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Oryza sativa
cluster # 9914 cluster # 9914       Sequences # 7       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9914#0 length = 2875 sequences # 5  
 consensus_9914#1 length = 445 sequences # 1  
consensus_9914#2 length = 108 sequences # 1  
consensusID : consensus_9914#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2875
fasta sequence 
                              [TCTCCCCCAAATTCCACCCCCCCCAAAATCCCCTTCTATTCGGCGAACGCGACGGAAACCCTAGCTCTCCGGCCGCCTCCGGCGAGGACTCCGCCTCCGCATCCGCATCCGCATCCGGGCCAGCGACGCCGGCGGAAGTCGACCGCCCGCCCGCGCGCGCTCGCCCCCCCCCCTCCCCGCCATCGCCTCGACTCGGCGCCTTCCTCTACTCCGCCCGCCTCTCGCGTTCCGACTCCGGGCAGGCCTCCTTCGTCGGGACTCGGGACTCACTCGCGCGGGGTTCGTCTTCTTCCTCCTCGGCGGCGAAGGGACACGCCGGCCGCCGATCGACGCGATTCCCCCCGTAGATCGATTCGATCTGTAACTCTCTATCTCTGTGTATTATTTGTGTATTTTGATATCTGAGGGAAAAAGTCTCAGCCTCTCTCGCCGAAAGAAAAAAAAATAATTGTGCAGAAGAGGCGAGAAGGGGAAAAAAAACTTGATATCAACACCATGGGTGTTGTGTATTACAAATATAAGAGTTCAAAGGAAACTATTTCTGTGCCCGTGCCCCATTCTTTTGTCTCTGTTTCTGAACTCAAGCAGCTCATCTTGACGAGCGACAAACATGGCCGTGGCCGCACCCGTGGCCGCGGCCCCAGAGAAGATATTGTCCTCTCCAACGCCCAGACCGGCGAAGAATTTCTAGATGAAAATGCCATGATACCGCAGAACTCGACTGTGTTGGTCCGCCGAACTTCTGGGCAACAATCAGAGAAAATCGTCTTGTTCTCCTCGCGGGAAGTTATAGAAGATGGTGCTATAGCTTCAAACAAGTCAGAGATTACTGAATCAACCTCAAAATCTTGTTCCTCTACAGAAGTACAGGATGAGGATGCTGCAATCGCATCTATAATTGATGCAGCTGAACTCAAATGGGAAGACAAGCCATCTAAAAGAGGACAGACTGGTGGAAGGTTTACGTCAGGACGTTATGGTCATGGACCGGTCGAAGGGGAGACACCTCCACCAGGCTATGTGTGCCGCAGCTGTGGAGTTCCAGGCCATTTCATTCAACATTGCCAACAGGAGAGAAAGACACCTCCATCTGGCTATGTCTGCTACAGATGCCGAATTCCAGGGCATTTTATTCACCATTGCCCGACCATTGGTGATCCCAAATTTGACGATTACAAGAAGCCCCATACTCTTGTGCCAGAAGTATCTGCATGTCCTATTGATGGCATTCCATCAGCTCTTGCCCCAGCTGCATCTGTGAGTGTTGTTGACGACTTGCCAGCTGAGCTCCATTGCCGGCTATGTAATAAAGTGATGGCAGATGCGGTGTTGACAAGCAAGTGCTGCTTCGACAGTTTCTGTGATAAATGCATTCGTGATTACATCATTACACAATCCAAGTGCATTTGTGGAGTCAAGGTTCTTGCAGATGACCTGATTCCCAACCAAACACTTCGGAGCACAATCAGCAATATGCTGGCAACAAGGGCTAGCAGCATCACTAGTGGTACAGGGAAGCACAGGAGCTCTTCAGGCAGCAACGTGGATCCTAATTCAGCAAGCCAAACTCCTTCAGCTGCCTTGGAAAAGCAATCTAAGGATCACCACATATCATCAGCTGCTCCTGATGCTGGCCTCCAAGTTGCTACAGAACATGTTAGCCATCTTGAGCATAAATTGACAACAGGTGTTGATCTCGAAGTGAAAGATGAAGGCAATTCTGCAGGGATATTGGTAGAGAAGATTGTACCAACTGCTGATGCCAGATTAAAAGATGTAACTGACTCCACTTCAAAGCCGGCCACTATTTCAGGAACCATGGAACCCAAAGCTTCCAAGACTGATCAATTGAAGAAGAAGCGCAAGAAGGCAGATTCAACTAAAATTGTTCATCCTAACAATGCTAACTATGGTTACAGCATTCCATTTGACCCTGCGTATTGCAACCCTTACGTCAGTGGGTATCCTTGGTTAACCGATCCTTACATGTACGGCCCAGCGGGCATGCCTTATGGTGGCTATCCGATGGGCCCTTATGGTGTCAATTCCATCGGCAACATGCCACTGCAATTTCCATCAGCAATGCAAGGCAATTTGGCAAATACTCACTGCTGGGAAACTCAATCTATGATTCACTGGGCAAACGAAGACGCTGCACGTCCAAGGCTGGCGGCGAAGCCCAAAGAACCTGAACCTGCCAATCAGTCTCGATCATCAGAGCGTAACCAGCGTCTGAGCTCTTCTCATGGCACCGATCCCAGTTACAAGACCAGCAGGTCAAGC-TCTGA-CAGGAGGGACCATAGGCGCT-CCATTGATT-ACG-TCG-AGGATCA-CCGC-TCTAGT-GATTACGCCGA-GGATCA-CCGCAGCAG-CAAGAG-AATGCGCGCGTC-TTCT-CCATCT--CCAACCGGT-GGTGACAGGCACAGCAGAGCGAGGTCCAGGTACAGTTCCAGGAAGCTTACTTACGAGGATTCATCTCCAACCGGTGGTGACAGGCACAGCAGAGCGAGGTCCAGTCACAGTTCCAGGAGCCTTACTTACGAGGATTCAAGCGATGATGAGCGCAACTTCAAGAGGAGATGGGGAGGCAAAAGATAGATAGGTCACCGTGGACGCAACACAAGGCCGTGATACCTGAATGAATGAAGCTGATGAACATCTTGCATCATTCCATATCAAATGCTTGTTGATGGATGTATGTGTTAATTGTAAGCTGAGGAGAAATCTCCGAAAGCGATTTTCCTCTTAACGGAATTGTAATTATGAGCTACTATTAATGTAAAATGAATGAGAGCAATTCTCATCCCCTCTATGTAATGACAATGTCCTCCAAAGATGAGTGGAACAATCCTTGACCTTTAATAGTCGTTTACTACATTTAAAA]

