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Oryza sativa
cluster # 9946 cluster # 9946       Sequences # 7       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9946#0 length = 1120 sequences # 1  
consensus_9946#1 length = 1044 sequences # 2  
consensus_9946#2 length = 671 sequences # 4  

consensusID : consensus_9946#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1120
fasta sequence
                              [GAGGGGAATCGCAAAAGGCGCCTCCAGAAATTTCTCTCCTCTCCTCTTCCCCCACCGCGTCGCCCCATCTCGCCGCCGCCGCCGCCGCCGCCGCCGCTCGCCGCCGGTTCGGAGACCGCGTCACTGATTGGCCTGCCTCTCCTCGCACCGGGGGTTTTTCCAGCGCCCAAATCTCTCGGCGGGGACCTCCATGCCGGCGGTGGAGGGGATGCGGGACGTGGTCGCCACCGTGAGCGGCTACCACGGCGACGAGCGGCACAGGCTGGTCAGGCTCATCGCGGAGACCGGCGCGAGCTACGTCGGCGCCATGAGCAGATCCATCACCCACCTGGTGTGCTGGAGGCTTGAGGGGAAGAAGTATGACATCGCGAGGAGGCTTCGGACGCGCGTCGTCAGCCACCGGTGGTTCGAGGACTGCCTCAAGGAGGGGAGGCGCCTCCCCGAGAAACCCTACATGCTGGAAAGTGGTGAAGAAGCAGGGCCAGTCCCTGAGCTGCCCACTTTCCCGCGTTCACGATCCAAGAGAAATGCAAGCATGGAGGATAGATGCTTGAAAGAATTACCTGATGATTTCTGCAATACTTCATATGCGACCGATGTGCTTGTGGTTGCTGATTCAGGTTCTGATTGCAATCATCAGCGATGGTCTGATTCCTCCCTACTGAAAGAAAATTTTGTTGGTGATCGCGATAATTCTAAGATTGGTGCAACACACGTGAAGGAAAGAAGAAAACGTTTAAAGCATGCACAAAATTCAACCAATGAAGATGCACTAGATGCAGAAGACAATATTTCTAGGCTCATGGCAAGACAAGGGCGTTATGAGTCAAGTTATACTTCATCTCGGAGCGCATCAAATCAGAAGGGAGATTTGTTAAAGCTTCTGCATAATGATGATGCTAGCATGATGAGAAAAAGAAATAGTCTCATGAAAAAGGAAACAAGAACCAAGCTTGCAGGCTATCTTATAGAAAGCTGTGAAAATGGAAGTTTGACAGACAGCTTCGATGAACCTCAAATGTCGGATACTCCGCCCACTGAAGATCGAAGAAAAATAAGGAAGACAAGACTGCGACAAAGTACGTTGGACAGTATATATGATTATGGTGAAGCCAGTGAG]

[+] EMBL AK102789             [GAGGGGAATCGCAAAAGGCGCCTCCAGAAATTTCTCTCCTCTCCTCTTCCCCCACCGCGTCGCCCCATCTCGCCGCCGCCGCCGCCGCCGCCGCCGCTCGCCGCCGGTTCGGAGACCGCGTCACTGATTGGCCTGCCTCTCCTCGCACCGGGGGTTTTTCCAGCGCCCAAATCTCTCGGCGGGGACCTCCATGCCGGCGGTGGAGGGGATGCGGGACGTGGTCGCCACCGTGAGCGGCTACCACGGCGACGAGCGGCACAGGCTGGTCAGGCTCATCGCGGAGACCGGCGCGAGCTACGTCGGCGCCATGAGCAGATCCATCACCCACCTGGTGTGCTGGAGGCTTGAGGGGAAGAAGTATGACATCGCGAGGAGGCTTCGGACGCGCGTCGTCAGCCACCGGTGGTTCGAGGACTGCCTCAAGGAGGGGAGGCGCCTCCCCGAGAAACCCTACATGCTGGAAAGTGGTGAAGAAGCAGGGCCAGTCCCTGAGCTGCCCACTTTCCCGCGTTCACGATCCAAGAGAAATGCAAGCATGGAGGATAGATGCTTGAAAGAATTACCTGATGATTTCTGCAATACTTCATATGCGACCGATGTGCTTGTGGTTGCTGATTCAGGTTCTGATTGCAATCATCAGCGATGGTCTGATTCCTCCCTACTGAAAGAAAATTTTGTTGGTGATCGCGATAATTCTAAGATTGGTGCAACACACGTGAAGGAAAGAAGAAAACGTTTAAAGCATGCACAAAATTCAACCAATGAAGATGCACTAGATGCAGAAGACAATATTTCTAGGCTCATGGCAAGACAAGGGCGTTATGAGTCAAGTTATACTTCATCTCGGAGCGCATCAAATCAGAAGGGAGATTTGTTAAAGCTTCTGCATAATGATGATGCTAGCATGATGAGAAAAAGAAATAGTCTCATGAAAAAGGAAACAAGAACCAAGCTTGCAGGCTATCTTATAGAAAGCTGTGAAAATGGAAGTTTGACAGACAGCTTCGATGAACCTCAAATGTCGGATACTCCGCCCACTGAAGATCGAAGAAAAATAAGGAAGACAAGACTGCGACAAAGTACGTTGGACAGTATATATGATTATGGTGAAGCCAGTGAG]


>consensus_9946#0 GAGGGGAATCGCAAAAGGCGCCTCCAGAAATTTCTCTCCTCTCCTCTTCCCCCACCGCGT CGCCCCATCTCGCCGCCGCCGCCGCCGCCGCCGCCGCTCGCCGCCGGTTCGGAGACCGCG TCACTGATTGGCCTGCCTCTCCTCGCACCGGGGGTTTTTCCAGCGCCCAAATCTCTCGGC GGGGACCTCCATGCCGGCGGTGGAGGGGATGCGGGACGTGGTCGCCACCGTGAGCGGCTA CCACGGCGACGAGCGGCACAGGCTGGTCAGGCTCATCGCGGAGACCGGCGCGAGCTACGT CGGCGCCATGAGCAGATCCATCACCCACCTGGTGTGCTGGAGGCTTGAGGGGAAGAAGTA TGACATCGCGAGGAGGCTTCGGACGCGCGTCGTCAGCCACCGGTGGTTCGAGGACTGCCT CAAGGAGGGGAGGCGCCTCCCCGAGAAACCCTACATGCTGGAAAGTGGTGAAGAAGCAGG GCCAGTCCCTGAGCTGCCCACTTTCCCGCGTTCACGATCCAAGAGAAATGCAAGCATGGA GGATAGATGCTTGAAAGAATTACCTGATGATTTCTGCAATACTTCATATGCGACCGATGT GCTTGTGGTTGCTGATTCAGGTTCTGATTGCAATCATCAGCGATGGTCTGATTCCTCCCT ACTGAAAGAAAATTTTGTTGGTGATCGCGATAATTCTAAGATTGGTGCAACACACGTGAA GGAAAGAAGAAAACGTTTAAAGCATGCACAAAATTCAACCAATGAAGATGCACTAGATGC AGAAGACAATATTTCTAGGCTCATGGCAAGACAAGGGCGTTATGAGTCAAGTTATACTTC ATCTCGGAGCGCATCAAATCAGAAGGGAGATTTGTTAAAGCTTCTGCATAATGATGATGC TAGCATGATGAGAAAAAGAAATAGTCTCATGAAAAAGGAAACAAGAACCAAGCTTGCAGG CTATCTTATAGAAAGCTGTGAAAATGGAAGTTTGACAGACAGCTTCGATGAACCTCAAAT GTCGGATACTCCGCCCACTGAAGATCGAAGAAAAATAAGGAAGACAAGACTGCGACAAAG TACGTTGGACAGTATATATGATTATGGTGAAGCCAGTGAG



