cluster # 9915

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Oryza sativa
cluster # 9915 cluster # 9915 Sequences # 7 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9915#0 length = 619 sequences # 7
consensusID : consensus_9915#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 619
fasta sequence
                              [GGCAAGAGCAACGCAAAGCAAAGAACAGATACTTCTTCTCTCCACCTGCCTCGCAAGCTTCTTCTGTTTCTTGGATCTCACCTCGCCACGCCATTGACGCCATAAGGAGCTTGTGAGAGGTGGTAGCCAAGAAGGAGGAGGAGGAGAT-GGGGTTCGTGCTGGTGATCTCGCTGCCCTTCATCTTCTTCT-CCATCCTGCT-CGGCTTCGGCTGCTACTTCCTCGGCAAGCACAAGGGCCGCGAGGAGATGCGCACCGGCGTCGGCG-CCCAGGTCTACGGCACG-CCGCTGCCGCCGC-CCGGCGTCGGAGCGCCGCCGCCGGAGCCGTTCACGGCG-AAGAAGGACGGCCCCGAGAATCTCGTCTGATCAGCCTCGGCTGCTGCTGCTGCTGAATCGGCTCATTTCTTTTTCTTGCTATACTGT-ACTGTTCGTGCCGCGGTGGTGTACATGAAGTGGTTAATTTGGTTGTTCTTCATGTTGAGTTCAGTGTGATAATTTGTAATCACAATCTATGTGTTTCTTTTTTTCTTTTGGTAAAATGGGTTCGAATCCAAAATTTGTAATCACAAATTCGCAATTAGCGCCCAGACAAGTGATTTGATTGATTGGCTAAAAAAAAAAAA]