[+] EMBL AK111718             [TCTCCCCCAAATTCCACCCCCCCCAAAATCCCCTTCTATTCGGCGAACGCGACGGAAACCCTAGCTCTCCGGCCGCCTCCGGCGAGGACTCCGCCTCCGCATCCGCATCCGCATCCGGGCCAGCGACGCCGGCGGAAGTCGACCGCCCGCCCGCGCGCGCTCGCCCCCCCCCCTCCCCGCCATCGCCTCGACTCGGCGCCTTCCTCTACTCCGCCCGCCTCTCGCGTTCCGACTCCGGGCAGGCCTCCTTCGTCGGGACTCGGGACTCACTCGCGCGGGGTTCGTCTTCTTCCTCCTCGGCGGCGAAGGGACACGCCGGCCGCCGATCGACGCGATTCCCCCCGTAGATCGATTCGATCTGTAACTCTCTATCTCTGTGTATTATTTGTGTATTTTGATATCTGAGGGAAAAAGTCTCAGCCTCTCTCGCCGAAAGAAAAAAAAATAATTGTGCAGAAGAGGCGAGAAGGGGAAAAAAAACTTGATATCAACACCATGGGTGTTGTGTATTACAAATATAAGAGTTCAAAGGAAACTATTTCTGTGCCCGTGCCCCATTCTTTTGTCTCTGTTTCTGAACTCAAGCAGCTCATCTTGACGAGCGACAAACATGGCCGTGGCCGCACCCGTGGCCGCGGCCCCAGAGAAGATATTGTCCTCTCCAACGCCCAGACCGGCGAAGAATTTCTAGATGAAAATGCCATGATACCGCAGAACTCGACTGTGTTGGTCCGCCGAACTTCTGGGCAACAATCAGAGAAAATCGTCTTGTTCTCCTCGCGGGAAGTTATAGAAGATGGTGCTATAGCTTCAAACAAGTCAGAGATTACTGAATCAACCTCAAAATCTTGTTCCTCTACAGAAGTACAGGATGAGGATGCTGCAATCGCATCTATAATTGATGCAGCTGAACTCAAATGGGAAGACAAGCCATCTAAAAGAGGACAGACTGGTGGAAGGTTTACGTCAGGACGTTATGGTCATGGACCGGTCGAAGGGGAGACACCTCCACCAGGCTATGTGTGCCGCAGCTGTGGAGTTCCAGGCCATTTCATTCAACATTGCCAACAGGAGAGAAAGACACCTCCATCTGGCTATGTCTGCTACAGATGCCGAATTCCAGGGCATTTTATTCACCATTGCCCGACCATTGGTGATCCCAAATTTGACGATTACAAGAAGCCCCATACTCTTGTGCCAGAAGTATCTGCATGTCCTATTGATGGCATTCCATCAGCTCTTGCCCCAGCTGCATCTGTGAGTGTTGTTGACGACTTGCCAGCTGAGCTCCATTGCCGGCTATGTAATAAAGTGATGGCAGATGCGGTGTTGACAAGCAAGTGCTGCTTCGACAGTTTCTGTGATAAATGCATTCGTGATTACATCATTACACAATCCAAGTGCATTTGTGGAGTCAAGGTTCTTGCAGATGACCTGATTCCCAACCAAACACTTCGGAGCACAATCAGCAATATGCTGGCAACAAGGGCTAGCAGCATCACTAGTGGTACAGGGAAGCACAGGAGCTCTTCAGGCAGCAACGTGGATCCTAATTCAGCAAGCCAAACTCCTTCAGCTGCCTTGGAAAAGCAATCTAAGGATCACCACATATCATCAGCTGCTCCTGATGCTGGCCTCCAAGTTGCTACAGAACATGTTAGCCATCTTGAGCATAAATTGACAACAGGTGTTGATCTCGAAGTGAAAGATGAAGGCAATTCTGCAGGGATATTGGTAGAGAAGATTGTACCAACTGCTGATGCCAGATTAAAAGATGTAACTGACTCCACTTCAAAGCCGGCCACTATTTCAGGAACCATGGAACCCAAAGCTTCCAAGACTGATCAATTGAAGAAGAAGCGCAAGAAGGCAGATTCAACTAAAATTGTTCATCCTAACAATGCTAACTATGGTTACAGCATTCCATTTGACCCTGCGTATTGCAACCCTTACGTCAGTGGGTATCCTTGGTTAACCGATCCTTACATGTACGGCCCAGCGGGCATGCCTTATGGTGGCTATCCGATGGGCCCTTATGGTGTCAATTCCATCGGCAACATGCCACTGCAATTTCCATCAGCAATGCAAGGCAATTTGGCAAATACTCACTGCTGGGAAACTCAATCTATGATTCACTGGGCAAACGAAGACGCTGCACGTCCAAGGCTGGCGGCGAAGCCCAAAGAACCTGAACCTGCCAATCAGTCTCGATCATCAGAGCGTAACCAGCGTCTGAGCTCTTCTCATGGCACCGATCCCAGTTACAAGACCAGCAGGTCAAGC TCTGA CAGGAGGGACCATAGGCGCT CCATTGATT ACG TCG AGGATCA CCGC TCTAGT GATTACGCCGA GGATCA CCGCAGCAG CAAGAG AATGCGCGCGTC TTCT CCATCT  CCAACCGGT GGTGACAGGCACAGCAGAGCGAGGTCCAGGTACAGTTCCAGGAAGCTTACTTACGAGGATTCATCTCCAACCGGTGGTGACAGGCACAGCAGAGCGAGGTCCAGTCACAGTTCCAGGAGCCTTACTTACGAGGATTCAAGCGATGATGAGCGCAACTTCAAGAGGAGATGGGGAGGCAAAAGATAGATAGGTCACCGTGGACGCAACACAAGGCCGTGATACCTGAATGAATGAAGCTGATGAACATCTTGCATCATTCCATATCAAATGCTTGTTGATGGATGTATGTGTTAATTGTAAGCTGAGGAGAAATCTCCGAAAGCGATTTTCCTCTTAACGGAATTGTAATTATGAGCTACTATTAATGTAAAATGAATGAGAGCAATTCTCATCCCCTCTATGTAATGACAATGTCCTCCAAAGATGAGTGGAACAATCCTTGACCTTTAATA                    ]
[+] EMBL CB628109             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TGCTATATCTTCAAACAAGTCAGAGATTACTGAATCAACCTCAAAATCTTGTTCCTCTACAGAAGTACAGGATGAGGATGCTGCAATCGCATCTATAATTGATGCAGCTGAACTCAAATGGGAAGACAAGCCATCTAAAAGAGGACAGACTGGTGGAAGGTTTACGTCAGGACGTTATGGTCATGGACCGGTCGAAGGGGAGACACCTCCACCAGGCTATGTGTGCCGCAGCTGTGGAGTTCCAGGCCATTTCATTCAACATTGCCAACAGGAGAGAAAGACACCTCCATCTGGCTATGTCTGCTACAGATGCCGAATTCCAGGGCATTTTATTCACCATTGCCCGACCATTGGTGATCCCAAATTTGACGATTACAAGAAGCCCCATACTCTTGTGCCAGAAGTATCTGCATGTCCTATTGATGGCATTCCATCAGCTCTTGCCCCAGCTGCATCTGTGAGTGTTGTTGACGACTTGCCAGCTGAGCTCCATTGCCGGCTATGTAATAAAGTGATGGCAGATGCGGTGTTGACAAGCAAGTGCTGCTTCGACAGTTTCTGTGATAAATGCATTCGTGATTACATCATTACACAATCCAAGTGCATTTGTGGAGTCAAGGTTCTTGCAGATGACCTGATTCCCAACCAAACACTTCGGAGCACAATCAGCAATATGCTGGCAACAAGGGCTAGCAGCATCACTAGTGGTACAGGGAAGCACAGGAGCTCTTCAGGCAGCAACGTGGATCCTAATTCAGCAAGCCAAACTCCTTCAGCTGCCTTGGAAAAGCAATCTAAGGATCACCACATATCATCAGCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AK111930             