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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9881#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1274 fasta sequence
[ACGTGATCAGAAGCAAAGCTAGCGTGCGTTTGCAATGGCGGCAGTGGTGACCAACAGGAGGGTGATCCTGAAGAGGTACGTGACAGGGCTCCCATCGGAGGACGACATGGAGGTGGTGACGGCGAAGA-GANCGCTGGCCGTGCCGGCTGGGTCGGAGGCGGTGATGGTGAAGAACCTGTACGTCTCGTGTGACCCTTACATGCGTGGCCGGATGACCCGTCACGAGGTGCCCAGCTACGTTCCCGACTACGTACCAGGAGAGGTTATCACTAATTGTGGCGTGATGAAGGTGGTATCATCTGGGCACCCGGATTTCAAGGATGGAGACCTTGTTTGGGGAGTAACCGGATGGGAAGAATACANCCTGGTTAACAATCCCAAGCCTTATTTGCATAAGATCAATTACCCTGAATTTCCTCTATCTTACTACACCGGTGTTCTTGGAATAGCTGGGCTTACTGCCTATGGTGGGTTCTTTGAGGTCTCCAAGCCTAAGAAAGGCGACTATGTTTTCGTCTCCGCGGCATCCGGTGCCGTAGTCAAGCTGCTCAAAACTAAGTTTGGCTTTCATGACGCGTTCAACTACAAGAAGGAGCTGGACCTGGAGGGAGCCCTTAAAAGGTGCTTCCCGGACGGCATCGACATCTACTTTGATAACGTGGGTGGTGCAATGTTGGACGCCGTGCTGCCGAACATGCGTATCGGCGGCAAGATAACGATATGTGGGATGATCTCGCAATATAACCTGGAGCGGCCAGACGGGGTGCGGAACCTCTTCTACTTATTCGCCAAGAGCCTACGGATGGAGGGGTTCCTGGTGAGCAACTACATTGCAATATACCACCGGTA-TGAGAA-GGAGATGGCAGGATACCTGAGGGAA-GGAAAGGTGGTGTATGTGGAGGACATCGTTGAAGGGCTCGAGGCGGCACCGGNAGCTCTCATNGGGCTATTCANTGGCCGAAATGTCGGNAAGCAACTGGGTCACCATTGCACGGGAGTGATGTCGTTGGTTGCATTGGTATGTACTACCTCTGTCCCGAAATATTACAATTTTTAGCTACGAATCTGGACATATAGGTGACCAGATTCATAGCTAAAAATTGCTATATTTTGGGACGGAGGTAGTACGTACTAACCATACTTATTTATGAAATCTGAAATGGATGTCTTGTTTGTTTTGTCGGGTTCAGAAATATGAGATAAAATATTGTGCCGGGCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL OSS15155A [ACGTGATCAGAAGCAAAGCTAGCGTGCGTTTGCAATGGCGGCAGTGGTGACCAACAGGAGGGTGATCCTGAAGAGGTACGTGACAGGGCTCCCATCGGAGGACGACATGGAGGTGGTGACGGCGAAGA GACCGCTGGCCGTGCCGGCTGGGTCGGAGGCGGTGATGGTGAAGAACCTGTACGTCTCGTGTGACCCTTACATGCGTGGCCGGATGACCCGTCACGAGGTGCCCAGCTACGTTCCCGACTACGTACCAGGAGAGGTTATCACTAATTGTGGCGTGATGAAGGTGGTATCATCTGGGCACCCGGATTTCAAGGATGGAGACCTTGTTTGGGGAGTAACCGGATGGGAAGAATACANCCTGGTTAACAATCCCAAGNCTTATTTGCATAAGATCAATTACCCTGAATTTCCTCTATCTTACTACAACNGTGTTCTT ]
[+] EMBL OSR32491A [ AATGGCGGCAGTGGTGACCAACAGGAGGGTGATCCTGAAGAGGTACGTGACAGGGCTCCCATCGGAGGACGACATGGAGGTGGTGACGGCGAAGACGANCGCTGGCCGTGCCGGCTGGGTCGGAGGCGGTGATGGTGAAGAACCTGTACGTCTCGTGTGACCCTTACATGCGTGGCCGGATGACCCGTCACGAGGTGCCCAGCTACGTTCCCGACTACGTACCAGGAGAGGTTATCACTAATTGTGGCGTGATGAAGGTGGTATCATCTGGGCACCCGGATTTCAAGGATGGAGACCTTGTTTGGGGAGTAACCGGATGGGAAGAATACAACCTGGTTAACAATNCCAAGCCTTATTTGCATAAGATCAATTACCCTGAATTTTCTCTATCTTACTACACCGGTGTTTTT ]
