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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9913#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1155 fasta sequence
[GACCTCTTGCGGGTGGGCCCCACCTGCCGTGGCCCATGTGGCTGAGAAGCCGGCTGGTGGGCCGGCCCGGCGCGTGGGCCCGTTGGTTTAGTGGCAGTGGTTGGGGGGTAAAAAGGTAAAAGGGTAAATTTGGTGGGAAAAATTACGGAAGTGGCCATGCCGAAGCCCACGCGCGCCGTCGACCACCGGCGGCGGAGGAGCGGGCGAGCTCCGGCGATCGCCGCCGTCGCCGTTGCCGCGGAGGATGATGGCGAGGAGCACCATCTCAATCCGTTCTTGGACGCCGCCCCGTCGTCGTCTTCGTCGAGAGTCCAGTTCAGGAAGGTGGCGTCGCGCGCGGTGTGGCTGGAGGAGGCTGGTGCGGCGGAGGTTGTGGACAGCAAGGGCAAGCTCTGGCTGACCACCGGTGTCAACCGGGACGGCAAGCTGTACTACAATGTCGAGGAGATTGGGTTCTTGGCAGAAAGAGGGGCATTGGTTCTTCTTGATTACGAGGGTGAAACAATTGGAATGGAGGAAATCTACGGAAAGATTGCTGGAGGGAAATATGGGTGCTCCTGGGATGCCTTCCAAGCTTACAAGCACTTGAAGTTGCTCGGCTATATTATTGGACGATATGGCGTTCCCTGGACAGTTAAGCGTAGCCATACTTACAGCGTCACTGATGCCTCCACAAGTGTGGTTGAAACTGATCAGATTCAGAGCTTAAATAGAGTCGGTGGTGCCTCCAATGACATAACTAAATTGCTCAAGGAAATGTGCATAGATGATATGCATCCATCCTTTGAAGTGTATCTACCGAATAGCAAATTTAAGAAGACATCCCCAGGAGACCCTAGTTTCGTCCTATGCCTATTAAGCAACAAACCACCATCAAGGGAAGAACTAGAAACCGTTGAAAACAAGTTTGAGGGCATTCCTCTGAAATTTTGCCATGTTGACAACGGACGGGTCAGCTTCCTCTCCTCCAACAAAGCTGCTCTCCCTAGTTTGCCCTGATGAGATAGCAGCAGGAGAATCTGTTACTGTTAGTTTTTTCTGCTTCTGATCTTGTGACGTACATCACTTGGTATTAGATGCAATTCTGGTGTTCTTGTATAACTTCAGATCAGCATTAACACTGACGGAGGATTTTTCAGAGGAATTATTACCGTG]
[+] EMBL CB643456 [GACCTCTTGCGGGTGGGCCCCACCTGCCGTGGCCCATGTGGCTGAGAAGCCGGCTGGTGGGCCGGCCCGGCGCGTGGGCCCGTTGGTTTAGTGGCAGTGGTTGGGGGGTAAAAAGGTAAAAGGGTAAATTTGGTGGGAAAAATTACGGAAGTGGCCATGCCGAAGCCCACGCGCGCCGTCGACCACCGGCGGCGGAGGAGCGGGCGAGCTCCGGCGATCGCCGCCGTCGCCGTTGCCGCGGAGGATGATGGCGAGGAGCACCATCTCAATCCGTTCTTGGACGCCGCCCCGTCGTCGTCTTCGTCGAGAGTCCAGTTCAGGAAGGTGGCGTCGCGCGCGGTGTGGCTGGAGGAGGCTGGTGCGGCGGAGGTTGTGGACAGCAAGGGCAAGCTCTGGCTGACCACCGGTGTCAACCGGGACGGCAAGCTGTACTACAATGTCGAGGAGATTGGGTTCTTGGCAGAAAGAGGGGCATTGGTTCTTCTTGATTACGAGGGTGAAACAATTGGAATGGAGGAAATCTACGGAAAGATTGCTGGAGGGAAATATGGGTGCTCCTGGGATGCCTTCCAAGCTTACAAGCACTTGAAGTTGCTCGGCTATATTATTGGACGATATGGCGTTCCCTGGACAGTTAAGCGTAGCCATACTTACAGCGTCACTGATGCCTCCACAAGTGTGGTTGAAACTGATCAGATTCAGAGCTTANATAGAGTCGGTGGTGCCTCCAATGACATAACTAAATTGCTCAAGGAAATGTGCATAGATGATATGCAT ]
