cluster # 9879

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 9879 cluster # 9879 Sequences # 7 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9879#0 length = 3430 sequences # 3

consensus_9879#1 length = 1597 sequences # 3
consensus_9879#2 length = 669 sequences # 1

consensusID : consensus_9879#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 3430
fasta sequence

                              [GCGGCGAGCGCTCGAGCTGGGTGCGCGAGCGGTTGGCGGCGACGGCCGGCGGCCGGCGGCGAGGTCGAGCGAGGAGGCGGGCCGGCGAGGCGCGCGGTACTTTGTGCCTCGAAACGAGTGGGCCTTTATTTTTTTTTTGGTTCTGTTTCGGCTCGTCGCGGATTTCGCACGGTTTGCTTCGTTCTTGGTGATTTTCTTGAAGCGTCGTCTTCTCCAATCGATCGCTTCCTGTAGCTTCTCCACCCTTCTTCTGTGGTGGATACAGATTTGTTCTTGGAAGCGGCTGGGATTTCGGTTAACGATGCCATTGGTTTCTATTCTAACATATGCTTTCTCTTGTCTCTTGTGTCTCTTGTGTGTTCAGATTGGGCTTGTTGGTGTCGGATTTGATTGTGGTTTCGTGGCTGTGATGACAATCAAACCTCGTTTCTCGATGCTGAGACTTGATTTGTTCAAGGACCAGAACTGTGCTGACCTTAATTTGTGCGTGTCTGAGCCACCCCAAACACACCATGTCCGAATCGATTTCTGCGAAAGTTAGTATGTCTGCACGATGCCACTCGATGCTACTACTAGTATTTAGGTGTCTTTATTAGCTTTTTCCTCTTCTATGTTTATTGGCTGTTTCTTGCATTTGCGTTGTTGTAGTGTGGCTGTGAGGACTAACTACTTTGTTTCTCGATGCTGACTTGATTCAATCAATCAAGGACCAAAAAAATTTGATGACCTTTGTGCGTGTCTGAGCCACTGCAACTCAGTTTTTTCAGTCTTCGCTTGTGTGAAGATATCATCTTGCCTTCCGTGTTTTGAGCCTGAACGATAAAGAAGAGATGTTTCTTGGTGCTGATTCGACTCATTTTAGGATGGAATTTTGACGAGGCTCATGCGTGTCTGAAGTCTGAACCATTGTAAAACTTGGATGTAGTTGTTGTTTTAGGTGTCTGAAGTCTGAACCATTGTAAAACTTGGACGTAGTTGTTGTTTTTTTTCCTAAAAAAAGAGAACTTTTTTCTCTCGTTTTTTCTCTGCTGTATTTGAATTTGTTCATTTTTTCCAGCTGTTGTACACTTGTACTTCATATTGGGATACTGAATGTTAGGTGCGATCAATGTAGTAGTGCTTGCATGTTTGACAAACTCATGGACATTAACTCAAGTTATCTAAAACATTGAGATCCTTGGAATAGTTATGCTGGAACTATTGCATGGAAATTTTACAACTCGCTATATGCTAGAAGCGAATCCCCGTAGTTCATTTTCCTCAATCAGCCCAGTAGATTTCTAGCTAATGGTATCTGATAAGGGGCAAATTGTTTTTTCAAGGATACAGCTGAATTCATAAGAACTGAAAATCGCAATTAGCTGGTATTACATTGCAGAAGCTTGAGAACAGAAAGAAGGGAATAACATGCATGGGTAACGCCAATACTAAAGCTATCCCATGGTGAGCTCATTAACGACTTGATCTCCATTTCCTGAAGATTCACATTGCATGATCCTCGAGGTTCAGTAACCAACCATATGGCCTTGCTTCTGGTTTCATGATTGAATCGTCAGGATTTTTGGAGTTTGTCAAGATCTCACCTAGAGGTCCACCTTGAGGCATCTCCCAAGAACTTGAGATGCTATCCTCTTGCATTTGTGCCATATTAGGTGCATGGCAGCTGACGCGTGGGTCCTCTGGCGAGGAATAGAAAGTTGATGGAACTGTCATGACATTGGAATCTTTGCTTTTCTGAAACTCCATTTTCTCGTCCTTAGGCAAGCTGAAATTCTGAAGGACTGACTGAAGGCATCCACGATCATGCATCTTGGTGAAAGGAATGCTTTTGTTGTTCTGCTGGTTGCTGCTCTCCCAAGGCTTCAACATGGTATTTGAAGAAATCGATTCACTGTCTCCTGCTGTATTGAACTTCTCCGGTTTGTTCTGTTGCTTCAACTGAGAGAACAGGGACAATGTTGGCTGTTGATTCGTTAAATTTAGCAGTGGGCCATTGTTTTCTTCAGCAGCTTTGTTTCCTTTCTCTTTGTTCGCCATTGTCCTGCAAATGTGTACAGGTCTTCAAATTAAATGATTATTACTTTCTATTAAAACTGAAATAATCTAGTTGTTTTCCTTTGTCCCTGACTATATTGCAGCATTTGTATTCCATTCTTTATAAGAGATTTTTTTCCACCAGAACCACAACGATTACCTTCTATCATGAAAATGTACCAGAAAATCTTAAACCATCAATAGGATATGCAAAAATGGTGGAAAAAAATACTGTGATTCAGTCTGTAGCACTAAAATACTTGCACGTTGAGAATATTAAACCAAGTTTAAGGATGTATTAACCTGTTCAAACTATCTGTCCAATAGCTGATACTGCGTGGCTTCATTTCATTAACTTTTGCCTTCTTGAAGCTGCCCTGCCCGACAGAAGATGGCAATGAGCCAGCACACGGTGTCTCTTTCACAGTCTTTCTACTTTGGTTTTCCACAGGCTCTCTTGAACGGTGGCGGTTTCTGTTGATGTGCCTCTCACAATACTTGTGGTCGGCCATGGCCTCCTTTGAACACCGCCATTTCTTGCCATCTGTTCGACGGCATCTTCCAGGTTCTGGGTCAGAGTCTGCATTTGGGAAGCCTTGATAGAGAGGCCTCCAGCTCACTGCAGTACAATAAGTGAACAGAAAAAAACACTGTCCATCATGAGTTGCAGAGAAATACACAGATCAATGGCCTTACATACATACATGCACACATGATCTTTGCTTCTAACCTATTGCAAGTTAATAACATGGAAGTGTGTATGTATGTGGTGATGAGCAAGGCCAGACCTGATGGCAATGTGTGAGCAGCCTTGGCGAATCTGAGCATCTTCTGTTCATCAAGAAAGGGGGAAGGGTATGATGCAGCAGCAGCCTGGGTGAAGCTACCAGCAGCAGCTCTCTTGATGAGGCTCAGATCACCCTCCTTGGTGGATGGCACTGTGAGTCCTTGCAAGCCCAACACCTCTCCAAGCTCCATGGCAGCAGCAGAGAAGTCAGCAAACATCTTGGAAGGACAGGAGGAGGGGAGAGGAG---GAAGAAGAAGAAGAGGAGGGGGTGAGCATTGCTGGGGACAGTCACAGTGAGGCTGAGGTTGAGAGTGAGGAGGGTGTAGTGTGTGCTTTCTAGTAGGAGGCAGGAAGTGTGTGGTGATATATTATGGGATGGTGGCTCTTTGGGAGACTAGAGGTAGGGCTAGGTGGTGGCCCTTAAATAGCAGGAGTCCTTTCATTCTTTTAGTGGAGTAACTTTTTTTGCTGTCATTTCTTTATTTTATTTTTATTTTATTGATTTTTTGGGCTCAATGTTTCTGTGAAGTGATACTGCTGGGTACTGATGGGGAGGAGTAATTGGTTC--ATA-AAAAGGTAGTAGTAGCAGCAGCAAAAAAAAAAAAAAAA]

