These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9915#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 619 fasta sequence [GGCAAGAGCAACGCAAAGCAAAGAACAGATACTTCTTCTCTCCACCTGCCTCGCAAGCTTCTTCTGTTTCTTGGATCTCACCTCGCCACGCCATTGACGCCATAAGGAGCTTGTGAGAGGTGGTAGCCAAGAAGGAGGAGGAGGAGAT-GGGGTTCGTGCTGGTGATCTCGCTGCCCTTCATCTTCTTCT-CCATCCTGCT-CGGCTTCGGCTGCTACTTCCTCGGCAAGCACAAGGGCCGCGAGGAGATGCGCACCGGCGTCGGCG-CCCAGGTCTACGGCACG-CCGCTGCCGCCGC-CCGGCGTCGGAGCGCCGCCGCCGGAGCCGTTCACGGCG-AAGAAGGACGGCCCCGAGAATCTCGTCTGATCAGCCTCGGCTGCTGCTGCTGCTGAATCGGCTCATTTCTTTTTCTTGCTATACTGT-ACTGTTCGTGCCGCGGTGGTGTACATGAAGTGGTTAATTTGGTTGTTCTTCATGTTGAGTTCAGTGTGATAATTTGTAATCACAATCTATGTGTTTCTTTTTTTCTTTTGGTAAAATGGGTTCGAATCCAAAATTTGTAATCACAAATTCGCAATTAGCGCCCAGACAAGTGATTTGATTGATTGGCTAAAAAAAAAAAA] [+] EMBL AK107920 [GGCAAGAGCAACGCAAAGCAAAGAACAGATACTTCTTCTCTCCACCTGCCTCGCAAGCTTCTTCTGTTTCTTGGATCTCACCTCGCCACGCCATTGACGCCATAAGGAGCTTGTGAGAGGTGGTAGCCAAGAAGGAGGAGGAGGAGAT GGGGTTCGTGCTGGTGATCTCGCTGCCCTTCATCTTCTTCT CCATCCTGCT CGGCTTCGGCTGCTACTTCCTCGGCAGGCACAAGGGCCGCGAGGAGATGCGCACCGGCGTCGGCG CCCAGGTCTACGGCACG CCGCTGCCGCCGC CCGGCGTCGGAGCGCCGCCGCCGGAGCCGTTCACGGCG AAGAAGGACGGCCCCGAGAATCTCGTCTGATCAGCCTCGGCTGCTGCTGCTGCTGAATCGGCTCATTTCTTTTTCTTGCTATACTGT ACTGTTCGTGCCGCGGTGGTGTACATGAAGTGGTTAATTTGGTTGTTCTTCATGTTGAGTTCAGTGTGATAATTTGTAATCACAATCTATGTGTTTCTTTTTTTCTTTTGGCAAAATGGGTTCGAATCCAAA ] [+] EMBL AU222640 [ CAAAGCAAAAAACAGATACTTCTTCTCTCCACCTGCCTCGCAAGCTTCTTCTGTTTCTTGGATCTCACCTCGCCACGCCATTGACGCCATAAGGAGCTTGTGAGAGGTGGTAGCCAAGAAGGAGGAGGAGGAGAT GGGGTTCGTGCTGGTGATCTCGCTGCCCTTCATCTTCTTCT CCATCCTGCT CGGCTTCGGCTGCTACTTCCTCGGCAAGCACAAGGGCCGCGAGGAGATGCGCACCGGCGTCGGCG CCCAGGTCTACGGCACG CCGCTGCCGCCGC CCGGCGTCGGAGCGCCGCCGCCGGAGCCGTTCACGGCG AAGAAGGACGGCCCCGAGAATCTCGTCTGATCAGCCTCGGCTGCTGCTGCTGCTGAATCGGCTCATTTCTTTTTCTTGCTATACTGT ACTGTTCGTGCCGCGGTGGTGTACATGAAGTGGTTAATTTGGTTGTTCTTCATGTTGAGTTCAGTGTGATAATTTGTAATCACAATCTATGTGTTTCTTTTTTTCTTTTGGTAAAATGGGTTCGAATCCAAAATTTGTAATCAC ] [+] EMBL AU095290 [ CAAAGCAAAGAACAGATACTTCTTCTCTCCACCTGCCTCGCAAGCTTCTTCTGTTTCTTGGATCTCACCTCGCCACGCCATTGACGCCATAAGGAGCTTGTGAGAGGTGGTAGCCAAGAAGGAGGAGGAGGAGAT