cluster # 9877

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Oryza sativa
cluster # 9877 cluster # 9877 Sequences # 7 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9877#0 length = 859 sequences # 4
consensus_9877#1 length = 751 sequences # 1

consensus_9877#2 length = 686 sequences # 1
consensus_9877#3 length = 572 sequences # 1

consensusID : consensus_9877#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 859
fasta sequence

                              [AAATTCAGTATATTTGTCCTTTCATTTGTTTTGACTTCAGTATCGGAAAATTGCATCTATTTGTAAATTTAAATTTATTTGCAAAAGGTAAATACAATGTTAGGCATTATGGCAGGATGAACAGAGAATTAATGGATTGACACTGTTATTTTCTACTCCATATGTAGATTCCGGTTGCTATTACTACACCACCTAATGCTCCAATGGATGCCAAAATTTTCATCTTTGAAGCACCTTGCTTAGTCACTGGTAATACCAGTAAACTTTCTATCTCGATTGGTTGTTCCCAATTTTTCTTTATTCCAGAAACATGCCCTTTTCCTACAACTGCCACCACCGAGGAATGTTCCTTTGCTACCTTCAATAATTTGGAGGACATATACATATCACGTTCATGTAGGAGTGTCTCCATCAAGGTAGGAAATGCCTTACTCATCTCTTGAATAACAAGTGTTAGCATGTCAACATCCTCCATGTCCTTCAGCATTTTATTAAGTTCCTCCGGGCTTGGTAAAAATATGGACTGGAAAACAATGTAGTACAAAAACTTTGCCCTGTGCCATAATGACATTCTCCCCCAAGTCCTTCTCAAAGTGATCTGGACAGGGCGATCTCCAAGGATAACTTTGCCGCCATAACTCATTGCTTCCTCAAATGCCACTCGGAATTCGGCCCCAGGTAACACATCAAGTTGGCTAGCAACCTTTGCAAGAAACCAGCTGTAGAGTATTCCAAAAGTGTTCATCTTCTTTTTCTTCCACATGTCAATCATTTCGTTCATGGTAGGAACCTGAAGGTTTTGTGGTGTCAGAATGGCGACTCTGCTGGCACAGAGCTCCAAGAAAACAGCCTGAGGTTT]

