Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 9871 cluster # 9871       Sequences # 7       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9871#0 length = 3338 sequences # 5  
 consensus_9871#1 length = 840 sequences # 1  
consensus_9871#2 length = 695 sequences # 1  
consensusID : consensus_9871#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 3338
fasta sequence 
                              [CTAGCCTCCCTAAAACGAAAAAAAAAGGAAAAAAAAAGAAAAAAAAAAACTGCGGCGAGCCGGAGACGTGGCTCCCCGACTCCTCGCGCGCGCGGCCGGCGGCGAGAAGGGCGGCGGCGGCGGCGGGGAAGGCCATCCTCCCCTCATGAGCGGCGTGGCCTCCTCGCGCGCGCGTCGGGGGAGCAGGCAGGTCTGGAGGGGCGACGCCGCCGACGACATCCTTCCGTCTCGGTTCGGATCGGATTGAAGGAATGCCATGAGGAACCACTGAGGATTTATTGGTGGTAATGGAGAATGATCATGGAGATCTAGATGATGTGGGATCGGGGTGGCTTGAAGTGAAAAAAAAACACCGATCCAGCTCAAAATTCACACTGCAGAGGTCTTCAGGAGGTTCCAATGATAATAAAATTTCAAACTCGTCCTCACAATCTCAGACCAACTTTGGCAGTGATAGTGCAAAGTGGTGCGACAGGTTACAATGCCCACCTCAGATCACAAAGGTTAATGTTTGCGTTAATGAACCGGGTAGCGTAGTCACGATGGTTGTTCATGATGAAGAATGTGCTCATGCAGATGTTACCAACCTGAAGAGTGAATTAAGTGTTTCAGACTTGGAGCATGCAATAGAAAAACCTAAAAAACTGCTAGTGACTGAAGAAATAAGTGAACCTCCCAACGTTGGTAAGATTGATTGTGCTGTTTCTCTAACTCCACATCAATCCTCCAACTGTTCAAGTGGTCTTGCAAAATCTTCAGGTCTTTATGATCATGTTAAAGGCCCTCCAATGACAGATAGTATAGGTGTTTTATCGAACACTTCTGTCAGGTTTGGTGATTTTGATGAAGTGCCAGGTCTAGCATTACCTGCAGATGCGTGTAGAAATAATAGTTCATCTCAAAAACACATACACATTGGCGATGCTACAGAATTCATAAATGAATGTAAAGATGAAAGTGAACTTAAAACTGAGCCGAATTTTTGTAAAACAATTGTTGAGACATCTCCTGTTATTATTCAAGGGGCAGAAACGCCCACTGAAGATGAGAGCAAGGTATTGGATATATGTGAAATAACAGATAATCGTTTGGATGTTAGTGGTTCACCTTCCTTGGACGACACAGTCTCCTTGTCCTGTGCAAACAATGATCTTGAAGTTCCAGTTAAGTCGTCTTCTGTTGCTTCAACAGAAAGCCAGACAGTTCTTCATGCACCAACTTCAGCAGATTTTGGAGGTGAAACTGCTGGAAGCAAAGAAAGGTTCAGGCAGAGACTCTGGTGTTTTCTTTTTGAGAATCTGAATAGGGCTGTGGATGAACTTTACCTCCTCTGTGAGTTAGAATGTGACATGGAGCAAATTAATGAATCCATCCTTGTTCTTGAAGAAGCTATATCTGATTTTCAAGAACTGAAATCCAGGGCGGAGCATTTTGATAACACCAAAAAATCTACTGCTCTACCAAAGGAGGGGATGCCAATGGCTGTGAAAGCTGACCATCGAAGACCACATGCCTTGTCTTGGGAGGTCAGAAGGATGACAAGTTCACCACACAGGCAAGAGATATTGTCTTCATCTCTAGAGGCATTTCAGAGAATTCAATTGGAACTGGCTCGCAAACAAGCTGGTATAACAACAGAGAGCTTTGCATCCAGCTCTTCTGGAGAAGTTTCTGGTAGCTCATCAAAGCTAACCACAGCATCAGCGACTGTTGGAAGTATAAGTTTGAAAGTGGAGAGTCAGGTGAAACTTTCTGACACTGAGAAAAAAATTGCTGGAGAGAGGCAAAGCAAGGATACAATCAAGTCAGGTAGATCACCTCCACAAAATATGCCTTCATCTTCTGCAAAGAGTCGAAAAGGATCACTGGAACCTATCTCTGAGGTAGAGAAGCATAATTTTAGGAAGGATAAGGAATTGCCAGAAAACAAATTTGACAAGCTCAGGTCAACAGATACGGCAAAAAGGACTACAGTTCATACTGAGAAGGAGAAACAAAATGCAGCACCACGGAAGTCATTGGATGCCTGGAAAGAGAAAAGAAACTGGGAAGATATACTGAAATCTCCTGTTCGGAGTTCTCGTGTCTCCCATTCCCCTGGTGTTGGCAGAAAAGTACCAGAGCGTGCTCGTGTTCTACATGACAAGTTAATGTCTCCTGAAAAGAAGAAAAGAAGTGCTTTGGACATGAAAAAGGAAGCAGAAGAAAAACATGCACGAGCTTTACGAATCCGGAGTCAACTAGAAAGTGAGAGAGTTCAGAGGCTGCAACGTACCTCTGAAAAGTTAAATCGTGTCAATGAATGGCAGGCTGTGCGCAGCTCAAAACTGCGAGAAGTAATGAATGCACGCCACCAACGTAGTGAATCTCGTCATGAGGCATACCTTGCCCAGGTTGCAAAAAGAGCTGGTGATGAGAGTACTAAGGTCAATGAGGTCCGTTTTATTACATCACTAAATGAAGAAAACAAGAAATTCTTACTGAGGCAGAAACTTCATGGTTCTGAAATGCGGAGAGCTGAAAAGCTACTGGTGATCAAAACAAAGCAAAAGGAGGACATTGCAAGGGAAGAAGCTGTATTGGAACGGAGAAAAATTCTTGAAGCTGAGAAGATGCAACGTCTTGCTGAAATACAGCGTAAGAAAGAAGAAGCTATTATCAGAAGAGAAGAGGAGCGCAAAGCATCTAGTGCTGCACGAGAAGCGAGGGCTGCAGAGCAGCAACGTAGAAAAGAGATAAGAGCAAAAGCTCAACAAGAAGAGGCTGAACTGTTAGCCCAAAAATTAGCAGAGAAGCTTCGTGAAAGTGAGCAGCGCCGTAAGTATTACCTTGAGCAGATACGTGAGAGAGCTTCAATGGATTTCAGGGATCAGCCTTCACCTTTTCAGCGCCGCTTTCCAAGTAAAGATAACCAAAATCGTTCTAGCTCAGCTAATAGTGGAGAAGATTCACAAATAATAAGCAGTGCCAACACTGCTGAGTCTGGTGTTAAATCATTCAACTCCACGCAATTGAAACGAAGGATTAAAAAGATACGCCAGAGGTTAATGGCTCTTAAGCATGATTTTGTTGAACCACTCATAGGTGAAAATACAGGAATTGTGCACAGGTCTGCTCTAGGTACTGCAAAAGCTAAGTTAAGTAGATGGCTTCAGGACTTGCAAAGACTTCGTCAAGCTAGAAAAGAGGGTGCTGCGAGTATTGGTTTGATTGTTAGTGACATTACAAAGGTACTTCTTGTTTGTTCCATATTG---TGTTGTAATAAAGATGTTTACTAATACCACTTTCTTTTTATTTTGGCACAGTATTTAGAAGGAAAGGATCTTGAATTACATGCA]