GGGGTTCGTGCTGGTGATCTCGCTGCCCTTCATCTTCTTCT CCATCCTGCT CGGCTTCGGCTGCTACTTCCTCGGCAAGCACAAGGGCCGCGANGAGATGCGCACCGGCGTCGGCG CCCAGGTCTACGGCACG CCGCTGCCGCCGC CCGGCGTCGGAGCGCCGCCGCCGGAGCCGTTCACGGCGAAAGAAGGACGGCCCCGAGAATCTCGTCTGATCAGCCTCGGCTGCTGCTGCTGCTGAATCGGCTCATTTCTTTTTCTTGCTATACTGTAATTGTTCGTGCCGCGGTGGTGTACATTAANTGGTAATTTTGGT ] [+] EMBL OSS13014A [ AAGAACAGATACTTCTNCTCTCCACCTGCCTCGCAAGCTTCTNCTGTTTCTTGGATCTNACCTCGCCACGCCATTGACGCCATAAGGAGCTTGTNAGAGGTGGTAGCCAAGAAGGAGGAGGAGGAGATGGGGGTTCGTGCTGGTGATCTCGCTGCCCTTCATCTTCTTCT CCATCCNGCT CGGCTTCGGCTGCTACTTCCTCGGCAAGCACAAGGGCCGCNAGGAGATGCGCACCGGCGTCGGCG CCCAGGTCTACGGCACG CNGCTGCCGNCGC CCGG GTCGGAGCGCCGNCGCCGGAGCCGTTCACGGNG AAGAAGGACGGCCCCGAGAATCTC ] [+] EMBL AU031185 [ AGAAGGAGGAGGAGGAGAT GGGGTTCGTGCTGGTGATCTCGCTGCCCTTCATCTTCTTCTCCCATCCTGCTCCGGCTTCGGCTGCTACTTCCTCGGCAAGCACAAGGGCCGCGAGGAGATGCGCACCGGCGTCGGCGCCCCAGGTCTACGGCACGCCCGCTGCCGCCGCNCCGGCGTCGGAGCGCCGCCGCCGGAGCCGTTCACGGCG AAGAAGGACGGCCCCGAGAATCTCGTCTGATCAGCCTCGGCTGCTGCTGCTGCTGAATCGGCTCATTTCTTTTTCTTGCTATACTGT ACTGTTCGTGCCGCGGTGGTGTACATGAAGTGGTTAATTTGGTTGTTCTTCATGTTGAGTTCAGTGTGATAATTTGTAATCACAATCTATGTGTTTCTTTTTTTCTTTTGGTAAAATGGGTTCGAATCCAAAATTTGTAATCACAAATTCGCNATTAGCGCCCAGACAAGTGATTTGATTGATTGGCTAAAAAAAAA ] [+] EMBL AU031201 [ CAAGGGCCNCGAGGAGATGCGCACCGGCGTCGGCN CCCAGGTCTACGGCACGCCCGCTGCCGCCGCACCGGCGTCGGAGCGCCGCCGCCGGAGCCGTTCACGGCG AAGAAGGACGGCCCCGAGAATCTCGTCTGATCAGCCTCGGCTGCTGCTGCTGCTGAATCGGCTCATTTCTTTTTCTTGCTATACTGT ACTGTTCGTGCCGCGGTGGTGTACATGAAGTGGTTAATTTGGTTGTTCTTCATGTTGAGTTCAGTGTGATAATTTGTAATCACAATCTATGTGTTTCTTTTTTTCTTTTGGTAAAATGGGTTCGAATCCAAAATTTGTAATCACAAATTCGCAATTAGCGCCCAGACAAGTGATTTGATTGATTGGCTAAAAAAAAA ] [+] EMBL AU162907 [ CGGAGCGCCGCCGCCGGAGCCGTTCACGGCG AAGAAGGACGGCCCCGAGAATCTCGTCTGATCAGCCTCGGCTGCTGCTGCTGCTGAATCGGCTCATTTCTTTTTCTTGCTATACTGT ACTGTTCGTGCCGCGGTGGTGTACATGAAGTGGTTAATTTGGTTGTTCTTCATGTTGAGTTCAGTGTGATAATTTGTAATCACAATCTATGTGTTTCTTTTTTTCTTTTGGTAAAATGGGTTCGAATCCAAAATTTGTAATCACAAATTCGCAATTAGCGCCCAGACAAGTGATTTGATTGATTGGCTAAAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||