cluster # 9886

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Oryza sativa
cluster # 9886 cluster # 9886 Sequences # 7 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9886#0 length = 2012 sequences # 7
consensusID : consensus_9886#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 2012
fasta sequence
                              [CTTCCTGCCTTGCCTCCTCGTCTCCTTCTCTGCTGCTCTCCAAGCTCTTCCTGCTTCCATCAGGTTGTCTCGAGAAAGATTGGAGTTTTTGGTGGTTTGGGTTGTGCGGTTCTTGCTTTTGTTGGCGCAAGCGCATGGCTGGTTCTGGGACATAGTGAGCTGAGATAGAGTTCTTGTGTTCGGTGGAGTTTGGCTTTGGTGAATCTTCGATTCAAGTCTGGAGATGGCGCGTTTTCAGGAAACCAAGGCGAGGAATGATCAAGGACCTGTTGCTGATCATGTTGGGCACCGAAACCTCATGGAAAACCTCACAGATCCTCTGGATTCCAGTGGCATGGACATGATGGACGAAGCGCGAATTCCTAAGGCGCGGAAGCCATACACGATAACGAAGCAAAGGGAGAAATGGACCGAGGACGAACATAAGCTGTTCTTGGAAGCCCTGCAGCTCCATGGCCGAGCCTGGCGACGCATCCAAGAGCACATAGGCACCAAGACTGCCGTGCAGATCAGGAGCCACGCACAGAAGTTCTTCTCCAAGGTCATCAAAGAATCATCTGGGGACAATTGCAACAGCTT-GGGTGCTGCATCATCAATTCAGATTCCCCCGCCGCGGCCGAAGCGTAAGCCTGTTCATCCGTACCCACGCAATCTAGGGAGCACAGCCAGCAAGAACGTCCCTGCACTGAAACAGCTAGAGAAGCCTCAGCTGCAGGTGCAGTCTCTCTACGACCAGGACAATGGGTCGCCGACGTCAGTGTTAACAGTACCACAGATACGGGCTGATACACTGGGAAGTGAGAGTGGTGGGTCGCCAACCTCGACGATTGATATTGAAGAGAGATGTCCTACACCAAGCATAGCAACTGCTGAGTTAGCTATGGAGTTGCCTCCTACAAATGACGAGGAGGTCAAGGGCAATGGCGATCATGAAGAAGTTACATGTGACAGATCAGGAGTTCCAGTCCTTAGGCTATTTGGCAAGAGGGTTATGGTGAATGATTTACATCAGATGTCAGCCCCTGATGCCGGGAACCTGCAAACTGTGGCAGACATGGAAGTGGACGCTTCAGCTGAGACACCAACTAGTGGAACTGGGAAATTCTCTTCCCATGGTGCAGCAGAAGCAAATACATGGAACCCATGGCTGACTAACACACAGCAGTTTCTGTATTATCTTCCTAACGGACAAATTTTCTCCGTGCATTCTGCTCTCCCATGCTTCACCTACCATAATGAGGGTGTTACTTGCACCCAG-TTTT--CAAACCCACAGGTGGTAGCCTCAGATCAGCAGCATCAACACCAAACTTCTGAAGCTGTAGATTACAAGGGTATACAGAGGGAAGGATCTTGGACGGAGTCAAATACATCCTCAAGCAGTGTGCCTGAAACAGCAACTCATAATTCAGAGACTACAGAATCATATAGAAACGGAAACAGAAACGAAGATGAAATGGTACCTTCTCCAGATTCAAGAAAATGTGTGAGCCCAGGTTCCAACTGCAGGCGAGGCTTTGTGCCGTACAAGAGATGTGTTGCTGATAGTGAGGCGCTGCTGAAGTCACAGGCGCCTCAGGAGGAGGCAGACGGAGAGATGACGAGGCTGTGCTTATAAATTTTTGGAGCCTCGTAGATCACTGCAACTATAGATGCTTGCTACTAATATTTTGTTCACAGATGAGTAGGAACTGATGTACTGCAGGAGGGGCTGCTTTCCTGTTACAAGAGGCAGATTGAAACCGCGTTAGTACTCCACAAAACAGGGAGTGG-CCGTGGTTCTTGTCTGGCCATGTACAGTTCAAATATTCTATGTTTCCATTTTCCTCGTCGTGTGTTTGTAATTTCGCTCCCATTGCGGGAGCGTTCAGAGGTCAATGGCTGTCATGCAATGACAAGTATTTTGATAGAGTTGTAGAAGGGTTGTACTGATGTAAATTATACAGTAACTTATTATCTGTAAGACAATAACAGGCGAGCTAAAGAAAACAACGTTGGAAAGCTTTGTTCAAAAA]

[+] EMBL AK101209             [CTTCCTGCCTTGCCTCCTCGTCTCCTTCTCTGCTGCTCTCCAAGCTCTTCCTGCTTCCATCAGGTTGTCTCGAGAAAGATTGGAGTTTTTGGTGGTTTGGGTTGTGCGGTTCTTGCTTTTGTTGGCGCAAGCGCATGGCTGGTTCTGGGACATAGTGAGCTGAGATAGAGTTCTTGTGTTCGGTGGAGTTTGGCTTTGGTGAATCTTCGATTCAAGTCTGGAGATGGCGCGTTTTCAGGAAACCAAGGCGAGGAATGATCAAGGACCTGTTGCTGATCATGTTGGGCACCGAAACCTCATGGAAAACCTCACAGATCCTCTGGATTCCAGTGGCATGGACATGATGGACGAAGCGCGAATTCCTAAGGCGCGGAAGCCATACACGATAACGAAGCAAAGGGAGAAATGGACCGAGGACGAACATAAGCTGTTCTTGGAAGCCCTGCAGCTCCATGGCCGAGCCTGGCGACGCATCCAAGAGCACATAGGCACCAAGACTGCCGTGCAGATCAGGAGCCACGCACAGAAGTTCTTCTCCAAGGTCATCAAAGAATCATCTGGGGACAATTGCAACAGCTT GGGTGCTGCATCATCAATTCAGATTCCCCCGCCGCGGCCGAAGCGTAAGCCTGTTCATCCGTACCCACGCAATCTAGGGAGCACAGCCAGCAAGAACGTCCCTGCACTGAAACAGCTAGAGAAGCCTCAGCTGCAGGTGCAGTCTCTCTACGACCAGGACAATGGGTCGCCGACGTCAGTGTTAACAGTACCACAGATACGGGCTGATACACTGGGAAGTGAGAGTGGTGGGTCGCCAACCTCGACGATTGATATTGAAGAGAGATGTCCTACACCAAGCATAGCAACTGCTGAGTTAGCTATGGAGTTGCCTCCTACAAATGACGAGGAGGTCAAGGGCAATGGCGATCATGAAGAAGTTACATGTGACAGATCAGGAGTTCCAGTCCTTAGGCTATTTGGCAAGAGGGTTATGGTGAATGATTTACATCAGATGTCAGCCCCTGATGCCGGGAACCTGCAAACTGTGGCAGACATGGAAGTGGACGCTTCAGCTGAGACACCAACTAGTGGAACTGGGAAATTCTCTTCCCATGGTGCAGCAGAAGCAAATACATGGAACCCATGGCTGACTAACACACAGCAGTTTCTGTATTATCTTCCTAACGGACAAATTTTCTCCGTGCATTCTGCTCTCCCATGCTTCACCTACCATAATGAGGGTGTTACTTGCACCCAG TTTT  CAAACCCACAGGTGGTAGCCTCAGATCAGCAGCATCAACACCAAACTTCTGAAGCTGTAGATTACAAGGGTATACAGAGGGAAGGATCTTGGACGGAGTCAAATACATCCTCAAGCAGTGTGCCTGAAACAGCAACTCATAATTCAGAGACTACAGAATCATATAGAAACGGAAACAGAAACGAAGATGAAATGGTACCTTCTCCAGATTCAAGAAAATGTGTGAGCCCAGGTTCCAACTGCAGGCGAGGCTTTGTGCCGTACAAGAGATGTGTTGCTGATAGTGAGGCGCTGCTGAAGTCACAGGCGCCTCAGGAGGAGGCAGACGGAGAGATGACGAGGCTGTGCTTATAAATTTTTGGAGCCTCGTAGATCACTGCAACTATAGATGCTTGCTACTAATATTTTGTTCACAGATGAGTAGGAACTGATGTACTGCAGGAGGGGCTGCTTTCCTGTTACAAGAGGCAGATTGAAACCGCGTTAGTACTCCACAAAACAGGGAGTGG