[+] EMBL AK066631             [CTAGCCTCCCTAAAACGAAAAAAAAAGGAAAAAAAAAGAAAAAAAAAAACTGCGGCGAGCCGGAGACGTGGCTCCCCGACTCCTCGCGCGCGCGGCCGGCGGCGAGAAGGGCGGCGGCGGCGGCGGGGAAGGCCATCCTCCCCTCATGAGCGGCGTGGCCTCCTCGCGCGCGCGTCGGGGGAGCAGGCAGGTCTGGAGGGGCGACGCCGCCGACGACATCCTTCCGTCTCGGTTCGGATCGGATTGAAGGAATG CATGAGGAACCACTGAAGATTTATTGGTGGTAATGGAGAATGATCATGGAGATCTAGATGATGTGGGATCAGGGTGGCTTGAAGTGAAAAAAAAACACCGATCCAGCTCAAAATTCACATTGCAGAGGTCTTCAGGAGGTTCCAATGATAATAAAATTTCAAACTCGTCCTCACAATCTCAGACCAACTTTGGCAGTGATAGTGCAAAGTGGTGTGACAGGTTACAATGCTCACCTCAGATCACAAAGGTTAATGTTTGCGTTAATGAACCGGGTAGCGTAGTCACAATGGTTGTTCATGGTGAAGAATGTGCTCATGCAGATGCTAGCAATCTGAAGAGTGAATTAAGTGTTTCAGCCTCGGATCATGCAATAGAAAAACCTAAAAAACTGCTAGTGACTGAAGAAATAAGTGAACCTCCCAACGTTGGTAAGATTGACTGTGCTGATTCTCCAACTCCACATCAATCCTCCAACTGTTCAAGTGGTCTTGCAAAATCTTCAGGTTTTTATGATCATGTTAAAGGCCCTCCAATGACAGATAGTATAGGTGTTTTATCGAACACTTCTGTCAGGTTTGGTGATTTTGATGAAGTGCCAGGTCTAGCATTACCTGCAGATGCATGTAGAAATAATAGTTCATCTCAAAAACACATACACATTGGCGATGCTACAGAATTCATAAATGAATGTAAAGATGAAAGTGAACTTAAAACTGAGCCGAATTCTTGTAAAACAATTGTTGAGACATCTCCTGTTATTATTCAAGGGGCAGAAACGCCCACTGAAGATGAGAGCAAGGTATTGGATATATGTGAAATAACAGATAATCGTTTGGATGTTAGTGGTTCACCTTCCTTGGACGACACAGTCTCCTTGTCCTGTGCAAACAATGATCTTGAAGTTCCAGTTAAGTCGTCTTCTGTTGCTTCAACAGAAAGCCAGACAGTTCTTCATGCACCAACTTCAGCAGATTTTGGAGGTGAAACTGCTGGAAGCAAAGAAAGGTTCAGGCAGAGACTCTGGTGTTTTCTTTTTGAGAATCTGAATAGGGCTGTGGATGAACTTTACCTCCTCTGTGAGTTAGAATGTGACATGGAGCAAATTAATGAATCCATCCTTGTTCTTGAAGAAGCTATATCTGATTTTCAAGAACTGAAATCCAGGGCGGAGCATTTTGATAACACCAAAAAATCTACTGCTCTACCAAAGGAGGGGATGCCAATGGCTGTGAAAGCTGACCATCGAAGACCACATGCCTTGTCTTGGGAGGTCAGAAGGATGACAAGTTCACCACACAGGCAAGAGATATTGTCTTCATCTCTAGAGGCATTTCAGAGAATTCAATTGGAACTGGCTCGCAAACAAGCTGGTATAACAACAGAGAGCTTTGCATCCAGCTCTTCTGGAGAAGTTTCTGGTAGCTCATCAAAGCTAACCACAGCATCAGCGACTGTTGGAAGTATAAGTTTGAAAGTGGAGAGTCAGGTGAAACTTTCTGACACTGAGAAAAAAATTGCTGGAGAGAGGCAAAGCAAGGATACAATCAAGTCAGGTAGATCACCTCCACAAAATATGCCTTCATCTTCTGCAAAGAGTCGAAAAGGATCACTGGAACCTATCTCTGAGGTAGAGAAGCATAATTTTAGGAAGGATAAGGAATTGCCAGAAAACAAATTTGACAAGCTCAGGTCAACAGATACGGCAAAAAGGACTACAGTTCATACTGAGAAGGAGAAACAAAATGCAGCACCACGGAAGTCATTGGATGCCTGGAAAGAGAAAAGAAACTGGGAAGATATACTGAAATCTCCTGTTCGGAGTTCTCGTGTCTCCCATTCCCCTGGTGTTGGCAGAAAAGTACCAGAGCGTGCTCGTGTTCTACATGACAAGTTAATGTCTCCTGAAAAGAAGAAAAGAAGTGCTTTGGACATGAAAAAGGAAGCAGAAGAAAAACATGCACGAGCTTTACGAATCCGGAGTCAACTAGAAAGTGAGAGAGTTCAGAGGCTGCAACGTACCTCTGAAAAGTTAAATCGTGTCAATGAATGGCAGGCTGTGCGCAGCTCAAAACTGCGAGAAGTAATGAATGCACGCCACCAACGTAGTGAATCTCGTCATGAGGCATACCTTGCCCAGGTTGCAAAAAGAGCTGGTGATGAGAGTACTAAGGTCAATGAGGTCCGTTTTATTACATCACTAAATGAAGAAAACAAGAAATTCTTACTGAGGCAGAAACTTCATGGTTCTGAAATGCGGAGAGCTGAAAAGCTACTGGTGATCAAAACAAAGCAAAAGGAGGACATTGCAAGGGAAGAAGCTGTATTGGAACGGAGAAAAATTCTTGAAGCTGAGAAGATGCAACGTCTTGCTGAAATACAGCGTAAGAAAGAAGAAGCTATTATTAGAAGAGAAGAGGAGCGCAAAGCATCTAGTGCTGCACGAGAAGCGAGGGCTGCAGAGCAGCAACGTAGAAAAGAGATAAGAGCAAAAGCTCAACAAGAAGAGGCTGAACTGTTAGCCCAAAAATTAGCAGAGAAGCTTCGTGAAAGTGAGCAGCGCCGTAAGTATTACCTTGAGCAGATACGTGAGAGAGCTTCAATGGATTTCAGGGATCAGCCTTCACCTTTTCAGCGCCGCTTTCCAAGTAAAGATAACCAAAATCGTTCTAGCTCAGCTAATAGTGGAGAAGATTCACAAATAATAAGCAGTGCCAACGCTGCTGAGTCTGGTGTTAAATCATTCAATTCCACGCAAATGAAACGAAGGATTAAAAAGATACGCCAGAGGTTAATGGCTCTTAAGCATGATTTTGTTGAACCACTCATAGGCGAAAATACAGGAATTGTGCACAGGTCTGCTCTAGGTACTGCAAAAGCTAAGTTAAGTAGATGGCTTCAGGACTTGCAAAGACTTCGTCAAGCTAGAAAAGAGGGTGCTGCGAGTATTGGTTTGATTGTTAGTGACATGACAAAGGTACTTCTTGTTTGTTCCATATTG   TGTTGTAATAAAGATGTTTACTAATACCACTTTCTTTTT                                             ]
[+] EMBL CB633473             [                                                                                                                                                                                                                                     CGGTTCGGATCGGATTGAAGGAATGCCATGAGGAACCACTGAGGATTTATTGGTGGTAATGGAGAATGATCATGGAGATCTAGATGATGTGGGATCGGGGTGGCTTGAAGTGAAAAAAAAACACCGATCCAGCTCAAAATTCACACTGCAGAGGTCTTCAGGAGGTTCCAATGATAATAAAATTTCAAACTCGTCCTCACAATCTCAGACCAACTTTGGCAGTGATAGTGCAAAGTGGTGCGACAGGTTACAATGCCCACCTCAGATCACAAAGGTTAATGTTTGCGTTAATGAACCGGGTAGCGTAGTCACGATGGTTGTTCATGATGAAGAATGTGCTCATGCAGATGTTACCAACCTGAAGAGTGAATTAAGTGTTTCAGACTTGGAGCATGCAATAGAAAAACCTAAAAAACTGCTAGTGACTGAAGAAATAAGTGAACCTCCCAACGTTGGTAAGATTGATTGTGCTGTTTCTCTAACTCCACATCAATCCTCCAACTGTTCAAGTGGTCTTGCAAAATCTTCAGGTCTTTATGATCATGTTAAAGGCCCTCCAATGACAGATAGTATAGGTGTTTTATCGAACACTTCTGTCAGGTTTGGTGATTTTGATGAAGTGCCAGGTCTAGCATTACCTGCAGATGCGTGTAGAAATAATAGTTCATCTCAAAAACACATACACATTGGCGATGCTACAGAATTCATAAATGAATGTAAAGATGAAAGTGAACTTAAAACTGAGCCGAATTTTTGTAAAACAATTGTTGAGACATCTCCTGTTATTATTCAAGGng                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CB633471             [                                                                                                                                                                                                                                     CGGTTCGGATCGGATTGAAGGAATGCCATGAGGAACCACTGAGGATTTATTGGTGGTAATGGAGAATGATCATGGAGATCTAGATGATGTGGGATCGGGGTGGCTTGAAGTGAAAAAAAAACACCGATCCAGCTCAAAATTCACACTGCAGAGGTCTTCAGGAGGTTCCAATGATAATAAAATTTCAAACTCGTCCTCACAATCTCAGACCAACTTTGGCAGTGATAGTGCAAAGTGGTGCGACAGGTTACAATGCCCACCTCAGATCACAAAGGTTAATGTTTGCGTTAATGAACCGGGTAGCGTAGTCACGATGGTTGTTCATGATGAAGAATGTGCTCATGCAGATGTTACCAACCTGAAGAGTGAATTAAGTGTTTCAGACTTGGAGCATGCAATAGAAAAACCTAAAAAACTGCTAGTGACTGAAGAAATAAGTGAACCTCCCAACGTTGGTAAGATTGATTGTGCTGTTTCTCTAACTCCACATCAATCCTCCAACTGTTCAAGTGGTCTTGCAAAATCTTCAGGTCTTTATGATCATGTTAAAGGCCCTCCAATGACAGATAGTATAGGTGTTTTATCGAACACTTCTGTCAGGTTTGGTGATTTTGATGAAGTGCCAGGTCTAGCATTACCTGCAGATGCGTGTAGAAATAATAGTTCATCTCAAAAACACATACACATTGGCGATGCTACAGAATTCATAAATGAATGTAAAGATGAAAGTGAACTTAAAACTGAGCCGAATTTTTGTAAAACAATTGTTGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CB633472             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AACAAAGCAAAAGGAGGACATTGCAAGGGAAGAAGCTGTATTGGAACGGAGAAAAATTCTTGAAGCTGAGAAGATGCAACGTCTTGCTGAAATACAGCGTAAGAAAGAAGAAGCTATTATCAGAAGAGAAGAGGAGCGCAAAGCATCTAGTGCTGCACGAGAAGCGAGGGCTGCAGAGCAGCAACGTAGAAAAGAGATAAGAGCAAAAGCTCAACAAGAAGAGGCTGAACTGTTAGCCCAAAAATTAGCAGAGAAGCTTCGTGAAAGTGAGCAGCGCCGTAAGTATTACCTTGAGCAGATACGTGAGAGAGCTTCAATGGATTTCAGGGATCAGCCTTCACCTTTTCAGCGCCGCTTTCCAAGTAAAGATAACCAAAATCGTTCTAGCTCAGCTAATAGTGGAGAAGATTCACAAATAATAAGCAGTGCCAACACTGCTGAGTCTGGTGTTAAATCATTCAACTCCACGCAATTGAAACGAAGGATTAAAAAGATACGCCAGAGGTTAATGGCTCTTAAGCATGATTTTGTTGAACCACTCATAGGTGAAAATACAGGAATTGTGCACAGGTCTGCTCTAGGTACTGCAAAAGCTAAGTTAAGTAGATGGCTTCAGGACTTGCAAAGACTTCGTCAAGCTAGAAAAGAGGGTGCTGCGAGTATTGGTTTGATTGTTAGTGACATTACAAAGGTACTTCTTGTTTGTTCCATATTGTGTTGTTGTAATAAAGATGTTTACTAATACCACTTTCTTTTTATTTTGGCACAGTATTTAGAAGGAAAGGATCTTGA          ]
[-] EMBL CB633474             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AAGAAGCTGTATTGGAACGGAGAAAAATTCTTGAAGCTGAGAAGATGCAACGTCTTGCTGAAATACAGCGTAAGAAAGAAGAAGCTATTATCAGAAGAGAAGAGGAGCGCAAAGCATCTAGTGCTGCACGAGAAGCGAGGGCTGCAGAGCAGCAACGTAGAAAAGAGATAAGAGCAAAAGCTCAACAAGAAGAGGCTGAACTGTTAGCCCAAAAATTAGCAGAGAAGCTTCGTGAAAGTGAGCAGCGCCGTAAGTATTACCTTGAGCAGATACGTGAGAGAGCTTCAATGGATTTCAGGGATCAGCCTTCACCTTTTCAGCGCCGCTTTCCAAGTAAAGATAACCAAAATCGTTCTAGCTCAGCTAATAGTGGAGAAGATTCACAAATAATAAGCAGTGCCAACACTGCTGAGTCTGGTGTTAAATCATTCAACTCCACGCAATTGAAACGAAGGATTAAAAAGATACGCCAGAGGTTAATGGCTCTTAAGCATGATTTTGTTGAACCACTCATAGGTGAAAATACAGGAATTGTGCACAGGTCTGCTCTAGGTACTGCAAAAGCTAAGTTAAGTAGATGGCTTCAGGACTTGCAAAGACTTCGTCAAGCTAGAAAAGAGGGTGCTGCGAGTATTGGTTTGATTGTTAGTGACATTACAAAGGTACTTCTTGTTTGTTCCATATTGTGTTGTTGTAATAAAGATGTTTACTAATACCACTTTCTTTTTATTTTGGCACAGTATTTAGAAGGAAAGGATCTTGAATTACATGCA]




