These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9889#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 633 fasta sequence [GCTCGGCAGCCCGGTATTCGGGCGCGGCGCGCACGGCCAGCATGGTATTCACGAGGCGGGTCGAGGCCTCCATCTCCTCGGCC-CATCGTCGCGCAGCGCCAGCCCGACCCACGCCGCCGCGCTTGCCAGCAGGGCCAGGGCAAAGCCAAGCACATATCCGAACAGTCTCCAGCGCAAATCCACGTTGCGTCTCCTTGTATTCCCTTGGGGGTAGCGCAGCAAGGCATGTGCCAGCTCCCGGAAGTCCCGGGAAAACTTCCCGCCCCCGGGGGGAGCCCTTCCCACGACAGGGCCACCGCGGCCCTCCCATACTGCCCCTCGTTCCCGCCCCCGGCCATCAACCCCGGAGCGGGAAGCGACGACAGACAACATTCCGGAGACAAGGACCCACCATGAAACAAGGACGCACCCACCTCAAGCC-GGC-GCTGCTGGCCTTTGCCCTCGCCGCCGCCTTTGCGGCCCCCGCCCAGGCCGCCGGAACCAAGGTCAGCTGGGACGACATCCGGAACGACGACAAGACCCCGGGCGACGTGCTGACCTACGGCCTCGGCCTCAAGGCCCAGCGCCACAGCCCCCTCAAGACGGTGAACGCCAGGAACGTGGCCGGCCTGGTGCCCGCCTGGAGCTTCTCCT] [+] EMBL CF339599 [GCTCGGCAGCCCGGTATTCGGGCGCGGCGCGCACGGCCAGCATGGTATTCACGAGGCGGGTCGAGGCCTCCATCTCCTCGGCC CATCGTCGCGCAGCGCCAGCCCGACCCACGCCGCCGCGCTTGCCAGCAGGGCCAGGGCAAAGCCAAGCACATATCCGAACAGTCTCCAGCGCAAATCCACGTTGCGTCTCCTTGTATTCCCTTGGGGGTAGCGCAGCAAGGCATGTGCCAGCTCCCGGAAGTCCCGGGAAAACTTCCCGCCCCCGGGGGGAGCCCTTCCCACGACAGGGCCACCGCGGCCCTCCCATACTGCCCCTCGTTCCCGCCCCCGGCCATCAACCCCGGAGCGGGAAGCGACGACAGACAACATTCCGGAGACAAGGACCCACCATGAAACAAGGACGCACCCACCTCAAGCCNGGC GCTGCTGGCCTTTGCCCTCGCCGCCGCCTTTGCGGCCCCCGCCCAGGCCGCCGGAACCAAGGTCAGCTGGGACGACATCCGGAACGACGACAAGACCCCGGGCGACGTGCTGACCTACGGCCTCGGCCTCAAGGCCCAGCGCCACAGCCCCCTCAAGACGG ] [+] EMBL CF340395 [GCTCGGCAGCCCGGTATTCGGGCGCGGCGCGCACGGCCAGCATGGTATTCACGAGGCGGGTCGAGGCCTCCATCTCCTCGGCCACATCGTCGCGCAGCGCCAGCCCGACCCACGCCGCCGCGCTTGCCAGCAGGGCCAGGGCAAAGCCAAGCACATATCCGAACAGTCTCCAGCGCAAATCCACGTTGCGTCTCCTTGTATTCCCTTGGGGGTAGCGCAGCAAGGCATGTGCCAGCTCCCGGAAGTCCCGGGAAAACTTCCCGCCCCCGGGGGGAGCCCTTCCCACGACAGGGCCACCGCGGCCCTCCCATACTGCCCCTCGTTCCCGCCCCCGGCCATCAACCCCGGAGCGGGAAGCGACGACAGACAACATTCCGGAGACAAGGACCCACCATGAAACAAGGACGCACCCACCTCAAGCC GGCNGCTGCTGGCCTTTGCCCTCGCCGCCGCCTNTGCGGCCCCCGCCCAGGCCGCCGGAACCAAGGTCAGCTGGGACGACATCCGGAACGACGACAAGACCCCGGGCGACGTGCTGACCTACGGCCTCGGCCTCAAGGCCCAGCGCCACAGCCCCCTCAAGACGG ] [+] EMBL CF338443 [ TCGGCAGCCCGGTATTCGGGCGCGGCGCGCACGGCCAGCATGGTATTCACGAGGCGGGTCGAGGCCTCCATCTCCTCGGCCACATCGTCGCGCAGCGCCAGCCCGACCCACGCCGCCGCGCTTGCCAGCAGGGCCAGGGCAAAGCCAAGCACATATCCGAACAGTCTCCAGCGCAAATCCACGTTGCGTCTCCTTGTATTCCCTTGGGGGTAGCGCAGCAAGGCATGTGCCAGCTCCCGGAAGTCCCGGGAAAACTTCCCGCCCCCGGGGGGAGCCCTTCCCACGACAGGGCCACCGCGGCCCTCCCATACTGCCCCTCGTTCCCGCCCCCGGCCATCAACCCCGGAGCGGGAAGCGACGACAGACAACATTCCGGAGACAAGGACCCACCATGAAACAAGGACGCACCCACCTCAAGCC GGC