[+] EMBL AK067566             [GCGGCGAGCGCTCGAGCTGGGTGCGCGAGCGGTTGGCGGCGACGGCCGGCGGCCGGCGGCGAGGTCGAGCGAGGAGGCGGGCCGGCGAGGCGCGCGGTACTTTGTGCCTCGAAACGAGTGGGCCTTTATTTTTTTTTTGGTTCTGTTTCGGCTCGTCGCGGATTTCGCACGGTTTGCTTCGTTCTTGGTGATTTTCTTGAAGCGTCGTCTTCTCCAATCGATCGCTTCCTGTAGCTTCTCCACCCTTCTTCTGTGGTGGATACAGATTTGTTCTTGGAAGCGGCTGGGATTTCGGTTAACGATGCCATTGGTTTCTATTCTAACATATGCTTTCTCTTGTCTCTTGTGTCTCTTGTGTGTTCAGATTGGGCTTGTTGGTGTCGGATTTGATTGTGGTTTCGTGGCTGTGATGACAATCAAACCTCGTTTCTCGATGCTGAGACTTGATTTGTTCAAGGACCAGAACTGTGCTGACCTTAATTTGTGCGTGTCTGAGCCACCCCAAACACACCATGTCCGAATCGATTTCTGCGAAAGTTAGTATGTCTGCACGATGCCACTCGATGCTACTACTAGTATTTAGGTGTCTTTATTAGCTTTTTCCTCTTCTATGTTTATTGGCTGTTTCTTGCATTTGCGTTGTTGTAGTGTGGCTGTGAGGACTAACTACTTTGTTTCTCGATGCTGACTTGATTCAATCAATCAAGGACCAAAAAAATTTGATGACCTTTGTGCGTGTCTGAGCCACTGCAACTCAGTTTTTTCAGTCTTCGCTTGTGTGAAGATATCATCTTGCCTTCCGTGTTTTGAGCCTGAACGATAAAGAAGAGATGTTTCTTGGTGCTGATTCGACTCATTTTAGGATGGAATTTTGACGAGGCTCATGCGTGTCTGAAGTCTGAACCATTGTAAAACTTGGATGTAGTTGTTGTTTTAGGTGTCTGAAGTCTGAACCATTGTAAAACTTGGACGTAGTTGTTGTTTTTTTTCCTAAAAAAAGAGAACTTTTTTCTCTCGTTTTTTCTCTGCTGTATTTGAATTTGTTCATTTTTTCCAGCTGTTGTACACTTGTACTTCATATTGGGATACTGAATGTTAGGTGCGATCAATGTAGTAGTGCTTGCATGTTTGACAAACTCATGGACATTAACTCAAGTTATCTAAAACATTGAGATCCTTGGAATAGTTATGCTGGAACTATTGCATGGAAATTTTACAACTCGCTATATGCTAGAAGCGAATCCCCGTAGTTCATTTTCCTCAATCAGCCCAGTAGATTTCTAGCTAATGGTATCTGATAAGGGGCAAATTGTTTTTTCAAGGATACAGCTGAATTCATAAGAACTGAAAATCGCAATTAGCTGGTATTACATTGCAGAAGCTTGAGAACAGAAAGAAGGGAATAACATGCATGGGTAACGCCAATACTAAAGCTATCCCATGGTGAGCTCATTAACGACTTGATCTCCATTTCCTGAAGATTCACATTGCATGATCCTCGAGGTTCAGTAACCAACCATATGGCCTTGCTTCTGGTTTCATGATTGAATCGTCAGGATTTTTGGAGTTTGTCAAGATCTCACCTAGAGGTCCACCTTGAGGCATCTCCCAAGAACTTGAGATGCTATCCTCTTGCATTTGTGCCATATTAGGTGCATGGCAGCTGACGCGTGGGTCCTCTGGCGAGGAATAGAAAGTTGATGGAACTGTCATGACATTGGAATCTTTGCTTTTCTGAAACTCCATTTTCTCGTCCTTAGGCAAGCTGAAATTCTGAAGGACTGACTGAAGGCATCCACGATCATGCATCTTGGTGAAAGGAATGCTTTTGTTGTTCTGCTGGTTGCTGCTCTCCCAAGGCTTCAACATGGTATTTGAAGAAATCGATTCACTGTCTCCTGCTGTATTGAACTTCTCCGGTTTGTTCTGTTGCTTCAACTGAGAGAACAGGGACAATGTTGGCTGTTGATTCGTTAAATTTAGCAGTGGGCCATTGTTTTCTTCAGCAGCTTTGTTTCCTTTCTCTTTGTTCGCCATTGTCCTGCAAATGTGTACAGGTCTTCAAATTAAATGATTATTACTTTCTATTAAAACTGAAATAATCTAGTTGTTTTCCTTTGTCCCTGACTATATTGCAGCATTTGTATTCCATTCTTTATAAGAGATTTTTTTCCACCAGAACCACAACGATTACCTTCTATCATGAAAATGTACCAGAAAATCTTAAACCATCAATAGGATATGCAAAAATGGTGGAAAAAAATACTGTGATTCAGTCTGTAGCACTAAAATACTTGCACGTTGAGAATATTAAACCAAGTTTAAGGATGTATTAACCTGTTCAAACTATCTGTCCAATAGCTGATACTGCGTGGCTTCATTTCATTAACTTTTGCCTTCTTGAAGCTGCCCTGCCCGACAGAAGATGGCAATGAGCCAGCACACGGTGTCTCTTTCACAGTCTTTCTACTTTGGTTTTCCACAGGCTCTCTTGAACGGTGGCGGTTTCTGTTGATGTGCCTCTCACAATACTTGTGGTCGGCCATGGCCTCCTTTGAACACCGCCATTTCTTGCCATCTGTTCGACGGCATCTTCCAGGTTCTGGGTCAGAGTCTGCATTTGGGAAGCCTTGATAGAGAGGCCTCCAGCTCACTGCAGTACAATAAGTGAACAGAAAAAAACACTGTCCATCATGAGTTGCAGAGAAATACACAGATCAATGGCCTTACATACATACATGCACACATGATCTTTGCTTCTAACCTATTGCAAGTTAATAACATGGAAGTGTGTATGTATGTGGTGATGAGCAAGGCCAGACCTGATGGCAATGTGTGAGCAGCCTTGGCGAATCTGAGCATCTTCTGTTCATCAAGAAAGGGGGAAGGGTATGATGCAGCAGCAGCCTGGGTGAAGCTACCAGCAGCAGCTCTCTTGATGAGGCTCAGATCACCCTCCTTGGTGGATGGCACTGTGAGTCCTTGCAAGCCCAACACCTCTCCAAGCTCCATGGCAGCAGCAGAGAAGTCAGCAAACATCTTGGAAGGACAGGAGGAGGGGAGAGGAG   GAAGAAGAAGAAGAGGAGGGGGTGAGCATTGCTGGGGACAGTCACAGTGAGGCTGAGGTTGAGAGTGAGGAGGGTGTAGTGTGTGCTTTCTAGTAGGAGGCAGGAAGTGTGTGGTGATATATTATGGGATGGTGGCTCTTTGGGAGACTAGAGGTAGGGCTAGGTGGTGGCCCTTAAATAGCAGGAGTCCTTTCATTCTTTTAGTGGAGTAACTTTTTTTGCTGTCATTTCTTTATTTTATTTTTATTTTATTGATTTTTTGGGCTCAATGTTTCTGTGAAGTGATACTGCTGGGTACTGATGGGGAGGAGTAATTGGTTC  ATA AAAAGGTAGTAGTAGCAGCAGCA               ]
[-] EMBL CA759132             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ATTTTGGCTTCTAACCTAGTCCAAGTTAATACCATGAAAGTGTGTATGTATGTGGTGATGAGCAAGGCCAGCCCTGATGGCAATGTGTGAGCAACCTTGGNGAATCTGAGCATCTTCTGTTCATCAAGAAAGGGGGAAGGGTATGATGCAGCAGCAGCCTGGGTGAAGCTACCAGCAGCAGCTCTCTTGATGAGGCTCAGATCACCCTCCTTGGTGGATGGCACTGTGAGTCCTTGC AGCCCAACACCTCTCCAAGCTCCATGGCAGCAGCAGAGAAGTCAGCAAACATCTTGGAAGGCCAGGAGGAGGGGAGAGGAGGAAGAAGAAGAAGAAGAGGAGGGGGTGAGCATTGCTGGGGACAGTCCCAGTGAGGCTGAGGTTGAGAGTGAGGAGGGTGTAGTGTGTGCTTTCTAGTAGGAGGCAGGAAGTGTGTGGTGATATATTATGGGATGGTGGCTCTTTGGGAGACTAGAGGTAGGGCTAGGTGGTGGCCCTTAAATAGCAGGAGTCCTTTCATTCTTTTAGTGGAGTAGCTTTTTTTGCTGTCATTTCTTTATTTTATTTCTATCTTATTGATTTTTTGGGCTCAATGTTTCTGTGAAGTGATACTGTTGGGTACTGATGGGGAGGAGTAATTGGTTCGTATATAAAATCTAGTAGAGGTAGTAGTAAAAAAAAAAAAAAAA]
[-] EMBL C97043               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GCAGCCTTGACGAATCTGAGCATCTTCTGTTCATCAANAAAGGNGGAAGGGTATGATGCAGCAGCAGCCTGGGTGAAGCTACCAGCAGCAGCTCTCNTGATGAGGCTCANATCACCCTCCTTGGTGGATGGCACTGTGAGTCCTTGCAAGCCCAACACCTCTCCAAGCTCCATGGCAGCAGCAGAGAAGTCAGCAAACATCTTGGAAGGACAGGAGGAGGGGAGAGGAG   NAAGAAGNAGNAGAGGAGGGGGTGAGCATTGCTGGGGACAGTCACAGTGAGGCTGAGG                                                                                                                                                                                                                                                                                                                   ]




