cluster # 9935

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Oryza sativa
cluster # 9935 cluster # 9935 Sequences # 7 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9935#0 length = 1928 sequences # 7
consensusID : consensus_9935#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1928
fasta sequence
                              [TACTTGGATACCGTCCGGTCGCGTGCTG-GTTCTGCTCCTTCGCTGTTTAGACGCGTAATCCGCATGAACAATCCTGTCTCGATTTCATACTGATGATATTTGATCTGCTGCGCGGCTGCTCGTTACGTTGGGTGTTATTTGATAGTATTTCCTTGTGTTCTTGAGCTTGGTAAGTAAAGTGGTGCCGTGTCGGGTGTGAGGTTTTGGCATGCCCGCGGGGGCGAGGTCATGGCTCGCCGACCTGCGCGCGCGGTTCGGTGGCGGCGCCAGGGAGGAGGCGGGTCTCGGGATCCTGGCGTTCGAGGCGGCGGCGGCCATGTCGCGGC-TCGTGTCGCTCCACCGCTCGCTGTCTGACGTGGAGGTCAGGAGGCTCCGCGCGGACGCGCTGCGCGCCGAGGGCGTCGCGCGCGTCACGTCCACGGACCAGTCGCTCCTGCTCCGGCTCGCGTGCGGCGAGTTCGTGGCGGACCTCGACCATGCCGCCGGCACTGCCGCGCGCCTCGGGGCGCGGTGCTGCGCGGGCGCGCCGTTCCTGCACGATTTCGACCGCGTCTACGCCGAGGCGAAGCGCGGGAACGGCCTCGCGCGGCTGGACGCGACGGTTGGGTTCTACAGGGGCGCGGCGAAGCGGTTCAGGAAGATGGAGCGGCACGTGGCTGCGACGGCGAAGCTGTACGCGGAGATGGACGCGCTCAGCGAGCTGGAGGCGTCGGAGCGGCGGATGGAGCAGTGGATGAGGCATAGCGGGCCGATCCCGGCGCAGCCGGGGCCATCGGCCAAGAGGCAGGTCCCCGAACCTGGCGAGAAGCTGATACGCGAGCTCAACTCGCAGCGGCAGAAGGTGCGCCGACTCATGGAGAGCTCGCTCTGGAGTGTCGCCGCGCACAAGGTATCCAAGCTCATGGCCAAGTCGGTGCTCGCCGTGCTCGCGCGCATCTCAATAACATTCGGTGCGTACGTGCCGGGCTTGCCGCTTTTGACAGTAGGTCGCGCGTGGGCGCTCCGCCGCACGTCTGGCCCCTTACAGCAGGCGGCGTCACCGGCCGCGGCGATCCGGCACTCGGCTCCCATCTTTCGGCAGAAAGACACCGCCTTTTCAGCGTCGGAGTCCATCAAGCCCCCGGCGAGCACGGTTGGCGGCTCGGGGATGGAGCTGCGATACGCGAACATGATCGTGTGCGCCGAGATGCTGCTCAGGCAACTTTGGCCAACGATCCACAGCAACGAGGTGGACGCCGGGATGGATCTCTCGAAGAGAGACGAGCTGTACAAGATGCTGCCTGTGACCATCCGCACGGCCGTGAAGGCGAAGCTGAGAGAGAGCTGGAGAGGGCAGCCAGTGGACGAGGCTGCGGCGGCGGCGTCGATGGACGCGGTGGACAGGATGCTGCGGTGGTTGGGGCCTATGGCGCACGACACGGTGCGGTGGCACGACGAGCATAGCATGGAGCGGGCGCAGCGGTTCAGCATGCGGCCGCGCGTGCTGATGGTGCAGACGCTGCACTTCGCCGACCGGCACAAGGCAGAGAATGTCATCGTCGAGGTGCTCATCGGGCTCAGCTGCGTTTGCTGGTACGACGATGAGCGACGCCGTCCGGCCGATTGGGACGACGACGACTAGACTGTTGGGTCTGGCGCTCTACTGCCCGGTATATTGGCATGGTATATAAGCATAAAGCATTTGTATCCACCATTATGGATACACCGCAGGACAATTTTTTTTGTTATGATTTGAAGAGTGACACTGTGTGCTAGCTAGCTAAATGTTCTTGCATCCCAGCGAGAAAAAACAATATGATACCACTGTAAATACGTGGTAATGTACATATGTTTATTCAAGGGTAGGACATGTCTATTGAAAATCATGTAAGTATGAATTTGTGACGCATTGGATTCATGGAATTGTCTAGATTACTCTAAAAAAAAGA]

