cluster # 9917

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Oryza sativa
cluster # 9917 cluster # 9917 Sequences # 7 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9917#0 length = 824 sequences # 7
consensusID : consensus_9917#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 824
fasta sequence
                              [GCTCCTTCCGCTCGAGCATCTCTCTCTGGTCTCCGCTCGCCGCGGCTTCACGTGCTCCAAGCTCCCCCCCATGGCGGGCGCCTCGCTCACCCCAAGCCGAACTGGAGCCCAGAGCAGCCACCGGAAGCGCAAGGTCCCCGCGGCCGCTGCCGCCGCCCCGGCCCGGGAGGACGAGGCGGCTGAGGAGGAGGACATGGAGGAGCTGGAGCGG-G-AGGTGGACCGTCT-GGGCCGCCGCCTCCTCCAGCACCGCCGCGAAGACGCCGCCCGCCTCCTCAACGCCGCCGCCTCCCGCCTCACCGCCCTCCGCCCCCGCCTCCTCGAAGTTACAACTGCATCGCAGCATATTGCTGGAACACCAGTTGCGAAAGTTGACCAAGAGAAGAAGGAAAAACTAAGGATCGTCAAGGCCAAAAGTGAGGCGAATATTGGGGCTATGCCCATGGTGTTGAAGAGAATCGGTGAATCTATCGCAAAGATCGAGAAGCTTGAGCATTTGAATGTGAATATCCATCCCGTTTTCAAAACTAAACGGTAGTGATGGACTGATGGTAACATGTTCTTGTATGATTCATTATGCATACCATCTGTAGCATTTTGATGGTAAGTCTTTGTGTTGATTCAGCAGTATACCATTTGTAGCATTTTGATGTTGGAATAGGCTGATTCAGCAGCATGTAGTTTGAAAAGGGATTCAACAGAAGTTTGTAGTGGGAGTTTCTACTAACAAGACAGCTTTAGTTAGGCGTGGCTTGTAATATGTTTTCTACTTGTAGGTAATCAGAAAGCAACATGTAGCTGTTT-TCAAAAAAAAGGCTTGTAAGGCT]

[+] EMBL CB682686             [GCTCCTTCCGCTCGAGCATCTCTCTCTGGTCTCCGCTCGCCGCGGCTTCACGTGCTCCAAGCTCCCCCCCATGGCGGGCGCCTCGCTCACCCCAAGCCGAACTGGAGCCCAGAGCAGCCACCGGAAGCGCAAGGTCCCCGCGGCCGCTGCCGCCGCCCCGGCCCGGGAGGACGAGGCGGCTGAGGAGGAGGACATGGAGGAGCTGGAGCGG G AGGTGGACCGTCT GGGCCGCCGCCTCCTCCAGCACCGCCGCGAAGACGCCGCCCGCCTCCTCAACGCCGCCGCCTCCCGCCTCACCGCCCTCCGCCCCCGCCTCCTCGAAGTTACAACTGCATCGCAGCATATTGCTGGAACACCAGTTGCGAAAGTTGACCAAGAGAAGAAGGAAAAACTAAGGATCGTCAAGGCCAAAAGTGAGGCGAATATTGGGGCTATGCCCATGGTGTTGAAGAGAATCGGTGAATCTATCGCAAAGATCGAGAAGCTTGAGCATTTGAATGTGAATATCCATCCCGTTTTCAAAACTAAACGGTAGTGATGGACTGATGGTAACATGTTCTTGTATGATTCATTATGCATACCATCTGTAGCATTTTGATGGTAAGTCTTTGTGTTGATTCAGCAGTATACCATTTGTAGCATTTTGATGTTGGAATAGGCTGATTCAGCAGCATGTAGTTTGAAAAGGGATTCAACAAAAGTTTGTAGTGGGAGTTTCTACTAACAAGACAGCTTTAGTTAGGCGTGGCTTGTA                                                                       ]