>consensus_9871#0
CTAGCCTCCCTAAAACGAAAAAAAAAGGAAAAAAAAAGAAAAAAAAAAACTGCGGCGAGC
CGGAGACGTGGCTCCCCGACTCCTCGCGCGCGCGGCCGGCGGCGAGAAGGGCGGCGGCGG
CGGCGGGGAAGGCCATCCTCCCCTCATGAGCGGCGTGGCCTCCTCGCGCGCGCGTCGGGG
GAGCAGGCAGGTCTGGAGGGGCGACGCCGCCGACGACATCCTTCCGTCTCGGTTCGGATC
GGATTGAAGGAATGCCATGAGGAACCACTGAGGATTTATTGGTGGTAATGGAGAATGATC
ATGGAGATCTAGATGATGTGGGATCGGGGTGGCTTGAAGTGAAAAAAAAACACCGATCCA
GCTCAAAATTCACACTGCAGAGGTCTTCAGGAGGTTCCAATGATAATAAAATTTCAAACT
CGTCCTCACAATCTCAGACCAACTTTGGCAGTGATAGTGCAAAGTGGTGCGACAGGTTAC
AATGCCCACCTCAGATCACAAAGGTTAATGTTTGCGTTAATGAACCGGGTAGCGTAGTCA
CGATGGTTGTTCATGATGAAGAATGTGCTCATGCAGATGTTACCAACCTGAAGAGTGAAT
TAAGTGTTTCAGACTTGGAGCATGCAATAGAAAAACCTAAAAAACTGCTAGTGACTGAAG
AAATAAGTGAACCTCCCAACGTTGGTAAGATTGATTGTGCTGTTTCTCTAACTCCACATC
AATCCTCCAACTGTTCAAGTGGTCTTGCAAAATCTTCAGGTCTTTATGATCATGTTAAAG
GCCCTCCAATGACAGATAGTATAGGTGTTTTATCGAACACTTCTGTCAGGTTTGGTGATT
TTGATGAAGTGCCAGGTCTAGCATTACCTGCAGATGCGTGTAGAAATAATAGTTCATCTC
AAAAACACATACACATTGGCGATGCTACAGAATTCATAAATGAATGTAAAGATGAAAGTG
AACTTAAAACTGAGCCGAATTTTTGTAAAACAATTGTTGAGACATCTCCTGTTATTATTC
AAGGGGCAGAAACGCCCACTGAAGATGAGAGCAAGGTATTGGATATATGTGAAATAACAG
ATAATCGTTTGGATGTTAGTGGTTCACCTTCCTTGGACGACACAGTCTCCTTGTCCTGTG
CAAACAATGATCTTGAAGTTCCAGTTAAGTCGTCTTCTGTTGCTTCAACAGAAAGCCAGA
CAGTTCTTCATGCACCAACTTCAGCAGATTTTGGAGGTGAAACTGCTGGAAGCAAAGAAA
GGTTCAGGCAGAGACTCTGGTGTTTTCTTTTTGAGAATCTGAATAGGGCTGTGGATGAAC
TTTACCTCCTCTGTGAGTTAGAATGTGACATGGAGCAAATTAATGAATCCATCCTTGTTC
TTGAAGAAGCTATATCTGATTTTCAAGAACTGAAATCCAGGGCGGAGCATTTTGATAACA
CCAAAAAATCTACTGCTCTACCAAAGGAGGGGATGCCAATGGCTGTGAAAGCTGACCATC
GAAGACCACATGCCTTGTCTTGGGAGGTCAGAAGGATGACAAGTTCACCACACAGGCAAG
AGATATTGTCTTCATCTCTAGAGGCATTTCAGAGAATTCAATTGGAACTGGCTCGCAAAC
AAGCTGGTATAACAACAGAGAGCTTTGCATCCAGCTCTTCTGGAGAAGTTTCTGGTAGCT
CATCAAAGCTAACCACAGCATCAGCGACTGTTGGAAGTATAAGTTTGAAAGTGGAGAGTC
AGGTGAAACTTTCTGACACTGAGAAAAAAATTGCTGGAGAGAGGCAAAGCAAGGATACAA
TCAAGTCAGGTAGATCACCTCCACAAAATATGCCTTCATCTTCTGCAAAGAGTCGAAAAG
GATCACTGGAACCTATCTCTGAGGTAGAGAAGCATAATTTTAGGAAGGATAAGGAATTGC
CAGAAAACAAATTTGACAAGCTCAGGTCAACAGATACGGCAAAAAGGACTACAGTTCATA
CTGAGAAGGAGAAACAAAATGCAGCACCACGGAAGTCATTGGATGCCTGGAAAGAGAAAA
GAAACTGGGAAGATATACTGAAATCTCCTGTTCGGAGTTCTCGTGTCTCCCATTCCCCTG
GTGTTGGCAGAAAAGTACCAGAGCGTGCTCGTGTTCTACATGACAAGTTAATGTCTCCTG
AAAAGAAGAAAAGAAGTGCTTTGGACATGAAAAAGGAAGCAGAAGAAAAACATGCACGAG
CTTTACGAATCCGGAGTCAACTAGAAAGTGAGAGAGTTCAGAGGCTGCAACGTACCTCTG
AAAAGTTAAATCGTGTCAATGAATGGCAGGCTGTGCGCAGCTCAAAACTGCGAGAAGTAA
TGAATGCACGCCACCAACGTAGTGAATCTCGTCATGAGGCATACCTTGCCCAGGTTGCAA
AAAGAGCTGGTGATGAGAGTACTAAGGTCAATGAGGTCCGTTTTATTACATCACTAAATG
AAGAAAACAAGAAATTCTTACTGAGGCAGAAACTTCATGGTTCTGAAATGCGGAGAGCTG
AAAAGCTACTGGTGATCAAAACAAAGCAAAAGGAGGACATTGCAAGGGAAGAAGCTGTAT
TGGAACGGAGAAAAATTCTTGAAGCTGAGAAGATGCAACGTCTTGCTGAAATACAGCGTA
AGAAAGAAGAAGCTATTATCAGAAGAGAAGAGGAGCGCAAAGCATCTAGTGCTGCACGAG
AAGCGAGGGCTGCAGAGCAGCAACGTAGAAAAGAGATAAGAGCAAAAGCTCAACAAGAAG
AGGCTGAACTGTTAGCCCAAAAATTAGCAGAGAAGCTTCGTGAAAGTGAGCAGCGCCGTA
AGTATTACCTTGAGCAGATACGTGAGAGAGCTTCAATGGATTTCAGGGATCAGCCTTCAC
CTTTTCAGCGCCGCTTTCCAAGTAAAGATAACCAAAATCGTTCTAGCTCAGCTAATAGTG
GAGAAGATTCACAAATAATAAGCAGTGCCAACACTGCTGAGTCTGGTGTTAAATCATTCA
ACTCCACGCAATTGAAACGAAGGATTAAAAAGATACGCCAGAGGTTAATGGCTCTTAAGC
ATGATTTTGTTGAACCACTCATAGGTGAAAATACAGGAATTGTGCACAGGTCTGCTCTAG
GTACTGCAAAAGCTAAGTTAAGTAGATGGCTTCAGGACTTGCAAAGACTTCGTCAAGCTA
GAAAAGAGGGTGCTGCGAGTATTGGTTTGATTGTTAGTGACATTACAAAGGTACTTCTTG
TTTGTTCCATATTGTGTTGTAATAAAGATGTTTACTAATACCACTTTCTTTTTATTTTGG
CACAGTATTTAGAAGGAAAGGATCTTGAATTACATGCA