consensusID : consensus_9946#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1044
fasta sequence
                              [CCGCCACCATCCACCGCGCTGTCTCCATCTCCGCCCCCAGCCACCTCTTCGCCCTTCCCAGCCTCACTCCCCCAGCCAGGGAAGGACAGTGGAGCGCGGATCCGCCGCCTCCCGTCCTCGGTAACGATGGCGGCGCATGAATCCAGCGGCCTCCGTCCTCGGGAACGGCCTGGAGCACGCGGATCCGCCCTCCGGAGCGGCGGCGGTGTGCTTAGGCAGGCGGGAGCGAGCAGCTACGGCGGCGGCGGAGGCTACGGCGACGACGGCGCCGGTGGCTGCAACGACGACGACGGCGCCGATAGCTGCGACGACGACAATGACGATGACCAGCGGCAGGTCGGCGGCTTGCAATCGCGGGGCGGGCAGGTGGCGCGGGGCCGCGGGGCCGCGGGGGCGCGCCGGCGCGGGGGCCTCCTCGCCGCCCTCGACCGTCGACGCCCCGCACCACCTCCTCGCCGCTCACGACCGCCTCCTAGCGCGGAGGCTTCGGACGCTCGTCGTCAGCCAACGGTGGTTCGAGGACTGCCTCAAGGAGGGGAGGCGCCTCCCCAAGAAACCCTACATGTTGGAAAGTGGTGAAGAAGCAGGGCTAGTCCCTGAGCTGCCCACTTTCCCGCGTTCACGATCCAAGAAAAATGCAAGCATGGAGGATATATGCTTGAAAGAATTACCTGATGATTTCTGCAATACTTCATATACGACCGATGTGCTTGTGGTTGCTGATTCAGGTTCTGATTGCGAGCATCAGCGATGGTCTGATTCCTCCCTACTGAAAGAAGTAAGAACTATTATATCAATTATTGTCCTTGCATGATTTGATTTCCTGGTAGAATCCTTTACTGGGACTACATTCCACAAGTTAAGTTATATTCTGTTCAGTACTATGGTTTAGCAGACTACATTTCACCACGACCGCACTAGTTGCTGTTCAGTCAGTTCAGACAACAACCATGCAATTGTTTGGCATACCTGTCTATTGGCATTGCTGAATGCCAATCATGGCCTTATTACCAAGTGAAAAAAGTGCTGGATGATGGTGGATCT]

[+] EMBL AK119963             [CCGCCACCATCCACCGCGCTGTCTCCATCTCCGCCCCCAGCCACCTCTTCGCCCTTCCCAGCCTCACTCCCCCAGCCAGGGAAGGACAGTGGAGCGCGGATCCGCCGCCTCCCGTCCTCGGTAACGATGGCGGCGCATGAATCCAGCGGCCTCCGTCCTCGGGAACGGCCTGGAGCACGCGGATCCGCCCTCCGGAGCGGCGGCGGTGTGCTTAGGCAGGCGGGAGCGAGCAGCTACGGCGGCGGCGGAGGCTACGGCGACGACGGCGCCGGTGGCTGCAACGACGACGACGGCGCCGATAGCTGCGACGACGACAATGACGATGACCAGCGGCAGGTCGGCGGCTTGCAATCGCGGGGCGGGCAGGTGGCGCGGGGCCGCGGGGCCGCGGGGGCGCGCCGGCGCGGGGGCCTCCTCGCCGCCCTCGACCGTCGACGCCCCGCACCACCTCCTCGCCGCTCACGACCGCCTCCTAGCGCGGAGGCTTCGGACGCTCGTCGTCAGCCAACGGTGGTTCGAGGACTGCCTCAAGGAGGGGAGGCGCCTCCCCAAGAAACCCTACATGTTGGAAAGTGGTGAAGAAGCAGGGCTAGTCCCTGAGCTGCCCACTTTCCCGCGTTCACGATCCAAGAAAAATGCAAGCATGGAGGATATATGCTTGAAAGAATTACCTGATGATTTCTGCAATACTTCATATACGACCGATGTGCTTGTGGTTGCTGATTCAGGTTCTGATTGCGAGCATCAGCGATGGTCTGATTCCTCCCTACTGAAAGAAGTAAGAACTATTATATCAATTATTGTCCTTGCATGATTTGATTTCCTGGTAGAATCCTTTACTGGGACTACATTCCACAAGTTAAGTTATATTCTGTTCAGTACTATGGTTTAGCAGACTACATTTCACCACGACCGCACTAGTTGCTGTTCAGTCAGTTCAGACAACAACCATGCAATTGTTTGGCATACCTGTCTATTGGCATTGCTGAATGCCAATCATGGCCTTATTACCAAGTGAAAAAAGTGCTGGATGATGGTGGATCT]
[+] EMBL CF304973             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CACTTTCCCGCGTTCACGATCCAAGAAAAATGCAAGCATGGAGGATATATGCTTGAAAGAATTACCTGATGATTTCTGCAATACTTCATATACGACCGATGTGCTTGTGGTTGCTGATTCAGGTTCTGATTGCGAGCATCAGCGATGGTCTGATTCCTCCCTACTGAAAGAAGTAAGAACTATTATATCAATTATTGTCCTTGCATGATTTGATTTCCTGGTAGAATCCTTTACTGGGACTACATTCCACAAGTTAAGTTATATTCTGTTCAGTACTATGGTTTAGCAGACTACATTTCACCACGACCGCACTAGTTGCTGTTCAGTCAGTTCAGACAACAACCATGCAATTGTTTGGCATACCTGTCTATTGGCATTGCTGAATGCCAATCATGGCCTTAT                                    ]


>consensus_9946#1 CCGCCACCATCCACCGCGCTGTCTCCATCTCCGCCCCCAGCCACCTCTTCGCCCTTCCCA GCCTCACTCCCCCAGCCAGGGAAGGACAGTGGAGCGCGGATCCGCCGCCTCCCGTCCTCG GTAACGATGGCGGCGCATGAATCCAGCGGCCTCCGTCCTCGGGAACGGCCTGGAGCACGC GGATCCGCCCTCCGGAGCGGCGGCGGTGTGCTTAGGCAGGCGGGAGCGAGCAGCTACGGC GGCGGCGGAGGCTACGGCGACGACGGCGCCGGTGGCTGCAACGACGACGACGGCGCCGAT AGCTGCGACGACGACAATGACGATGACCAGCGGCAGGTCGGCGGCTTGCAATCGCGGGGC GGGCAGGTGGCGCGGGGCCGCGGGGCCGCGGGGGCGCGCCGGCGCGGGGGCCTCCTCGCC GCCCTCGACCGTCGACGCCCCGCACCACCTCCTCGCCGCTCACGACCGCCTCCTAGCGCG GAGGCTTCGGACGCTCGTCGTCAGCCAACGGTGGTTCGAGGACTGCCTCAAGGAGGGGAG GCGCCTCCCCAAGAAACCCTACATGTTGGAAAGTGGTGAAGAAGCAGGGCTAGTCCCTGA GCTGCCCACTTTCCCGCGTTCACGATCCAAGAAAAATGCAAGCATGGAGGATATATGCTT GAAAGAATTACCTGATGATTTCTGCAATACTTCATATACGACCGATGTGCTTGTGGTTGC TGATTCAGGTTCTGATTGCGAGCATCAGCGATGGTCTGATTCCTCCCTACTGAAAGAAGT AAGAACTATTATATCAATTATTGTCCTTGCATGATTTGATTTCCTGGTAGAATCCTTTAC TGGGACTACATTCCACAAGTTAAGTTATATTCTGTTCAGTACTATGGTTTAGCAGACTAC ATTTCACCACGACCGCACTAGTTGCTGTTCAGTCAGTTCAGACAACAACCATGCAATTGT TTGGCATACCTGTCTATTGGCATTGCTGAATGCCAATCATGGCCTTATTACCAAGTGAAA AAAGTGCTGGATGATGGTGGATCT