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TGGCAACAAGGGCTAGCAGCATCACTAGTGGTACAGGGAAGCACAGGAGCTCTTCAGGCAGCAACGTGGATCCTAATTCAGCAAGCCAAACTCCTTCAGCTGCCTTGGAAAAGCAATCTAAGGATCACCACATATCATCAGCTGCTCCTGATGCTGGCCTCCAAGTTGCTACAGAACATGTTAGCCATCTTGAGCATAAATTGACAACAGGTGTTGATCTCGAAGTGAAAGATGAAGGCAATTCTGCAGGGATATTGGTAGAGAAGATTGTACCAACTGCTGATGCCAGATTAAAAGATGTAACTGACTCCACTTCAAAGCCGGCCACTATTTCAGGAACCATGGAACCCAAAGCTTCCAAGACTGATCAATTGAAGAAGAAGCGCAAGAAGGCAGATTCAACTAAAATTGTTCATCCTAACAATGCTAACTATGGTTACAGCATTCCATTTGACCCTGCGTATTGCAACCCTTACGTCAGTGGGTATCCTTGGTTAACCGATCCTTACATGTACGGCCCAGCGGGCATGCCTTATGGTGGCTATCCGATGGGCCCTTATGGTGTCAATTCCATCGGCAACATGCCACTGCAATTTCCATCAGCAATGCAAGGCAATTTGGCAAATACTCACTGCTGGGAAACTCAATCTATGATTCACTGGGCAAACGAAGACGCTGCACGTCCAAGGCTGGCGGCGAAGCCCAAAGAACCTGAACCTGCCAATCAGTCTCGATCATCAGAGCGTAACCAGCGTCTGAGCTCTTCTCATGGCACCGATCCCAGTTACAAGACCAGCAGGTCAAGC TCTGA CAGGAGGGACCATAGGCGCT CCATTGATT ACG TCG AGGATCA CCGC TCTAGT GATTACGCCGA GGATCA CCGCAGCAG CAAGAG AATGCGCGCGTC TTCT CCATCT  CCAACCGGT GGTGACAGGCACAGCAGAGCGAGGTCCAGGTACAGTTCCAGGAAGCTTACTTACGAGGATTCATCTCCAACCGGTGGTGACAGGCACAGCAGAGCGAGGTCCAGTCACAGTTCCAGGAGCCTTACTTACGAGGATTCAAGCGATGATGAGCGCAACTTCAAGAGGAGATGGGGAGGCAAAAGATAGATAGGTCACCGTGGACGCAACACAAGGCCGTGATACCTGAATGAATGAAGCTGATGAACATCTTGCATCATTCCATATCAAATGCTTGTTGATGGATGTATGTGTTAATTGTAAGCTGAGGAGAAATCTCCGAAAGCGATTTTCCTCTTAACGGAATTGTAATTATGAGCTACTATTAATGTAAAATGAATGAGAGCAATTCTCATCCCCTCTATGTAATGACAATGTCCTCCAAAGATGAGTGGAACAATCCTTGACCTTTAATAGTCGTTTACTACATTT    ]
[-] EMBL CB628110             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AATCTATGATTCACTGGGCAAACGAAGACGCTGCACGTCCAAGGCTGGCGGCGAAGCCCAAAGAACCTGAACCTGCCAATCAGTCTCGATCATCAGAGCGTAACCAGCGTCTGAGCTCTTCTCATGGCACCGATCCCAGTTACAAGACCAGCAGGTCAAGC TCTGA CAGGAGGGACCATAGGCGCT CCATTGATT ACG TCG AGGATCA CCGC TCTAGT GATTACGCCGA GGATCA CCGCAGCAG CAAGAG AATGCGCGCGTC TTCT CCATCT  CCAACCGGT GGTGACAGGCACAGCAGAGCGAGGTCCAGGTACAGTTCCAGGAAGCTTACTTACGAGGATTCATCTCCAACCGGTGGTGACAGGCACAGCAGAGCGAGGTCCAGTCACAGTTCCAGGAGCCTTACTTACGAGGATTCAAGCGATGATGAGCGCAACTTCAAGAGGAGATGGGGAGGCAAAAGATAGATAGGTCACCGTGGACGCAACACAAGGCCGTGATACCTGAATGAATGAAGCTGATGAACATCTTGCATCATTCCATATCAAATGCTTGTTGATGGATGTATGTGTTAATTGTAAGCTGAGGAGAAATCTCCGAAAGCGATTTTCCTCTTAACGGAATTGTAATTATGAGGTACTATTAATGTAAAATGAATGAGAGCAATTCTCATCCCCTCTATGTAATGACAATGTCCTCCAAAGATGA AGGAACAATCCTTGACCTTTA                       ]
[+] EMBL BI806840             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AGGTCAAGCTTCTGACCAGGAGGGACCATAGGCGCTCCCATTGATTAACGTTCGAAGGATCACCCGCTTCTAGTGGATTAC CCGAGGGATCACCCGCAGCAGCCAAGAGAAATGCGCGCGTCTTTCTCCCATCTCCCCACCCGGTGGGTGACAGGCACAGCAGAGCGAGGTCCAGGTACAGTTCCAGGAAGCTTACTTACGAGGATTCATCTCCAACCGGTGGTGACAGGCACAGCAGAGCGAGGTCCAGTCACAGTTCCAGGAGCCTTACTTACGAGGATTCAAGCGATGATGAGCGCAACTTCAAGAGGAGATGGGGAGGCAAAAGATAGATAGGTCACCGTGGACGCAACACAAGGCCGTGATACCTGAATGAATGAAGCTGATGAACATCTTGCATCATTCCATATCAAATGCTTGTTGATGGATGTATGTGTTAATTGTAAGCTGAGGAGAAATCTCCGAAAGCGATTTTCCTCTTAACGGAATTGTAATTATGAGCTACTATTAATGTAAAATGAATGAGAGC ATTCTCATCCCCTCTATGTAATGAC ATGTCCTCC AAGATGAGTGGAACATCCCTTGACCTTTAATAGTCGTTTACTAAAAAAAAAA]