CCGTGGTTCTTGTCTGGCCATGTACAGTTCAAATATTCTATGTTTCCATTTTCCTCGTCGTGTGTTTGTAATTTCGCTCCCATTGCGGGAGCGTTCAGAGGTCAATGGCTGTCATGCAATGACAAGTATTTTGATAGAGTTGTAGAAGGGTTGTACTGATGTAAATTATACAGTAACTTATTATCTGTAAGACAATAACAGGCGAGCTAAAGAAAACAACGTTGGAA               ]
[+] EMBL CF314503             [ TTCCTGCCTTGCCTCCTCGTCTCCTTCTCTGCTGCTCTCCAAGCTCTTCCTGCTTCCATCAGGTTGTCTCGAGAAAGATTGGAGTTTTTGGTGGTTTGGGTTGTGCGGTTCTTGCTTTTGTTGGCGCAAGCGCATGGCTGGTTCTGGGACATAGTGAGCTGAGATAGAGTTCTTGTGTTCGGTGGAGTTTGGCTTTGGTGAATCTTCGATTCAAGTCTGGAGATGGCGCGTTTTCAGGAAACCAAGGCGAGGAATGATCAAGGACCTGTTGCTGATCATGTTGGGCACCAAAACCTCATGGAAAACCTCACAGATCCTCTGGATTCCAGTGGCATGGACATGATGGACGAAGCGCGAATTCCTAAGGCGCGGAAGCCATACACGATAACGAAGCAAAGGGAGAAATGGACCGANGACGAACATAAGCTGTTCTTGGAAGCCCTGCAGCTCCATGGCCGAGCCTGGCGACGCATCCAAGAGCACATAGGCACCAAGACTGCCGTGCAGATCAGGAGCCACGCACAGAAGTTCTTCTCCAAGGTCATCAAAGAATCATCTGGGGACAATTGC ACAGCTTGGGGTGCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CA753218             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              gGCAACTGCTGAGTTAGCTATGGAGTTGCCTCCTACAAATGACGAGGATGTCAAGGGCAATGGCGATCATGAAGAAGTTACATGTGACAGATCAGGAGTTCCAGTCCTTAGGCTATTTGGCAAGAGGGTTATGGTGAATGATTTACATCAGATGTCAGCCCCTGATGCCGGGAACCTGCAAACTGTGGCAGACATGGAAGTGGACGCTTCAGTTGAGACACCAACTAGTGGAACTGGGAAATTCTCTTCCCATGGTGCAGCAGAAGCAAATACATGGAACCCATGGCTGACTAACACACAGCAGTTTCTGTATTATCTTCCTAACGGACAAATTTTCTCCGTGCATTCTGCTCTCCCATGCTTCACCTACCATAATGAGGGTGTTACTTGCACCCAGNTTTTNNCAAACCCCCAccaagg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CA764355             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AAGGGTATACAGAGGGAAGGATCTTGGACGGAGTCAAATACATCCTCAAGCAGTGTGCCTGAAACAGCAACTCATAATTCAGAGACTACAGAATCATATAGAAACGGAAACAGAAACGAAGATGAAATGGTACCTTCTCCAGATTCAAGAAAATGTGTGAGCCCAGGTTCCAACTGCAGGCGAGGCTTTGTGCCGTACAAGAGATGTGTTGTTGATAGTGAGGCGCTGCTGAAGTCACAGGCGCCTCAGGAGGAGGCAGACGGAGAGATGACGAGGCTGTGCTTATAAATTTTTGGAGCCTCGTAGATCACTGCAACTATAGATGCTTGCTACTAATATTTTGTTCACAGATGAGTAGGAACTGATGTACTGCAGGAGGGGCTGCTTTCCTGTTACAAGAGGCAGATTGAAACAGCGCTAGTACTCCACAAAACAGGGAGTGGCCCGTGGTTCTTGTCTGGCCATGTACAGTTCAAATATTCTATGTTTCCATTTTCCTCGTCGTGTGTTTGTAATTTCGCTCCCATTGCGGGAGCGTTCAGA                                                                                                                                               ]
[+] EMBL AU174527             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GAAACAGAAACGAAGATGAAATGGTACCTTCTCCAGATTCAAGAAAATGTGTGAGCCCAGGTTCCAACTGCAGGCGAGGCTTTGTGCCGTACAAGAGATGTGTTGCTGATAGTGAGGCGCTGCTGAAGTCACAGGCGCCTCAGGAGGAGGCAGACGGAGAGATGACGAGGCTGTGCTTATAAATTTTTGGAGCCTCGTAGATCACTGCAACTATAGATGCTTGCTACTAATATTTTGTTCACAGATGAGTAGGAACTGATGTACTGCAGGAGGGGCTGCTTTCCTGTTACAAGAGGCAGATTGAAACCGCGTTAGTACTCCACAAAACAGGGAGTGG CCGTGGTTCTTGTCTGGCCATGTACAGTTCAAATATTCTATGTTTCCATTTTCCTCGTCGTGTGTTTGTAATTTCGCTCCCATTGCG                                                                                                                                                           ]
[+] EMBL AU174528             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CGCCTCAGGAGGAGGCAGACGGAGAGATGACGAGGCTGTGCTTATAAATTTTTGGAGCCTCGTAGATCACTGCAACTATAGATGCTTGCTACTAATATTTTGTTCACAGATGAGTAGGAACTGATGTACTGCAGGAGGGGCTGCTTTCCTGTTACAAGAGGCAGATTGAAACCGCGTTAGTACTCCACAAAACAGGGAGTGG CCGTGGTTCTTGTCTGGCCATGTACAGTTCAAATATTCTATGTTTCCATTTTCCTCGTCGTGTGTTTGTAATTTCGCTCCCATTGCGGGAGCGTTCAGAGGTCAATGGCTGTCATGCAATGACAAGTATTTTGATAGAGTTGTAGAAGGGTTGTACTGATGTAAATTATACAGTAACTTATTATCTGTAAGACAATAACAGGCGAGCTAAAGAAAACAACGTTGGAAAGCTTTGTTCAAAAA]
[+] EMBL AF522022             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ACAAAACAGGGAGTGG CCGTGGTTCTTGTCTGGCCATGTACAGTTCAAATATTCTATGTTTCCATTTTCCTCGTCGTGTGTTTGTAATTTCGCTCCCATTGCGGGAGCGTTCAGAGGTCAATGGCTGTCATGCAATGACAAGTATTTTGATAGAGTTGTAGAAGGGTTGTACTGATGTAAATTATACAGTAACTTATTATCTGTAAGACAATAACAGGCGAGCTAAAGAAAACAACGTTGGAAA              ]




>consensus_9886#0
CTTCCTGCCTTGCCTCCTCGTCTCCTTCTCTGCTGCTCTCCAAGCTCTTCCTGCTTCCAT