[+] EMBL CB665109             [AAATTCAGTATATTTGTCCTTTCATTTGTTTTGACTTCAGTATCGGAAAATTGCATCTATTTGTAAATTTAAATTTATTTGCAAAAGGTAAATACAATGTTAGGCATTATGGCAGGATGAACAGAGAATTAATGGATTGACACTGTTATTTTCTACTCCATATGTAGATTCCGGTTGCTATTACTACACCACCTAATGCTCCAATGGATGCCAAAATTTTCATCTTTGAAGCACCTTGCTTAGTCACTGGTAATACCAGTAAACTTTCTATCTCGATTGGTTGTTCCCAATTTTTCTTTATTCCAGAAACATGCCCTTTTCCTACAACTGCCACCACCGAGGAATGTTCCTTTGCTACCTTCAATAATTTGGAGGACATATACATATCACGTTCATGTAGGAGTGTCTCCATCAAGGTAGGAAATGCCTTACTCATCTCTTGAATAACAAGTGTTAGCATGTCAACATCCTCCATGTCCTTCAGCATTTTATTAAGTTCCTCCGGGCTTGGTAAAAATATGGACTGGAAAACAATGTAGTACAAAAACTTTGCCCTGTGCCATAATGACATTCTCCCCCAAGTCCTTCTCAAAGTGATCTGGACAGGGCGATCTCCAAGGATAACTTTGCCGCCATAACTCATTGCTTCCTCAAATGCCACTCGGAATTCGGCCCCAGGTAACACATCAAGTTGGCTAGCAACCTTTGCAAGAAACCAGCTGTAGAGTATTCCAAAAGTGTTCATCTTCTTTTTCTTCCACATGTCAATCATTTCGTTCATGGTAGGAACC                                                                    ]
[+] EMBL CB644584             [        TATATTTGTCCTTTCATTTGTTTTGACTTCAGTATCGGAAAATTGCATCTATTTGTAAATTTAAATTTATTTGCAAAAGGTAAATACAATGTTAGGCATTATGGCAGGATGAACAGAGAATTAATGGATTGACACTGTTATTTTCTACTCCATATGTAAATTCCGGTTGCTATTACTACACCACCTAATGCTCCAATGGATGCCAAAATTTTCATCTTTGAAGCACCTTGCTTAGTCACTGGTAATACCAGTAAACTTTCTATCTCGATTGGTTGTTCCCAATTTTTCTTTATTCCAAAAACATGCCCTTTTCCTACAACTGCCACCACCGAGGAATGTTCCTTTGCTACCTTCAATAATTTGGAGGACATATACATATCACGTTCATGTAGGAGTGTCTCCATCAAGGTAGGAAATGCCTTACTCATCTCTTGAATAACAAGTGTTAGCATGTCAACATCCTCCATGTCCTTCAGCATTTTATTAAGTTCCTCCGGGCTTGGTAAAAATATGGACTGGAAAACAATGTAGTACAAAAACTTTGCCCTGTGCCATAATGACATTCTCCCCCAAGTCCTTCTCAAAGTGATCTGGACAGGGCGATCTCCAAGGATAACTTTGCCGCCATAACTCATTGCTTCCTCAAATGCCACTCGGAATTCGGCCCCAGGTAACACATCAAGTTGGCTAGCAACCTTTGCAAGAAACCAGCTGTAGAGTATTCCAAAAGTGTTCATC                                                                                                                 ]
[+] EMBL CB682098             [                                                                                                                                                                                                                                                                                                                                                             cgTTGCTACCTTCAATAATTTGGAGGACATATACATATCACGTTCATGTAGGAGTGTCTCCATCAAGGTAGGAAATGCCTTACTCATCTCTTGAATAACAAGTGTTAGCATGTCAACATCCTCCATGTCCTTCAGCATTTTATTAAGTTCCTCCGGGCTTGGTAAAAATATGGACTGGAAAACAATGTAGTACAAAAACTTTGCCCTGTGCCATAATGACATTCTCCCCCAAGTCCTTCTCAAAGTGATCTGGACAGGGCGATCTCCAAGGATAACTTTGCCGCCATAACTCATTGCTTCCTCAAATGCCACTCGGAATTCGGCCCCAGGTAACACATCAAGTTGGCTAGCAACCTTTGCAAGAAACCAGCTGTAGAGTATTCCAAAAGTGTTCATCTTCTTTTTCTTCCACATGTCAATC                                                                                         ]
[-] EMBL CF196430             [                                                                                                                                                                                                                                                                                                                                                                                                       TTCATNTAGGAGNNTCTCCATCAAGGTAGGAAATGCCTTACTCATCTCTTGAATAACAAGTGTTAGCATGTCAACATCCTCCATGTCCTTCAGCATTTTATTAAGTTCCTCCGGGCTTGGTAAAAATATGGACTGGAAAACAATGTAGTACAAAAACTTTGCCCTGTGCCATAATGACATTCTCCCCCAAGTCCTTCTCAAAGTGATCTGGACAGGGCGATCTCCAAGGATAACTTTGCCGCCATAACTCATTGCTTCCTCAAATGCCACTCGGAATTCGGCCCCAGGTAACACATCAAGTTGGCTAGCAACCTTTGCAAGAAACCAGCTGTAGAGTATTCCAAAAGTGTTCATCTTCTTTTTCTTCCACATGTCAATCATTTCGTTCATGGTAGGAACCTGAAGGTTTTGTGGTGTCAGAATGGCGACTCTGCTGGCACAGAGCTCCAAGAAAACAGCCTGAGGTTT]




