACGGTATTTGGCA 90 consensus_9858#3 ------------------------------------------------------------ consensus_9858#0 AATTTTTCATCTTGTACAAGTCCGCACCACATTTAAATTTCAAGCATACGGTATTTGGCA 1500 consensus_9858#2 ----------------------------------------GCTTCTTCTTCCTTCTCTCT 20 consensus_9858#1 TGGTGGTCGGTGGCTTGACCACTCTTTCGGCTATGGAAAAGGTTCCTGTTGATGATGACG 150 consensus_9858#3 --------------------------------------------CCTGTTGATGATGACG 16 consensus_9858#0 TGGTGGTCGGTGGCTTGACCACTCTTTCGGCTATGGAAAAGGTTCCTGTTGATGATGACG 1560 consensus_9858#2 CCCCGACCAATCCGACCCAAACGCTCCTCGCCGTCAAATCTCCCCTCTTTCTCGCCGCCG 80 * ** * * ** consensus_9858#1 ATCGACCATTGGAGGAAATAAAGATATTAAAAGTAAGTGTATTTGTGAACCCTTACACGG 210 consensus_9858#3 ATCGACCATTGGAGGAAATAAAGATATTAAAAGTAAGTGTATTTGTGAACCCTTACACGG 76 consensus_9858#0 ATCGACCATTGGAGGAAATAAAGATATTAAAAGTAAGTGTATTTGTGAACCCTTACACGG 1620 consensus_9858#2 G-CGAGCAGCAGAAGCAGCGGCACCAGCACCACCGGCTGTAGGCGCTATCTTGTAGGCTC 139 *** ** ** * * * * * **** * * * ** * consensus_9858#1 AACC-AGATGAAGAAGAAGAAGAAAAGGCAAAGGAAGAGGAGAAGAAAAAGGATGAGGAT 269 consensus_9858#3 AACC-AGATGAAGAAGAAGAAGAAAAGGCAAAGGAAGAGGAGAAGAAAAAGGATGAGGAT 135 consensus_9858#0 AACC-AGATGAAGAAGAAGAAGAAAAGGCAAAGGAAGAGGAGAAGAAAAAGGATGAGGAT 1679 consensus_9858#2 ATCGGAGATGGGGAAGAAGCAGCATAGCAAGGACCGGATGATCATAACGCGGACGGAGTG 199 * * ***** ******* ** * ** * ** ** * ** *** * * consensus_9858#1 TATGATAAGGTGGGATCATGGTATAGCAATCCAGGC--ACTGGCGTTGCTGGTTCAACTA 327 consensus_9858#3 TATGATAAGGTGGGATCATGGTATAGCAATCCAGGC--ACTGGCGTTGCTGGTTCAACTA 193 consensus_9858#0 TATGATAAGGTGGGATCATGGTATAGCAATCCAGGC--ACTGGCGTTGCTGGTTCAACTA 1737 consensus_9858#2 GGCGACGGAGTGGGGCGGCGCCAAGCAGAAGGAGGCCGGCACGCCCTTCAAGCGCCTTCC 259 ** ***** * * * **** * ** * * * * consensus_9858#1 GCTCTGGTGGTG-GCGTTGGCA-----ATTACCTAAAAGCTCGG-----ACAGCTG---- 372 consensus_9858#3 GCTCTGGTGGTG-GCGTTGGCA-----AGTACCTAAAAGCTCGG-----ACAGCTG---- 238 consensus_9858#0 GCTCTGGTGGTG-GCGTTGGCA-----AGTACCTAAAAGCTCGG-----ACAGCTG---- 1782 consensus_9858#2 CTTCTACTGCTGCGCGCTTACGTTTTTACCATTTGAGGATCCAGTGTGCACAGCAGATGG 319 *** ** ** *** * * * * * * * * ***** * consensus_9858#1 --GCTTTGCTGATGTGGTTGCACATGATTCAAACAAGAAAAGAAAAGCGAGTGTGTCTAA 430 consensus_9858#3 --GCTTTGCTGATGTGGTTGCAGATGATTCAAACAAGAAAAGAAAAGCGAGTGTGTCTAA 296 consensus_9858#0 --GCTTTGCTGATGTGGTTGCAGATGATTCAAACAAGAAAAGAAAAGCGAGTGTGTCTAA 1840 consensus_9858#2 AAGCGTCTTTGATTTGAT-GAGCATAATTCCATACATTAAGAAGTTCGGGAAGCACCCAG 378 ** * **** ** * * ** **** * * ** * * * * * consensus_9858#1 TGTTCAACTCAAGGATCTCTCTGGGTGGCACATCCCTGATGCACCTCCCCTCCTCTCACC 490 consensus_9858#3 TGTAGAATTTAAGGATTTCTCTGGGTGGTAGATTCCTGATGAACCTCCCCTTCTCTCAGA 356 consensus_9858#0 TGTAGAATTTAAGGATTTCTCTGGGTGGTAGATTCCTGATGAACCTCCCCTTCTCTCAGA 1900 