>consensus_9879#0
GCGGCGAGCGCTCGAGCTGGGTGCGCGAGCGGTTGGCGGCGACGGCCGGCGGCCGGCGGC
GAGGTCGAGCGAGGAGGCGGGCCGGCGAGGCGCGCGGTACTTTGTGCCTCGAAACGAGTG
GGCCTTTATTTTTTTTTTGGTTCTGTTTCGGCTCGTCGCGGATTTCGCACGGTTTGCTTC
GTTCTTGGTGATTTTCTTGAAGCGTCGTCTTCTCCAATCGATCGCTTCCTGTAGCTTCTC
CACCCTTCTTCTGTGGTGGATACAGATTTGTTCTTGGAAGCGGCTGGGATTTCGGTTAAC
GATGCCATTGGTTTCTATTCTAACATATGCTTTCTCTTGTCTCTTGTGTCTCTTGTGTGT
TCAGATTGGGCTTGTTGGTGTCGGATTTGATTGTGGTTTCGTGGCTGTGATGACAATCAA
ACCTCGTTTCTCGATGCTGAGACTTGATTTGTTCAAGGACCAGAACTGTGCTGACCTTAA
TTTGTGCGTGTCTGAGCCACCCCAAACACACCATGTCCGAATCGATTTCTGCGAAAGTTA
GTATGTCTGCACGATGCCACTCGATGCTACTACTAGTATTTAGGTGTCTTTATTAGCTTT
TTCCTCTTCTATGTTTATTGGCTGTTTCTTGCATTTGCGTTGTTGTAGTGTGGCTGTGAG
GACTAACTACTTTGTTTCTCGATGCTGACTTGATTCAATCAATCAAGGACCAAAAAAATT
TGATGACCTTTGTGCGTGTCTGAGCCACTGCAACTCAGTTTTTTCAGTCTTCGCTTGTGT
GAAGATATCATCTTGCCTTCCGTGTTTTGAGCCTGAACGATAAAGAAGAGATGTTTCTTG
GTGCTGATTCGACTCATTTTAGGATGGAATTTTGACGAGGCTCATGCGTGTCTGAAGTCT
GAACCATTGTAAAACTTGGATGTAGTTGTTGTTTTAGGTGTCTGAAGTCTGAACCATTGT
AAAACTTGGACGTAGTTGTTGTTTTTTTTCCTAAAAAAAGAGAACTTTTTTCTCTCGTTT
TTTCTCTGCTGTATTTGAATTTGTTCATTTTTTCCAGCTGTTGTACACTTGTACTTCATA
TTGGGATACTGAATGTTAGGTGCGATCAATGTAGTAGTGCTTGCATGTTTGACAAACTCA
TGGACATTAACTCAAGTTATCTAAAACATTGAGATCCTTGGAATAGTTATGCTGGAACTA
TTGCATGGAAATTTTACAACTCGCTATATGCTAGAAGCGAATCCCCGTAGTTCATTTTCC
TCAATCAGCCCAGTAGATTTCTAGCTAATGGTATCTGATAAGGGGCAAATTGTTTTTTCA
AGGATACAGCTGAATTCATAAGAACTGAAAATCGCAATTAGCTGGTATTACATTGCAGAA
GCTTGAGAACAGAAAGAAGGGAATAACATGCATGGGTAACGCCAATACTAAAGCTATCCC
ATGGTGAGCTCATTAACGACTTGATCTCCATTTCCTGAAGATTCACATTGCATGATCCTC
GAGGTTCAGTAACCAACCATATGGCCTTGCTTCTGGTTTCATGATTGAATCGTCAGGATT
TTTGGAGTTTGTCAAGATCTCACCTAGAGGTCCACCTTGAGGCATCTCCCAAGAACTTGA
GATGCTATCCTCTTGCATTTGTGCCATATTAGGTGCATGGCAGCTGACGCGTGGGTCCTC
TGGCGAGGAATAGAAAGTTGATGGAACTGTCATGACATTGGAATCTTTGCTTTTCTGAAA
CTCCATTTTCTCGTCCTTAGGCAAGCTGAAATTCTGAAGGACTGACTGAAGGCATCCACG
ATCATGCATCTTGGTGAAAGGAATGCTTTTGTTGTTCTGCTGGTTGCTGCTCTCCCAAGG
CTTCAACATGGTATTTGAAGAAATCGATTCACTGTCTCCTGCTGTATTGAACTTCTCCGG
TTTGTTCTGTTGCTTCAACTGAGAGAACAGGGACAATGTTGGCTGTTGATTCGTTAAATT
TAGCAGTGGGCCATTGTTTTCTTCAGCAGCTTTGTTTCCTTTCTCTTTGTTCGCCATTGT
CCTGCAAATGTGTACAGGTCTTCAAATTAAATGATTATTACTTTCTATTAAAACTGAAAT
AATCTAGTTGTTTTCCTTTGTCCCTGACTATATTGCAGCATTTGTATTCCATTCTTTATA
AGAGATTTTTTTCCACCAGAACCACAACGATTACCTTCTATCATGAAAATGTACCAGAAA
ATCTTAAACCATCAATAGGATATGCAAAAATGGTGGAAAAAAATACTGTGATTCAGTCTG
TAGCACTAAAATACTTGCACGTTGAGAATATTAAACCAAGTTTAAGGATGTATTAACCTG
TTCAAACTATCTGTCCAATAGCTGATACTGCGTGGCTTCATTTCATTAACTTTTGCCTTC
TTGAAGCTGCCCTGCCCGACAGAAGATGGCAATGAGCCAGCACACGGTGTCTCTTTCACA
GTCTTTCTACTTTGGTTTTCCACAGGCTCTCTTGAACGGTGGCGGTTTCTGTTGATGTGC
CTCTCACAATACTTGTGGTCGGCCATGGCCTCCTTTGAACACCGCCATTTCTTGCCATCT
GTTCGACGGCATCTTCCAGGTTCTGGGTCAGAGTCTGCATTTGGGAAGCCTTGATAGAGA
GGCCTCCAGCTCACTGCAGTACAATAAGTGAACAGAAAAAAACACTGTCCATCATGAGTT
GCAGAGAAATACACAGATCAATGGCCTTACATACATACATGCACACATGATCTTTGCTTC
TAACCTATTGCAAGTTAATAACATGGAAGTGTGTATGTATGTGGTGATGAGCAAGGCCAG
ACCTGATGGCAATGTGTGAGCAGCCTTGGCGAATCTGAGCATCTTCTGTTCATCAAGAAA
GGGGGAAGGGTATGATGCAGCAGCAGCCTGGGTGAAGCTACCAGCAGCAGCTCTCTTGAT
GAGGCTCAGATCACCCTCCTTGGTGGATGGCACTGTGAGTCCTTGCAAGCCCAACACCTC
TCCAAGCTCCATGGCAGCAGCAGAGAAGTCAGCAAACATCTTGGAAGGACAGGAGGAGGG
GAGAGGAGGAAGAAGAAGAAGAGGAGGGGGTGAGCATTGCTGGGGACAGTCACAGTGAGG
CTGAGGTTGAGAGTGAGGAGGGTGTAGTGTGTGCTTTCTAGTAGGAGGCAGGAAGTGTGT
GGTGATATATTATGGGATGGTGGCTCTTTGGGAGACTAGAGGTAGGGCTAGGTGGTGGCC
CTTAAATAGCAGGAGTCCTTTCATTCTTTTAGTGGAGTAACTTTTTTTGCTGTCATTTCT
TTATTTTATTTTTATTTTATTGATTTTTTGGGCTCAATGTTTCTGTGAAGTGATACTGCT
GGGTACTGATGGGGAGGAGTAATTGGTTCATAAAAAGGTAGTAGTAGCAGCAGCAAAAAA
AAAAAAAAAA

consensusID : consensus_9879#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1597
fasta sequence