consensusID : consensus_9871#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 840
fasta sequence 
                              [TGTATCGTAACGGAGAAAAATTCTTGAAGCTGAGAAGATGCAACGTCTTGCTGAAATACAGCGTAAGAAAGAAGAAGCTCTTATTAGAAGAGAAGAGGAGCGCAAAGCATCTAGTGCTGCACGAGAAGCGAGGGCTGCAGAGCAGCAACGTAGAAAAGAGATAAGAGCAAAAGCTCAACAAGAAGAGGCTGAACTGTTAGCCCAAAAATTAGCAGAGAAGCTTCGTGAAAGTGAGCAGCGCCGTAAGTATTACCTTGAGCAGATACGTGAGAGAGCTTCAATGGATTTCAGGGATCAGCCTTCACCTTTTCAGCGCCGCTTTCCAAGTAAAGATAACCAAAATCGTTCTAGCTCAGCTAATAGTGGAGAAGATTCACAAATAATAAGCAGTGCCAACGCTGCTGAGTCTGGTGTTAAATCATTCAATTCCACGCAAATGAAACGAAGGATTAAAAAGATACGCCAGAGGTTAATGGCTCTTAAGCATGATTTTGTTGAACCACTCATAGGCGAAAATACAGGAATTGTGCACAGGTCTGCTCTAGGTACTGCAAAAGCTAAGTTAAGTAGATGGCTTCAGGACTTGCAAAGACTTCGTCAAGCTAGAAAAGAGGGTGCTGCGAGTATTGGTTTGATTGTTAGTGACATGACAAAGTATTTAGAAGGAAAGGATCTTGAATTACATGCATCTAGACAAGTTGGCTTGCTTGATTTTATTGCATCTGCTTTACCTGCCTCTCACACTTCAAGGCCTGGAGCTTGTCAAGTCACTGTCTACCTACTACGACTGTTGAGAGTGTTGCTCTCGCTTCCAGCCAATCGAACTTATTTTCTTGTACA]

[+] EMBL CB676007             [TGTATCGTAACGGAGAAAAATTCTTGAAGCTGAGAAGATGCAACGTCTTGCTGAAATACAGCGTAAGAAAGAAGAAGCTCTTATTAGAAGAGAAGAGGAGCGCAAAGCATCTAGTGCTGCACGAGAAGCGAGGGCTGCAGAGCAGCAACGTAGAAAAGAGATAAGAGCAAAAGCTCAACAAGAAGAGGCTGAACTGTTAGCCCAAAAATTAGCAGAGAAGCTTCGTGAAAGTGAGCAGCGCCGTAAGTATTACCTTGAGCAGATACGTGAGAGAGCTTCAATGGATTTCAGGGATCAGCCTTCACCTTTTCAGCGCCGCTTTCCAAGTAAAGATAACCAAAATCGTTCTAGCTCAGCTAATAGTGGAGAAGATTCACAAATAATAAGCAGTGCCAACGCTGCTGAGTCTGGTGTTAAATCATTCAATTCCACGCAAATGAAACGAAGGATTAAAAAGATACGCCAGAGGTTAATGGCTCTTAAGCATGATTTTGTTGAACCACTCATAGGCGAAAATACAGGAATTGTGCACAGGTCTGCTCTAGGTACTGCAAAAGCTAAGTTAAGTAGATGGCTTCAGGACTTGCAAAGACTTCGTCAAGCTAGAAAAGAGGGTGCTGCGAGTATTGGTTTGATTGTTAGTGACATGACAAAGTATTTAGAAGGAAAGGATCTTGAATTACATGCATCTAGACAAGTTGGCTTGCTTGATTTTATTGCATCTGCTTTACCTGCCTCTCACACTTCAAGGCCTGGAGCTTGTCAAGTCACTGTCTACCTACTACGACTGTTGAGAGTGTTGCTCTCGCTTCCAGCCAATCGAACTTATTTTCTTGTACA]




>consensus_9871#1
TGTATCGTAACGGAGAAAAATTCTTGAAGCTGAGAAGATGCAACGTCTTGCTGAAATACA
GCGTAAGAAAGAAGAAGCTCTTATTAGAAGAGAAGAGGAGCGCAAAGCATCTAGTGCTGC
ACGAGAAGCGAGGGCTGCAGAGCAGCAACGTAGAAAAGAGATAAGAGCAAAAGCTCAACA
AGAAGAGGCTGAACTGTTAGCCCAAAAATTAGCAGAGAAGCTTCGTGAAAGTGAGCAGCG
CCGTAAGTATTACCTTGAGCAGATACGTGAGAGAGCTTCAATGGATTTCAGGGATCAGCC
TTCACCTTTTCAGCGCCGCTTTCCAAGTAAAGATAACCAAAATCGTTCTAGCTCAGCTAA
TAGTGGAGAAGATTCACAAATAATAAGCAGTGCCAACGCTGCTGAGTCTGGTGTTAAATC
ATTCAATTCCACGCAAATGAAACGAAGGATTAAAAAGATACGCCAGAGGTTAATGGCTCT
TAAGCATGATTTTGTTGAACCACTCATAGGCGAAAATACAGGAATTGTGCACAGGTCTGC
TCTAGGTACTGCAAAAGCTAAGTTAAGTAGATGGCTTCAGGACTTGCAAAGACTTCGTCA
AGCTAGAAAAGAGGGTGCTGCGAGTATTGGTTTGATTGTTAGTGACATGACAAAGTATTT
AGAAGGAAAGGATCTTGAATTACATGCATCTAGACAAGTTGGCTTGCTTGATTTTATTGC
ATCTGCTTTACCTGCCTCTCACACTTCAAGGCCTGGAGCTTGTCAAGTCACTGTCTACCT
ACTACGACTGTTGAGAGTGTTGCTCTCGCTTCCAGCCAATCGAACTTATTTTCTTGTACA

consensusID : consensus_9871#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 695
fasta sequence 
                              [TTGACTTGGAGAAGATCAACGGTCTGCCTGAAATCAGCTGTAAGAAAGAAGCAGCTATTATCAGAAGAGAAGAGGAGCGCAAAGCATCTAGTGCTGCGCGAGAACCTAGGGCTTCAGATCAGCACCGTAGAAAAGAGATAAGAGCAAAAGCTCACCAAGAAGAGGCTGAACTGTTAGCCCAAAAATTAGCAGAGAAGCTTCGTGAAAGTGAGCAGCGCCGTAAGTATTACCTTGAGCAGATCCGTGAGAGAGCTTCAATGGATTTCAGGGATCAGCCTTCACCTTTTAAGCGCCGCTTTCCAAGTAAAGATAACCAAAATCGTTCTAGCTCAGCTAATAGTGGAGAAGATTCCCAAATAATAAGCAGTGCCAACACTGCTGAGTCTGGTGTTAAATCATTCAACTCCACGCAATTGAAACGAAGGATTAAAAAGATACGCCAGAGGTTAATGGCTCTTAAGCATGATTTTGTTGAACCACTCATAGGTGAAAATACAGGAATTGTGCACAGGTCTGCTCTAGGTACTGCAAAAGCTAAGTTAAGTAGATGGCTTCAGGACTTGCAAAGACTTCGTCAAGCTAGAAAAGAGGGTGCTGCGAGTATTGGTTTGATTGTTAGTGACATTACAAAGGTACTTCTTGTTTGTTCCATATTGTGTTGTTGTGATAAAGATGTTTCCTAAAAAAAAAAAAAA]