[+] EMBL CF340321             [    ctgaaggagGAGCATCTCTCTCTGGTCTCCGCTCGCCGCGGCTTCACGTGCTCCAAGCTCCCCCCCATGGCGGGCGCCTCGCTCACCCCAAGCCGAACTGGAGCCCAGAGCAGCCACCGGAAGCGCAAGGTCCCCGCGGCCGCTGCCGCCGCCCCGGCCCGGGAGGACGAGGCGGCTGAGGAGGAGGACATGGAGGAGCTGGAGCGGNGAAGGTGGACCGTCTGGGGCCGNCGCCTCCTCCAGCACCGCCGCGAAGACGCCGCCCGCCTCCTCAACGCCGCCGCCTCCCGCCTCACCGCCCTCCGCCCCCGCCTCCTCGAAGTTACAACTGCATCGCAGCATATTGCTGGAACACCAGTTGCGAAAGTTGACCAAGAGAAGAAGGAAAAACTAAGGATCGTCAAGGCCAAAAGTGAGGCGAATATTGGGGCTATGCCCATGGTGTTGAAGAGAATCGGTGAATCTATCGCAAAGATCGAGAAGCTTGAGCATTTGAATGTGAATATCCATCCCGTTTTCAAAACTAAACGGTAGTGATGGACTGATGGTAACATGTTCTTGTATGATTCATTATGCATACCATCTGTAGCATTTTG                                                                                                                                                                                                                                    ]
[+] EMBL CF340575             [                         CTGGTCTCCGCTCGCCGCGGCTTCACGTGCTCCAAGCTCCCCCCCATGGCGGGCGCCTCGCTCACCCCAAGCCGAACTGGAGCCCAGAGCAGCCACCGGAAGCGCAAGGTCCCCGCGGCCGCTGCCGCCGCCCCGGCCCGGGAGGACGAGGCGGCTGAGGAGGAGGACATGGAGGAGCTGGAGCGG G AGGTGGACCGTCT GGGCCGCCGCCTCCTCCAGCACCGCCGCGAAGACGCCGCCCGCCTCCTCAACGCCGCCGCCTCCCGGCTCACCGCCCTCCGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CF339960             [                         CTGGTCTCCGCTCGCCGCGGCTTCACGTGCTCCAAGCTCCCCCCCATGGCGGGCGCCTCGCTCACCCCAAGCCGAACTGGAGCCCAGAGCAGCCACCGGAAGCGCAAGGTCCCCGCGGCCGCTGCCGCCGCCCCGGCCCGGGAGGACGAGGCGGCTGAGGAGGAGGACATGGAGGAGCTGGAGCGG G AGGTGGACCGTCT GGGCCGCCGCCTCCTCCAGCACCGCCGCGAAGACGCCGCCCGCCTCCTCAACGCCGCCGCCTCCCGCCTCACCGCCCTCCGCCCCCGCCTCCTCGAAGTTACAACTGCATCGCAGCATATTGCTGGAACACCAGTTGCGAAAGTTGACCAAGAGAAGAAGGAAAAACTAAGGATCGTCAAGGCCAAAAGTGAGGCGAATATTGGGGCTATGCCCATGGTGTTGAAGAGAATCGGTGAATCTATCGCAAAGATCGAGAAGCTTGAGCATTTGAATGTGAATATCCATCCCGTTTTCAAAACTAAACGGTAGTGATGGACTGATGGTAACATGTTCTTGTATGATTCATTATGCATACCA                                                                                                                                                                                                                                                  ]
[+] EMBL CF340364             [                         tTGGTCTCCGCTCGCCGCGGCTTCACGTGCTCCAAGCTCCCCCCCATGGCGGGCGCCTCGCTCACCCCAAGCCGAACTGGAGCCCAGAGCAGCCACCGGAAGCGCAAGGTCCCCGCGGCCGCTGCCGCCGCCCCGGCCCGGGAGGACGAGGCGGCTGAGGAGGAGGACATGGAGGAGCTGGAGCGG G AGGTGGACCGTCT GGGCCGCCGCCTCCTCCAGCACCGCCGCGAAGACGCCGCCCGCCTCCTCAACGCCGCCGCCTCCCGCCTCACCGCCCTCCGCCCCCGCCTCCTCGAAGTTACAACTGCATCGCAGCATATTGCTGGAACACCAGTTGCGAAAGTTGACCAAGAGAAGAAGGAAAAACTAAGGATCGTCAAGGCCAAAAGTGAGGCGAATATTGGGGCTATGCCCATGGTGTTGAAGAGAATCGGTGAATCTATCGCANAGATCGAGAAGCTTGAGCATTTGAATGTGAATATCCATCCCGTTTTCAAAACTAAACGGTAGTGATGGACTGATGGTAACATGTTCTTGTATGATTCATTATGCA                                                                                                                                                                                                                                                       ]