>consensus_9914#0
TCTCCCCCAAATTCCACCCCCCCCAAAATCCCCTTCTATTCGGCGAACGCGACGGAAACC
CTAGCTCTCCGGCCGCCTCCGGCGAGGACTCCGCCTCCGCATCCGCATCCGCATCCGGGC
CAGCGACGCCGGCGGAAGTCGACCGCCCGCCCGCGCGCGCTCGCCCCCCCCCCTCCCCGC
CATCGCCTCGACTCGGCGCCTTCCTCTACTCCGCCCGCCTCTCGCGTTCCGACTCCGGGC
AGGCCTCCTTCGTCGGGACTCGGGACTCACTCGCGCGGGGTTCGTCTTCTTCCTCCTCGG
CGGCGAAGGGACACGCCGGCCGCCGATCGACGCGATTCCCCCCGTAGATCGATTCGATCT
GTAACTCTCTATCTCTGTGTATTATTTGTGTATTTTGATATCTGAGGGAAAAAGTCTCAG
CCTCTCTCGCCGAAAGAAAAAAAAATAATTGTGCAGAAGAGGCGAGAAGGGGAAAAAAAA
CTTGATATCAACACCATGGGTGTTGTGTATTACAAATATAAGAGTTCAAAGGAAACTATT
TCTGTGCCCGTGCCCCATTCTTTTGTCTCTGTTTCTGAACTCAAGCAGCTCATCTTGACG
AGCGACAAACATGGCCGTGGCCGCACCCGTGGCCGCGGCCCCAGAGAAGATATTGTCCTC
TCCAACGCCCAGACCGGCGAAGAATTTCTAGATGAAAATGCCATGATACCGCAGAACTCG
ACTGTGTTGGTCCGCCGAACTTCTGGGCAACAATCAGAGAAAATCGTCTTGTTCTCCTCG
CGGGAAGTTATAGAAGATGGTGCTATAGCTTCAAACAAGTCAGAGATTACTGAATCAACC
TCAAAATCTTGTTCCTCTACAGAAGTACAGGATGAGGATGCTGCAATCGCATCTATAATT
GATGCAGCTGAACTCAAATGGGAAGACAAGCCATCTAAAAGAGGACAGACTGGTGGAAGG
TTTACGTCAGGACGTTATGGTCATGGACCGGTCGAAGGGGAGACACCTCCACCAGGCTAT
GTGTGCCGCAGCTGTGGAGTTCCAGGCCATTTCATTCAACATTGCCAACAGGAGAGAAAG
ACACCTCCATCTGGCTATGTCTGCTACAGATGCCGAATTCCAGGGCATTTTATTCACCAT
TGCCCGACCATTGGTGATCCCAAATTTGACGATTACAAGAAGCCCCATACTCTTGTGCCA
GAAGTATCTGCATGTCCTATTGATGGCATTCCATCAGCTCTTGCCCCAGCTGCATCTGTG
AGTGTTGTTGACGACTTGCCAGCTGAGCTCCATTGCCGGCTATGTAATAAAGTGATGGCA
GATGCGGTGTTGACAAGCAAGTGCTGCTTCGACAGTTTCTGTGATAAATGCATTCGTGAT
TACATCATTACACAATCCAAGTGCATTTGTGGAGTCAAGGTTCTTGCAGATGACCTGATT
CCCAACCAAACACTTCGGAGCACAATCAGCAATATGCTGGCAACAAGGGCTAGCAGCATC
ACTAGTGGTACAGGGAAGCACAGGAGCTCTTCAGGCAGCAACGTGGATCCTAATTCAGCA
AGCCAAACTCCTTCAGCTGCCTTGGAAAAGCAATCTAAGGATCACCACATATCATCAGCT
GCTCCTGATGCTGGCCTCCAAGTTGCTACAGAACATGTTAGCCATCTTGAGCATAAATTG
ACAACAGGTGTTGATCTCGAAGTGAAAGATGAAGGCAATTCTGCAGGGATATTGGTAGAG
AAGATTGTACCAACTGCTGATGCCAGATTAAAAGATGTAACTGACTCCACTTCAAAGCCG
GCCACTATTTCAGGAACCATGGAACCCAAAGCTTCCAAGACTGATCAATTGAAGAAGAAG
CGCAAGAAGGCAGATTCAACTAAAATTGTTCATCCTAACAATGCTAACTATGGTTACAGC
ATTCCATTTGACCCTGCGTATTGCAACCCTTACGTCAGTGGGTATCCTTGGTTAACCGAT
CCTTACATGTACGGCCCAGCGGGCATGCCTTATGGTGGCTATCCGATGGGCCCTTATGGT
GTCAATTCCATCGGCAACATGCCACTGCAATTTCCATCAGCAATGCAAGGCAATTTGGCA
AATACTCACTGCTGGGAAACTCAATCTATGATTCACTGGGCAAACGAAGACGCTGCACGT
CCAAGGCTGGCGGCGAAGCCCAAAGAACCTGAACCTGCCAATCAGTCTCGATCATCAGAG
CGTAACCAGCGTCTGAGCTCTTCTCATGGCACCGATCCCAGTTACAAGACCAGCAGGTCA
AGCTCTGACAGGAGGGACCATAGGCGCTCCATTGATTACGTCGAGGATCACCGCTCTAGT
GATTACGCCGAGGATCACCGCAGCAGCAAGAGAATGCGCGCGTCTTCTCCATCTCCAACC
GGTGGTGACAGGCACAGCAGAGCGAGGTCCAGGTACAGTTCCAGGAAGCTTACTTACGAG
GATTCATCTCCAACCGGTGGTGACAGGCACAGCAGAGCGAGGTCCAGTCACAGTTCCAGG
AGCCTTACTTACGAGGATTCAAGCGATGATGAGCGCAACTTCAAGAGGAGATGGGGAGGC
AAAAGATAGATAGGTCACCGTGGACGCAACACAAGGCCGTGATACCTGAATGAATGAAGC
TGATGAACATCTTGCATCATTCCATATCAAATGCTTGTTGATGGATGTATGTGTTAATTG
TAAGCTGAGGAGAAATCTCCGAAAGCGATTTTCCTCTTAACGGAATTGTAATTATGAGCT
ACTATTAATGTAAAATGAATGAGAGCAATTCTCATCCCCTCTATGTAATGACAATGTCCT
CCAAAGATGAGTGGAACAATCCTTGACCTTTAATAGTCGTTTACTACATTTAAAA