[+] EMBL CB643415 [GACCTCTTGCGGGTGGGCCCCACCTGCCGTGGCCCATGTGGCTGAGAAGCCGGCTGGTGGGCCGGCCCGGCGCGTGGGCCCGTTGGTTTAGTGGCAGTGGTTGGGGGGTAAAAAGGTAAAAGGGTAAATTTGGTGGGAAAAATTACGGAAGTGGCCATGCCGAAGCCCACGCGCGCCGTCGACCACCGGCGGCGGAGGAGCGGGCGAGCTCCGGCGATCGCCGCCGTCGCCGTTGCCGCGGAGGATGATGGCGAGGAGCACCATCTCAATCCGTTCTTGGACGCCGCCCCGTCGTCGTCTTCGTCGAGAGTCCAGTTCAGGAAGGTGGCGTCGCGCGCGGTGTGGCTGGAGGAGGCTGGTGCGGCGGAGGTTGTGGACAGCAAGGGCAAGCTCTGGCTGACCACCGGTGTCAACCGGGACGGCAAGCTGTACTACAATGTCGAGGAGATTGGGTTCTTGGCAGAAAGAGGGGCATTGGTTCTTCTTGATTACGAGGGTGAAACAATTGGAATGGAGGAAATCTACGGAAAGATTGCTGGAGGGAAATATGGGTGCTCCTGGGATGCCTTCAAAGCTTACAAGCACTTGAAGTTGCTCGGCTATATTATTGGACGATATGGCGTTCCCTGGACAGATAAGCGTAGCCATACTTACAGCGTCTCTG ]
[+] EMBL CB643499 [GACCCCTTGCGGGTGGGCCCCACCTGCCGTGGCCCATGTGGCTGAGAAGCCGGCTGGTGGGCCGGCCCGGCGCGTGGCCCCGTTGGTTTAGTGGCAGTGGTTGGGGGGTAAAAAGGTAAAAGGGTAAATTTGGTGGGAAAAATTACGGAAGTGGCCATGCCGAAGCCCACGCGCGCCGTCGACCACCGGCGGCGGAGGAGCGGGCGAGCTCCGGCGATCGCCGCCGTCGCCGTTGCCGCGGAGGATGATGGCGAGGAGCACCATCTCAATCCGTTCTTGGACGCCGCCCCGTCGTCGTCTTCATCGAGAGTCCAGTTCAGGAAGGTGGCGTCGCGCGCGGTGTGGCTGGAGGAGGCTGGTGCGGCGGAGGTTGTGGACAGCAAGGGCAAGCTCTGGCTGACCACCGGTGTCAACCGGGACGGCAAGCTGTACTACAATGTCGAGGAGATTGGGTTCTTGGCAGAAAGAGGGGCATTGGTTCTTCTTGATTACGAGGGTGAAACAATTGGAATGGAGGAAATCTACGGAAAGATTGCTGGAGGGAAATATGGGTGCTCCTGGGATGCCTTCCAAGCTTACAAGCACTTGAAGTTGCTCGGCTATATTATTGGACGATATGGCGTTCCCTGGACAGTTAAGCGTA ]
[+] EMBL AK073194 [ ACGGAAGTGGCCATGCCGAAGCCCACGCGCGCCGTCGACCACCGGCGGCGGAGGAGCGGGCGAGCTCCGGCGATCGCCGCCGTCGCCGTTGCCGCGGAGGATGATGGCGAGGAGCACCATCTCAATCCGTTCTTGGACGCCGCCCCGTCGTCGTCTTCGTCGAGAGTCCAGTTCAGGAAGGTGGCGTCGCGCGCGGTGTGGCTGGAGGAGGCTGGTGCGGCGGAGGTTGTGGACAGCAAGGGCAAGCTCTGGCTGACCACCGGTGTCAACCGGGACGGCAAGCTGTACTACAATGTCGAGGAGATTGGGTTCTTGGCAGAAAGAGGGGCATTGGTTCTTCTTGATTACGAGGGTGAAACAATTGGAATGGAGGAAATCTACGGAAAGATTGCTGGAGGGAAATATGGGTGCTCCTGGGATGCCTTCCAAGCTTACAAGCACTTGAAGTTGCTCGGCTATATTATTGGACGATATGGCGTTCCCTGGACAGTTAAGCGTAGCCATACTTACAGCGTCACTGATGCCTCCACAAGTGTGGTTGAAACTGATCAGATTCAGAGCTTAAATAGAGTCGGTGGTGCCTCCAATGACATAACTAAATTGCTCAAGGAAATGTGCATAGATGATATGCATCCATCCTTTGAAGTGTATCTACCGAATAGCAAATTTAAGAAGACATCCCCAGGAGACCCTAGTTTCGTCCTATGCCTATTAAGCAACAAACCACCATCAAGGGAAGAACTAGAAACCGTTGAAAACAAGTTTGAGGGCATTCCTCTGAAATTTTGCCATGTTGACAACGGACGGGTCAGCTTCCTCTCCTCCAACAAAGCTGCTCTCCCTAGTTTGCCCTGATGAGATAGCAGCAGGAGAATCTGTTACTGTTAGTTTTTTCTGCTTCTGATCTTGTGACGTACATCACTTGGTATTAGATGCAATTCTGGTGTTCTTGTATAACTTCAGATCAGCATTAACACTTACGGAGGATTTTTCAGAGGAATTATTACCGTG]