[-] EMBL CA761620             [TTGACTTGGAGAAGATCAACGGTCTGCCTGAAATCAGCTGTAAGAAAGAAGCAGCTATTATCAGAAGAGAAGAGGAGCGCAAAGCATCTAGTGCTGCGCGAGAACCTAGGGCTTCAGATCAGCACCGTAGAAAAGAGATAAGAGCAAAAGCTCACCAAGAAGAGGCTGAACTGTTAGCCCAAAAATTAGCAGAGAAGCTTCGTGAAAGTGAGCAGCGCCGTAAGTATTACCTTGAGCAGATCCGTGAGAGAGCTTCAATGGATTTCAGGGATCAGCCTTCACCTTTTAAGCGCCGCTTTCCAAGTAAAGATAACCAAAATCGTTCTAGCTCAGCTAATAGTGGAGAAGATTCCCAAATAATAAGCAGTGCCAACACTGCTGAGTCTGGTGTTAAATCATTCAACTCCACGCAATTGAAACGAAGGATTAAAAAGATACGCCAGAGGTTAATGGCTCTTAAGCATGATTTTGTTGAACCACTCATAGGTGAAAATACAGGAATTGTGCACAGGTCTGCTCTAGGTACTGCAAAAGCTAAGTTAAGTAGATGGCTTCAGGACTTGCAAAGACTTCGTCAAGCTAGAAAAGAGGGTGCTGCGAGTATTGGTTTGATTGTTAGTGACATTACAAAGGTACTTCTTGTTTGTTCCATATTGTGTTGTTGTGATAAAGATGTTTCCTAAAAAAAAAAAAAA]




>consensus_9871#2
TTGACTTGGAGAAGATCAACGGTCTGCCTGAAATCAGCTGTAAGAAAGAAGCAGCTATTA
TCAGAAGAGAAGAGGAGCGCAAAGCATCTAGTGCTGCGCGAGAACCTAGGGCTTCAGATC
AGCACCGTAGAAAAGAGATAAGAGCAAAAGCTCACCAAGAAGAGGCTGAACTGTTAGCCC
AAAAATTAGCAGAGAAGCTTCGTGAAAGTGAGCAGCGCCGTAAGTATTACCTTGAGCAGA
TCCGTGAGAGAGCTTCAATGGATTTCAGGGATCAGCCTTCACCTTTTAAGCGCCGCTTTC
CAAGTAAAGATAACCAAAATCGTTCTAGCTCAGCTAATAGTGGAGAAGATTCCCAAATAA
TAAGCAGTGCCAACACTGCTGAGTCTGGTGTTAAATCATTCAACTCCACGCAATTGAAAC
GAAGGATTAAAAAGATACGCCAGAGGTTAATGGCTCTTAAGCATGATTTTGTTGAACCAC
TCATAGGTGAAAATACAGGAATTGTGCACAGGTCTGCTCTAGGTACTGCAAAAGCTAAGT
TAAGTAGATGGCTTCAGGACTTGCAAAGACTTCGTCAAGCTAGAAAAGAGGGTGCTGCGA
GTATTGGTTTGATTGTTAGTGACATTACAAAGGTACTTCTTGTTTGTTCCATATTGTGTT
GTTGTGATAAAGATGTTTCCTAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9871#0      CTAGCCTCCCTAAAACGAAAAAAAAAGGAAAAAAAAAGAAAAAAAAAAACTGCGGCGAGC 60
consensus_9871#2      ------------------------------------------------------------
consensus_9871#1      ------------------------------------------------------------
                                                                                  

consensus_9871#0      CGGAGACGTGGCTCCCCGACTCCTCGCGCGCGCGGCCGGCGGCGAGAAGGGCGGCGGCGG 120
consensus_9871#2      ------------------------------------------------------------
consensus_9871#1      ------------------------------------------------------------
                                                                                  

consensus_9871#0      CGGCGGGGAAGGCCATCCTCCCCTCATGAGCGGCGTGGCCTCCTCGCGCGCGCGTCGGGG 180
consensus_9871#2      ------------------------------------------------------------
consensus_9871#1      ------------------------------------------------------------
                                                                                  

consensus_9871#0      GAGCAGGCAGGTCTGGAGGGGCGACGCCGCCGACGACATCCTTCCGTCTCGGTTCGGATC 240
consensus_9871#2      ------------------------------------------------------------
consensus_9871#1      ------------------------------------------------------------
                                                                                  

consensus_9871#0      GGATTGAAGGAATGCCATGAGGAACCACTGAGGATTTATTGGTGGTAATGGAGAATGATC 300
consensus_9871#2      ------------------------------------------------------------
consensus_9871#1      ------------------------------------------------------------
                                                                                  

consensus_9871#0      ATGGAGATCTAGATGATGTGGGATCGGGGTGGCTTGAAGTGAAAAAAAAACACCGATCCA 360
consensus_9871#2      ------------------------------------------------------------
consensus_9871#1      ------------------------------------------------------------
                                                                                  

consensus_9871#0      GCTCAAAATTCACACTGCAGAGGTCTTCAGGAGGTTCCAATGATAATAAAATTTCAAACT 420
consensus_9871#2      ------------------------------------------------------------
consensus_9871#1      ------------------------------------------------------------
                                                                                  

consensus_9871#0      CGTCCTCACAATCTCAGACCAACTTTGGCAGTGATAGTGCAAAGTGGTGCGACAGGTTAC 480
consensus_9871#2      ------------------------------------------------------------
consensus_9871#1      ------------------------------------------------------------
                                                                                  

consensus_9871#0      AATGCCCACCTCAGATCACAAAGGTTAATGTTTGCGTTAATGAACCGGGTAGCGTAGTCA 540
consensus_9871#2      ------------------------------------------------------------
consensus_9871#1      ------------------------------------------------------------
                                                                                  

consensus_9871#0      CGATGGTTGTTCATGATGAAGAATGTGCTCATGCAGATGTTACCAACCTGAAGAGTGAAT 600
consensus_9871#2      ------------------------------------------------------------
consensus_9871#1      ------------------------------------------------------------
                                                                                  

consensus_9871#0      TAAGTGTTTCAGACTTGGAGCATGCAATAGAAAAACCTAAAAAACTGCTAGTGACTGAAG 660
consensus_9871#2      ------------------------------------------------------------
consensus_9871#1      ------------------------------------------------------------
                                                                                  

consensus_9871#0      AAATAAGTGAACCTCCCAACGTTGGTAAGATTGATTGTGCTGTTTCTCTAACTCCACATC 720
consensus_9871#2      ------------------------------------------------------------
consensus_9871#1      ------------------------------------------------------------
                                                                                  

consensus_9871#0      AATCCTCCAACTGTTCAAGTGGTCTTGCAAAATCTTCAGGTCTTTATGATCATGTTAAAG 780
consensus_9871#2      ------------------------------------------------------------
consensus_9871#1      ------------------------------------------------------------
                                                                                  

consensus_9871#0      GCCCTCCAATGACAGATAGTATAGGTGTTTTATCGAACACTTCTGTCAGGTTTGGTGATT 840
consensus_9871#2      ------------------------------------------------------------
consensus_9871#1      ------------------------------------------------------------
                                                                                  

consensus_9871#0      TTGATGAAGTGCCAGGTCTAGCATTACCTGCAGATGCGTGTAGAAATAATAGTTCATCTC 900
consensus_9871#2      ------------------------------------------------------------
consensus_9871#1      ------------------------------------------------------------
                                                                                  

consensus_9871#0      AAAAACACATACACATTGGCGATGCTACAGAATTCATAAATGAATGTAAAGATGAAAGTG 960
consensus_9871#2      ------------------------------------------------------------
consensus_9871#1      ------------------------------------------------------------
                                                                                  