>consensus_9877#0
AAATTCAGTATATTTGTCCTTTCATTTGTTTTGACTTCAGTATCGGAAAATTGCATCTAT
TTGTAAATTTAAATTTATTTGCAAAAGGTAAATACAATGTTAGGCATTATGGCAGGATGA
ACAGAGAATTAATGGATTGACACTGTTATTTTCTACTCCATATGTAGATTCCGGTTGCTA
TTACTACACCACCTAATGCTCCAATGGATGCCAAAATTTTCATCTTTGAAGCACCTTGCT
TAGTCACTGGTAATACCAGTAAACTTTCTATCTCGATTGGTTGTTCCCAATTTTTCTTTA
TTCCAGAAACATGCCCTTTTCCTACAACTGCCACCACCGAGGAATGTTCCTTTGCTACCT
TCAATAATTTGGAGGACATATACATATCACGTTCATGTAGGAGTGTCTCCATCAAGGTAG
GAAATGCCTTACTCATCTCTTGAATAACAAGTGTTAGCATGTCAACATCCTCCATGTCCT
TCAGCATTTTATTAAGTTCCTCCGGGCTTGGTAAAAATATGGACTGGAAAACAATGTAGT
ACAAAAACTTTGCCCTGTGCCATAATGACATTCTCCCCCAAGTCCTTCTCAAAGTGATCT
GGACAGGGCGATCTCCAAGGATAACTTTGCCGCCATAACTCATTGCTTCCTCAAATGCCA
CTCGGAATTCGGCCCCAGGTAACACATCAAGTTGGCTAGCAACCTTTGCAAGAAACCAGC
TGTAGAGTATTCCAAAAGTGTTCATCTTCTTTTTCTTCCACATGTCAATCATTTCGTTCA
TGGTAGGAACCTGAAGGTTTTGTGGTGTCAGAATGGCGACTCTGCTGGCACAGAGCTCCA
AGAAAACAGCCTGAGGTTT

consensusID : consensus_9877#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 751
fasta sequence

                              [NATCTATTTGTAAATTTAAATTTATTTGCAAAAGGTAAATACAATGTTAGGCATTATGGCAGGATGAACAGAGAATTAATGGATTGACACTGTTATTTTCTACTCCATATGTAAATTCCGGTTGCTATTACTACACCACCTAATGCTCCAATGGATGCCAAAATTTTCATCTTTGAAGCACCTTGCTTAGTCACTGGTAATACCAGTAAACTTTCTATCTCGATTGGTTGTTCCCAATTTTTCTTTATTCCAGAAACATGCCCTTTTCCTACAACTGCCACCACCGAGGAATGTTCCTTTGCTACCTTCAATAATTTGGAGGACATATACATATCACGTTCATGTAGGAGTGTCTCCATCAAGGTAGGAAATGCCTTACTCATCTCTTGAATAACAAGTGTTAGCATGTCAACATCCTCCATGTCCTTCAGCATTTTATTAAGTTCCTCCGGGCTTGGTAAAAATATGGACTGGAAAACAATGTAGTACAAAAACTTTGCCCTGTGCCATAATGACATTCTCCCCCAAGTCCTTCTCAAAGTGATCTTAAATTGGCACAGCCAGTCAGCTGTTATGAATATCCTCTCCCTTCTTCTTCTTGCATCTATCTATAACCTGTATGGAGGTTATAGACAACCAAATTCAACCACTAGATAAGTAGGTTGCATACCTGGACAGGGCGATCTCCAAGGATAACTTTGCCGCCATAACTCATTGCTTCCTCAAATGCCACTCGGGAATTCGGCCCCAG]