                              [GCTGAATTCATAAGAACTGAAAATCGCAATTAGCTGGTATTACATTGCAGAAGCTTGAGAACAGAAAGAAGGGAATAACATGCATGGGTAACGCCAATACTAAAGCTATCCCATGGTGAGCTCATTAACGACTTGATCTCCATTTCCTGAAGATTCACATTGCATGATCCTCGAGGTTCAGTAACCAACCATATGGCCTTGCTTCTGGTTTCATGATTGAATCGTCAGGATTTTTGGAGTTTGTCAAGATCTCACCTAGAGGTCCACCTTGAGGCATCTCCCAAGAACTTGAGATGCTATCCTCTTGCATTTGTGCCATATTAGGTGCATGGCAGCTGACGCGTGGGTCCTCTGGCGAGGAATAGAAAGTTGATGGAACTGTCATGACATTGGAATCTTT-GCTTTTCT-GAAACTCCATTTTCTCGTCCTT-AGGCAAGCTGAAATTCTG-AAGGACTGACTGAAGGCATCCACGATCATGCATCTTGGTGAAAGGAATGCTTTTGTTGTTCTGCTGGTTGCTGCTCTCCC-AAGGCTTC-AACATGGTATTTGAAGAAAT-CGATTCACTGTCTCCTGCT-GTATTGAACTTCTCCGGTTTGTTCTGTTGCTTCAACTGAGAGAACAGGGACAATGTTGGCTGTTGATTCGTTAAATTTAGCAGTGGGCCATTGTTTTCTTCAGCAGCTTTGTTTCCTTTCTCTTTGTTCGCCATTGTCCTGTTCAAACTATCTGTCCAATAGCTGATACTGCGTGGCTTCATTTCATTAACTTTTGCCTTCTTGAAGCTGCCCTGCCCGACAGAAGATGGCAATGAGCCAGCACACGGTGTCTCTTTCACAGTCTTT-CTACTTTGGTTTTCCACAGGCTTTCTTGAACGGTGGC-GGTTTCTGTTGATGTGCCTCTCACAATACTTGTGGTCGGCCATGGCCTCCTTTGAACACCGCCATTTCTTGCCATCTGTTCGACGGCATCTTCCAGGTTCTGGGTCAGAGTCTGCATTTGGGAAGCCTTGATAGAGAGGCCTCCAGCTCATTCTGTTAGCTGATGATCTGAAGCTTTTGCTGATTGAAATGAGCAGGCTGGAAGGTATAGGGGCCTTCGCATTGAGATACTTGTAAATGAGAGCCTGGTGCTCCAGCTCCATCCACTGTGAGGGAGTGAAAGGCCTCTTGGTCCTAGACAACAAGAACCTCTGCTCATTTTCCCTCCCAAAATCCAAACCTGATGGCAATGTGTGAGCAGCCTTGGCGAATCTGAGCATCTTCTGTTCATCAAGAAAGGGGGAAGGGTATGATGCAGCAGCAGCCTGGGTGAAGCTACCAGCAGCAGCTCTCTTGATGAGGCTCAGATCACCCTCCTTGGTGGATGGCACTGTGAGTCCTTGCAAGCCCAACACCTCTCCAAGCTCCATGGCAGCAGCAGAGAAGTCAGCAAACATCTTGGAAGGACAGGAGGAGGGGAGAGGAGGAAGAAGAAGAAGAGGAGAGGGTGAGCATTGCTGGGGACAGTCACAGTGAGGCTGAGGTTGAGAGTGAGGAGGGTGTAGTGTGTGCTTTCTAGTAGGAGGCAGGAAGTGTGTGGTGATATATTATGGGATGGT]

[-] EMBL AK058659             [GCTGAATTCATAAGAACTGAAAATCGCAATTAGCTGGTATTACATTGCAGAAGCTTGAGAACAGAAAGAAGGGAATAACATGCATGGGTAACGCCAATACTAAAGCTATCCCATGGTGAGCTCATTAACGACTTGATCTCCATTTCCTGAAGATTCACATTGCATGATCCTCGAGGTTCAGTAACCAACCATATGGCCTTGCTTCTGGTTTCATGATTGAATCGTCAGGATTTTTGGAGTTTGTCAAGATCTCACCTAGAGGTCCACCTTGAGGCATCTCCCAAGAACTTGAGATGCTATCCTCTTGCATTTGTGCCATATTAGGTGCATGGCAGCTGACGCGTGGGTCCTCTGGCGAGGAATAGAAAGTTGATGGAACTGTCATGACATTGGAATCTTT GCTTTTCT GAAACTCCATTTTCTCGTCCTT AGGCAAGCTGAAATTCTG AAGGACTGACTGAAGGCATCCACGATCATGCATCTTGGTGAAAGGAATGCTTTTGTTGTTCTGCTGGTTGCTGCTCTCCC AAGGCTTC AACATGGTATTTGAAGAAAT CGATTCACTGTCTCCTGCT GTATTGAACTTCTCCGGTTTGTTCTGTTGCTTCAACTGAGAGAACAGGGACAATGTTGGCTGTTGATTCGTTAAATTTAGCAGTGGGCCATTGTTTTCTTCAGCAGCTTTGTTTCCTTTCTCTTTGTTCGCCATTGTCCTGTTCAAACTATCTGTCCAATAGCTGATACTGCGTGGCTTCATTTCATTAACTTTTGCCTTCTTGAAGCTGCCCTGCCCGACAGAAGATGGCAATGAGCCAGCACACGGTGTCTCTTTCACAGTCTTT CTACTTTGGTTTTCCACAGGCTTTCTTGAACGGTGGC GGTTTCTGTTGATGTGCCTCTCACAATACTTGTGGTCGGCCATGGCCTCCTTTGAACACCGCCATTTCTTGCCATCTGTTCGACGGCATCTTCCAGGTTCTGGGTCAGAGTCTGCATTTGGGAAGCCTTGATAGAGAGGCCTCCAGCTCATTCTGTTAGCTGATGATCTGAAGCTTTTGCTGATTGAAATGAGCAGGCTGGAAGGTATAGGGGCCTTCGCATTGAGATACTTGTAAATGAGAGCCTGGTGCTCCAGCTCCATCCACTGTGAGGGAGTGAAAGGCCTCTTGGTCCTAGACAACAAGAACCTCTGCTCATTTTCCCTCCCAAAATCCAAACCTGATGGCAATGTGTGAGCAGCCTTGGCGAATCTGAGCATCTTCTGTTCATCAAGAAAGGGGGAAGGGTATGATGCAGCAGCAGCCTGGGTGAAGCTACCAGCAGCAGCTCTCTTGATGAGGCTCAGATCACCCTCCTTGGTGGATGGCACTGTGAGTCCTTGCAAGCCCAACACCTCTCCAAGCTCCATGGCAGCAGCAGAGAAGTCAGCAAACATCTTGGAAGGACAGGAGGAGGGGAGAGGAGGAAGAAGAAGAAGAGGAGAGGGTGAGCATTGCTGGGGACAGTCACAGTGAGGCTGAGGTTGAGAGTGAGGAGGGTGTAGTGTGTGCTTTCTAGTAGGAGGCAGGAAGTGTGTGGTGATATATTATGGGATGGT]
[+] EMBL AU175045             [                                                                                                                                                                                              ATATGGCCTTGCTTCTGGTTTCATGATTGAATCGTCAGGATTTTTGGAGTTTGTCAAGATCTCACCTAGAGGTCCACCTTGAGGCATCTCCCAAGAACTTGAGATGCTATCCTCTTGCATTTGTGCCATATTAGGTGCATGGCAGCTGACGCGTGGGTCCTCTGGCGAGGAATAGAAAGTTGATGGAACTGTCATGACATTGGAATCTTT GCTTTTCT GAAACTCCATTTTCTCGTCCTT AGGCAAGCTGAAATTCTG AAGGACTGACTGAAGGCATCCACGATCATGCATCTTGGTGAAAGGAATGCTTTTGTTGTTCTGCTGGTTGCTGCTCTCCC AAGGCTTC AACATGGTATTTGAAGAAAT CGATTCACTGTCTCCTGCT GTATTGAACTTCTCCGGTTTGTTCTGTTGCTTCAACTGAGAGAACAGGGACAATGTTGGCTGTTGATTCGTTAAATTTAGCAGTGGGCCATTGTTTTCTTCAGCAGCTTTGTTTCCTTTCTCTTTGTTCGCCATTGTCCTGTTCAAACTATCTGTCCAATAGCTGATACTGCGTGGCTTCATTTCATTAACTTTTGCCTTCTTGAAGCTGCCCTGCCCGACAGAAGATGGCAATGAGCCAGCACACGGTGTCTCTTTCACAGTCTTTCCAACTTTGGTTTTCCACAGGCTTTCTTGAACGGTGGCGGGTTTCTGTTGATGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AU175082             [                                                                                                                                                                                                                                                                                                                                                                                                          ATCTTTGGCTTTNCTGGAANCCCAATTTTCCCGCCCTTNAGGCAAACTGAAATTCTGAAAGGATTNATTAAAGGAATCCACGATCAAGCATCTTGGTGAAAGGAATNCTTTTGTTGTNCTGCTGGTTGCTGTTCTCCCAAAGGNTTCAAACATGGTATTTGAAGAAATNCGATTCACTGTCTCNTGCTGGTATTGAACTTCTCCGGTTGGTTCTGTTGCTTCAACTGAGAGAACAGGGACAATGTTGGCTGTTGATTCGTTAAATTTAGCAGTGGGCCATTGTTTTCTTCAGCAGCTTTGTTTCCTTTCTCTTTGTTCGCCATTGTCCTGTTCAAACTATCTGTCCAATAGCTGATACTGCGTGGCTTCATTTCATTAACTTTTGCCTTCTTGAAGCTGCCCTGCCCGACAGAAGATGGCAATGAGCCAGCACACGGTGTCTCTTTCACAGTCTTT CTACTTTGGTTTTCCACAGGCTTTCTTGAACGGTGGC GGTTTCTGTTGATGTGCCTCTCACAATACTTGTGGTCGGCCATGGCCTCCTTTGAACACCGCCATTTCTTGCCATCTGTTCGACGGCATCTTCCAGGTTCTGGGTCAGAGTCTGCATTTGGGAAGCCTTGATAGAGAGGCCTCCAGCTCATTCTGTTAGCTGATGATCTGAAGCTTTTGCTGATTGAAATGAGCAGGCTGGAAGGTATAGGGGCCTTTGCATTGAGATACTTGTAAATGAGAGCCTGGTGCTCCAGCTCCATCCACTGTGAGGGAGTGAAAGGCCTCTTGGTCCTAGACAACAAGAACCTCTGCTCATTTTCCCTCCCNAAATCCAAACCTGATGGCAATG                                                                                                                                                                                                                                                                                                                                                                               ]