consensus_9871#0      AACTTAAAACTGAGCCGAATTTTTGTAAAACAATTGTTGAGACATCTCCTGTTATTATTC 1020
consensus_9871#2      ------------------------------------------------------------
consensus_9871#1      ------------------------------------------------------------
                                                                                  

consensus_9871#0      AAGGGGCAGAAACGCCCACTGAAGATGAGAGCAAGGTATTGGATATATGTGAAATAACAG 1080
consensus_9871#2      ------------------------------------------------------------
consensus_9871#1      ------------------------------------------------------------
                                                                                  

consensus_9871#0      ATAATCGTTTGGATGTTAGTGGTTCACCTTCCTTGGACGACACAGTCTCCTTGTCCTGTG 1140
consensus_9871#2      ------------------------------------------------------------
consensus_9871#1      ------------------------------------------------------------
                                                                                  

consensus_9871#0      CAAACAATGATCTTGAAGTTCCAGTTAAGTCGTCTTCTGTTGCTTCAACAGAAAGCCAGA 1200
consensus_9871#2      ------------------------------------------------------------
consensus_9871#1      ------------------------------------------------------------
                                                                                  

consensus_9871#0      CAGTTCTTCATGCACCAACTTCAGCAGATTTTGGAGGTGAAACTGCTGGAAGCAAAGAAA 1260
consensus_9871#2      ------------------------------------------------------------
consensus_9871#1      ------------------------------------------------------------
                                                                                  

consensus_9871#0      GGTTCAGGCAGAGACTCTGGTGTTTTCTTTTTGAGAATCTGAATAGGGCTGTGGATGAAC 1320
consensus_9871#2      ------------------------------------------------------------
consensus_9871#1      ------------------------------------------------------------
                                                                                  

consensus_9871#0      TTTACCTCCTCTGTGAGTTAGAATGTGACATGGAGCAAATTAATGAATCCATCCTTGTTC 1380
consensus_9871#2      ------------------------------------------------------------
consensus_9871#1      ------------------------------------------------------------
                                                                                  

consensus_9871#0      TTGAAGAAGCTATATCTGATTTTCAAGAACTGAAATCCAGGGCGGAGCATTTTGATAACA 1440
consensus_9871#2      ------------------------------------------------------------
consensus_9871#1      ------------------------------------------------------------
                                                                                  

consensus_9871#0      CCAAAAAATCTACTGCTCTACCAAAGGAGGGGATGCCAATGGCTGTGAAAGCTGACCATC 1500
consensus_9871#2      ------------------------------------------------------------
consensus_9871#1      ------------------------------------------------------------
                                                                                  

consensus_9871#0      GAAGACCACATGCCTTGTCTTGGGAGGTCAGAAGGATGACAAGTTCACCACACAGGCAAG 1560
consensus_9871#2      ------------------------------------------------------------
consensus_9871#1      ------------------------------------------------------------
                                                                                  

consensus_9871#0      AGATATTGTCTTCATCTCTAGAGGCATTTCAGAGAATTCAATTGGAACTGGCTCGCAAAC 1620
consensus_9871#2      ------------------------------------------------------------
consensus_9871#1      ------------------------------------------------------------
                                                                                  

consensus_9871#0      AAGCTGGTATAACAACAGAGAGCTTTGCATCCAGCTCTTCTGGAGAAGTTTCTGGTAGCT 1680
consensus_9871#2      ------------------------------------------------------------
consensus_9871#1      ------------------------------------------------------------
                                                                                  

consensus_9871#0      CATCAAAGCTAACCACAGCATCAGCGACTGTTGGAAGTATAAGTTTGAAAGTGGAGAGTC 1740
consensus_9871#2      ------------------------------------------------------------
consensus_9871#1      ------------------------------------------------------------
                                                                                  

consensus_9871#0      AGGTGAAACTTTCTGACACTGAGAAAAAAATTGCTGGAGAGAGGCAAAGCAAGGATACAA 1800
consensus_9871#2      ------------------------------------------------------------
consensus_9871#1      ------------------------------------------------------------
                                                                                  

consensus_9871#0      TCAAGTCAGGTAGATCACCTCCACAAAATATGCCTTCATCTTCTGCAAAGAGTCGAAAAG 1860
consensus_9871#2      ------------------------------------------------------------
consensus_9871#1      ------------------------------------------------------------
                                                                                  

consensus_9871#0      GATCACTGGAACCTATCTCTGAGGTAGAGAAGCATAATTTTAGGAAGGATAAGGAATTGC 1920
consensus_9871#2      ------------------------------------------------------------
consensus_9871#1      ------------------------------------------------------------
                                                                                  

consensus_9871#0      CAGAAAACAAATTTGACAAGCTCAGGTCAACAGATACGGCAAAAAGGACTACAGTTCATA 1980
consensus_9871#2      ------------------------------------------------------------
consensus_9871#1      ------------------------------------------------------------
                                                                                  

consensus_9871#0      CTGAGAAGGAGAAACAAAATGCAGCACCACGGAAGTCATTGGATGCCTGGAAAGAGAAAA 2040
consensus_9871#2      ------------------------------------------------------------
consensus_9871#1      ------------------------------------------------------------
                                                                                  

consensus_9871#0      GAAACTGGGAAGATATACTGAAATCTCCTGTTCGGAGTTCTCGTGTCTCCCATTCCCCTG 2100
consensus_9871#2      ------------------------------------------------------------
consensus_9871#1      ------------------------------------------------------------
                                                                                  

consensus_9871#0      GTGTTGGCAGAAAAGTACCAGAGCGTGCTCGTGTTCTACATGACAAGTTAATGTCTCCTG 2160
consensus_9871#2      ------------------------------------------------------------
consensus_9871#1      ------------------------------------------------------------
                                                                                  

consensus_9871#0      AAAAGAAGAAAAGAAGTGCTTTGGACATGAAAAAGGAAGCAGAAGAAAAACATGCACGAG 2220
consensus_9871#2      ------------------------------------------------------------
consensus_9871#1      ------------------------------------------------------------
                                                                                  

consensus_9871#0      CTTTACGAATCCGGAGTCAACTAGAAAGTGAGAGAGTTCAGAGGCTGCAACGTACCTCTG 2280
consensus_9871#2      ------------------------------------------------------------
consensus_9871#1      ------------------------------------------------------------
                                                                                  

consensus_9871#0      AAAAGTTAAATCGTGTCAATGAATGGCAGGCTGTGCGCAGCTCAAAACTGCGAGAAGTAA 2340
consensus_9871#2      ------------------------------------------------------------
consensus_9871#1      ------------------------------------------------------------
                                                                                  

consensus_9871#0      TGAATGCACGCCACCAACGTAGTGAATCTCGTCATGAGGCATACCTTGCCCAGGTTGCAA 2400
consensus_9871#2      ------------------------------------------------------------
consensus_9871#1      ------------------------------------------------------------
                                                                                  

consensus_9871#0      AAAGAGCTGGTGATGAGAGTACTAAGGTCAATGAGGTCCGTTTTATTACATCACTAAATG 2460
consensus_9871#2      ------------------------------------------------------------
consensus_9871#1      ------------------------------------------------------------
                                                                                  

consensus_9871#0      AAGAAAACAAGAAATTCTTACTGAGGCAGAAACTTCATGGTTCTGAAATGCGGAGAGCTG 2520
consensus_9871#2      ------------------------------------------------------------
consensus_9871#1      ------------------------------------------------------------
                                                                                  