[+] EMBL CB652007             [NATCTATTTGTAAATTTAAATTTATTTGCAAAAGGTAAATACAATGTTAGGCATTATGGCAGGATGAACAGAGAATTAATGGATTGACACTGTTATTTTCTACTCCATATGTAAATTCCGGTTGCTATTACTACACCACCTAATGCTCCAATGGATGCCAAAATTTTCATCTTTGAAGCACCTTGCTTAGTCACTGGTAATACCAGTAAACTTTCTATCTCGATTGGTTGTTCCCAATTTTTCTTTATTCCAGAAACATGCCCTTTTCCTACAACTGCCACCACCGAGGAATGTTCCTTTGCTACCTTCAATAATTTGGAGGACATATACATATCACGTTCATGTAGGAGTGTCTCCATCAAGGTAGGAAATGCCTTACTCATCTCTTGAATAACAAGTGTTAGCATGTCAACATCCTCCATGTCCTTCAGCATTTTATTAAGTTCCTCCGGGCTTGGTAAAAATATGGACTGGAAAACAATGTAGTACAAAAACTTTGCCCTGTGCCATAATGACATTCTCCCCCAAGTCCTTCTCAAAGTGATCTTAAATTGGCACAGCCAGTCAGCTGTTATGAATATCCTCTCCCTTCTTCTTCTTGCATCTATCTATAACCTGTATGGAGGTTATAGACAACCAAATTCAACCACTAGATAAGTAGGTTGCATACCTGGACAGGGCGATCTCCAAGGATAACTTTGCCGCCATAACTCATTGCTTCCTCAAATGCCACTCGGGAATTCGGCCCCAG]




>consensus_9877#1
NATCTATTTGTAAATTTAAATTTATTTGCAAAAGGTAAATACAATGTTAGGCATTATGGC
AGGATGAACAGAGAATTAATGGATTGACACTGTTATTTTCTACTCCATATGTAAATTCCG
GTTGCTATTACTACACCACCTAATGCTCCAATGGATGCCAAAATTTTCATCTTTGAAGCA
CCTTGCTTAGTCACTGGTAATACCAGTAAACTTTCTATCTCGATTGGTTGTTCCCAATTT
TTCTTTATTCCAGAAACATGCCCTTTTCCTACAACTGCCACCACCGAGGAATGTTCCTTT
GCTACCTTCAATAATTTGGAGGACATATACATATCACGTTCATGTAGGAGTGTCTCCATC
AAGGTAGGAAATGCCTTACTCATCTCTTGAATAACAAGTGTTAGCATGTCAACATCCTCC
ATGTCCTTCAGCATTTTATTAAGTTCCTCCGGGCTTGGTAAAAATATGGACTGGAAAACA
ATGTAGTACAAAAACTTTGCCCTGTGCCATAATGACATTCTCCCCCAAGTCCTTCTCAAA
GTGATCTTAAATTGGCACAGCCAGTCAGCTGTTATGAATATCCTCTCCCTTCTTCTTCTT
GCATCTATCTATAACCTGTATGGAGGTTATAGACAACCAAATTCAACCACTAGATAAGTA
GGTTGCATACCTGGACAGGGCGATCTCCAAGGATAACTTTGCCGCCATAACTCATTGCTT
CCTCAAATGCCACTCGGGAATTCGGCCCCAG

consensusID : consensus_9877#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 686
fasta sequence

                              [CGCCCCTCCAGGCCTCACTGGTCCAGGCCCTGCTGTGCACTGGCCCGATCCGAGGCGGCCGCGGCCTCACACCGCTCGGTCTGCTCATGGATCCGGCCGCCGACGGCGAGGGCGGGGGCTACGAGGACGCGTCGGAGTTCGCCGACGCGGAGACGGGCGGGGGAGAGGTGGTGCGGGGGGAGGGGGAGGGGGATACNTCTTTGAAGCACCTTGCTTAGCCACTGGTAATACCACTAAACTTTCTATCTCGATTGGTTGTTCCCAATTTTTCTTTATTCCAGAAACATGCCCTTTTCCTACAACTGCCACCACCGAGGAATGTTCCTTTGCTACCTTCAATAATTTGGAGGACATATACATATCACGTTCATGTAGGAGTGTCTCCATCAAGGTAGGAAATGCCTTACTCATCTCTTGAATAACAAGTGTTAGCATGTCAACATCCTCCATGTCCTTCAGCATTTTATTAAGTTCCTCCGGGCTTGGTAAAAATATGGACTGGAAAACAATGTAGTACAAAAACTTTGCCCTGTGCCATAATGACATTCTCCCCCAACTCCTTCTCAAAGTGATCTGGACAGGGCGATCTCCAAGGATAACTTTGCCGCCATAACTCATTGCTTCCTCAAATGCCACTCGGAATTCGGCCCCAGGTAACACATCAAGTTGGCTAGCAACCTTTGCAA]