>consensus_9879#1
GCTGAATTCATAAGAACTGAAAATCGCAATTAGCTGGTATTACATTGCAGAAGCTTGAGA
ACAGAAAGAAGGGAATAACATGCATGGGTAACGCCAATACTAAAGCTATCCCATGGTGAG
CTCATTAACGACTTGATCTCCATTTCCTGAAGATTCACATTGCATGATCCTCGAGGTTCA
GTAACCAACCATATGGCCTTGCTTCTGGTTTCATGATTGAATCGTCAGGATTTTTGGAGT
TTGTCAAGATCTCACCTAGAGGTCCACCTTGAGGCATCTCCCAAGAACTTGAGATGCTAT
CCTCTTGCATTTGTGCCATATTAGGTGCATGGCAGCTGACGCGTGGGTCCTCTGGCGAGG
AATAGAAAGTTGATGGAACTGTCATGACATTGGAATCTTTGCTTTTCTGAAACTCCATTT
TCTCGTCCTTAGGCAAGCTGAAATTCTGAAGGACTGACTGAAGGCATCCACGATCATGCA
TCTTGGTGAAAGGAATGCTTTTGTTGTTCTGCTGGTTGCTGCTCTCCCAAGGCTTCAACA
TGGTATTTGAAGAAATCGATTCACTGTCTCCTGCTGTATTGAACTTCTCCGGTTTGTTCT
GTTGCTTCAACTGAGAGAACAGGGACAATGTTGGCTGTTGATTCGTTAAATTTAGCAGTG
GGCCATTGTTTTCTTCAGCAGCTTTGTTTCCTTTCTCTTTGTTCGCCATTGTCCTGTTCA
AACTATCTGTCCAATAGCTGATACTGCGTGGCTTCATTTCATTAACTTTTGCCTTCTTGA
AGCTGCCCTGCCCGACAGAAGATGGCAATGAGCCAGCACACGGTGTCTCTTTCACAGTCT
TTCTACTTTGGTTTTCCACAGGCTTTCTTGAACGGTGGCGGTTTCTGTTGATGTGCCTCT
CACAATACTTGTGGTCGGCCATGGCCTCCTTTGAACACCGCCATTTCTTGCCATCTGTTC
GACGGCATCTTCCAGGTTCTGGGTCAGAGTCTGCATTTGGGAAGCCTTGATAGAGAGGCC
TCCAGCTCATTCTGTTAGCTGATGATCTGAAGCTTTTGCTGATTGAAATGAGCAGGCTGG
AAGGTATAGGGGCCTTCGCATTGAGATACTTGTAAATGAGAGCCTGGTGCTCCAGCTCCA
TCCACTGTGAGGGAGTGAAAGGCCTCTTGGTCCTAGACAACAAGAACCTCTGCTCATTTT
CCCTCCCAAAATCCAAACCTGATGGCAATGTGTGAGCAGCCTTGGCGAATCTGAGCATCT
TCTGTTCATCAAGAAAGGGGGAAGGGTATGATGCAGCAGCAGCCTGGGTGAAGCTACCAG
CAGCAGCTCTCTTGATGAGGCTCAGATCACCCTCCTTGGTGGATGGCACTGTGAGTCCTT
GCAAGCCCAACACCTCTCCAAGCTCCATGGCAGCAGCAGAGAAGTCAGCAAACATCTTGG
AAGGACAGGAGGAGGGGAGAGGAGGAAGAAGAAGAAGAGGAGAGGGTGAGCATTGCTGGG
GACAGTCACAGTGAGGCTGAGGTTGAGAGTGAGGAGGGTGTAGTGTGTGCTTTCTAGTAG
GAGGCAGGAAGTGTGTGGTGATATATTATGGGATGGT

consensusID : consensus_9879#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 669
fasta sequence

                              [TTTTTTTTTTTTTTTTTGGTTCTGATTGCGGCTCGTCGCGGATTTCGCACGGTTTGCTTCGTTCTCGGGGATTTTCTTGAAGCGTCGTCTTCTCCAATCGATCGCTTCCTGTAGCTTCTCCACCCTTCTTCTTTTTTTTGATACAGAGGGGGGTCTTGGAAGCGGCTGGGATTTCGGTTAACAATGCCCTTGGTTTCTAGGGGGAGATATGCCCCCCTCTTGTCTCTTGTGTCTCTTGTGTGTTCACATTGGGCTTGTTCGGTGCCCATTTGATTGTGGATGCCGGGCTGTGAGGACCAACAAACCTCGGTTGTCTATTCTGAAACTTGATTTGTTCCAAGGGGGCACCTGCGCAAACCTCTGATTTCGCCTATAGGCCCCACCCCCCCCCCCCATGCCCCCACTCCTCCCTGCCTCCGCCCCCCTTCTCCTCCCTCCACTCCGACGCTCCTCCGCACGCTACCCCCCCCTCCTAAGTTTCGCCGCCATCTCCCCCGCCCGCGTCGAGCTTCTTCCCCCCTATGCAGGGCCTCACGCAGCACCTCCCTCGTTCGTGACACTCCCTGCTTGCGCGGTGCGCACCCCCCCGCCGCGGTCTGCCGCTCCTCTACTTCGGGCCGACGTCCGAGGCCGCGCCCGGCCGGGGTCCCTCCGGAGAAGGGAGCGCCC]