consensus_9858#2 T----AACAGGAACACCACTCAAGCAGGAAGAT--CTAATGCCTTTAACATTC---CACA 429 * ** * * *** * ** * ** ** *** * * * * ** consensus_9858#1 ATAAATGCTTAGCGGAAACATCTGCTGCCACCCTGTGGCTCTTCCCTCACCCCTCGCCTC 550 consensus_9858#3 AGAAATGGCTAGTGGAAACTTCGGTAGCAGCACTGTGGCATTTCTTCAATCTTCTGCTAT 416 consensus_9858#0 AGAAATGGCTAGTGGAAACTTCGGTAGCAGCACTGTGGCATTTCTTCAATCTTCTGCTAT 1960 consensus_9858#2 AGAACT--CAGATGGAGAGTTCCAGTGCCCTGTTTTGA------ATAAAGTTTTTACAGA 481 * ** * *** * ** ** * ** * * consensus_9858#1 GCCTCCAACCTCACATGCC-CCAGCCTTACAATTCCCATTTCCTGTTTTCCCTC--CTCC 607 consensus_9858#3 GGATTTAAACTAAGATGCT-CAAGGTCCACAATTGAGATTCTCTGTAAGCAGAT--CCGA 473 consensus_9858#0 GGATTTAAACTAAGATGCT-CAAGGTCCACAATTAAGATTCTCTGTAAGCAGAT--CCGA 2017 consensus_9858#2 ATTCACGCATATAGTTGCTGTAAAGACTACTGGGAACGTCTTCTGTTATGAGGCAATCCA 541 * *** * ** * **** consensus_9858#1 GTTTCTTTCCACGACCCCCCCCAGAAAGACCGCTCTTCCG-CC-----TCCTCCGTTATT 661 consensus_9858#3 GTTGAGTAACATGATCCACTCTGGGTGGGT-GTTTTGCGG-CAAAAGGTATTACTAGATT 531 consensus_9858#0 GTTGAGTAACATGATCCACTCTGGGTGGGT-GTTTTGCGG-CAAAAG--AGTTGCACACT 2073 consensus_9858#2 AGAACTCAACATCAAGCCAAAGAATTGGAGAGAATTGCTAACTGATGAGCCCTTTACACG 601 ** * * * * * * * * consensus_9858#1 CTCCCCATGTTTCCCCTCTTTTCGTCCCG-C-TATTTTCTCTTTTTTTCCCTGTCCGCTA 719 consensus_9858#3 CTTCTACTGTAAACTTATGTTGTGTCTTG-TATAAATCAAAGCCATGTTGTTAGCGGTTT 590 consensus_9858#0 GAGCTATAAGAGGGATGCTTGGGACTTAG-G--AAATTTGACTGGTTCAATAACTGGAAA 2130 consensus_9858#2 AAATGACTTGATAACAATTCAGAATCCAAATGCGGTTGATAGCAAGATCCTAGGTGAATT 661 * consensus_9858#1 TTGTTATC--ACGTCAGTCCCTCCTCAC-------------TTCCCTTTTCTACACCC-- 762 consensus_9858#3 CTTTTATACAACAACAGACTTCCCAAGCAA---------GTTGGTGTAAGCTAGAAATGG 641 consensus_9858#0 TTCATGCTT-CCATCAGTC----------------------------------------- 2148 consensus_9858#2 TGACCATGTCAAGAAAGGCCTCAAACTTGAAGATGAAGAGTTGCAACGAATGATAAATGA 721 ** * consensus_9858#1 -----CCTTTACCATATTCTCTTA-TGCCCTCTTTGTCAGGACCCGTTTCCCCCC----C 812 consensus_9858#3 ---AACTTCAATTCTAAGCCTTTAGCGTTTCTTATGTTAGAGCAAGAGTCAACCC----T 694 consensus_9858#0 ------------------------------------------------------------ consensus_9858#2 TCCAACCTACAACATAAATATTTCTGGTGATCTTAAGCAAATGATTAAGGAACTTGGAAC 781 consensus_9858#1 CGC-AGTGTTTCAT-CATTTTCCGGCTTCGTTCTTCCTTACCGCCTCTCTGTCCGTTCTT 870 consensus_9858#3 GATGAAAGTAATGTGCATTTGACTG-TCAGAAAGTATTTGTCGTGACTATGAAAAGAG-- 751 consensus_9858#0 ------------------------------------------------------------ consensus_9858#2 TGAAAAGGGGAAGTTAGCTTTTTTGCATGGTGGGGGAGGGCAGAAAGCTCAAAAGGAAAG 841 consensus_9858#1 CTTTTCTCCTCCCTCCC 887 consensus_9858#3 ----------------- consensus_9858#0 ----------------- consensus_9858#2 AGCTGCTGCACT----- 853 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||