[+] EMBL CB644583             [CGCCCCTCCAGGCCTCACTGGTCCAGGCCCTGCTGTGCACTGGCCCGATCCGAGGCGGCCGCGGCCTCACACCGCTCGGTCTGCTCATGGATCCGGCCGCCGACGGCGAGGGCGGGGGCTACGAGGACGCGTCGGAGTTCGCCGACGCGGAGACGGGCGGGGGAGAGGTGGTGCGGGGGGAGGGGGAGGGGGATACNTCTTTGAAGCACCTTGCTTAGCCACTGGTAATACCACTAAACTTTCTATCTCGATTGGTTGTTCCCAATTTTTCTTTATTCCAGAAACATGCCCTTTTCCTACAACTGCCACCACCGAGGAATGTTCCTTTGCTACCTTCAATAATTTGGAGGACATATACATATCACGTTCATGTAGGAGTGTCTCCATCAAGGTAGGAAATGCCTTACTCATCTCTTGAATAACAAGTGTTAGCATGTCAACATCCTCCATGTCCTTCAGCATTTTATTAAGTTCCTCCGGGCTTGGTAAAAATATGGACTGGAAAACAATGTAGTACAAAAACTTTGCCCTGTGCCATAATGACATTCTCCCCCAACTCCTTCTCAAAGTGATCTGGACAGGGCGATCTCCAAGGATAACTTTGCCGCCATAACTCATTGCTTCCTCAAATGCCACTCGGAATTCGGCCCCAGGTAACACATCAAGTTGGCTAGCAACCTTTGCAA]




>consensus_9877#2
CGCCCCTCCAGGCCTCACTGGTCCAGGCCCTGCTGTGCACTGGCCCGATCCGAGGCGGCC
GCGGCCTCACACCGCTCGGTCTGCTCATGGATCCGGCCGCCGACGGCGAGGGCGGGGGCT
ACGAGGACGCGTCGGAGTTCGCCGACGCGGAGACGGGCGGGGGAGAGGTGGTGCGGGGGG
AGGGGGAGGGGGATACNTCTTTGAAGCACCTTGCTTAGCCACTGGTAATACCACTAAACT
TTCTATCTCGATTGGTTGTTCCCAATTTTTCTTTATTCCAGAAACATGCCCTTTTCCTAC
AACTGCCACCACCGAGGAATGTTCCTTTGCTACCTTCAATAATTTGGAGGACATATACAT
ATCACGTTCATGTAGGAGTGTCTCCATCAAGGTAGGAAATGCCTTACTCATCTCTTGAAT
AACAAGTGTTAGCATGTCAACATCCTCCATGTCCTTCAGCATTTTATTAAGTTCCTCCGG
GCTTGGTAAAAATATGGACTGGAAAACAATGTAGTACAAAAACTTTGCCCTGTGCCATAA
TGACATTCTCCCCCAACTCCTTCTCAAAGTGATCTGGACAGGGCGATCTCCAAGGATAAC
TTTGCCGCCATAACTCATTGCTTCCTCAAATGCCACTCGGAATTCGGCCCCAGGTAACAC
ATCAAGTTGGCTAGCAACCTTTGCAA

consensusID : consensus_9877#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 572
fasta sequence