[+] EMBL CA761782             [TTTTTTTTTTTTTTTTTGGTTCTGATTGCGGCTCGTCGCGGATTTCGCACGGTTTGCTTCGTTCTCGGGGATTTTCTTGAAGCGTCGTCTTCTCCAATCGATCGCTTCCTGTAGCTTCTCCACCCTTCTTCTTTTTTTTGATACAGAGGGGGGTCTTGGAAGCGGCTGGGATTTCGGTTAACAATGCCCTTGGTTTCTAGGGGGAGATATGCCCCCCTCTTGTCTCTTGTGTCTCTTGTGTGTTCACATTGGGCTTGTTCGGTGCCCATTTGATTGTGGATGCCGGGCTGTGAGGACCAACAAACCTCGGTTGTCTATTCTGAAACTTGATTTGTTCCAAGGGGGCACCTGCGCAAACCTCTGATTTCGCCTATAGGCCCCACCCCCCCCCCCCATGCCCCCACTCCTCCCTGCCTCCGCCCCCCTTCTCCTCCCTCCACTCCGACGCTCCTCCGCACGCTACCCCCCCCTCCTAAGTTTCGCCGCCATCTCCCCCGCCCGCGTCGAGCTTCTTCCCCCCTATGCAGGGCCTCACGCAGCACCTCCCTCGTTCGTGACACTCCCTGCTTGCGCGGTGCGCACCCCCCCGCCGCGGTCTGCCGCTCCTCTACTTCGGGCCGACGTCCGAGGCCGCGCCCGGCCGGGGTCCCTCCGGAGAAGGGAGCGCCC]




>consensus_9879#2
TTTTTTTTTTTTTTTTTGGTTCTGATTGCGGCTCGTCGCGGATTTCGCACGGTTTGCTTC
GTTCTCGGGGATTTTCTTGAAGCGTCGTCTTCTCCAATCGATCGCTTCCTGTAGCTTCTC
CACCCTTCTTCTTTTTTTTGATACAGAGGGGGGTCTTGGAAGCGGCTGGGATTTCGGTTA
ACAATGCCCTTGGTTTCTAGGGGGAGATATGCCCCCCTCTTGTCTCTTGTGTCTCTTGTG
TGTTCACATTGGGCTTGTTCGGTGCCCATTTGATTGTGGATGCCGGGCTGTGAGGACCAA
CAAACCTCGGTTGTCTATTCTGAAACTTGATTTGTTCCAAGGGGGCACCTGCGCAAACCT
CTGATTTCGCCTATAGGCCCCACCCCCCCCCCCCATGCCCCCACTCCTCCCTGCCTCCGC
CCCCCTTCTCCTCCCTCCACTCCGACGCTCCTCCGCACGCTACCCCCCCCTCCTAAGTTT
CGCCGCCATCTCCCCCGCCCGCGTCGAGCTTCTTCCCCCCTATGCAGGGCCTCACGCAGC
ACCTCCCTCGTTCGTGACACTCCCTGCTTGCGCGGTGCGCACCCCCCCGCCGCGGTCTGC
CGCTCCTCTACTTCGGGCCGACGTCCGAGGCCGCGCCCGGCCGGGGTCCCTCCGGAGAAG
GGAGCGCCC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9879#0      GCGGCGAGCGCTCGAGCTGGGTGCGCGAGCGGTTGGCGGCGACGGCCGGCGGCCGGCGGC 60
consensus_9879#1      ------------------------------------------------------------
consensus_9879#2      ------------------------------------------------------------
                                                                                  

consensus_9879#0      GAGGTCGAGCGAGGAGGCGGGCCGGCGAGGCGCGCGGTACTTTGTGCCTCGAAACGAGTG 120
consensus_9879#1      ------------------------------------------------------------
consensus_9879#2      ------------------------------------------------------------
                                                                                  

consensus_9879#0      GGCCTTTATTTTTTTTTTGGTTCTGTTTCGGCTCGTCGCGGATTTCGCACGGTTTGCTTC 180
consensus_9879#1      ------------------------------------------------------------
consensus_9879#2      ------------------------------------------------------------
                                                                                  

consensus_9879#0      GTTCTTGGTGATTTTCTTGAAGCGTCGTCTTCTCCAATCGATCGCTTCCTGTAGCTTCTC 240
consensus_9879#1      ------------------------------------------------------------
consensus_9879#2      ------------------------------------------------------------
                                                                                  

consensus_9879#0      CACCCTTCTTCTGTGGTGGATACAGATTTGTTCTTGGAAGCGGCTGGGATTTCGGTTAAC 300
consensus_9879#1      ------------------------------------------------------------
consensus_9879#2      ------------------------------------------------------------
                                                                                  

consensus_9879#0      GATGCCATTGGTTTCTATTCTAACATATGCTTTCTCTTGTCTCTTGTGTCTCTTGTGTGT 360
consensus_9879#1      ------------------------------------------------------------
consensus_9879#2      ------------------------------------------------------------
                                                                                  

consensus_9879#0      TCAGATTGGGCTTGTTGGTGTCGGATTTGATTGTGGTTTCGTGGCTGTGATGACAATCAA 420
consensus_9879#1      ------------------------------------------------------------
consensus_9879#2      ------------------------------------------------------------
                                                                                  

consensus_9879#0      ACCTCGTTTCTCGATGCTGAGACTTGATTTGTTCAAGGACCAGAACTGTGCTGACCTTAA 480
consensus_9879#1      ------------------------------------------------------------
consensus_9879#2      ------------------------------------------------------------
                                                                                  

consensus_9879#0      TTTGTGCGTGTCTGAGCCACCCCAAACACACCATGTCCGAATCGATTTCTGCGAAAGTTA 540
consensus_9879#1      ------------------------------------------------------------
consensus_9879#2      ------------------------------------------------------------
                                                                                  

consensus_9879#0      GTATGTCTGCACGATGCCACTCGATGCTACTACTAGTATTTAGGTGTCTTTATTAGCTTT 600
consensus_9879#1      ------------------------------------------------------------
consensus_9879#2      ------------------------------------------------------------
                                                                                  

consensus_9879#0      TTCCTCTTCTATGTTTATTGGCTGTTTCTTGCATTTGCGTTGTTGTAGTGTGGCTGTGAG 660
consensus_9879#1      ------------------------------------------------------------
consensus_9879#2      ------------------------------------------------------------
                                                                                  

consensus_9879#0      GACTAACTACTTTGTTTCTCGATGCTGACTTGATTCAATCAATCAAGGACCAAAAAAATT 720
consensus_9879#1      ------------------------------------------------------------
consensus_9879#2      ------------------------------------------------------------
                                                                                  

consensus_9879#0      TGATGACCTTTGTGCGTGTCTGAGCCACTGCAACTCAGTTTTTTCAGTCTTCGCTTGTGT 780
consensus_9879#1      ------------------------------------------------------------
consensus_9879#2      ------------------------------------------------------------
                                                                                  

consensus_9879#0      GAAGATATCATCTTGCCTTCCGTGTTTTGAGCCTGAACGATAAAGAAGAGATGTTTCTTG 840
consensus_9879#1      ------------------------------------------------------------
consensus_9879#2      ------------------------------------------------------------
                                                                                  

consensus_9879#0      GTGCTGATTCGACTCATTTTAGGATGGAATTTTGACGAGGCTCATGCGTGTCTGAAGTCT 900
consensus_9879#1      ------------------------------------------------------------
consensus_9879#2      ------------------------------------------------------------
                                                                                  

consensus_9879#0      GAACCATTGTAAAACTTGGATGTAGTTGTTGTTTTAGGTGTCTGAAGTCTGAACCATTGT 960
consensus_9879#1      ------------------------------------------------------------
consensus_9879#2      ------------------------------------------------------------
                                                                                  

consensus_9879#0      AAAACTTGGACGTAGTTGTTGTTTTTTTTCCTAAAAAAAGAGAACTTTTTTCTCTCGTTT 1020
consensus_9879#1      ------------------------------------------------------------
consensus_9879#2      ------------------------------------------------------------
                                                                                  