consensus_9871#0      AAAAGCTACTGGTGATCAAAACAAAGCAAAAGGAGGACATTGCAAGGGAAGAAGCTGTAT 2580
consensus_9871#2      ------------------------------------------------------------
consensus_9871#1      -------------------------------------------------------TGTAT 5
                                                                                  

consensus_9871#0      TGGAACGGAGAAAAATTCTTGAAGCTGAGAAGATGCAACGTCTTGCTGAAATACAGCGTA 2640
consensus_9871#2      ------------------TTGACTTGGAGAAGATCAACGGTCTGCCTGAAATCAGCTGTA 42
consensus_9871#1      CGTAACGGAGAAAAATTCTTGAAGCTGAGAAGATGCAACGTCTTGCTGAAATACAGCGTA 65
                                        ****    ********  *  ****  *******     ***

consensus_9871#0      AGAAAGAAGAAGCTATTATCAGAAGAGAAGAGGAGCGCAAAGCATCTAGTGCTGCACGAG 2700
consensus_9871#2      AGAAAGAAGCAGCTATTATCAGAAGAGAAGAGGAGCGCAAAGCATCTAGTGCTGCGCGAG 102
consensus_9871#1      AGAAAGAAGAAGCTCTTATTAGAAGAGAAGAGGAGCGCAAAGCATCTAGTGCTGCACGAG 125
                      ********* **** **** *********************************** ****

consensus_9871#0      AAGCGAGGGCTGCAGAGCAGCAACGTAGAAAAGAGATAAGAGCAAAAGCTCAACAAGAAG 2760
consensus_9871#2      AACCTAGGGCTTCAGATCAGCACCGTAGAAAAGAGATAAGAGCAAAAGCTCACCAAGAAG 162
consensus_9871#1      AAGCGAGGGCTGCAGAGCAGCAACGTAGAAAAGAGATAAGAGCAAAAGCTCAACAAGAAG 185
                      ** * ****** **** ***** ***************************** *******

consensus_9871#0      AGGCTGAACTGTTAGCCCAAAAATTAGCAGAGAAGCTTCGTGAAAGTGAGCAGCGCCGTA 2820
consensus_9871#2      AGGCTGAACTGTTAGCCCAAAAATTAGCAGAGAAGCTTCGTGAAAGTGAGCAGCGCCGTA 222
consensus_9871#1      AGGCTGAACTGTTAGCCCAAAAATTAGCAGAGAAGCTTCGTGAAAGTGAGCAGCGCCGTA 245
                      ************************************************************

consensus_9871#0      AGTATTACCTTGAGCAGATACGTGAGAGAGCTTCAATGGATTTCAGGGATCAGCCTTCAC 2880
consensus_9871#2      AGTATTACCTTGAGCAGATCCGTGAGAGAGCTTCAATGGATTTCAGGGATCAGCCTTCAC 282
consensus_9871#1      AGTATTACCTTGAGCAGATACGTGAGAGAGCTTCAATGGATTTCAGGGATCAGCCTTCAC 305
                      ******************* ****************************************

consensus_9871#0      CTTTTCAGCGCCGCTTTCCAAGTAAAGATAACCAAAATCGTTCTAGCTCAGCTAATAGTG 2940
consensus_9871#2      CTTTTAAGCGCCGCTTTCCAAGTAAAGATAACCAAAATCGTTCTAGCTCAGCTAATAGTG 342
consensus_9871#1      CTTTTCAGCGCCGCTTTCCAAGTAAAGATAACCAAAATCGTTCTAGCTCAGCTAATAGTG 365
                      ***** ******************************************************

consensus_9871#0      GAGAAGATTCACAAATAATAAGCAGTGCCAACACTGCTGAGTCTGGTGTTAAATCATTCA 3000
consensus_9871#2      GAGAAGATTCCCAAATAATAAGCAGTGCCAACACTGCTGAGTCTGGTGTTAAATCATTCA 402
consensus_9871#1      GAGAAGATTCACAAATAATAAGCAGTGCCAACGCTGCTGAGTCTGGTGTTAAATCATTCA 425
                      ********** ********************* ***************************

consensus_9871#0      ACTCCACGCAATTGAAACGAAGGATTAAAAAGATACGCCAGAGGTTAATGGCTCTTAAGC 3060
consensus_9871#2      ACTCCACGCAATTGAAACGAAGGATTAAAAAGATACGCCAGAGGTTAATGGCTCTTAAGC 462
consensus_9871#1      ATTCCACGCAAATGAAACGAAGGATTAAAAAGATACGCCAGAGGTTAATGGCTCTTAAGC 485
                      * ********* ************************************************

consensus_9871#0      ATGATTTTGTTGAACCACTCATAGGTGAAAATACAGGAATTGTGCACAGGTCTGCTCTAG 3120
consensus_9871#2      ATGATTTTGTTGAACCACTCATAGGTGAAAATACAGGAATTGTGCACAGGTCTGCTCTAG 522
consensus_9871#1      ATGATTTTGTTGAACCACTCATAGGCGAAAATACAGGAATTGTGCACAGGTCTGCTCTAG 545
                      ************************* **********************************

consensus_9871#0      GTACTGCAAAAGCTAAGTTAAGTAGATGGCTTCAGGACTTGCAAAGACTTCGTCAAGCTA 3180
consensus_9871#2      GTACTGCAAAAGCTAAGTTAAGTAGATGGCTTCAGGACTTGCAAAGACTTCGTCAAGCTA 582
consensus_9871#1      GTACTGCAAAAGCTAAGTTAAGTAGATGGCTTCAGGACTTGCAAAGACTTCGTCAAGCTA 605
                      ************************************************************

consensus_9871#0      GAAAAGAGGGTGCTGCGAGTATTGGTTTGATTGTTAGTGACATTACAAAGGTACTTCTTG 3240
consensus_9871#2      GAAAAGAGGGTGCTGCGAGTATTGGTTTGATTGTTAGTGACATTACAAAGGTACTTCTTG 642
consensus_9871#1      GAAAAGAGGGTGCTGCGAGTATTGGTTTGATTGTTAGTGACATGACAAAG-TATTTAGAA 664
                      ******************************************* ****** ** **    

consensus_9871#0      ---------TTTGTTCCATATTGTGTTGT---AATAAAGATGTTTACTAATACCACTTTC 3288
consensus_9871#2      ---------TTTGTTCCATATTGTGTTGTTGTGATAAAGATGTTTCCTAAAAAAAAAAAA 693
consensus_9871#1      GGAAAGGATCTTGAATTACATGCATCTAGACAAGTTGGCTTGCTTGATTTTATTGCATCT 724
                                ***    * **     *       *     ** **  *   *        

consensus_9871#0      TTTTTATTTTGGCACAGTATTTAGAAGG--AAAGGATCTTGAATTAC-ATGCA------- 3338
consensus_9871#2      AA---------------------------------------------------------- 695
consensus_9871#1      GCTTTACCTGCCTCTCACACTTCAAGGCCTGGAGCTTGTCAAGTCACTGTCTACCTACTA 784
                                                                                  

consensus_9871#0      --------------------------------------------------------
consensus_9871#2      --------------------------------------------------------
consensus_9871#1      CGACTGTTGAGAGTGTTGCTCTCGCTTCCAGCCAATCGAACTTATTTTCTTGTACA 840


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)