[+] EMBL AK107920             [GGCAAGAGCAACGCAAAGCAAAGAACAGATACTTCTTCTCTCCACCTGCCTCGCAAGCTTCTTCTGTTTCTTGGATCTCACCTCGCCACGCCATTGACGCCATAAGGAGCTTGTGAGAGGTGGTAGCCAAGAAGGAGGAGGAGGAGAT GGGGTTCGTGCTGGTGATCTCGCTGCCCTTCATCTTCTTCT CCATCCTGCT CGGCTTCGGCTGCTACTTCCTCGGCAGGCACAAGGGCCGCGAGGAGATGCGCACCGGCGTCGGCG CCCAGGTCTACGGCACG CCGCTGCCGCCGC CCGGCGTCGGAGCGCCGCCGCCGGAGCCGTTCACGGCG AAGAAGGACGGCCCCGAGAATCTCGTCTGATCAGCCTCGGCTGCTGCTGCTGCTGAATCGGCTCATTTCTTTTTCTTGCTATACTGT ACTGTTCGTGCCGCGGTGGTGTACATGAAGTGGTTAATTTGGTTGTTCTTCATGTTGAGTTCAGTGTGATAATTTGTAATCACAATCTATGTGTTTCTTTTTTTCTTTTGGCAAAATGGGTTCGAATCCAAA                                                                    ]
[+] EMBL AU222640             [             CAAAGCAAAAAACAGATACTTCTTCTCTCCACCTGCCTCGCAAGCTTCTTCTGTTTCTTGGATCTCACCTCGCCACGCCATTGACGCCATAAGGAGCTTGTGAGAGGTGGTAGCCAAGAAGGAGGAGGAGGAGAT GGGGTTCGTGCTGGTGATCTCGCTGCCCTTCATCTTCTTCT CCATCCTGCT CGGCTTCGGCTGCTACTTCCTCGGCAAGCACAAGGGCCGCGAGGAGATGCGCACCGGCGTCGGCG CCCAGGTCTACGGCACG CCGCTGCCGCCGC CCGGCGTCGGAGCGCCGCCGCCGGAGCCGTTCACGGCG AAGAAGGACGGCCCCGAGAATCTCGTCTGATCAGCCTCGGCTGCTGCTGCTGCTGAATCGGCTCATTTCTTTTTCTTGCTATACTGT ACTGTTCGTGCCGCGGTGGTGTACATGAAGTGGTTAATTTGGTTGTTCTTCATGTTGAGTTCAGTGTGATAATTTGTAATCACAATCTATGTGTTTCTTTTTTTCTTTTGGTAAAATGGGTTCGAATCCAAAATTTGTAATCAC                                                        ]
[+] EMBL AU095290             [             CAAAGCAAAGAACAGATACTTCTTCTCTCCACCTGCCTCGCAAGCTTCTTCTGTTTCTTGGATCTCACCTCGCCACGCCATTGACGCCATAAGGAGCTTGTGAGAGGTGGTAGCCAAGAAGGAGGAGGAGGAGAT GGGGTTCGTGCTGGTGATCTCGCTGCCCTTCATCTTCTTCT CCATCCTGCT CGGCTTCGGCTGCTACTTCCTCGGCAAGCACAAGGGCCGCGANGAGATGCGCACCGGCGTCGGCG CCCAGGTCTACGGCACG CCGCTGCCGCCGC CCGGCGTCGGAGCGCCGCCGCCGGAGCCGTTCACGGCGAAAGAAGGACGGCCCCGAGAATCTCGTCTGATCAGCCTCGGCTGCTGCTGCTGCTGAATCGGCTCATTTCTTTTTCTTGCTATACTGTAATTGTTCGTGCCGCGGTGGTGTACATTAANTGGTAATTTTGGT                                                                                                                                                             ]
[+] EMBL OSS13014A            [                    AAGAACAGATACTTCTNCTCTCCACCTGCCTCGCAAGCTTCTNCTGTTTCTTGGATCTNACCTCGCCACGCCATTGACGCCATAAGGAGCTTGTNAGAGGTGGTAGCCAAGAAGGAGGAGGAGGAGATGGGGGTTCGTGCTGGTGATCTCGCTGCCCTTCATCTTCTTCT CCATCCNGCT CGGCTTCGGCTGCTACTTCCTCGGCAAGCACAAGGGCCGCNAGGAGATGCGCACCGGCGTCGGCG CCCAGGTCTACGGCACG CNGCTGCCGNCGC CCGG GTCGGAGCGCCGNCGCCGGAGCCGTTCACGGNG AAGAAGGACGGCCCCGAGAATCTC                                                                                                                                                                                                                                                                        ]
[+] EMBL AU031185             [                                                                                                                                 AGAAGGAGGAGGAGGAGAT GGGGTTCGTGCTGGTGATCTCGCTGCCCTTCATCTTCTTCTCCCATCCTGCTCCGGCTTCGGCTGCTACTTCCTCGGCAAGCACAAGGGCCGCGAGGAGATGCGCACCGGCGTCGGCGCCCCAGGTCTACGGCACGCCCGCTGCCGCCGCNCCGGCGTCGGAGCGCCGCCGCCGGAGCCGTTCACGGCG AAGAAGGACGGCCCCGAGAATCTCGTCTGATCAGCCTCGGCTGCTGCTGCTGCTGAATCGGCTCATTTCTTTTTCTTGCTATACTGT ACTGTTCGTGCCGCGGTGGTGTACATGAAGTGGTTAATTTGGTTGTTCTTCATGTTGAGTTCAGTGTGATAATTTGTAATCACAATCTATGTGTTTCTTTTTTTCTTTTGGTAAAATGGGTTCGAATCCAAAATTTGTAATCACAAATTCGCNATTAGCGCCCAGACAAGTGATTTGATTGATTGGCTAAAAAAAAA   ]
[+] EMBL AU031201             [                                                                                                                                                                                                                                        CAAGGGCCNCGAGGAGATGCGCACCGGCGTCGGCN CCCAGGTCTACGGCACGCCCGCTGCCGCCGCACCGGCGTCGGAGCGCCGCCGCCGGAGCCGTTCACGGCG AAGAAGGACGGCCCCGAGAATCTCGTCTGATCAGCCTCGGCTGCTGCTGCTGCTGAATCGGCTCATTTCTTTTTCTTGCTATACTGT ACTGTTCGTGCCGCGGTGGTGTACATGAAGTGGTTAATTTGGTTGTTCTTCATGTTGAGTTCAGTGTGATAATTTGTAATCACAATCTATGTGTTTCTTTTTTTCTTTTGGTAAAATGGGTTCGAATCCAAAATTTGTAATCACAAATTCGCAATTAGCGCCCAGACAAGTGATTTGATTGATTGGCTAAAAAAAAA   ]
[+] EMBL AU162907             [                                                                                                                                                                                                                                                                                                                   CGGAGCGCCGCCGCCGGAGCCGTTCACGGCG AAGAAGGACGGCCCCGAGAATCTCGTCTGATCAGCCTCGGCTGCTGCTGCTGCTGAATCGGCTCATTTCTTTTTCTTGCTATACTGT ACTGTTCGTGCCGCGGTGGTGTACATGAAGTGGTTAATTTGGTTGTTCTTCATGTTGAGTTCAGTGTGATAATTTGTAATCACAATCTATGTGTTTCTTTTTTTCTTTTGGTAAAATGGGTTCGAATCCAAAATTTGTAATCACAAATTCGCAATTAGCGCCCAGACAAGTGATTTGATTGATTGGCTAAAAAAAAAAAA]




>consensus_9915#0
GGCAAGAGCAACGCAAAGCAAAGAACAGATACTTCTTCTCTCCACCTGCCTCGCAAGCTT
CTTCTGTTTCTTGGATCTCACCTCGCCACGCCATTGACGCCATAAGGAGCTTGTGAGAGG
TGGTAGCCAAGAAGGAGGAGGAGGAGATGGGGTTCGTGCTGGTGATCTCGCTGCCCTTCA
TCTTCTTCTCCATCCTGCTCGGCTTCGGCTGCTACTTCCTCGGCAAGCACAAGGGCCGCG
AGGAGATGCGCACCGGCGTCGGCGCCCAGGTCTACGGCACGCCGCTGCCGCCGCCCGGCG
TCGGAGCGCCGCCGCCGGAGCCGTTCACGGCGAAGAAGGACGGCCCCGAGAATCTCGTCT
GATCAGCCTCGGCTGCTGCTGCTGCTGAATCGGCTCATTTCTTTTTCTTGCTATACTGTA
CTGTTCGTGCCGCGGTGGTGTACATGAAGTGGTTAATTTGGTTGTTCTTCATGTTGAGTT
CAGTGTGATAATTTGTAATCACAATCTATGTGTTTCTTTTTTTCTTTTGGTAAAATGGGT
TCGAATCCAAAATTTGTAATCACAAATTCGCAATTAGCGCCCAGACAAGTGATTTGATTG
ATTGGCTAAAAAAAAAAAA
clustalw multiple alignements is not computed in this case