CAGGTTGTCTCGAGAAAGATTGGAGTTTTTGGTGGTTTGGGTTGTGCGGTTCTTGCTTTT
GTTGGCGCAAGCGCATGGCTGGTTCTGGGACATAGTGAGCTGAGATAGAGTTCTTGTGTT
CGGTGGAGTTTGGCTTTGGTGAATCTTCGATTCAAGTCTGGAGATGGCGCGTTTTCAGGA
AACCAAGGCGAGGAATGATCAAGGACCTGTTGCTGATCATGTTGGGCACCGAAACCTCAT
GGAAAACCTCACAGATCCTCTGGATTCCAGTGGCATGGACATGATGGACGAAGCGCGAAT
TCCTAAGGCGCGGAAGCCATACACGATAACGAAGCAAAGGGAGAAATGGACCGAGGACGA
ACATAAGCTGTTCTTGGAAGCCCTGCAGCTCCATGGCCGAGCCTGGCGACGCATCCAAGA
GCACATAGGCACCAAGACTGCCGTGCAGATCAGGAGCCACGCACAGAAGTTCTTCTCCAA
GGTCATCAAAGAATCATCTGGGGACAATTGCAACAGCTTGGGTGCTGCATCATCAATTCA
GATTCCCCCGCCGCGGCCGAAGCGTAAGCCTGTTCATCCGTACCCACGCAATCTAGGGAG
CACAGCCAGCAAGAACGTCCCTGCACTGAAACAGCTAGAGAAGCCTCAGCTGCAGGTGCA
GTCTCTCTACGACCAGGACAATGGGTCGCCGACGTCAGTGTTAACAGTACCACAGATACG
GGCTGATACACTGGGAAGTGAGAGTGGTGGGTCGCCAACCTCGACGATTGATATTGAAGA
GAGATGTCCTACACCAAGCATAGCAACTGCTGAGTTAGCTATGGAGTTGCCTCCTACAAA
TGACGAGGAGGTCAAGGGCAATGGCGATCATGAAGAAGTTACATGTGACAGATCAGGAGT
TCCAGTCCTTAGGCTATTTGGCAAGAGGGTTATGGTGAATGATTTACATCAGATGTCAGC
CCCTGATGCCGGGAACCTGCAAACTGTGGCAGACATGGAAGTGGACGCTTCAGCTGAGAC
ACCAACTAGTGGAACTGGGAAATTCTCTTCCCATGGTGCAGCAGAAGCAAATACATGGAA
CCCATGGCTGACTAACACACAGCAGTTTCTGTATTATCTTCCTAACGGACAAATTTTCTC
CGTGCATTCTGCTCTCCCATGCTTCACCTACCATAATGAGGGTGTTACTTGCACCCAGTT
TTCAAACCCACAGGTGGTAGCCTCAGATCAGCAGCATCAACACCAAACTTCTGAAGCTGT
AGATTACAAGGGTATACAGAGGGAAGGATCTTGGACGGAGTCAAATACATCCTCAAGCAG
TGTGCCTGAAACAGCAACTCATAATTCAGAGACTACAGAATCATATAGAAACGGAAACAG
AAACGAAGATGAAATGGTACCTTCTCCAGATTCAAGAAAATGTGTGAGCCCAGGTTCCAA
CTGCAGGCGAGGCTTTGTGCCGTACAAGAGATGTGTTGCTGATAGTGAGGCGCTGCTGAA
GTCACAGGCGCCTCAGGAGGAGGCAGACGGAGAGATGACGAGGCTGTGCTTATAAATTTT
TGGAGCCTCGTAGATCACTGCAACTATAGATGCTTGCTACTAATATTTTGTTCACAGATG
AGTAGGAACTGATGTACTGCAGGAGGGGCTGCTTTCCTGTTACAAGAGGCAGATTGAAAC
CGCGTTAGTACTCCACAAAACAGGGAGTGGCCGTGGTTCTTGTCTGGCCATGTACAGTTC
AAATATTCTATGTTTCCATTTTCCTCGTCGTGTGTTTGTAATTTCGCTCCCATTGCGGGA
GCGTTCAGAGGTCAATGGCTGTCATGCAATGACAAGTATTTTGATAGAGTTGTAGAAGGG
TTGTACTGATGTAAATTATACAGTAACTTATTATCTGTAAGACAATAACAGGCGAGCTAA
AGAAAACAACGTTGGAAAGCTTTGTTCAAAAA
clustalw multiple alignements is not computed in this case