                              [CCTTTTTTTTTATTTGTAAATTTAAATTTATTTGCAAAAGGCTATATACAATGTTAGGCATTATGGCAGGATGAACACAGAATTAATGGATTGACACTGTTATTTTCTACTCCATATGTAGATTCCGGTTGCTATTACTACACCACCTAATGCTCCAATGGATGCCAAAATTTTCATCTTTGAAGCACCTTGCTTAGTCACTGGGAATACCAGTAAACTTTCTATCTCGATTGGTTGTTCCCAATTTTTCTTTATTCCAGAAACATGCCCTTTTCCTACAACTGCCACCACCGAGGAATGTTCCTTTGCTACCTTCAATAATTTGGAGGACATATACATATCACGTTCATGTAGGAGTGTCTCCATCAAGGTAGGAAATGCCTTACTCATCTCTTGAATAACAAGTGTTAGCATGTCAACATCCTCCATGTCCTTCAGCATTTTATTAAGTTCCTCCGGGCTTGGTAAAAATATGGACTGGAAAACAATGTAGTACAAAAACTTTGCCCTGTGCCATAATGACATTCTCCCCCAAGTCCTTCTCAAAGTGATCTGGACAGGGCGATCTCCAA]

[+] EMBL CB682099             [CCTTTTTTTTTATTTGTAAATTTAAATTTATTTGCAAAAGGCTATATACAATGTTAGGCATTATGGCAGGATGAACACAGAATTAATGGATTGACACTGTTATTTTCTACTCCATATGTAGATTCCGGTTGCTATTACTACACCACCTAATGCTCCAATGGATGCCAAAATTTTCATCTTTGAAGCACCTTGCTTAGTCACTGGGAATACCAGTAAACTTTCTATCTCGATTGGTTGTTCCCAATTTTTCTTTATTCCAGAAACATGCCCTTTTCCTACAACTGCCACCACCGAGGAATGTTCCTTTGCTACCTTCAATAATTTGGAGGACATATACATATCACGTTCATGTAGGAGTGTCTCCATCAAGGTAGGAAATGCCTTACTCATCTCTTGAATAACAAGTGTTAGCATGTCAACATCCTCCATGTCCTTCAGCATTTTATTAAGTTCCTCCGGGCTTGGTAAAAATATGGACTGGAAAACAATGTAGTACAAAAACTTTGCCCTGTGCCATAATGACATTCTCCCCCAAGTCCTTCTCAAAGTGATCTGGACAGGGCGATCTCCAA]




>consensus_9877#3
CCTTTTTTTTTATTTGTAAATTTAAATTTATTTGCAAAAGGCTATATACAATGTTAGGCA
TTATGGCAGGATGAACACAGAATTAATGGATTGACACTGTTATTTTCTACTCCATATGTA
GATTCCGGTTGCTATTACTACACCACCTAATGCTCCAATGGATGCCAAAATTTTCATCTT
TGAAGCACCTTGCTTAGTCACTGGGAATACCAGTAAACTTTCTATCTCGATTGGTTGTTC
CCAATTTTTCTTTATTCCAGAAACATGCCCTTTTCCTACAACTGCCACCACCGAGGAATG
TTCCTTTGCTACCTTCAATAATTTGGAGGACATATACATATCACGTTCATGTAGGAGTGT
CTCCATCAAGGTAGGAAATGCCTTACTCATCTCTTGAATAACAAGTGTTAGCATGTCAAC
ATCCTCCATGTCCTTCAGCATTTTATTAAGTTCCTCCGGGCTTGGTAAAAATATGGACTG
GAAAACAATGTAGTACAAAAACTTTGCCCTGTGCCATAATGACATTCTCCCCCAAGTCCT
TCTCAAAGTGATCTGGACAGGGCGATCTCCAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9877#1      -----------------------------------------------------NATCTAT 7
consensus_9877#3      -----------------------------------------------CCTTTTTTTTTAT 13
consensus_9877#0      AAATTCAGTATATTTGTCCTTTCATTTGTTTTGACTTCAGTATCGGAAAATTGCATCTAT 60
consensus_9877#2      ----------------------------------CGCCCCTCCAGGCCTCACTGGTCCAG 26
                                                                             *  * 

