These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9866#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 2156 fasta sequence [CCGTCTCCCGCCTTCGTCCTCCCCTCCAGCCGCCGACCGACCGAGCGCGATGGCGGCGGCGCGGCTCCGGCTGCTGTCCGCGGGGCTCCTCTCGCCGGCGGTGTCCAGGGCGCGGCACTCTTCTTCCCTGCAGGGTCTCCGCGCGCTGTCCACGCTCTCCACTACGCTCGGGTCCGGCGCGGGGGAGGACGAGATCGAGCGCATCCGCCGCGAGTTCGAGGACGCCAAGCGGAACTACCTCAGCATCCCCGTCGCCATCAAGGACATGGCCAAGATGAACCCGCAAGGCATTTATGTGAACAAGAACGTCAAACTGGATGACCTGCAAGTCTATGGTTTTGACTATGACTACACGCTGTCCCACTACTCCGAGCACCTGCAGTGCTTGATCTACGATCTCGCCAAGAAGCACTTGGTCAATGAGTTGAAGTATCCGGAGAGCTGCTTGAAGTATGAGTATGACCACGGCTTTCCCATCAGGGGGCTCTATTATGACAGATTAAAAGGTTGCCTTTTGAAGCTTGATTTTTTCGGGTCTATCGAACCAGATGGTTGCTTCTTTGGGCGGCATAAGCTGAGTTTGAGTGAGATAAAAGAACTCTATGGCACACGGCATATTGGCAGAGATCAAGCTCGCCAGCTTGTTGGGCTAATGGATGTCTTCTGTTTTAGTGAGGCATGCCTTCTTGCTGATATAGTTCAGCACTTTGTAGATGCCAGGCTGGAGTTTGATGCATCCTATGTATATGAAGACGTAAACCAATCGATTCAGCATGTCCACAGAAGTGGTCTGATTCACAGGAAAATTCTTTCGGAGCCTCAGAAATATCTGATAAAAAATAGCCAGGTCTTCCGTTTCTTAAAGATGCTAAGAGAGAAGGGGAAAAACCTATTTCTTCTCACCAACTCACCTTTCTACTTTGTGGATGGAGGAATGAGCTACTTGCTTGAGGATGAGCATTTTGATGGGAATTCCTGGAGGGAGCTCTTTGACGTTGTCATTGCGCAGGCAAATAAACCGACTTTCTATAATTCAGACCACCCATTCAGGGTATATGACACTCAAAAGGATACACTAGCTTTTACTGCAGTTGACAAGTTTCTGCCAAATGAAGTTTATTATCACGGTTGCTTAAAATCATTTCTGCAGATTACAAAGTGGAGAGGCCCAGAGGTTATATACTTTGGTGATCATCTTCTCAGTGACTTGAGAGGGCCTGCAAAAGCTGGCTGGCGAACAGCTGCTGTAATTCGTGAACTTGAGGATGAAATAGAAATCCAGAATGGTGACAGCTACCGGTTCCAACAGGCAAAATTAAGTATAATACATGATCTACTTGGGAAAGTTCATGCAACTGTGGTTAGCACTGAGAAAGGACAAGTTTACCGAGCATTGCTTGATGAGTTGAATGCAGAAAGGCGTCAATGTCGATCTGCGATGCGAGATCTTTTCAATAGCTCTTTTGGTGCAACCTTCCTTACAGATACTGGAAGGGAATCATCGTTTGCTTATCACATCCATCAATATGCAGATATTTACACCAGCAAGCTTGAGAATTTTTTGTCATATGCCCCTGAATCATGGCTCCATCCACCTCATGACATAAAGATAATGCCACATAATGCGAAGGTCCCAGCGAGTTTGTTCAGTGGCTCGTAGCTCATTCTATCCATTTCCGATGGAGAACCGTAACACCCATTATGGTTTCTGTGTCCGACCCGAGAGTATGAACTGCCATGCCACTGCATCTGGTTAGCTGATGAATAAAGCTTGGGTACACCCAACCCAACATACGTGGCGCCAACTCAGCAAGATGTGGCTAGTGCTGCGATTGACAGAAGAGAAGTGATGGTTGTTATGTTCTGTACCGTTATTTGAGGATGATTTCGGTCTGACAGGCGTGGTTTTCTGTTTCCAAGACATCCAGAGGACTAAACAACCAACCAAATGATGGTTGCTAATAAGAATTGTTTTCCAATCATCCATCTTGTTTCTCATTGTTCTATTCTCCTTTTGGATGAGATATGTAAAACACACATGATTCGTATTCCGTTAACAGT-AAAATCTCCCAAATTAT-GGGTAATCCTTTTCCTTCAAGCTTCTTTTGAATGATC----AGCAAGCAAGGAATGGATAAACATATACAGTATTTGAATTT] [+] EMBL AK073882 [CCGTCTCCCGCCTTCGTCCTCCCCTCCAGCCGCCGACCGACCGAGCGCGATGGCGGCGGCGCGGCTCCGGCTGCTGTCCGCGGGGCTCCTCTCGCCGGCGGTGTCCAGGGCGCGGCACTCTTCTTCCCTGCAGGGTCTCCGCGCGCTGTCCACGCTCTCCACTACGCTCGGGTCCGGCGCGGGGGAGGACGAGATCGAGCGCATCCGCCGCGAGTTCGAGGACGCCAAGCGGAACTACCTCAGCATCCCCGTCGCCATCAAGGACATGGCCAAGATGAACCCGCAAGGCATTTATGTGAACAAGAACGTCAAACTGGATGACCTGCAAGTCTATGGTTTTGACTATGACTACACGCTGTCCCACTACTCCGAGCACCTGCAGTGCTTGATCTACGATCTCGCCAAGAAGCACTTGGTCAATGAGTTGAAGTATCCGGAGAGCTGCTTGAAGTATGAGTATGACCACGGCTTTCCCATCAGGGGGCTCTATTATGACAGATTAAAAGGTTGCCTTTTGAAGCTTGATTTTTTCGGGTCTATCGAACCAGATGGTTGCTTCTTTGGGCGGCATAAGCTGAGTTTGAGTGAGATAAAAGAACTCTATGGCACACGGCATATTGGCAGAGATCAAGCTCGCCAGCTTGTTGGGCTAATGGATGTCTTCTGTTTTAGTGAGGCATGCCTTCTTGCTGATATAGTTCAGCACTTTGTAGATGCCAGGCTGGAGTTTGATGCATCCTATGTATATGAAGACGTAAACCAATCGATTCAGCATGTCCACAGAAGTGGTCTGATTCACAGGAAAATTCTTTCGGAGCCTCAGAAATATCTGATAAAAAATAGCCAGGTCTTCCGTTTCTTAAAGATGCTAAGAGAGAAGGGGAAAAACCTATTTCTTCTCACCAACTCACCTTTCTACTTTGTGGATGGAGGAATGAGCTACTTGCTTGAGGATGAGCATTTTGATGGGAATTCCTGGAGGGAGCTCTTTGACGTTGTCATTGCGCAGGCAAATAAACCGACTTTCTATAATTCAGACCACCCATTCAGGGTATATGACACTCAAAAGGATACACTAGCTTTTACTGCAGTTGACAAGTTTCTGCCAAATGAAGTTTATTATCACGGTTGCTTAAAATCATTTCTGCAGATTACAAAGTGGAGAGGCCCAGAGGTTATATACTTTGGTGATCATCTTCTCAGTGACTTGAGAGGGCCTGCAAAAGCTGGCTGGCGAACAGCTGCTGTAATTCGTGAACTTGAGGATGAAATAGAAATCCAGAATGGTGACAGCTACCGGTTCCAACAGGCAAAATTAAGTATAATACATGATCTACTTGGGAAAGTTCATGCAACTGTGGTTAGCACTGAGAAAGGACAAGTTTACCGAGCATTGCTTGATGAGTTGAATGCAGAAAGGCGTCAATGTCGATCTGCGATGCGAGATCTTTTCAATAGCTCTTTTGGTGCAACCTTCCTTACAGATACTGGAAGGGAATCATCGTTTGCTTATCACATCCATCAATATGCAGATATTTACACCAGCAAGCTTGAGAATTTTTTGTCATATGCCCCTGAATCATGGCTCCATCCACCTCATGACATAAAGATAATGCCACATAATGCGAAGGTCCCAGCGAGTTTGTTCAGTGGCTCGTAGCTCATTCTATCCATTTCCGATGGAGAACCGTAACACCCATTATGGTTTCTGTGTCCGACCCGAGAGTATGAACTGCCATGCCACTGCATCTGGTTAGCTGATGAATAAAGCTTGGGTACACCCAACCCAACATACGTGGCGCCAACTCAGCAAGATGTGGCTAGTGCTGCGATTGACAGAAGAGAAGTGATGGTTGTTATGTTCTGTACCGTTATTTGAGGATGATTTCGGTCTGACAGGCGTGGTTTTCTGTTTCCAAGACATCCAGAGGACTAAACAACCAACCAAATGATGGTTGCTAATAAGAATTGTTTTCCAATCATCCATCTTGTTTCTCATTGTTCTATTCTCCTTTTGGATGAGATATGTAAAACACACATGATTCGTATTCCGTTAACAGT AAAATCTCCCAAATTAT GGGTAATCCTTTTCCTTCAAGCTTCTTTTGAATGATC AGCAAGCAAGGAATGGATAAACATATACAGTA ] [+] EMBL CA998305 [ CTCAGCATCCCCGTCGCCATCAAGGACATGGCCAAGATGAACCCGCAAGGCATTTATGTGAACAAGAACGTCAAACTGGATGACCTGCAAGTCTATGGTTTTGACTATGACTACACGCTGTCCCACTACTCCGAGCACCTGCAGTGCTTGATCTACGATCTCGCCAAGAAGCACTTGGTCAATGAGTTGAAGTATCCGGAGAGCTGCTTGAAGTATGAGTATGACCACGGCTTTCCCATCAGGGGGCTCTATTATGACAGATTAAAAGGTTGCCTTTTGAAGCTTGATTTTTTCGGGTCTATCGAACCAGATGGTTGCTTCTTTGGGCGGCATAAGCTGAGTTTGAGTGAGATAAAAGAACTCTATGGCACACGG ] [+] EMBL CA997863 [ GCAGACATCAAGCTCGCCAACTTGTTGGGCTAATGGATGTCTTCTGTTTTAATGAGGCATGCCTGCTTGATGATTTAGGTGACCACTTTGTAGATGCCAGGATGGAGTTTGATGCATCCTATGTATATGAAGACGTAAACCAATCGATTCAGCATGTCCACAGAAGTGGTCTGATTCACAGGAAAATTCTTTCGGAGCCTCAGAAATATCTGATAAAAAATAGCCAGGTCTTACGTTTGTTAAAGATGCTCAGAGAGAAGGGGAAAAGCCTATTTCTTCTCACCAACTCACCTTTCTACTTTGTGGATGGAGGAATGAGCTACTTCCTTGACGATGAGCATTCTGATGGGAATTCCTGAAGGGAGCTCTTTGACGTTGACATTGCGCAGGCAAATAAACCGACTTTCTGTAATTCAGACCACCCATTCAGGGTATATGACACTCAA ] [+] EMBL CF307362 [ TGACTTGAGAGGGCCTGCAAAAGCTGGCTGGCGAACAGCTGCTGTAATTCGTGAACTTGAGGATGAAATAGAAATCCAGAATGGTGACAGCTACCGGTTCCAACAGGCAAAATTAAGTATAATACATGATCTACTTGGGAAAGTTCATGCAACTGTGGTTAGCACTGAGAAAGGACAAGTTTACCGAGCATTGCTTGATGAGTTGAATGCAGAAAGGCGTCAATGTCGATCTGCGATGCGAGATCTTTTCAATAGCTCTTTTGGTGCAACCTTCCTTACAGATACTGGAAGGGAATCATCGTTTGCTTATCACATCCATCAATATGCAGATATTTACACCAGCAAGCTTGAGAATTTTTTGTCATATGCCCCTGAATCATGGCTCCATCCACCTCATGACATAAAGATAATGCCACATAATGCGAAGGTCCCAGCGAGTTTGTTCAGTGGCTCGTAGCTCATTCTATCCATTTCCGATGGAGAACCGTAACACCCATTATGGTTTCTGTGTCCGACCCGAGAGTATGAACTGCCATGCCACTGCATCTGGTTAGCTGATGAATAAAGCTTGGGTACACCCAACCCAACA ] [-] EMBL CB663845 [ CAACTGTGGTTAGCACTGAGAAAGGACAAGTTTACCGAGCATTGCTTGATGAGTTGAATGCAGAAAGGCGTCAATGTCGATCTGCGATGCGAGATCTTTTCAATAGCTCTTTTGGTGCAACCTTCCTTACAGATACTGGAAGGGAATCATCGTTTGCTTATCACATCCATCAATATGCAGATATTTACACCAGCAAGCTTGAGAATTTTTTGTCATATGCCCCTGAATCATGGCTCCATCCACCTCATGACATAAAGATAATGCCACATAATGCGAAGGTCCCAGCGAGTTTGTTCAGTGGCTCGTAGCTCATTCTATCCATTTCCGATGGAGAACCGTAACACCCATTATGGTTTCTGTGTCCGACCCGAGAGTATGAACTGCCATGCCACTGCATCTGGTTAGCTGATGAATAAAGCTTGGGTACACCCAACCCAACATACGTGGCGCCAACTCAGCAAGATGTGGCTAGTGCTGCGATTGACAGAAGAGAAGTGATGGTTGTTATGTTCTGTACCGTTATTTGAGGATGATTTCGGTCTGACAGGCGTGGTTTTCTGTTTCCAAGACATCCAGAGGACTAAACAACCAACCAAATGATGGTTGCTAATAAGAATTGTTTTCCAATCATCCATCTTGTTTCTCATTGTTCTATTCTCCTTTTGGATGAGATATGTAAAACACACATGATTCGTATTCCGTTAACAGT AAAATCTCCCAAATTAT GGGTAATCCTTTTCCTTCAAGCTTCTTTT ] [+] EMBL AK063811 [ GGCTCCATCCACCTCATGACATAAAGATAATGCCACATAATGCGAAGGTCCCAGCGAGTTTGTTCAGTGGCTCGTAGCTCATTCTATCCATTTCCGATGGAGAACCGTAACACCCATTATGGTTTCTGTGTCCGACCCGAGAGTATGAACTGCCATGCCACTGCATCTGGTTAGCTGATGAATAAAGCTTGGGTACACCCAACCCAACATACGTGGCGCCAACTCAGCAAGATGTGGCTAGTGCTGCGATTGACAGAAGAGAAGTGATGGTTGTTATGTTCTGTACCGTTATTTGAGGATGATTTCGGTCTGACAGGCGTGGTTTTCTGTTTCCAAGACATCCAGAGGACTAAACAACCAACCAAATGATGGTTGCTAATAAGAATTGTTTTCCAATCATCCATCTTGTTTCTCATTGTTCTATTCTCCTTTTGGATGAGATATGTAAAACACACATGATTCGTATTCCGTTAACAGT AAAATCTCCCAAATTAT GGGTAATCCTTTTCCTTCAAGCTTCTTTTGAATGATC AGCAAGCAAGGAATGGATAAACATATACAGTATT ] [-] EMBL D42241 [ TCCATCTTGTTTCTCATTGTTCTATTCTCCTTTT GATGAGATATGTAAAACACACATGATTCGTATTCCGTTAACAGTAAAAATCTCCCAAATTATGGGGTAATCCTTTTCCTTCAAGCTTCTTTTGAATGATCAGCAAGCAAGCAAGGAATGGATAAACATATACAGTATTTGAATTT] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||