cluster # 9870

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 9870 cluster # 9870 Sequences # 7 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9870#0 length = 1457 sequences # 7
consensusID : consensus_9870#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1457
fasta sequence
                              [GCTGAGCTCCCCAAGCGCCGTGAATTGGTAGGACTTTTGTGGGAGGCGCTGGTTTCTGCTCTACTCACAGCAAGTTTCTAAAGACTCGGAAGCAATTGATTGTGAAGTATTCCTTTCAGTTCGGCTTGAAGTAGTCCTCTCAGACCATTGCCGCATATAAGAGTAGCTTATTACCTTGTATAGGAAAAAGTAGAAAGCTTATTCCGAGCATGTCTTGTTCATAATAGACTGGACTCTTTGATTCCTGTGTGTTTCTGGCAGATCCAAGTAGCTGACTGGGTGCAGCATATGCTTTTTCTAACGTTGGGCGTATGATGCACCCCACAATCTGTGAACTATCCCTAGTCACTCAGATCAACGGCGCATTATCTCTCTTCCAATCTGGTTGATGGGTAGCGCCTGCGAAGCTGGTACGGACGAGCCTTCCCGAGACGATGTTAAGGGGACAGGGAATGGCATCCTGGAGAATGGTCATAGTCACAAGCCAGAGGAGGAGGAATGGAGGAATGGCATGGGAGAGGACTTACCCAATGGGCACAGTACACCACCAGAGCCCCAGCAAACAGATGAACAGAAGGAGCACCAAGTGCAGATTGTCCGGTGGGAGAGGTTCCTCCCTGTGAAGACACTGAGGGTCTTGCTGGTGGAGAATGATGACTCTACCCGTCAGGTGGTCAGCGCACTGCTTCGTAAGTGTTGTTATGAAGTTATCCCTGCTGAAAATGGGCTACATGCATGGCAATGTCTTGAAGATCTGCAAAACCACATTGACCTTGTATTGACCGAGGTCGTAATGCCACGTCTGTCTGGCATTGGTCTGCTTAGT-AGATCACAAGCCACAAAATTTGC-AGGATA-TCCCGTGATTATGATGTCTTCGAATGACTCAATGGGTACAGTCTTTAAGTGTTTGTCAAAAGGAGCAGTTGACTTTCTAGTGAAGCCTATACGTAAGAATGAACTTAAGAACCTTTGGCAGCATGTTTGGAGACGATGCCACAGTTCCAGTGGCAGTGGAAGCGAAAGTGGCATCCGAACACAAAAGTGTACCAAACCAAAGGTTGATGATGAATATGAGAATAACAGCGGTAGCAATAATGACAACGAGGATGATGATGACAATGATGAAGATGATGACGACTTAAGTGTTGGACACAACGCTAGGGATGGCAGTGATAATGGCAGTGGCACTCAAAGTTCATGGACAAAGCGTGCAGTGGAGATTGACAGCCCACAACAAATGTCTCCTGATCAACCATCCGATCTACCAGATAGTACTTGTGCGCAAGTAATTCACCCCACATCAGAGATATGCAGCAACAGGTGGTTACCGACTGCAAATAAAAGGAGCGGAAAGAAACATAAAGAAAATAACGATGACTCCATGGGGAAGTACTTAGAAATAGGAGCTCCTAGAAATTCTAGTATGGAGTACCAATCTTCTCCAAGAGAGATGTCCG]

[+] EMBL CB661908             [GCTGAGCTCCCCAAGCGCCGTGAATTGGTAGGACTTTTGTGGGAGGCGCTGGTTTCTGCTCTACTCACAGCAAGTTTCTAAAGACTCGGAAGCAATTGATTGTGAAGTATTCCTTTCAGTTCGGCTTGAAGTAGTCCTCTCAGACCATTGCCGCATATAAGAGTAGCTTATTACCTTGTATAGGAAAAAGTAGAAAGCTTATTCCGAGCATGTCTTGTTCATAATAGACTGGACTCTTTGATTCCTGTGTGTTTCTGGCAGATCCAAGTAGCTGACTGGGTGCAGCATATGCTTTTTCTAACGTTGGGCGTATGATGCACCCCACAATCTGTGAACTATCCCTAGTCACTCAGATCAACGGCGCATTATCTCTCTTCCAATCTGGTTGATGGGTAGCGCCTGCGAAGCTGGTACGGACGAGCCTTCCCGAGACGATGTTAAGGGGACAGGGAATGGCATCCTGGAGAATGGTCATAGTCACAAGCCAGAGGAGGAGGAATGGAGGAATGGCATGGGAGAGGACTTACCCAATGGGCACAGTACACCACCAGAGCCCCAGCAAACAGATGAACAGAAGGAGCACCAAGTGCAGATTGTCCGGTGGGAGAGGTTCCTCCCTGTGAAGACACTGAGGGTCTTGCTGGTGGAGAATGATGACTCTACCCGTCAGGTGGTCAGCGCACTGCTTCGTAAGTGTTGTTATGAAGTTATCCCTGCTGAAAATGGGCTACATGCATGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CB657333             [GCTGAGCTCCCCAAGCGCCGTGAATTGGTAGGACTTTTGTGGGAGGCGCTGGTTTCTGCTCTACTCACAGCAAGTTTCTAAAGACTCGGAAGCAATTGATTGTGAAGTATTCCTTTCAGTTCGGCTTGAAGTAGTCCTCTCAGACCATTGCCGCATATAAGAGTAGCTTATTACCTTGTATAGGAAAAAGTAGAAAGCTTATTCCGAGCATGTCTTGTTCATAATAGACTGGACTCTTTGATTCCTGTGTGTTTCTGGCAGATCCAAGTAGCTGACTGGGTGCAGCATATGCTTTTTCTAACGTTGGGCGTATGATGCACTCCACAATCTGTGAACTATCCCTAGTCACTCAGATCAACGGCGCATTATCTCTCTTCCAATCTGGTTGATGGGTAGCGCCTGCGAAGCTGGTACGGACGAGCCTTCCCGAGACGATGTTAAGGGGACAGGGAATGGCATCCTGGAGAATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CB647426             [                  CGTGAATTGGTAGGACTTTTGTGGGAGGCGCTGGTTTCTGCTCTACTCACAGCAAGTTTCTAAAGACTCGGAAGCAATTGATTGTGAAGTATTCCTTTCAGTTCGGCTTGAAGTAGTCCTCTCAGACCATTGCCGCATATAAGAGTAGCTTATTACCTTGTATAGGAAAAAGTAGAAAGCTTATTCCGAGCATGTCTTGTTCATAATAGACTGGACTCTTTGATTCCTGTGTGTTTCTGGCAGATCCAAGTAGCTGACTGGGTGCAGCATATGCTTTTTCTAACGTTGGGCGTATGATGCACCCCACAATCTGTGAACTATCCCTAGTCACTCAGATCAACGGCGCATTATCTCTCTTCCAATCTGGTTGATGGGTAGCGCCTGCGAAGCTGGTACGGACGAGCCTTCCCGAGACGATGTTAAGGGGACAGGGAATGGCATCCTGGAGAATGGTCATAGTCACAAGCCAGAGGAGGAGGAATGGAGGAATGGCATGGGAGAGGACTTACCCAATGGGCACAGTACACCACCAGAGCCCCAGCAAACAGATGAACAGAAGGAGCACCAAGTGCAGATTGTCCGGTGGGAGAGGTTCCTCCCTGTGAAGACACTGAGGGTCTTGCTGGTGGAGAATGATGACTCTACCCGTCAGGTGGTCAGCGCACTGCTTCGTAAGTGTTGTTATGAAGTTATCCCTGCTGAAAATGGGCTACATGCATGGCAATGTCTTGAAGATCTGCAAAACCACATTGACCTTGTATTGACCGAGGTCGTAATGCCACGTCTGTCTGGCATTGGTCTGCTTAGT AGATCACAAGCCACAAAATTTGC AGGATA TCCCGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CB647428             [                  