consensusID : consensus_9914#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 445
fasta sequence 
                              [ACATCAGAGCGAGTCCAGGTACAGTTCCAGTAAGTCTTACTTACGAGGATTCATCTCCAACCGGTGGTGACAGGCACAGCAGAGCGAGGTCCAGTCACAAGTTCAGGACCTTACTTACGAGGATTCAAGCGATGATGAGCGCAACTTCAAGAGGAGATGGGGAGCAAAGATAGATAGGTCACCGTGGACGCAACACAAGGCCGTGATACCTGAATGAATGAAGCTGATGAACATCTTGCATCATTCCATATCAAATGCTTGTTGATGGATGTATGTGTTAATTGTAAGCTGAGGAGAAATCTCCGAAAGCGATTTTCCTCTTAACGGAATTGTAATTATGAGCTACTATTAATGTAAAATGAATGAGAGCATTCTCATCCCCTCTATGTAATGACAATGTCCTCCAAAGATGAGTGGAACATCCCTTGACCTTTTAAAAAAAAAA]

[+] EMBL BI813202             [ACATCAGAGCGAGTCCAGGTACAGTTCCAGTAAGTCTTACTTACGAGGATTCATCTCCAACCGGTGGTGACAGGCACAGCAGAGCGAGGTCCAGTCACAAGTTCAGGACCTTACTTACGAGGATTCAAGCGATGATGAGCGCAACTTCAAGAGGAGATGGGGAGCAAAGATAGATAGGTCACCGTGGACGCAACACAAGGCCGTGATACCTGAATGAATGAAGCTGATGAACATCTTGCATCATTCCATATCAAATGCTTGTTGATGGATGTATGTGTTAATTGTAAGCTGAGGAGAAATCTCCGAAAGCGATTTTCCTCTTAACGGAATTGTAATTATGAGCTACTATTAATGTAAAATGAATGAGAGCATTCTCATCCCCTCTATGTAATGACAATGTCCTCCAAAGATGAGTGGAACATCCCTTGACCTTTTAAAAAAAAAA]