GCTGCTGGCCTTTGCCCTCGCCGCCGCCTTTGCGGCCCCCGCCCAGGCCGCCGGAACCAAGGTCAGCTGGGACGACATCCGGAACGACGACAAGACCCCGGGCGACGTGCTGACCTACGGCCTCGGCCTCAAGGCCCAGCGCCA ] [+] EMBL CF338575 [ GGCAGCCTGGTATTCGGGCGCGGCGCGCACGGCCAGCATGGTATTCACGATGCGGGTCGAGGCCTCCATCTCCTCGGCC CATCGTCGCGCAGCGCCAGCCCGACCCACGCCGCCGCGCTTGCCAGCAGGGCCAGGGCAAAGCCAAGCACATATCCGAACAGTCTCCAGCGCAAATCCACGTTGCGTCTCCTTGTATTCCCTTGGGGGTAGCGCAGCAAGGCATGTGCCAGCTCCCGGAAGTCCCGGGAAAACTTCCCGCCCCCGGGGGGAGCCCTTCCCACGACAGGGCCACCGCGGCCCTCCCATACTGCCCCTCGTTCCCGCCCCCGGCCATCAACCCCGGAGCGGGAAGCGACGACAGACAACATTCCGGAGACAAGGACCCACCATGAAACAAGGACGCACCCACCTCAAGCC GGC GCTGCTGGCCTTTGCCCTCGCCGCCGCCTTTGCGGCCCCCGCCCAGGCCGCCGGAACCAAGGTCAGCTGGGACGACATCCGGAACGACGACAAGACCCCGGGCGACGT ] [+] EMBL CF339194 [ GCGCGGCGCGCACGGCCAGCATGGTATTCACGAGGCGGGTCGAGGCCTCCATCTCCTCGGCC CATCGTCGCGCAGCGCCAGCCCGACCCACGCCGCCGCGCTTGCCAGCAGGGCCAGGGCAAAGCCAAGCACATATCCGAACAGTCTCCAGCGCAAATCCACGTTGCGTCTCCTTGTATTCCCTTGGGGGTAGCGCAGCAAGGCATGTGCCAGCTCCCGGAAGTCCCGGGAAAACTTCCCGCCCCCGGGGGGAGCCCTTCCCACGACAGGGCCACCGCGGCCCTCCCATACTGCCCCTCGTTCCCGCCCCCGGCCATCAACCCCGGAGCGGGAAGCGACGACAGACAACATTCCGGAGACAAGGACCCACCATGAAACAAGGACGCACCCACCTCAAGCC GGC GCTGCTGGCCTTTGCCCTCGCCGCCGCCTTTGCGGCCCCCGCCCAGGCCGTCGGAACCAAGGTCAGCTGGGACGACATCCGGAACGACGACAAGACCCCGGGCGACGT ] [+] EMBL CF340086 [ GCGCGCACGGCCAGCATGGTATTCACGAGGCGGGTCGAGGCCTCCATCTCCTCGGCC CATCGTCGCGCAGCGCCAGCCCGACCCACGCCGCCGCGCTTGCCAGCAGGGCCAGGGCAAAGCCAAGCACATATCCGAACAGTCTCCAGCGCAAATCCACGTTGCGTCTCCTTGTATTCCCTTGGGGGTAGCGCAGCAAGGCATGTGCCAGCTCCCGGAAGTCCCGGGAAAACTTCCCGCCCCCGGGGGGAGCCCTTCCCACGACAGGGCCACCGCGGCCCTCCCATACTGCCCCTCGTTCCCGCCCCCGGCCATCAACCCCGGAGCGGGAAGCGACGACAGACAACATTCCGGAGACAAGGACCCACCATGAAACAAGGACGCACCCACCTCAAGCC GGC GCTGCTGGCCTTTGCCCTCGCCGCCGCCTTTGCGGCCCCCGCCCAGGCCGCCGGAACCAAGGTCAGCTGGGACGACATCCGGAACGACGACAAGACCCCGGGCGACGTGCTGACCTACGGCCTCGGCCTCAAGGCCCAGCGCCACAGCCCCCTCAAGACGGTGAACGCCAGGAACGTGGCCGGCCTGGTGCCCGCCTGGAGCTTCTCCT] [+] EMBL CF339769 [ GCGCGCACGGCACGCATGGTATT ACGAGGCGGGTCGAGGCCTCCATCTCCTCGGCC CATCGTCGCGCAGCGCCAGCCCGACCCACGCCGCCGCGCTTGCCAGCAGGGCCAGGGCAAAGCCAAGCACATATCCGAACAGTCTCCAGCGCAAATCCACGTTGCGTCTCCTTGTATTCCCTTGGGGGTAGCGCAGCAAGGCATGTGCCAGCTCCCGGAAGTCCCGGGAAAACTTCCCGCCCCCGGGGGGAGCCCTTCCCACGACAGGGCCACCGCGGCCCTCCCATACTGCCCCTCGTTCCCGCCCCCGGCCATCAACCCCGGAGCGGGAAGCGACGACAGACAACATTCCGGAGACAAGGACCCACCATGAAACAAGGACGCACCCACCTCAAGCC GGC GCTGCTGGCCTTTGCCCTCGCCGCCGCCTTTGCGGCCCCCGCCCAGGCCGCCGGAACCAAGGTCAGCTGGGACGACATCCGGAACGACGACAAGACCCCGGGCGACGTGCTGACCTACGGCCTCGGCCTCAAGGCCCAGCGCCACAGCCCCCTCAAGACGGTGAACG ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||