CGTGAATTGGTAGGACTTTTGTGGGAGGCGCTGGTTTCTGCTCTACTCACAGCAAGTTTCTAAAGACTCGGAAGCAATTGATTGTGAAGTATTCCTTTCAGTTCGGCTTGAAGTAGTCCTCTCAGACCATTGCCGCATATAAGAGTAGCTTATTACCTTGTATAGGAAAAAGTAGAAAGCTTATTCCGAGCATGTCTTGTTCATAATAGACTGGACTCTTTGATTCCTGTGTGTTTCTGGCAGATCCAAGTAGCTGACTGGGTGCAGCATATGCTTTTTCTAACGTTGGGCGTATGATGCACCCCACAATCTGTGAACTATCCCTAGTCACTCAGATCAACGGCGCATTATCTCTCTTCCAATCTGGTTGATGGGTAGCGCCTGCGAAGCTGGTACGGACGAGCCTTCCCGAGACGATGTTAAGGGGACAGGGAATGGCATCCTGGAGAATGGTCATAGTCACAAGCCAGAGGAGGAGGAATGGAGGAATGGCATGGGAGAGGACTTACCCAATGGGCACAGTACACCACCAGAGCCCCAGCAAACAGATGAACAGAAGGAGCACCAAGTGCAGATTGTCCGGTGGGAGAGGTTCCTCCCTGTGAAGACACTGAGGGTCTTGCTGGTGGAGAATGATGACTCTACCCGTCAGGTGGTCAGCGCACTGCTTCGTAAGTGTTGTTATGAAGTTATCCCTGCTGAAAATGGGCTACATGCATGGCAATGTCTTGAAGATCTGCAAAACCACATTGACCTTGTATTGACCGAGGTCGTAATGCCACGTCTGTCTGGCATTGGTCTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CB646363             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AGTGCAGATTGTCCGGTGGGAGAGGTTCCTCCCTGTGAAGACACTGAGGGTCTTGCTGGTGGAGAATGATGACTCTACCCGTCAGGTGGTCAGCGCACTGCTTCGTAAGTGTTGTTATGAAGTTATCCCTGCTGAAAATGGGCTACATGCATGGCAATGTCTTGAAGATCTGCAAAACCACATTGACCTTGTATTGACCGAGGTCGTAATGCCACGTCTGTCTGGCATTGGTCTGCTTAGTAAGATCACAAGCCACAAAATTTGCAAGGATATTCCCGTGATTATGATGTCTTCGAATGACTCAATGGGTACAGTCTTTAAGTGTTTGTCAAAAGGAGCAGTTGACTTTCTAGTGAAGCCTATACGTAAGAATGAACTTAAGAACCTTTGGCAGCATGTTTGGAGACGATGCCACAGTTCCAGTGGCAGTGGAAGCGAAAGTGGCATCCGAACACAAAAGTGTACCAAACCAAAGGTTGATGATGAATATGAGAATAACAGCGGTAGCAATAATGACAACGAGGATGATGATGACAATGATGAAGATGATGACGACTTAAGTGTTGGACACAACGCTAGGGATGGCAGTGATAATGGCAGTGGCACTCAAAGTTCATGGACAAAGCGTGCAGTGGAGATTGACAGCCCACAACAAATGTCTCCTGATCAACCATCCGATCTACCAGATAGTACTTGTGCGCAAGTAATTCACCCCACATCAGAGATATGCAGCAACAGGTGGTTACCGACTGCAA                                                                                                                        ]
[+] EMBL AK099526             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TTGACTTTCTAGTGAAGCCTATACGTAAGAATGAACTTAAGAACCTTTGGCAGCATGTTTGGAGACGATGCCACAGTTCCAGTGGCAGTGGAAGCGAAAGTGGCATCCGAACACAAAAGTGTACCAAACCAAAGGTTGATGATGAATATGAGAATAACAGCGGTAGCAATAATGACAACGAGGATGATGATGACAATGATGAAGATGATGACGACTTAAGTGTTGGACACAACGCTAGGGATGGCAGTGATAATGGCAGTGGCACTCAAAGTTCATGGACAAAGCGTGCAGTGGAGATTGACAGCCCACAACAAATGTCTCCTGATCAACCATCCGATCTACCAGATAGTACTTGTGCGCAAGTAATTCACCCCACATCAGAGATATGCAGCAACAGGTGGTTACCGACTGCAAATAAAAGGAGCGGAAAGAAACATAAAGAAAATAACGATGACTCCATGGGGAAGTACTTAGAAATAGGAGCTCCTAGAAATTCTAGTATGGAGTACCAATCTTCTCCAAGAGAGATGTCC ]