consensus_9879#0      TTTCTCTGCTGTATTTGAATTTGTTCATTTTTTCCAGCTGTTGTACACTTGTACTTCATA 1080
consensus_9879#1      ------------------------------------------------------------
consensus_9879#2      ------------------------------------------------------------
                                                                                  

consensus_9879#0      TTGGGATACTGAATGTTAGGTGCGATCAATGTAGTAGTGCTTGCATGTTTGACAAACTCA 1140
consensus_9879#1      ------------------------------------------------------------
consensus_9879#2      ------------------------------------------------------------
                                                                                  

consensus_9879#0      TGGACATTAACTCAAGTTATCTAAAACATTGAGATCCTTGGAATAGTTATGCTGGAACTA 1200
consensus_9879#1      ------------------------------------------------------------
consensus_9879#2      ------------------------------------------------------------
                                                                                  

consensus_9879#0      TTGCATGGAAATTTTACAACTCGCTATATGCTAGAAGCGAATCCCCGTAGTTCATTTTCC 1260
consensus_9879#1      ------------------------------------------------------------
consensus_9879#2      ------------------------------------------------------------
                                                                                  

consensus_9879#0      TCAATCAGCCCAGTAGATTTCTAGCTAATGGTATCTGATAAGGGGCAAATTGTTTTTTCA 1320
consensus_9879#1      ------------------------------------------------------------
consensus_9879#2      ------------------------------------------------------------
                                                                                  

consensus_9879#0      AGGATACAGCTGAATTCATAAGAACTGAAAATCGCAATTAGCTGGTATTACATTGCAGAA 1380
consensus_9879#1      --------GCTGAATTCATAAGAACTGAAAATCGCAATTAGCTGGTATTACATTGCAGAA 52
consensus_9879#2      ------------------------------------------------------------
                                                                                  

consensus_9879#0      GCTTGAGAACAGAAAGAAGGGAATAACATGCATGGGTAACGCCAATACTAAAGCTATCCC 1440
consensus_9879#1      GCTTGAGAACAGAAAGAAGGGAATAACATGCATGGGTAACGCCAATACTAAAGCTATCCC 112
consensus_9879#2      ------------------------------------------------------------
                                                                                  

consensus_9879#0      ATGGTGAGCTCATTAACGACTTGATCTCCATTTCCTGAAGATTCACATTGCATGATCCTC 1500
consensus_9879#1      ATGGTGAGCTCATTAACGACTTGATCTCCATTTCCTGAAGATTCACATTGCATGATCCTC 172
consensus_9879#2      ------------------------------------------------------------
                                                                                  

consensus_9879#0      GAGGTTCAGTAACCAACCATATGGCCTTGCTTCTGGTTTCATGATTGAATCGTCAGGATT 1560
consensus_9879#1      GAGGTTCAGTAACCAACCATATGGCCTTGCTTCTGGTTTCATGATTGAATCGTCAGGATT 232
consensus_9879#2      ------------------------------------------------------------
                                                                                  

consensus_9879#0      TTTGGAGTTTGTCAAGATCTCACCTAGAGGTCCACCTTGAGGCATCTCCCAAGAACTTGA 1620
consensus_9879#1      TTTGGAGTTTGTCAAGATCTCACCTAGAGGTCCACCTTGAGGCATCTCCCAAGAACTTGA 292
consensus_9879#2      ------------------------------------------------------------
                                                                                  

consensus_9879#0      GATGCTATCCTCTTGCATTTGTGCCATATTAGGTGCATGGCAGCTGACGCGTGGGTCCTC 1680
consensus_9879#1      GATGCTATCCTCTTGCATTTGTGCCATATTAGGTGCATGGCAGCTGACGCGTGGGTCCTC 352
consensus_9879#2      ------------------------------------------------------------
                                                                                  

consensus_9879#0      TGGCGAGGAATAGAAAGTTGATGGAACTGTCATGACATTGGAATCTTTGCTTTTCTGAAA 1740
consensus_9879#1      TGGCGAGGAATAGAAAGTTGATGGAACTGTCATGACATTGGAATCTTTGCTTTTCTGAAA 412
consensus_9879#2      ------------------------------------------------------------
                                                                                  

consensus_9879#0      CTCCATTTTCTCGTCCTTAGGCAAGCTGAAATTCTGAAGGACTGACTGAAGGCATCCACG 1800
consensus_9879#1      CTCCATTTTCTCGTCCTTAGGCAAGCTGAAATTCTGAAGGACTGACTGAAGGCATCCACG 472
consensus_9879#2      ------------------------------------------------------------
                                                                                  

consensus_9879#0      ATCATGCATCTTGGTGAAAGGAATGCTTTTGTTGTTCTGCTGGTTGCTGCTCTCCCAAGG 1860
consensus_9879#1      ATCATGCATCTTGGTGAAAGGAATGCTTTTGTTGTTCTGCTGGTTGCTGCTCTCCCAAGG 532
consensus_9879#2      ------------------------------------------------------------
                                                                                  

consensus_9879#0      CTTCAACATGGTATTTGAAGAAATCGATTCACTGTCTCCTGCTGTATTGAACTTCTCCGG 1920
consensus_9879#1      CTTCAACATGGTATTTGAAGAAATCGATTCACTGTCTCCTGCTGTATTGAACTTCTCCGG 592
consensus_9879#2      ------------------------------------------------------------
                                                                                  

consensus_9879#0      TTTGTTCTGTTGCTTCAACTGAGAGAACAGGGACAATGTTGGCTGTTGATTCGTTAAATT 1980
consensus_9879#1      TTTGTTCTGTTGCTTCAACTGAGAGAACAGGGACAATGTTGGCTGTTGATTCGTTAAATT 652
consensus_9879#2      ------------------------------------------------------------
                                                                                  

consensus_9879#0      TAGCAGTGGGCCATTGTTTTCTTCAGCAGCTTTGTTTCCTTTCTCTTTGTTCGCCATTGT 2040
consensus_9879#1      TAGCAGTGGGCCATTGTTTTCTTCAGCAGCTTTGTTTCCTTTCTCTTTGTTCGCCATTGT 712
consensus_9879#2      ------------------------------------------------------------
                                                                                  

consensus_9879#0      CCTGCAAATGTGTACAGGTCTTCAAATTAAATGATTATTACTTTCTATTAAAACTGAAAT 2100
consensus_9879#1      CCTG-------------------------------------------------------- 716
consensus_9879#2      ------------------------------------------------------------
                                                                                  

consensus_9879#0      AATCTAGTTGTTTTCCTTTGTCCCTGACTATATTGCAGCATTTGTATTCCATTCTTTATA 2160
consensus_9879#1      ------------------------------------------------------------
consensus_9879#2      ------------------------------------------------------------
                                                                                  

consensus_9879#0      AGAGATTTTTTTCCACCAGAACCACAACGATTACCTTCTATCATGAAAATGTACCAGAAA 2220
consensus_9879#1      ------------------------------------------------------------
consensus_9879#2      ------------------------------------------------------------
                                                                                  

consensus_9879#0      ATCTTAAACCATCAATAGGATATGCAAAAATGGTGGAAAAAAATACTGTGATTCAGTCTG 2280
consensus_9879#1      ------------------------------------------------------------
consensus_9879#2      ------------------------------------------------------------
                                                                                  

consensus_9879#0      TAGCACTAAAATACTTGCACGTTGAGAATATTAAACCAAGTTTAAGGATGTATTAACCTG 2340
consensus_9879#1      ------------------------------------------------------------
consensus_9879#2      -----------------------------------------------------------T 1
                                                                                  

consensus_9879#0      TTCAAACTATCTGTCCAATAGCTGATACTGCGTGGCTTCATTTCATTAACTTTTGCCTTC 2400
consensus_9879#1      TTCAAACTATCTGTCCAATAGCTGATACTGCGTGGCTTCATTTCATTAACTTTTGCCTTC 776
consensus_9879#2      TTTTTTTTTTTTTTTTGGTTCTGATTGCGGCTCGTCGCGGATTTCGCACGGTTTGCTTCG 61
                      **     * * * *    *      * * **  * *     **    *   ***** *  