[+] EMBL OSR3067A [ AATGGCGGCAGTGGTGACCAACAGGAGGGTGATCCTGAAGAGGTACGTGACAGGGCTCCCATCGGAGGACGACATGGAGGTGGTGACGGCGAAGA GAACGCTGGCCGTGCCGGCTGGGTCGGAGGCGGTGATGGTGAAGAACCTGTACGTCTCGTGTGACCCTTACATGCGTGGCCGGATGACCCGTCACGAGGTGCCCAGCTACGTTCCCGA ]
[+] EMBL AU031332 [ ACCCGGATTTCAAGGATGGAGACCTTGTTTGGGGAGTAACCGGATGGGAAGAATACACCCTGGTTAACAATCCCAAGCCTTATTTGCATAAGATCAATTACCCTGAATTTCCTCTATCTTACTACACCGGTGTTCTAGGAATAGCTGGGCTTACTGCCTATGGTGGGTTCTTTGAGGTCTCCAAGCCTAAGAAAGGCGACTATGTTTTCGTCTCCGCGGCATCCGGTGCCGTAGTCAAGCTGCTCAAAACTAAGTTTGGCTTTCATGACGCGTTCAACTACAAGAAGGAGCTGGACCTGGAGGGAGCCCTTAAAAGGTGCTTCCCGGACGGCATCGACATCTACTTTGATAACGTGGGTGGTGCAATGTTGGACGCCGTGCTGCCGAACATGCGTATCGGCGGCAAGATAACGATATGTGGGATGATCTCGCAATATAACCTGGAGCGGCCAGACGGGGTGCGGAACCTCTTCTACTTATTCGCCAAGAGCCTACGGATGGAGGGGTTCCTGGTGAGCAACTANATTGCAATATACCACCGGTA TGAGAA GGAGATGGCAGGATACCTGAGGGAA GGAAANGTGGTGTATGTGGAGGACATCGTTGAAGGGCTCGAGGCGGCACCGGNAGCTCTCATNGGGCTATTCANTGGCCGAAATGTCGGNAAGCAACTGGGTCACCATT ]
[+] EMBL OSS14503A [ TGCTCAAAACTAAGTTTGGCTTTCATGACGCGTTCAACTACAAGAAGGAGCTGGACCTGGAGGGAGCCCTTAAAAGGTGCTTCCCGGACGGCATCGACATCTACTTTGATAACGTGGGTGGTGCAATGTTGGACGCCGTGCTGCCGAACATGCGTATCGGCGGCAAGATAACGATATGTGGGATGATCTCGCAATATAACCTGGAGCGGCCAGACGGGGTGCGGAACCTCTTCTACTTATTCGCCAAGAGCCTACGGATGGAGGGGTTCCTGGTGAGCAACTACATTGCAATATACCACCGGTATTGAGAAGGGAGATGGCAGGATACCTGAGGGAAGGGAAAGGTG ]
[+] EMBL AU078061 [ GCTTCCCGGACGGCATCGACATCTACTTTGATAACGTGGGTGGTGCAATGTTGGACGCCGTGCTGCCGAACATGCGTATCGGCGGCAAGATAACGATATGTGGGATGATCTCGCAATATAACCTGGAGCGGCCAGACGGGGTGCGGAACCTCTTCTACTTATTCGCCAAGAGCCTACGGATGGAGGGGTTCCTGGTGAGCAACTACATTGCAATATACCACCGGTA TGAGAA GGAGATGGCAGGATACCTGAGGGAA GGAAAGGTGGTGTATGTGGAGGACATCGTTGAGGGGCTCGAGGCGGCACCGGCAGCTCTCATTGGGCTATTCACTGGCCGCAATGTCGGCAAGCAGCT GGTCACCATTGCACGGGAGTGATGTCGTTGGTTGCATTGGTATGTACTACCTCTGTCCCGAAATATTACAATTTTTAGCTACGAATCTGGACATATAGGTGACCAGATTCATAGCTAAAAATTGCTATATTTTGGGACGGAGGTAGTACGTACTAACCATACTTATTTATGAAATCTGAAATGGATGTCTTGTTTGTTTTGTCGGGTTCAGAAATATGAGATAAAATATTGTGCCGGGCTAAAAAAAAAAAAA ]
[+] EMBL AU031333 [ TGTCGTTGGTTGCATTGGTATGTACTNCCTCTGTCCCGAAATNTTACAATTTTTAGCTACGAATCTGGNCATNTAGGTGACCAGATTCATAGCTAAAAATTGCTATATTTTGGGACGGAGGTAGTACGTACTANCCATACTTATTTATGAAATCTGAAATGGATGTCTTGTTTGTTTTGTCGGGTTCAGAAATNTGNGATAAAATATTGTGCCGGGCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||