[-] EMBL CB661909             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GTGATAATGGCAGTGGCACTCAAAGTTCATGGACAAAGCGTGCAGTGGAGATTGACAGCCCACAACAAATGTCTCCTGATCAACCATCCGATCTACCAGATAGTACTTGTGCGCAAGTAATTCACCCCACATCAGAGATATGCAGCAACAGGTGGTTACCGACTGCAAATAAAAGGAGCGGAAAGAAACATAAAGAAAATAACGATGACTCCATGGGGAAGTACTTAGAAATAGGAGCTCCTAGAAATTCTAGTATGGAGTACCAATCTTCTCCAAGAGAGATGTCCG]




>consensus_9870#0
GCTGAGCTCCCCAAGCGCCGTGAATTGGTAGGACTTTTGTGGGAGGCGCTGGTTTCTGCT
CTACTCACAGCAAGTTTCTAAAGACTCGGAAGCAATTGATTGTGAAGTATTCCTTTCAGT
TCGGCTTGAAGTAGTCCTCTCAGACCATTGCCGCATATAAGAGTAGCTTATTACCTTGTA
TAGGAAAAAGTAGAAAGCTTATTCCGAGCATGTCTTGTTCATAATAGACTGGACTCTTTG
ATTCCTGTGTGTTTCTGGCAGATCCAAGTAGCTGACTGGGTGCAGCATATGCTTTTTCTA
ACGTTGGGCGTATGATGCACCCCACAATCTGTGAACTATCCCTAGTCACTCAGATCAACG
GCGCATTATCTCTCTTCCAATCTGGTTGATGGGTAGCGCCTGCGAAGCTGGTACGGACGA
GCCTTCCCGAGACGATGTTAAGGGGACAGGGAATGGCATCCTGGAGAATGGTCATAGTCA
CAAGCCAGAGGAGGAGGAATGGAGGAATGGCATGGGAGAGGACTTACCCAATGGGCACAG
TACACCACCAGAGCCCCAGCAAACAGATGAACAGAAGGAGCACCAAGTGCAGATTGTCCG
GTGGGAGAGGTTCCTCCCTGTGAAGACACTGAGGGTCTTGCTGGTGGAGAATGATGACTC
TACCCGTCAGGTGGTCAGCGCACTGCTTCGTAAGTGTTGTTATGAAGTTATCCCTGCTGA
AAATGGGCTACATGCATGGCAATGTCTTGAAGATCTGCAAAACCACATTGACCTTGTATT
GACCGAGGTCGTAATGCCACGTCTGTCTGGCATTGGTCTGCTTAGTAGATCACAAGCCAC
AAAATTTGCAGGATATCCCGTGATTATGATGTCTTCGAATGACTCAATGGGTACAGTCTT
TAAGTGTTTGTCAAAAGGAGCAGTTGACTTTCTAGTGAAGCCTATACGTAAGAATGAACT
TAAGAACCTTTGGCAGCATGTTTGGAGACGATGCCACAGTTCCAGTGGCAGTGGAAGCGA
AAGTGGCATCCGAACACAAAAGTGTACCAAACCAAAGGTTGATGATGAATATGAGAATAA
CAGCGGTAGCAATAATGACAACGAGGATGATGATGACAATGATGAAGATGATGACGACTT
AAGTGTTGGACACAACGCTAGGGATGGCAGTGATAATGGCAGTGGCACTCAAAGTTCATG
GACAAAGCGTGCAGTGGAGATTGACAGCCCACAACAAATGTCTCCTGATCAACCATCCGA
TCTACCAGATAGTACTTGTGCGCAAGTAATTCACCCCACATCAGAGATATGCAGCAACAG
GTGGTTACCGACTGCAAATAAAAGGAGCGGAAAGAAACATAAAGAAAATAACGATGACTC
CATGGGGAAGTACTTAGAAATAGGAGCTCCTAGAAATTCTAGTATGGAGTACCAATCTTC
TCCAAGAGAGATGTCCG
clustalw multiple alignements is not computed in this case