consensus_9879#0      TTGAAGCTGCCCTGCCCGACAGAAGATGGCAATGAGCCA---GCACACGGTGTCTCTTTC 2457
consensus_9879#1      TTGAAGCTGCCCTGCCCGACAGAAGATGGCAATGAGCCA---GCACACGGTGTCTCTTTC 833
consensus_9879#2      TTCTCGGGGATTTTCTTGAAGCGTCGTCTTCTCCAATCGATCGCTTCCTGTAGCTTCTCC 121
                      **   *  *   * *  **       *       *  *    **   * **  **  * *

consensus_9879#0      ACAGTCTTTCTACTTTGGTTTTCCACAGGCTCTCTTGAA--CGGTGGCGGTTTCTGTTGA 2515
consensus_9879#1      ACAGTCTTTCTACTTTGGTTTTCCACAGGCTTTCTTGAA--CGGTGGCGGTTTCTGTTGA 891
consensus_9879#2      ACCCTTCTTCTTTTTTTTGATACAGAGGGGGGTCTTGGAAGCGGCTGGGATTTCGGTTAA 181
                      **  *  ****  ***    * *    **   ***** *  ***  * * **** *** *

consensus_9879#0      TGTGCCTCTCACAATACTTGTGGTCGGCCATGGCCTCCTTTGAACACCGCCATTTCTTGC 2575
consensus_9879#1      TGTGCCTCTCACAATACTTGTGGTCGGCCATGGCCTCCTTTGAACACCGCCATTTCTTGC 951
consensus_9879#2      CAATGCCCTTG--GTTTCTAGGGGGAGATATGCCCCCCTCTTGTCTCTTGTGTCTCTTG- 238
                           * **     *   *  **   *  *** ** *** *   * *     * ***** 

consensus_9879#0      CATCTGTTCGACGGCATCTTCCAGGTTCTGGGTCAGAGTCTGCATTTGGGAAGCCTTGAT 2635
consensus_9879#1      CATCTGTTCGACGGCATCTTCCAGGTTCTGGGTCAGAGTCTGCATTTGGGAAGCCTTGAT 1011
consensus_9879#2      --TGTGTTCA----CATTGGGCTTGTTCGGTGCCCA--TTTG-ATTGTGGATGCCGGGCT 289
                        * *****     ***    *  **** * * *    * ** ***  *** ***  * *

consensus_9879#0      AGAGAGGCCTCCAGCTCACTGCAGTACAATAAGTGAACAGAAAAAAACACTGTCCATCAT 2695
consensus_9879#1      AGAGAGGCCTCCAGCTCATTCTGTTA--GCTGATGATCTGAAGCTTTTGCTGATTGAAAT 1069
consensus_9879#2      GTGAGGACCAACAAACC--TCGGTT---GTCTAT--TCTGAAACTTGATTTGTTCCAAGG 342
                           * **  **   *  *    *        *   * ***        **        

consensus_9879#0      GAGTTG-CAGAGAAATACACAGATCAATGGCCTTACATAC--ATACATGCACACATGATC 2752
consensus_9879#1      GAGCAGGCTGGAAGGTATAGGGGCCTTCGCATTGAGATACTTGTAAATGAGAGCCTGGTG 1129
consensus_9879#2      GGGCACCTGCGCAAACCTCTGA--TTTCGCCTATAGGCCC---CACCCCCCCCCCCCATG 397
                      * *         *               *     *    *    *        *    * 

consensus_9879#0      TTTGCTTCTAACCTATTGCAAGTTAATAACA-------TGG-----------AAGTGTGT 2794
consensus_9879#1      CTCCAGCTCCATCCACTGTGAGGGAGTGAAAGGCCTCTTGGTCCTAGACAACAAGAACCT 1189
consensus_9879#2      CCCCCACTCCTCCCTGCCTCCGCCCCCCTTCTCCTCCCTCCACTCCG-----ACGCTCCT 452
                                  *        *                *             * *    *

consensus_9879#0      ATGTATGTGGTGATGAGCAAGG-CCAGACCTGATGGCAATGTGTGAGCAGCCTTGGCGAA 2853
consensus_9879#1      CTGCTCATTTTCCCTCCCAAAATCCAAACCTGATGGCAATGTGTGAGCAGCCTTGGCGAA 1249
consensus_9879#2      CCGCACGCTACCCCCCCCT---CCTAAGTTTCGCCGCCATCTC-------CCCCGCCCGC 502
                        *              *     * *    *    ** ** *        **  * *   

consensus_9879#0      TCTGAGCATCTTCTGTTCATCAAGAAAGGGGGAAGGGTATGATGCAGCAGCAGCCTGGGT 2913
consensus_9879#1      TCTGAGCATCTTCTGTTCATCAAGAAAGGGGGAAGGGTATGATGCAGCAGCAGCCTGGGT 1309
consensus_9879#2      GTCGAGCTTCTTCCCCCCTAT----------GCAGGGCCTCACGCAGCACCTCCCTCGTT 552
                         **** *****    *             * ****  * * ****** *  *** * *

consensus_9879#0      GAAGCTACCAGCAGCAGCTCTCTTGATGAGGCTCAGATCACCCT-CCTTGGTGGATGGCA 2972
consensus_9879#1      GAAGCTACCAGCAGCAGCTCTCTTGATGAGGCTCAGATCACCCT-CCTTGGTGGATGGCA 1368
consensus_9879#2      CGTGACACT--------CCCTGCTTGCGCGGTGCGCACCCCCCCGCCGCGGTCTGCCGCT 604
                         *  **         * **  *   * **  *  * * ***  **  ***     ** 

consensus_9879#0      CTGTGAGTCCTTGC--AAGCCCAACACCTCTCCAAGCTCCATGGCAGCAGCAGAGAAGTC 3030
consensus_9879#1      CTGTGAGTCCTTGC--AAGCCCAACACCTCTCCAAGCTCCATGGCAGCAGCAGAGAAGTC 1426
consensus_9879#2      CCTCTACTTCGGGCCGACGTCCGAGGCCGCGCCCGGC--CGGGGTCCCTCCGGAGAAGGG 662
                      *    * * *  **  * * ** *  ** * **  **  *  **   *  * ******  

consensus_9879#0      AGCAAACATCTTGGAAGGACAGGAGGAGGGGAGAGGAGGAAGAAGAAGAAGAGGAGGGGG 3090
consensus_9879#1      AGCAAACATCTTGGAAGGACAGGAGGAGGGGAGAGGAGGAAGAAGAAGAAGAGGAGAGGG 1486
consensus_9879#2      AGCGCCC----------------------------------------------------- 669
                      ***   *                                                     

consensus_9879#0      TGAGCATTGCTGGGGACAGTCACAGTGAGGCTGAGGTTGAGAGTGAGGAGGGTGTAGTGT 3150
consensus_9879#1      TGAGCATTGCTGGGGACAGTCACAGTGAGGCTGAGGTTGAGAGTGAGGAGGGTGTAGTGT 1546
consensus_9879#2      ------------------------------------------------------------
                                                                                  

consensus_9879#0      GTGCTTTCTAGTAGGAGGCAGGAAGTGTGTGGTGATATATTATGGGATGGTGGCTCTTTG 3210
consensus_9879#1      GTGCTTTCTAGTAGGAGGCAGGAAGTGTGTGGTGATATATTATGGGATGGT--------- 1597
consensus_9879#2      ------------------------------------------------------------
                                                                                  

consensus_9879#0      GGAGACTAGAGGTAGGGCTAGGTGGTGGCCCTTAAATAGCAGGAGTCCTTTCATTCTTTT 3270
consensus_9879#1      ------------------------------------------------------------
consensus_9879#2      ------------------------------------------------------------
                                                                                  

consensus_9879#0      AGTGGAGTAACTTTTTTTGCTGTCATTTCTTTATTTTATTTTTATTTTATTGATTTTTTG 3330
consensus_9879#1      ------------------------------------------------------------
consensus_9879#2      ------------------------------------------------------------
                                                                                  

consensus_9879#0      GGCTCAATGTTTCTGTGAAGTGATACTGCTGGGTACTGATGGGGAGGAGTAATTGGTTCA 3390
consensus_9879#1      ------------------------------------------------------------
consensus_9879#2      ------------------------------------------------------------
                                                                                  

consensus_9879#0      TAAAAAGGTAGTAGTAGCAGCAGCAAAAAAAAAAAAAAAA 3430
consensus_9879#1      ----------------------------------------
consensus_9879#2      ----------------------------------------