[-] EMBL CB643416 [ CAAGCTCTGGCTGACCACCGGTGTCAACCGGGACGGCAAGCTGTACTACAATGTCGAGGAGATTGGGTTCTTGGCAGAAAGAGGGGCATTGGTTCTTCTTGATTACGAGGGTGAAACAATTGGAATGGAGGAAATCTACGGAAAGATTGCTGGAGGGAAATATGGGTGCTCCTGGGATGCCTTCCAAGCTTACAAGCACTTGAAGTTGCTCGGCTATATTATTGGACGATATGGCGTTCCCTGGACAGTTAAGCGTAGCCATACTTACAGCGTCACTGATGCCTCCACAAGTGTGGTTGAAACTGATCAGATTCAGAGCTTAAATAGAGTCGGTGGTGCCTCCAATGACATAACTAAATTGCTCAAGGAAATGTGCATAGATGATATGCATCCATCCTTTGAAGTGTATCTACCGAATAGCAAATTTAAGAAGACATCCCCAGGAGACCCTAGTTTCGTCCTATGCCTATTAAGCAACAAACCACCATCAAGGGAAGAACTAGAAACCGTTGAAAACAAGTTTGAGGGCATTCCTCTGAAATTTTGCCATGTTGACAACGGACGGGTCAGCTTCCTCTCCTCCAACAAAGCTGCTCTCCCTAGTTTGCCCTGATGAGATAGCAGCAGGAGAATCTGTTACTGTTAGTTTTTTCTGCTTCTGATCTTGTGACGTACATCACTTGGTATTAGATGCAATTCTGGTGTTCTTGTATAACTTCAGATCAGCATTAACACTGACGGAGGATTTTTCAGAGGA ]
[-] EMBL CB643500 [ CGGGACGGCAAGCTGTACTACAATGTCGAGGAGATTGGGTTCTTGGCAGAAAGAGGGGCATTGGTTCTTCTTGATTACGAGGGTGAAACAATTGGAATGGAGGAAATCTACGGAAAGATTGCTGGAGGGAAATATGGGTGCTCCTGGGATGCCTTCCAAGCTTACAAGCACTTGAAGTTGCTCGGCTATATTATTGGACGATATGGCGTTCCCTGGACAGTTAAGCGTAGCCATACTTACAGCGTCACTGATGCCTCCACAAGTGTGGTTGAAACTGATCAGATTCAGAGCTTAAATAGAGTCGGTGGTGCCTCCAATGACATAACTAAATTGCTCAAGGAAATGTGCATAGATGATATGCATCCATCCTTTGAAGTGTATCTACCGAATAGCAAATTTAAGAAGACATCCCCAGGAGACCCTAGTTTCGTCCTATGCCTATTAAGCAACAAACCACCATCAAGGGAAGAACTAGAAACCGTTGAAAACAAGTTTGAGGGCATTCCTCTGAAATTTTGCCATGTTGACAACGGACGGGTCAGCTTCCTCTCCTCCAACAAAGCTGCTCTCCCTAGTTTGCCCTGATGAGATAGCAGCAGGAGAATCTGTTACTGTTAGTTTTTTCTGCTTCTGATCTTGTGACGTACATCACTTGGTATTAGATGCAATTCTGGTGTTCTTGTATAACTTCAGATCAGCATTAACACTGACGGAGGATTTTTCAGAGGA ]
[-] EMBL CB643457 [ AGCTGTACTACAATGTCGAGGAGATTGGGTTCTTGGCAGAAAGAGGGGCATTGGTTCTTCTTGATTACGAGGGTGAAACAATTGGAATGGAGGAAATCTACGGAAAGATTGCTGGAGGGAAATATGGGTGCTCCTGGGATGCCTTCCAAGCTTACAAGCACTTGAAGTTGCTCGGCTATATTATTGGACGATATGGCGTTCCCTGGACAGTTAAGCGTAGCCATACTTACAGCGTCACTGATGCCTCCACAAGTGTGGTTGAAACTGATCAGATTCAGAGCTTAAATAGAGTCGGTGGTGCCTCCAATGACATAACTAAATTGCTCAAGGAAATGTGCATAGATGATATGCATCCATCCTTTGAAGTGTATCTCCCGAATAGCAAATTTAAGAAGACATCCCCAGGAGACCCTAGTTTCGTCCTATGCCTATTAAGCAACAAACCACCATCAAGGGAAGAACTAGAAACCGTTGAAAACAAGTTTGAGGGCATTCCTCTGAAATTTTGCCATGTTGACAACGGACGGGTCAGCTTCCTCTCCTCCAACAAAGCTGCTCTCCCTAGTTTGCCCTGATGAGATAGCAGCAGGAGAATCTGTTACTGTTAGTTTTTTCTGCTTCTGATCTTGTGACGTACATCACTTGGTATTAGATGCAATTCTGGTGTTCTTGTATAACTTCAGATCAGCATTCTCAAGGACGGAGGATTTTT ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||