[+] EMBL CB640787             [  CTTGGATACCGTCCGGTCGCGTGCTG GTTCTGCTCCTTCGCTGTTTAGACGCGTAATCCGCATGAACAATCCTGTCTCGATTTCATACTGATGATATTTGATCTGCTGCGCGGCTGCTCGTTACGTTGGGTGTTATTTGATAGTATTTCCTTGTGTTCTTGAGCTTGGTAAGTAAAGTGGTGCCGTGTCGGGTGTGAGGTTTTGGCATGCCCGCGGGGGCGAGGTCATGGCTCGCCGACCTGCGCGCGCGGTTCGGTGGCGGCGCCAGGGAGGAGGCGGGTCTCGGGATCCTGGCGTTCGAGGCGGCGGCGGCCATGTCGCGGC TCGTGTCGCTCCACCGCTCGCTGTCTGACGTGGAGGTCAGGAGGCTCCGCGCGGACGCGCTGCGCGCCGAGGGCGTCGCGCGCGTCACGTCCACGGACCAGTCGCTCCTGCTCCGGCTCGCGTGCGGCGAGTTCGTGGCGGACCTCGACCATGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL OSS11586A            [tagatcgcaACCGTCCGGNNG G NCTGNGTTCTGCTCCTTCGCTGTTTAGACGCGTAATCCGCATGAACAATCCTGTCTCGATTTCATACTGATGATATTTGATCTGCTGCGCGGCTGCTCGTTACGTTGGGTGTTATTTGATAGTATTTCCTTGTGTTCTTGAGCTTGGTAAGTAAAGTGGTGCCGTGTCGGGTGTGAGGTTTTGGCATACCCCCGGGGGCGAGGTCATGGCTCGCGGACCTTCGCGCNNGNTTCGGTGGCGGCGCAAGGGAGGAGGCGGG CTCGGGATCCTGGCG TCGAGGCGGCGGCGG CATGTCGGGGCTTCGTGTCGTTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CB663485             [                          TG GTTCTGCTCCTTCGCTGTTTAGACGCGTAATCCGCATGAACAATCCTGTCTCGATTTCATACTGATGATATTTGATCTGCTGCGCGGCTGCTCGTTACGTTGGGTGTTATTTGATAGTATTTCCTTGTGTTCTTGAGCTTGGTAAGTAAAGTGGTGCCGTGTCGGGTGTGAGGTTTTGGCATGCCCGCGGGGGCGAGGTCATGGCTCGCCGACCTGCGCGCGCGGTTCGGTGGCGGCGCCAGGGAGGAGGCGGGTCTCGGGATCCTGGCGTTCGAGGCGGCGGCGGCCATGTCGCGGC TCGTGTCGCTCCACCGCTCGCTGTCTGACGTGGAGGTCAGGAGGCTCCGCGCGGACGCGCTGCGCGCCGAGGGCGTCGCGCGCGTCACGTCCACGGACCAGTCGCTCCTGCTCCGGCTCGCGTGCGGCGAGTTCGTGGCGGACCTCGACCATGCCGCCGGCACTGCCGCGCGCCTCGGGGCGCGGTGCTGCGCGGGCGCGCCGTTCCTGCACGATTTCGACCGCGTCTACGCCGAGGCGAAGCGCGGGAACGGCCTCGCGCGGCTGGACGCGACGGTTGGGTTCTACAGGGGCGCGGCGAAGCGGTTCAGGAAGATGGAGCGGCACGTGGCTGCGACGGCGAAGCTGTACGCGGAGATGGACGCGCTCAGCGAGCTGGAGGCGTCGGAGCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CB645813             [                                                                                                                                                                                                                                                                                                                                         CGTGCCTCTCCACCGCTCGCTGTCTGACGTGGAGGTCAGGAGGCTCCGCGCGGACGCGCTGCGCGCCGAGGGCGTCGCGCGCGTCACGTCCACGGACCAGTCGCTCCTGCTCCGGCTCGCGTGCGGCGAGTTCGTGGCGGACCTCGACCATGCCGCCGGCACTGCCGCGCGCCTCGGGGCGCGGTGCTGCGCGGGCGCGCCGTTCCTGCACGATTTCGACCGCGTCTACGCCGAGGCGAAGCGCGGGAACGGCCTCGCGCGGCTGGACGCGACGGTTGGGTTCTACAGGGGCGCGGCGAAGCGGTTCAGGAAGATGGAGCGGCACGTGGCTGCGACGGCGAAGCTGTACGCGGAGATGGACGCGCTCAGCGAGCTGGAGGCGTCGGAGCGGCGGATGGAGCAGTGGATGAGGCATAGCGGGCCGATCCCGGCGCAGCCGGGGCCATCGGCCAAGAGGCAGGTCCCCGAACCTGGCGAGAAGCTGATACGCGAGCTCAACTCGCAGCGGCAGAAGGTGCGCCGACTCATGGAGAGCTCGCTCTGGAGTGTCGCCGCGCACAAGGTATCCAAGCTCATGGCCAAGTCGGTGCTCGCCGTGCTCGCGCGCATCTCAATAACATTCGGTGCGTACGTGCCGGGCTTGCCGCTTTTGACAGTAGGTCGCGCGTGGGCGCTCCGCCGCACGTCTGGCCCCTTACAGCAGGCGGCGTCACCGGCCGCGGCGATCCGGCACTCGGCTCCCATCTTTCGGCAGAAAGACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AK108185             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GCCATCGGCCAAGAGGCAGGTCCCCGAACCTGGCGAGAAGCTGATACGCGAGCTCAACTCGCAGCGGCAGAAGGTGCGCCGACTCATGGAGAGCTCGCTCTGGAGTGTCGCCGCGCACAAGGTATCCAAGCTCATGGCCAAGTCGGTGCTCGCCGTGCTCGCGCGCATCTCAATAACATTCGGTGCGTACGTGCCGGGCTTGCCGCTTTTGACAGTAGGTCGCGCGTGGGCGCTCCGCCGCACGTCTGGCCCCTTACAGCAGGCGGCGTCACCGGCCGCGGCGATCCGGCACTCGGCTCCCATCTTTCGGCAGAAAGACACCGCCTTTTCAGCGTCGGAGTCCATCAAGCCCCCGGCGAGCACGGTTGGCGGCTCGGGGATGGAGCTGCGATACGCGAACATGATCGTGTGCGCCGAGATGCTGCTCAGGCAACTTTGGCCAACGATCCACAGCAACGAGGTGGATGCCGGGATGGATCTCTCGAAGAGAGACGAGCTGTACAAGATGCTGCCTGTGACCATCCGCACGGCCGTGAAGGCGAAGCTGAGAGAGAGCTGGAGAGGGCAGCCAGTGGACGAGGCTGCGGCGGCGGCGTCGATGGACGCGGTGGACAGGATGCTGCGGTGGTTGGGGCCTATGGCGCACGACACGGTGCGGTGGCACGACGAGCATAGCATGGAGCGGGCGCAGCGGTTCAGCATGCGGCCGCGCGTGCTGATGGTGCAGACGCTGCACTTCGCCGACCGGCACAAGGCAGAGAATGTCATCGTCGAGGTGCTCATCGGGCTCAGCTGCGTTTGCTGGTACGACGATGAGCGACGCCGTCCGGCCGATTGGGACGACGACGACTAGACTGTTGGGTCTGGCGCTCTACTGCCCGGTATATTGGCATGGTATATAAGCATAAAGCATTTGTATCCACCATTATGGATACACCGCAGGACAATTTTTTTTGTTATGATTTGAAGAGTGACACTGTGTGCTAGCTAGCTAAAAGTTCTTGCATCCCAGCGAGAAAAAACAATATGATACCACTGTAAATACGTGGTAATGTACATATGTTTATTCAAGGGTAGGACATGTCTATTGAAAATCATGTAAGTATGAATTTGTGAC                                           ]
[-] EMBL CB645814             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CCCCCGGCGAGCACGGTTGGCGGCTCGGGGATGGAGCTGCGATACGCGAACATGATCGTGTGCGCCGAGATGCTGCTCAGGCAACTTTGGCCAACGATCCACAGCAACGAGGTGGACGCCGGGATGGATCTCTCGAAGAGAGACGAGCTGTACAAGATGCTGCCTGTGACCATCCGCACGGCCGTGAAGGCGAAGCTGAGAGAGAGCTGGAGAGGGCAGCCAGTGGACGAGGCTGCGGCGGCGGCGTCGATGGACGCGGTGGACAGGATGCTGCGGTGGTTGGGGCCTATGGCGCACGACACGGTGCGGTGGCACGACGAGCATAGCATGGAGCGGGCGCAGCGGTTCAGCATGCGGCCGCGCGTGCTGATGGTGCAGACGCTGCACTTCGCCGACCGGCACAAGGCAGAGAATGTCATCGTCGAGGTGCTCATCGGGCTCAGCTGCGTTTGCTGGTACGACGATGAGCGACGCCGTCCGGCCGATTGGGACGACGACGACTAGACTGTTGGGTCTGGCGCTCTACTGCCCGGTATATTGGCATGGTATATAAGCATAAAGCATTTGTATCCACCATTATGGATACACCGCAGGACAATTTTTTTTGTTATGATTTGAAGAGTGACACTGTGTGCTAGCTAGCTAAATGTTCTTGCATCCCAGCGAGAAAAAACAATATGATACCACTGTAAATACGTGGTAATGTACATATGTTTATTCAAGGGTAGGACATGTCTATTGAAAATCATGTAAGTATGAATTTGTGGCGCATTGGATTCATGGAATTGTCTAGATTACTCTAAAAAAAAGA]
[-] EMBL CB663486             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TGGCCAACGATCCACAGCAACGAGGTGGACGCCGGGATGGATCTCTCGAAGAGAGACGAGCTGTACAAGATGCTGCCTGTGACCATCCGCACGGCCGTGAAGGCGAAGCTGAGAGAGAGCTGGAGAGGGCAGCCAGTGGACGAGGCTGCGGCGGCGGCGTCGATGGACGCGGTGGACAGGATGCTGCGGTGGTTGGGGCCTATGGCGCACGACACGGTGCGGTGGCACGACGAGCATAGCATGGAGCGGGCGCAGCGGTTCAGCATGCGGCCGCGCGTGCTGATGGTGCAGACGCTGCACTTCGCCGACCGGCACAAGGCAGAGAATGTCATCGTCGAGGTGCTCATCGGGCTCAGCTGCGTTTGCTGGTACGACGATGAGCGACGCCGTCCGGCCGATTGGGACGACGACGACTAGACTGTTGGGTCTGGCGCTCTACTGCCCGGTATATTGGCATGGTATATAAGCATAAAGCATTTGTATCCCCCATTATGGATACCCCGCAGGACAATTTTTTTTGTTATGATTTGAAGAGTGACACTGTGTGCTAGCTAGCTAAATGTTCTTGCATCCCAGCGAGAAAAAACAATATGATACCCCTGTAAATACGTGGTAATGTACATATGTTTATTCAAGGGTAGGACATGTCTATTGAAAATCATGTAAGTATGAATTTGTGAC CATTGGATTCATGGAATTGTCTAGATTACTCTAtat      ]