>consensus_9914#1
ACATCAGAGCGAGTCCAGGTACAGTTCCAGTAAGTCTTACTTACGAGGATTCATCTCCAA
CCGGTGGTGACAGGCACAGCAGAGCGAGGTCCAGTCACAAGTTCAGGACCTTACTTACGA
GGATTCAAGCGATGATGAGCGCAACTTCAAGAGGAGATGGGGAGCAAAGATAGATAGGTC
ACCGTGGACGCAACACAAGGCCGTGATACCTGAATGAATGAAGCTGATGAACATCTTGCA
TCATTCCATATCAAATGCTTGTTGATGGATGTATGTGTTAATTGTAAGCTGAGGAGAAAT
CTCCGAAAGCGATTTTCCTCTTAACGGAATTGTAATTATGAGCTACTATTAATGTAAAAT
GAATGAGAGCATTCTCATCCCCTCTATGTAATGACAATGTCCTCCAAAGATGAGTGGAAC
ATCCCTTGACCTTTTAAAAAAAAAA

consensusID : consensus_9914#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 108
fasta sequence 
                              [CAGAGGACGAGACAAGGGNGAAAAAAAACTTGATATCAACACCATGGGTGTTGTGTATTACAAATATAAGAGTTCAAAGGAAACTATTTCTGTGCCAAAAAAAAAAAA]

[+] EMBL CA764458             [CAGAGGACGAGACAAGGGNGAAAAAAAACTTGATATCAACACCATGGGTGTTGTGTATTACAAATATAAGAGTTCAAAGGAAACTATTTCTGTGCCAAAAAAAAAAAA]




>consensus_9914#2
CAGAGGACGAGACAAGGGNGAAAAAAAACTTGATATCAACACCATGGGTGTTGTGTATTA
CAAATATAAGAGTTCAAAGGAAACTATTTCTGTGCCAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9914#0      TCTCCCCCAAATTCCACCCCCCCCAAAATCCCCTTCTATTCGGCGAACGCGACGGAAACC 60
consensus_9914#1      ------------------------------------------------------------
consensus_9914#2      ------------------------------------------------------------
                                                                                  

consensus_9914#0      CTAGCTCTCCGGCCGCCTCCGGCGAGGACTCCGCCTCCGCATCCGCATCCGCATCCGGGC 120
consensus_9914#1      ------------------------------------------------------------
consensus_9914#2      ------------------------------------------------------------
                                                                                  

consensus_9914#0      CAGCGACGCCGGCGGAAGTCGACCGCCCGCCCGCGCGCGCTCGCCCCCCCCCCTCCCCGC 180
consensus_9914#1      ------------------------------------------------------------
consensus_9914#2      ------------------------------------------------------------
                                                                                  

consensus_9914#0      CATCGCCTCGACTCGGCGCCTTCCTCTACTCCGCCCGCCTCTCGCGTTCCGACTCCGGGC 240
consensus_9914#1      ------------------------------------------------------------
consensus_9914#2      ------------------------------------------------------------
                                                                                  

consensus_9914#0      AGGCCTCCTTCGTCGGGACTCGGGACTCACTCGCGCGGGGTTCGTCTTCTTCCTCCTCGG 300
consensus_9914#1      ------------------------------------------------------------
consensus_9914#2      ------------------------------------------------------------
                                                                                  

consensus_9914#0      CGGCGAAGGGACACGCCGGCCGCCGATCGACGCGATTCCCCCCGTAGATCGATTCGATCT 360
consensus_9914#1      ------------------------------------------------------------
consensus_9914#2      ------------------------------------------------------------
                                                                                  

consensus_9914#0      GTAACTCTCTATCTCTGTGTATTATTTGTGTATTTTGATATCTGAGGGAAAAAGTCTCAG 420
consensus_9914#1      ------------------------------------------------------------
consensus_9914#2      ------------------------------------------------------------
                                                                                  

consensus_9914#0      CCTCTCTCGCCGAAAGAAAAAAAAATAATTGTGCAGAAGAGGCGAGAAGGGGAAAAAAAA 480
consensus_9914#1      ------------------------------------------------------------
consensus_9914#2      ------------------------------------------------------------
                                                                                  

consensus_9914#0      CTTGATATCAACACCATGGGTGTTGTGTATTACAAATATAAGAGTTCAAAGGAAACTATT 540
consensus_9914#1      ------------------------------------------------------------
consensus_9914#2      ------------------------------------------------------------
                                                                                  

consensus_9914#0      TCTGTGCCCGTGCCCCATTCTTTTGTCTCTGTTTCTGAACTCAAGCAGCTCATCTTGACG 600
consensus_9914#1      ------------------------------------------------------------
consensus_9914#2      ------------------------------------------------------------
                                                                                  

consensus_9914#0      AGCGACAAACATGGCCGTGGCCGCACCCGTGGCCGCGGCCCCAGAGAAGATATTGTCCTC 660
consensus_9914#1      ------------------------------------------------------------
consensus_9914#2      ------------------------------------------------------------
                                                                                  