consensus_9877#1      TTGTAAATTTAAATTTATTTGCAAAAGG-TAAATACAATGTTAGGCATTATGGCAGGAT- 65
consensus_9877#3      TTGTAAATTTAAATTTATTTGCAAAAGGCTATATACAATGTTAGGCATTATGGCAGGAT- 72
consensus_9877#0      TTGTAAATTTAAATTTATTTGCAAAAGG-TAAATACAATGTTAGGCATTATGGCAGGAT- 118
consensus_9877#2      GCCCTGCTGTGCACTGGCCCGATCCGAGGCGGCCGCGGCCTCACACCGCTCGGTCTGCTC 86
                             * *  * *     *      *       *    * *  *     **   * * 

consensus_9877#1      ---GAACAGAGAATTAATGGATTGACACTGTTATTTTCTACTCCATATGTAAATTC-CGG 121
consensus_9877#3      ---GAACACAGAATTAATGGATTGACACTGTTATTTTCTACTCCATATGTAGATTC-CGG 128
consensus_9877#0      ---GAACAGAGAATTAATGGATTGACACTGTTATTTTCTACTCCATATGTAGATTC-CGG 174
consensus_9877#2      ATGGATCCGGCCGCCGACGG--CGAGGGCGGGGGCTACGAGGACGCGTCGGAGTTCGCCG 144
                         ** *         * **   **    *     * * *   *   *     *** * *

consensus_9877#1      TTGCTATTACTAC-----ACCACCTAATGCTCCAATGGATGCCAAAATTTTCATCTTTGA 176
consensus_9877#3      TTGCTATTACTAC-----ACCACCTAATGCTCCAATGGATGCCAAAATTTTCATCTTTGA 183
consensus_9877#0      TTGCTATTACTAC-----ACCACCTAATGCTCCAATGGATGCCAAAATTTTCATCTTTGA 229
consensus_9877#2      ACGCGGAGACGGGCGGGGGAGAGGTGGTGCGGGGGGAGGGGGAGGGGGATACNTCTTTGA 204
                        **    **           *  *  ***       *  *        * * *******

consensus_9877#1      AGCACCTTGCTTAGTCACTGGTAATACCAGTAAACTTTCTATCTCGATTGGTTGTTCCCA 236
consensus_9877#3      AGCACCTTGCTTAGTCACTGGGAATACCAGTAAACTTTCTATCTCGATTGGTTGTTCCCA 243
consensus_9877#0      AGCACCTTGCTTAGTCACTGGTAATACCAGTAAACTTTCTATCTCGATTGGTTGTTCCCA 289
consensus_9877#2      AGCACCTTGCTTAGCCACTGGTAATACCACTAAACTTTCTATCTCGATTGGTTGTTCCCA 264
                      ************** ****** ******* ******************************

consensus_9877#1      ATTTTTCTTTATTCCAGAAACATGCCCTTTTCCTACAACTGCCACCACCGAGGAATGTTC 296
consensus_9877#3      ATTTTTCTTTATTCCAGAAACATGCCCTTTTCCTACAACTGCCACCACCGAGGAATGTTC 303
consensus_9877#0      ATTTTTCTTTATTCCAGAAACATGCCCTTTTCCTACAACTGCCACCACCGAGGAATGTTC 349
consensus_9877#2      ATTTTTCTTTATTCCAGAAACATGCCCTTTTCCTACAACTGCCACCACCGAGGAATGTTC 324
                      ************************************************************

consensus_9877#1      CTTTGCTACCTTCAATAATTTGGAGGACATATACATATCACGTTCATGTAGGAGTGTCTC 356
consensus_9877#3      CTTTGCTACCTTCAATAATTTGGAGGACATATACATATCACGTTCATGTAGGAGTGTCTC 363
consensus_9877#0      CTTTGCTACCTTCAATAATTTGGAGGACATATACATATCACGTTCATGTAGGAGTGTCTC 409
consensus_9877#2      CTTTGCTACCTTCAATAATTTGGAGGACATATACATATCACGTTCATGTAGGAGTGTCTC 384
                      ************************************************************

