cluster # 9862

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Oryza sativa
cluster # 9862 cluster # 9862 Sequences # 7 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9862#0 length = 917 sequences # 7
consensusID : consensus_9862#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 917
fasta sequence
                              [CAGAGTAGAAACTCTGACTTCGGAGACGCGTACGCTTCTCTCTCTTTCC-CGGGGCTCAGCTCGCTTCCGGAAGCTCTCTCGCGAGGCGCCCATGGCGGCGGGAGAAGGCAAGGCCCCGACGCTCGCCGCCGAGGAACACACACTCCCACCCCACGAGGTCCCTGTGGAAAATTCATCCTCTGAAAAATCTTCTGATAACAGTGTGGCTGAAGTTGTTCCTGAGAAAGATGCTGAAACACCAGCAGCTCAGGACACCACTTCTGTTGTTGAGGACAAAAGTGAAACTCCCGAGATGACAGCATCCTCTGAGAAGCCAGAAGAAGAGGGGAGCAATGCTGCTACAGAGGAAAGCAATGAGGCTGAAGAGGAAACAATTGATGAGAAGCCAGAAATTAAGATTGAGACGGCTCCCGCTGATTTTCGTTTCCCAACAACAAATCAAACAAGGCATTGCTTCACACGCTATATTGAATATCATA-GGTGTGTAGCTGCAAAAGGAGAGGGTGCTCCTGAGTGTGAAAAATTTG-CAAAATATTATCGATCACTTTGCCCAAGTGAATGGATTGAGCGTTGGAACGAACAACGTGAGAATGGCACATTCCCTGGACCCTTGTAGGCCATAACAAAGAAAAACCCATGCTATCATCCCA-CAAATTCCCAACCAATCTTTCATGAATAACCGGACAAAATAACCA-AGAGCTGATGCTGTCAGTCACTTGTTTCTATTGAACAGTTCTTACAAATAAAAGTCCTGACTGGTTCTAAGTCGAAGAAGGCGCTTCTGTATTTAGGTAACACAGTTGTTACGGAATTGTTCAAATAATTCACCTTTGGAACAATGGAATGTACCCAGCTTGCTGTCCCAAAAAAACAATGTTCATATGATATGACGTGCAATGTTCATATGAAAAAAAAAA]

[+] EMBL CF320924             [  GAGTAGAAACTCTGACTTCGGAGACGCGTACGCTTCTCTCTCTTTCC CGGGGCTCAGCTCGCTTCCGGAAGCTCTCTCGCGAGGCGCCCATGGCGGCGGGAGAAGGCAAGGCCCCGACGCTCGCCGCCGAGGAACACACACTCCCACCCCACGAGGTCCCTGTGGTAAATTCATCCTCTGAAAAATCTTCTGATAACAGTGTGGCTGAAGTTGTTCCTGAGAAAGATGCTGAAACACCAGCAGCTCAGGACACCACTTCTGTTGTTGAGGACAAAAGTGAAACTCCCGAGATGACAGCATCCTCTGAGAAGCCAGAAGAAGAGGGGAGCAATGTTGCTACAGAGGAAAGCAATGAGGCTGAAGAGGAAACAATTGATGAGAAGCCAGAAATTAAGATTGAGACGGCTCCCGCTGATTTTCGTTTCCCAACAACAAATCAAACAAGGCATTGCTTCACACGCTATATTGAATATCATAGGGTGTGTAGCTGCAAAAGGAGAGGGTGCTCCTGAGTGTGAAAAATTTG CAAAATATTATCGATCACTNTGCCCAAGTGAATGGATTGAGCGTTGGAACGAACAACGTGAGAATGGCACATTCC                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CF337460             [cagctcgaagcCTCGGACTTCGGAGACGCGTACGCTTCTCTCTCTTTCCACGGGGCTCAGCTCGCTTCCGGAAGCTCTCTCGCGAGGCGCCCATGGCGGCGGGAGAAGGCAAGGCCCCGACGCTCGCCGCCGAGGAACACACACTCCCACCCCACGAGGTCCCTGTGGAAAATTCATCCTCTGAAAAATCTTCTGATAACAGTGTGGCTGAAGTTGTTCCTGAGAAAGATGCTGAAACACCAGCAGCTCAGGACACCACTTCTGTTGTTGAGGACAAAAGTGAAACTCCCGAGATGACAGCATCCTCTGAGAAGCCAGAAGAAGAGGGGAGCAATGCTGCTACAGAGGAAAGCAATGAGGCTGAAGAGGAAACAATTGATGAGAAGCCAGAAATTAAGATTGAGACGGCTCCCGCTGATTTTCGTTTCCCAACAACAAATCAAACAAGGCATTGCTTCACACGCTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CF318724             [                   TCGGAGACGCGTACGCTTCTCTCTCTTTCC CGGGGCTCAGCTCGCTTCCGGAAGCTCTCTCGCGAGGCGCCCATGGCGGCGGGAGAAGGCAAGGCCCCGACGCTCGCCGCCGAGGAACACACACTCCCACCCCACGAGGTCCCTGTGGAAAATTCATCCTCTGAAAAATCTTCTGATAACAGTGTGGCTGAAGTTGTTCCTGAGAAAGATGCTGAAACACCAGCAGCTCAGGACACCACTTCTGTTGTTGAGGACAAAAGTGAAACTCCCGAGATGACAGCATCCTCTGAGAAGCCAGAAGAAGAGGGGAGCAATGCTGCTACAGAGGAAAGCAATGAGGCTGAAGAGGAAACAATTGATGAGAAGCCAGAAATTAAGATTGAGACGGCTCCCGCTGATTTTCGTTTCCCAACAACAAATCAAACAAGGCATTGCTTCACACGCTATATTGAATACCATA GGTGTGTAGCTGC AAAGGAGAGGGTGCTCCTGAGTGTGAAAAATTTG CAAAATATTATCGATCACTTTGCCCAAGTGAATGGATTGAGCGTTGGAACGAACAACGTGAGAATGGC                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CF318725             [                                                                                                                                                                                                                                                                                          AAACTCCCGAGATGACAGCATCCTCTGAGAAGCCAGAAGAAGAGGGGAGCAATGCTGCTACAGAGGAAAGCAATGAGGCTGAAGAGGAAACAATTGATGAGAAGCCAGAAATTAAGATTGAGACGGCTCCCGCTGATTTTCGTTTCCCAACAACAAATCAAACAAGGCATTGCTTCACACGCTATATTGAATACCATA GGTGTGTAGCTGCAAAAGGAGAGGGTGCTCCTGAGTGTGAAAAATTTG CAAAATATTATCGATCACTTTGCCCAAGTGAATGGATTGAGCGTTGGAACGAACAACGTGAGAATGGCACATTCCCTGGACCCTTGTAGGCCATAACAAAGAAAAACCCATGCTATCATCCCA CAAATTCCCAACCAATCTTTCATGAATGACCGGACAAAATAACCA AGAGCTGATGCTGTCAGTCACTTGTTTCTATTGAACAGTTCTTACAAATAAAAGTCCTGACTGGTTCTAAGTCGAAGAAGGCGCTTCTGTATTTAGGTAACACAGTTGTTACGGAATTGTTCAAATAATTCACCTTTGGAACAATGGAATGTACCCAGCTTGCTGTCCCAAAAAA                                               ]
[-] EMBL CF320925             [                                                                                                                                                                                                                                                                                                                              AAGAAGAGGGGAGCAATGTTGCTACAGAGGAAAGCAATGAGGCTGAAGAGGAAACAATTGATGAGAAGCCAGAAATTAAGATTGAGACGGCTCCCGCTGATTTTCGTTTCCCAACAACAAATCAAACAAGGCATTGCTTCACACGCTATATTGAATATCATA GGTGTGTAGCTGCAAAAGGAGAGGGTGCTCCTGAGTGTGAAAAATTTG CAAAATATTATCGATCACTTTGCCCAAGTGAATGGATTGAGCGTTGGAACGAACAACGTGAGAATGGCACATTCCCTGGACCCTTGTAGGCCATAACAAAGAAAAACCCATGCTATCATCCCA CAAATTCCCAACCAATCTTTCATGAATAACCGGACAAAATAACCA AGAGCTGATGCTGTCAGTCACTTGTTTCTATTGAACAGTTCTTACAAATAAAAGTCCTGACTGGTTCTAAGTCGAAGAAGGCGCTTCTGTATTTAGGTAACACAGTTGTTACGGAATTGTTCAAATAATTCACC TTGGAACAAaaaa                                                                          ]