consensus_9914#0      TCCAACGCCCAGACCGGCGAAGAATTTCTAGATGAAAATGCCATGATACCGCAGAACTCG 720
consensus_9914#1      ------------------------------------------------------------
consensus_9914#2      ------------------------------------------------------------
                                                                                  

consensus_9914#0      ACTGTGTTGGTCCGCCGAACTTCTGGGCAACAATCAGAGAAAATCGTCTTGTTCTCCTCG 780
consensus_9914#1      ------------------------------------------------------------
consensus_9914#2      ------------------------------------------------------------
                                                                                  

consensus_9914#0      CGGGAAGTTATAGAAGATGGTGCTATAGCTTCAAACAAGTCAGAGATTACTGAATCAACC 840
consensus_9914#1      ------------------------------------------------------------
consensus_9914#2      ------------------------------------------------------------
                                                                                  

consensus_9914#0      TCAAAATCTTGTTCCTCTACAGAAGTACAGGATGAGGATGCTGCAATCGCATCTATAATT 900
consensus_9914#1      ------------------------------------------------------------
consensus_9914#2      ------------------------------------------------------------
                                                                                  

consensus_9914#0      GATGCAGCTGAACTCAAATGGGAAGACAAGCCATCTAAAAGAGGACAGACTGGTGGAAGG 960
consensus_9914#1      ------------------------------------------------------------
consensus_9914#2      ------------------------------------------------------------
                                                                                  

consensus_9914#0      TTTACGTCAGGACGTTATGGTCATGGACCGGTCGAAGGGGAGACACCTCCACCAGGCTAT 1020
consensus_9914#1      ------------------------------------------------------------
consensus_9914#2      ------------------------------------------------------------
                                                                                  

consensus_9914#0      GTGTGCCGCAGCTGTGGAGTTCCAGGCCATTTCATTCAACATTGCCAACAGGAGAGAAAG 1080
consensus_9914#1      ------------------------------------------------------------
consensus_9914#2      ------------------------------------------------------------
                                                                                  

consensus_9914#0      ACACCTCCATCTGGCTATGTCTGCTACAGATGCCGAATTCCAGGGCATTTTATTCACCAT 1140
consensus_9914#1      ------------------------------------------------------------
consensus_9914#2      ------------------------------------------------------------
                                                                                  

consensus_9914#0      TGCCCGACCATTGGTGATCCCAAATTTGACGATTACAAGAAGCCCCATACTCTTGTGCCA 1200
consensus_9914#1      ------------------------------------------------------------
consensus_9914#2      ------------------------------------------------------------
                                                                                  

consensus_9914#0      GAAGTATCTGCATGTCCTATTGATGGCATTCCATCAGCTCTTGCCCCAGCTGCATCTGTG 1260
consensus_9914#1      ------------------------------------------------------------
consensus_9914#2      ------------------------------------------------------------
                                                                                  

consensus_9914#0      AGTGTTGTTGACGACTTGCCAGCTGAGCTCCATTGCCGGCTATGTAATAAAGTGATGGCA 1320
consensus_9914#1      ------------------------------------------------------------
consensus_9914#2      ------------------------------------------------------------
                                                                                  

consensus_9914#0      GATGCGGTGTTGACAAGCAAGTGCTGCTTCGACAGTTTCTGTGATAAATGCATTCGTGAT 1380
consensus_9914#1      ------------------------------------------------------------
consensus_9914#2      ------------------------------------------------------------
                                                                                  

consensus_9914#0      TACATCATTACACAATCCAAGTGCATTTGTGGAGTCAAGGTTCTTGCAGATGACCTGATT 1440
consensus_9914#1      ------------------------------------------------------------
consensus_9914#2      ------------------------------------------------------------
                                                                                  

consensus_9914#0      CCCAACCAAACACTTCGGAGCACAATCAGCAATATGCTGGCAACAAGGGCTAGCAGCATC 1500
consensus_9914#1      ------------------------------------------------------------
consensus_9914#2      ------------------------------------------------------------
                                                                                  

consensus_9914#0      ACTAGTGGTACAGGGAAGCACAGGAGCTCTTCAGGCAGCAACGTGGATCCTAATTCAGCA 1560
consensus_9914#1      ------------------------------------------------------------
consensus_9914#2      ------------------------------------------------------------
                                                                                  

consensus_9914#0      AGCCAAACTCCTTCAGCTGCCTTGGAAAAGCAATCTAAGGATCACCACATATCATCAGCT 1620
consensus_9914#1      ------------------------------------------------------------
consensus_9914#2      ------------------------------------------------------------
                                                                                  

consensus_9914#0      GCTCCTGATGCTGGCCTCCAAGTTGCTACAGAACATGTTAGCCATCTTGAGCATAAATTG 1680
consensus_9914#1      ------------------------------------------------------------
consensus_9914#2      ------------------------------------------------------------
                                                                                  

consensus_9914#0      ACAACAGGTGTTGATCTCGAAGTGAAAGATGAAGGCAATTCTGCAGGGATATTGGTAGAG 1740
consensus_9914#1      ------------------------------------------------------------
consensus_9914#2      ------------------------------------------------------------
                                                                                  

consensus_9914#0      AAGATTGTACCAACTGCTGATGCCAGATTAAAAGATGTAACTGACTCCACTTCAAAGCCG 1800
consensus_9914#1      ------------------------------------------------------------
consensus_9914#2      ------------------------------------------------------------
                                                                                  

consensus_9914#0      GCCACTATTTCAGGAACCATGGAACCCAAAGCTTCCAAGACTGATCAATTGAAGAAGAAG 1860
consensus_9914#1      ------------------------------------------------------------
consensus_9914#2      ------------------------------------------------------------
                                                                                  

consensus_9914#0      CGCAAGAAGGCAGATTCAACTAAAATTGTTCATCCTAACAATGCTAACTATGGTTACAGC 1920
consensus_9914#1      ------------------------------------------------------------
consensus_9914#2      ------------------------------------------------------------
                                                                                  