[-] EMBL CB682687             [                                                                           GGGCGCCTCGCTCACCTCAAGCCGAACTGGAGCCCAGAGCAGCCACCGGAAGCGCAAGGTCCCCGCGGCCGCTGCCGCCGCCCCGGCCCGGGAGGACGAGGCGGCTGAGGAGGAGGACATGGAGGAGCTGGAGCGG G AGGTGGACCGTTT GGGCCGCCGCCTCCTCCAGCACCGCCGCGAAGACGCCGCCCGCCTCTTCAACGCCGCCGCCTCCCGCCTCACCGCCCTCCGCCCCCGCCTCCTCGAAGTTACAACTGCATCGCAGCATATTGCTGGAACACCAGTTGCGAAAGTTGACCAAGAGAAGAAGGAAAAACTAAGGATCGTCAAGGCCAAAAGTGAGGCGAATATTGGGGCTATGCCCATGGTGTTGAAGAGAATCGGTGAATCTATCGCAAAGATCGAGAAGCTTGAGCATTTGAATGTGAATATCCATCCCGTTTTCAAAACTAAACGGTAGTGATGGACTGATGGTAACATGTTCTTGTATGATTCATTATGCATACCATCTGTAGCATTTTGATGGTAAGTCTTTGTGTTGATTCAGCAGTATACCATTTGTAGCATTTTGATGTTGGAATAGGCTGATTCAGCAGCATGTAGTTTGAAAAGGGATTCAACAGAAGTTTGTAGTGGGAGTTTCTACTAACAAGACAGCTTTAGTTAGGCGTGGCTTGTAATATGTTTTCTACTTGTAGGTAATCAGAAAGCAACATGTAGCTGTTT TCAAAAAAAAGG           ]
[+] EMBL CA764541             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ATTATGCATACCATCTGTAGCATTTTGATGGTAAGTCTTTGTGTTGATTCAGCAGTATACCATTTGTAGCATTTTGATGTTGGAATAGGCTGATTCAGCAGCATGTAGTTTGAAAAGGGGTTCAACAGAAGTTTGTAGTGGGAGTTTCTACTAACAAGACAGCTTTAGTTAGGCGTGGCTTGTGATATGTTTTCTACTTGTATTTAATCAGAAAGCAACATGTAGCTGTTTGTCACCACTCTTGCTTGTAAGGCT]




>consensus_9917#0
GCTCCTTCCGCTCGAGCATCTCTCTCTGGTCTCCGCTCGCCGCGGCTTCACGTGCTCCAA
GCTCCCCCCCATGGCGGGCGCCTCGCTCACCCCAAGCCGAACTGGAGCCCAGAGCAGCCA
CCGGAAGCGCAAGGTCCCCGCGGCCGCTGCCGCCGCCCCGGCCCGGGAGGACGAGGCGGC
TGAGGAGGAGGACATGGAGGAGCTGGAGCGGGAGGTGGACCGTCTGGGCCGCCGCCTCCT
CCAGCACCGCCGCGAAGACGCCGCCCGCCTCCTCAACGCCGCCGCCTCCCGCCTCACCGC
CCTCCGCCCCCGCCTCCTCGAAGTTACAACTGCATCGCAGCATATTGCTGGAACACCAGT
TGCGAAAGTTGACCAAGAGAAGAAGGAAAAACTAAGGATCGTCAAGGCCAAAAGTGAGGC
GAATATTGGGGCTATGCCCATGGTGTTGAAGAGAATCGGTGAATCTATCGCAAAGATCGA
GAAGCTTGAGCATTTGAATGTGAATATCCATCCCGTTTTCAAAACTAAACGGTAGTGATG
GACTGATGGTAACATGTTCTTGTATGATTCATTATGCATACCATCTGTAGCATTTTGATG
GTAAGTCTTTGTGTTGATTCAGCAGTATACCATTTGTAGCATTTTGATGTTGGAATAGGC
TGATTCAGCAGCATGTAGTTTGAAAAGGGATTCAACAGAAGTTTGTAGTGGGAGTTTCTA
CTAACAAGACAGCTTTAGTTAGGCGTGGCTTGTAATATGTTTTCTACTTGTAGGTAATCA
GAAAGCAACATGTAGCTGTTTTCAAAAAAAAGGCTTGTAAGGCT
clustalw multiple alignements is not computed in this case