[-] EMBL CF317999             [                                                                                                                                                                                                                                                                                                                                GAAGAGGGGAGCAATGCTGCTACAGAGGAAAGCAATGAGGCTGAAGAGGAAACAATTGATGAGAAGCCAGAAATTAAGATTGAGACGGCTCCCGCTGATTTTCGTTTCCCAACAACAAATCAAACAAGGCATTGCTTCACACGCTATATTGAATATCATA GGTGTGTAGCTGCAAAAGGAGAGGGTGCTCCTGAGTGTGAAAAATTTG CAAAATATTATCGATCACTTTGCCCAAGTGAATGGATTGAGCGTTGGAACGAACAACGTGAGAATGGCACATTCCCTGGACCCTTGTAGGCCATAACAAAGAAAAACCCATGCTATCATCCCA CAAATTCCCAACCAATCTTTCATGAATAACCGGACAAAATAACCA AGAGCTGATGCTGTCAGTCACTTGTTTCTATTGAACAGTTCTTACAAATAAAAGTCCTGACTGGTTCTAAGTCGAAGAAGGCGCTTCTGTATTTAGGTAACACAGTTGTTACGGAATTGTTCAAATAATTCACCTTTGGAACAATGGAATGTACCCAGCTTGCTGTCCCAAAAAAA                                              ]
[+] EMBL BI803395             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AGAGGGTGCTCCTGAGTGTGAAAAATTTGCCAAAATATTATCGATCACTTTGCCCAAGTGAATGGATTGAGCGTTGGAACGAACAACGTGAGAATGGCACATTCCCTGGACCCTTGTAGGCCATAACAAAGAAAAACCCATGCTATCATCCCACCAAATTCCCAACCAATCTTTCATGAATAACCGGACCAAATAACCACAGAGCTGATGCTGTCAGTCACTTGTTTCTATTGAACAGTTCTTACAAATAAAAGTCCTGACTGGTTCTAAGTCGAAGAAGGCGCTTCTGTATTTAGGTAACACAGTTGTTACGGAATTGTTCAAATAATTCACCTTTGGAACCATGGAATGTACCCAGCTTGCTGTCCCACCCGTGCAATGTTCATATGATATGACGTGCAATGTTCATATGAAAAAAAAAA]




>consensus_9862#0
CAGAGTAGAAACTCTGACTTCGGAGACGCGTACGCTTCTCTCTCTTTCCCGGGGCTCAGC
TCGCTTCCGGAAGCTCTCTCGCGAGGCGCCCATGGCGGCGGGAGAAGGCAAGGCCCCGAC
GCTCGCCGCCGAGGAACACACACTCCCACCCCACGAGGTCCCTGTGGAAAATTCATCCTC
TGAAAAATCTTCTGATAACAGTGTGGCTGAAGTTGTTCCTGAGAAAGATGCTGAAACACC
AGCAGCTCAGGACACCACTTCTGTTGTTGAGGACAAAAGTGAAACTCCCGAGATGACAGC
ATCCTCTGAGAAGCCAGAAGAAGAGGGGAGCAATGCTGCTACAGAGGAAAGCAATGAGGC
TGAAGAGGAAACAATTGATGAGAAGCCAGAAATTAAGATTGAGACGGCTCCCGCTGATTT
TCGTTTCCCAACAACAAATCAAACAAGGCATTGCTTCACACGCTATATTGAATATCATAG
GTGTGTAGCTGCAAAAGGAGAGGGTGCTCCTGAGTGTGAAAAATTTGCAAAATATTATCG
ATCACTTTGCCCAAGTGAATGGATTGAGCGTTGGAACGAACAACGTGAGAATGGCACATT
CCCTGGACCCTTGTAGGCCATAACAAAGAAAAACCCATGCTATCATCCCACAAATTCCCA
ACCAATCTTTCATGAATAACCGGACAAAATAACCAAGAGCTGATGCTGTCAGTCACTTGT
TTCTATTGAACAGTTCTTACAAATAAAAGTCCTGACTGGTTCTAAGTCGAAGAAGGCGCT
TCTGTATTTAGGTAACACAGTTGTTACGGAATTGTTCAAATAATTCACCTTTGGAACAAT
GGAATGTACCCAGCTTGCTGTCCCAAAAAAACAATGTTCATATGATATGACGTGCAATGT
TCATATGAAAAAAAAAA
clustalw multiple alignements is not computed in this case