consensus_9914#0      ATTCCATTTGACCCTGCGTATTGCAACCCTTACGTCAGTGGGTATCCTTGGTTAACCGAT 1980
consensus_9914#1      ------------------------------------------------------------
consensus_9914#2      ------------------------------------------------------------
                                                                                  

consensus_9914#0      CCTTACATGTACGGCCCAGCGGGCATGCCTTATGGTGGCTATCCGATGGGCCCTTATGGT 2040
consensus_9914#1      ------------------------------------------------------------
consensus_9914#2      ------------------------------------------------------------
                                                                                  

consensus_9914#0      GTCAATTCCATCGGCAACATGCCACTGCAATTTCCATCAGCAATGCAAGGCAATTTGGCA 2100
consensus_9914#1      ------------------------------------------------------------
consensus_9914#2      ------------------------------------------------------------
                                                                                  

consensus_9914#0      AATACTCACTGCTGGGAAACTCAATCTATGATTCACTGGGCAAACGAAGACGCTGCACGT 2160
consensus_9914#1      ------------------------------------------------------------
consensus_9914#2      ------------------------------------------------------------
                                                                                  

consensus_9914#0      CCAAGGCTGGCGGCGAAGCCCAAAGAACCTGAACCTGCCAATCAGTCTCGATCATCAGAG 2220
consensus_9914#1      ------------------------------------------------------------
consensus_9914#2      ------------------------------------------------------------
                                                                                  

consensus_9914#0      CGTAACCAGCGTCTGAGCTCTTCTCATGGCACCGATCCCAGTTACAAGACCAGCAGGTCA 2280
consensus_9914#1      ------------------------------------------------------------
consensus_9914#2      ------------------------------------------------------------
                                                                                  

consensus_9914#0      AGCTCTGACAGGAGGGACCATAGGCGCTCCATTGATTACGTCGAGGATCACCGCTCTAGT 2340
consensus_9914#1      ------------------------------------------------------------
consensus_9914#2      ------------------------------------------------------------
                                                                                  

consensus_9914#0      GATTACGCCGAGGATCACCGCAGCAGCAAGAGAATGCGCGCGTCTTCTCCATCTCCAACC 2400
consensus_9914#1      ------------------------------------------------------------
consensus_9914#2      ------------------------------------------------------------
                                                                                  

consensus_9914#0      GGTGGTGACAGGCACAGCAGAGCGAGGTCCAGGTACAGTTCCAGGAAG-CTTACTTACGA 2459
consensus_9914#1      -------------ACATCAGAGCGAG-TCCAGGTACAGTTCCAGTAAGTCTTACTTACGA 46
consensus_9914#2      ------------------------------------------------------------
                                                                                  

consensus_9914#0      GGATTCATCTCCAACCGGTGGTGACAGGCACAGCAGAGCGAGGTCCAGTCACAGTTCCAG 2519
consensus_9914#1      GGATTCATCTCCAACCGGTGGTGACAGGCACAGCAGAGCGAGGTCCAGTCACAAGTTCAG 106
consensus_9914#2      ------------------------------------------------------------
                                                                                  

consensus_9914#0      GAGCCTTACTTACGAGGATTCAAGCGATGATGAGCGCAACTTCAAGAGGAGATGGGGAGG 2579
consensus_9914#1      GA-CCTTACTTACGAGGATTCAAGCGATGATGAGCGCAACTTCAAGAGGAGATGGGGAGC 165
consensus_9914#2      ------------------------------------------------------------
                                                                                  

consensus_9914#0      CAAAAGATAGATAGGTCACCGTGGACGCAACACAAGGCCGTGATACCTGAATGAATGAAG 2639
consensus_9914#1      --AAAGATAGATAGGTCACCGTGGACGCAACACAAGGCCGTGATACCTGAATGAATGAAG 223
consensus_9914#2      ------------------------------------------------------------
                                                                                  

consensus_9914#0      CTGATGAACATCTTGCATCATTCCATATCAAATGCTTGTTGATGGATGTATGTGTTAATT 2699
consensus_9914#1      CTGATGAACATCTTGCATCATTCCATATCAAATGCTTGTTGATGGATGTATGTGTTAATT 283
consensus_9914#2      ------------------------------------------------------------
                                                                                  

consensus_9914#0      GTAAGCTGAGGAGAAATCTCCGAAAGCGATTTTCCTCTTAACGGAATTGTAATTATGAGC 2759
consensus_9914#1      GTAAGCTGAGGAGAAATCTCCGAAAGCGATTTTCCTCTTAACGGAATTGTAATTATGAGC 343
consensus_9914#2      --CAGAGGACGAGACAAGGGNGAAAAAAAACTTGATATCAACACCATGGGTGTTGTG--- 55
                         **  ** **** *     ****   *  **  * * ***   ** *   ** **   

consensus_9914#0      TACTATTAATGTAAAATGAATGAGAGCAATTCTCATCCCCTCTATGTAATGACAATGTCC 2819
consensus_9914#1      TACTATTAATGTAAAATGAATGAGAGCA-TTCTCATCCCCTCTATGTAATGACAATGTCC 402
consensus_9914#2      TATTACAAATATAAGA--GTTCAAAGGAAACTATTTCTGTGCCAAAAAAAAAAAA----- 108
                      ** **  *** *** *    * * ** *       **    * *   **  * **     

consensus_9914#0      TCCAAAGATGAGTGGAACAATCCTTGACCTTTAATAGTCGTTTACTACATTTAAAA 2875
consensus_9914#1      TCCAAAGATGAGTGGAACATCCCTTGACCTTTTAAAAAAAAAA------------- 445
consensus_9914#2      --------------------------------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)