consensus_9877#1      CATCAAGGTAGGAAATGCCTTACTCATCTCTTGAATAACAAGTGTTAGCATGTCAACATC 416
consensus_9877#3      CATCAAGGTAGGAAATGCCTTACTCATCTCTTGAATAACAAGTGTTAGCATGTCAACATC 423
consensus_9877#0      CATCAAGGTAGGAAATGCCTTACTCATCTCTTGAATAACAAGTGTTAGCATGTCAACATC 469
consensus_9877#2      CATCAAGGTAGGAAATGCCTTACTCATCTCTTGAATAACAAGTGTTAGCATGTCAACATC 444
                      ************************************************************

consensus_9877#1      CTCCATGTCCTTCAGCATTTTATTAAGTTCCTCCGGGCTTGGTAAAAATATGGACTGGAA 476
consensus_9877#3      CTCCATGTCCTTCAGCATTTTATTAAGTTCCTCCGGGCTTGGTAAAAATATGGACTGGAA 483
consensus_9877#0      CTCCATGTCCTTCAGCATTTTATTAAGTTCCTCCGGGCTTGGTAAAAATATGGACTGGAA 529
consensus_9877#2      CTCCATGTCCTTCAGCATTTTATTAAGTTCCTCCGGGCTTGGTAAAAATATGGACTGGAA 504
                      ************************************************************

consensus_9877#1      AACAATGTAGTACAAAAACTTTGCCCTGTGCCATAATGACATTCTCCCCCAAGTCCTTCT 536
consensus_9877#3      AACAATGTAGTACAAAAACTTTGCCCTGTGCCATAATGACATTCTCCCCCAAGTCCTTCT 543
consensus_9877#0      AACAATGTAGTACAAAAACTTTGCCCTGTGCCATAATGACATTCTCCCCCAAGTCCTTCT 589
consensus_9877#2      AACAATGTAGTACAAAAACTTTGCCCTGTGCCATAATGACATTCTCCCCCAACTCCTTCT 564
                      **************************************************** *******

consensus_9877#1      CAAAGTGATCTTAAATTGGC-ACAGCCAGTCAGCTGTTATGAATATCCTCTCCCTTCTTC 595
consensus_9877#3      CAAAGTGATCTGGACAGGGCGATCTCCAA------------------------------- 572
consensus_9877#0      CAAAGTGATCTGGACAGGGCGATCTCCAA--GGATAACTTTGCCGCCATAACTCATTGCT 647
consensus_9877#2      CAAAGTGATCTGGACAGGGCGATCTCCAA--GGATAACTTTGCCGCCATAACTCATTGCT 622
                      ***********  *   *** *   ***                                

consensus_9877#1      TTCTTGCAT-CTATCTATAACCTGTATGGAGGTTATAGA-CAACCAAATT--CAACCACT 651
consensus_9877#3      ------------------------------------------------------------
consensus_9877#0      TCCTCAAATGCCACTCGGAATTCGGCCCCAGGTAACACATCAAGTTGGCTAGCAACCTTT 707
consensus_9877#2      TCCTCAAATGCCACTCGGAATTCGGCCCCAGGTAACACATCAAGTTGGCTAGCAACCTTT 682
                                                                                  

consensus_9877#1      A-GATAAGTAGGTTGCATACCTGGACAGGGCGATCTCCAAGGATAACTTTGCCGCCATAA 710
consensus_9877#3      ------------------------------------------------------------
consensus_9877#0      GCAAGAAACCAGCTGTAGAGTATTCCAAAAGTGTTCATCTTCTTTTTCTTCCACATGTCA 767
consensus_9877#2      GCAA-------------------------------------------------------- 686
                                                                                  

consensus_9877#1      CTCATTGCTTCCTCAAATGCCACTCGGGAATTC---GGCCCCAG---------------- 751
consensus_9877#3      ------------------------------------------------------------
consensus_9877#0      ATCATTTCGTTCATGGTAGGAACCTGAAGGTTTTGTGGTGTCAGAATGGCGACTCTGCTG 827
consensus_9877#2      ------------------------------------------------------------
                                                                                  

consensus_9877#1      --------------------------------
consensus_9877#3      --------------------------------
consensus_9877#0      GCACAGAGCTCCAAGAAAACAGCCTGAGGTTT 859
consensus_9877#2      --------------------------------