>consensus_9935#0
TACTTGGATACCGTCCGGTCGCGTGCTGGTTCTGCTCCTTCGCTGTTTAGACGCGTAATC
CGCATGAACAATCCTGTCTCGATTTCATACTGATGATATTTGATCTGCTGCGCGGCTGCT
CGTTACGTTGGGTGTTATTTGATAGTATTTCCTTGTGTTCTTGAGCTTGGTAAGTAAAGT
GGTGCCGTGTCGGGTGTGAGGTTTTGGCATGCCCGCGGGGGCGAGGTCATGGCTCGCCGA
CCTGCGCGCGCGGTTCGGTGGCGGCGCCAGGGAGGAGGCGGGTCTCGGGATCCTGGCGTT
CGAGGCGGCGGCGGCCATGTCGCGGCTCGTGTCGCTCCACCGCTCGCTGTCTGACGTGGA
GGTCAGGAGGCTCCGCGCGGACGCGCTGCGCGCCGAGGGCGTCGCGCGCGTCACGTCCAC
GGACCAGTCGCTCCTGCTCCGGCTCGCGTGCGGCGAGTTCGTGGCGGACCTCGACCATGC
CGCCGGCACTGCCGCGCGCCTCGGGGCGCGGTGCTGCGCGGGCGCGCCGTTCCTGCACGA
TTTCGACCGCGTCTACGCCGAGGCGAAGCGCGGGAACGGCCTCGCGCGGCTGGACGCGAC
GGTTGGGTTCTACAGGGGCGCGGCGAAGCGGTTCAGGAAGATGGAGCGGCACGTGGCTGC
GACGGCGAAGCTGTACGCGGAGATGGACGCGCTCAGCGAGCTGGAGGCGTCGGAGCGGCG
GATGGAGCAGTGGATGAGGCATAGCGGGCCGATCCCGGCGCAGCCGGGGCCATCGGCCAA
GAGGCAGGTCCCCGAACCTGGCGAGAAGCTGATACGCGAGCTCAACTCGCAGCGGCAGAA
GGTGCGCCGACTCATGGAGAGCTCGCTCTGGAGTGTCGCCGCGCACAAGGTATCCAAGCT
CATGGCCAAGTCGGTGCTCGCCGTGCTCGCGCGCATCTCAATAACATTCGGTGCGTACGT
GCCGGGCTTGCCGCTTTTGACAGTAGGTCGCGCGTGGGCGCTCCGCCGCACGTCTGGCCC
CTTACAGCAGGCGGCGTCACCGGCCGCGGCGATCCGGCACTCGGCTCCCATCTTTCGGCA
GAAAGACACCGCCTTTTCAGCGTCGGAGTCCATCAAGCCCCCGGCGAGCACGGTTGGCGG
CTCGGGGATGGAGCTGCGATACGCGAACATGATCGTGTGCGCCGAGATGCTGCTCAGGCA
ACTTTGGCCAACGATCCACAGCAACGAGGTGGACGCCGGGATGGATCTCTCGAAGAGAGA
CGAGCTGTACAAGATGCTGCCTGTGACCATCCGCACGGCCGTGAAGGCGAAGCTGAGAGA
GAGCTGGAGAGGGCAGCCAGTGGACGAGGCTGCGGCGGCGGCGTCGATGGACGCGGTGGA
CAGGATGCTGCGGTGGTTGGGGCCTATGGCGCACGACACGGTGCGGTGGCACGACGAGCA
TAGCATGGAGCGGGCGCAGCGGTTCAGCATGCGGCCGCGCGTGCTGATGGTGCAGACGCT
GCACTTCGCCGACCGGCACAAGGCAGAGAATGTCATCGTCGAGGTGCTCATCGGGCTCAG
CTGCGTTTGCTGGTACGACGATGAGCGACGCCGTCCGGCCGATTGGGACGACGACGACTA
GACTGTTGGGTCTGGCGCTCTACTGCCCGGTATATTGGCATGGTATATAAGCATAAAGCA
TTTGTATCCACCATTATGGATACACCGCAGGACAATTTTTTTTGTTATGATTTGAAGAGT
GACACTGTGTGCTAGCTAGCTAAATGTTCTTGCATCCCAGCGAGAAAAAACAATATGATA
CCACTGTAAATACGTGGTAATGTACATATGTTTATTCAAGGGTAGGACATGTCTATTGAA
AATCATGTAAGTATGAATTTGTGACGCATTGGATTCATGGAATTGTCTAGATTACTCTAA
AAAAAAGA
clustalw multiple alignements is not computed in this case