consensusID : consensus_9946#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 671
fasta sequence
                              [CATCCACCACCTCCTCGCCGCTCACGACCGCCTCCTAGCGCGGAGGCTTCGGACGCTCGTCGTCAGCCAACGGTGGTTCGAGGACTGCCTCAAGGAGGGGAGGCGCCT-CCCCAAGAAACCCTACATGTTGGAAAGTGGTGAAGAAGCAGGGCTAGTCCCTGAGCTGCCCACTTT-CCCGCGTTCACGATCCAAGAAAAATGCAAGCATGGAGGATATATGCTTGAAAGAATTACCTGATGATTTCTGCAATACTTCATATACGA-CCGATGTGCTTGTGGTTGCTGATTCAGGTTCTGATTGCGAGCATCAGCGATGGTCTGATTCCTCCCTACTGAAAGAAGTGCTGCAGGTCCTGCTGGT---GGGGGGAACCTGAACTTGGACCAGCAACTTTTTTGCTGCTGA-TTTTTTGGTTCAGCAATTTTTTGCTGCTGATTTTTGTGGTGCTGCAAGTGTTTTCACCAGTTTGTTGAACCAAAATTGGGTATACTTGAATGTTGTGTGATTCTTGGACAAGTTGGTAGC-TTGGTTCTGCTACACAAATTTTTGTTGCTTGCTGTTGAACTATTGTTTGATACTGGAAGTATCTGAGACTGTTATTAGGTTGAATCTAAGATGAACTATTGTTTGAATCCTGTTGTATTCTGATTTTATCTGTTATTAGTTGAAAAAAA]

[+] EMBL CF338012             [CATCCACCACCTCCTCGCCGCTCACGACCGCCTCCTAGCGCGGAGGCTTCGGACGCTCGTCGTCAGCCAACGGTGGTTCGAGGACTGCCTCAAGGAGGGGAGGCGCCT CCCCAAGAAACCCTACATGTTGGAAAGTGGTGAAGAAGCAGGGCTAGTCCCTGAGCTGCCCACTTT CCCGCGTTCACGATCCAAGAAAAATGCAAGCATGGAGGATATATGCTTGAAAGAATTACCTGATGATTTCTGCAATACTTCATATACGA CCGATGTGCTTGTGGTTGCTGATTCAGGTTCTGATTGCGAGCATCAGCGATGGTCTGATTCCTCCCTACTGAAAGAAGTGCTGCAGGTCCTGCTGGT   GGGGGGAACCTGAACTTGGACCAGCAACTTTTTTGCTGCTGA TTTTTTGGTTCAGCAATTTTTTGCTGCTGATTTTTGTGGTGCTGCAAGTGTTTTCACCAGTTTGTTGAACCAAAATTGGGTATACTTGAATGTTGTGTGATTCTTGGACAAGTTGGTAGCTTTGGTTCTGCTACACAAATTTTTGTTGCTTGCTGTTGAACTATTGTTTGATCCTG                                                                                              ]
[+] EMBL CF336138             [CATCCACCACCTCCTCGCCGCTCACGACCGCCTCCTAGCGCGGAGGCTTCGGACGCTCGTCGTCAGCCAACGGTGGTTCGAGGACTGCCTC AGGAGGGGAGGCGCCT CCCCAAGAAACCCTACATGTTGGAAAGTGGTGAAGAAGCAGGGCTAGTCCCTGAGCTGCCCACTTT CCCGCGTTCACGATCCAAGAAAAATGCAAGCATGGAGGATATATGCTTGAAAGAATTACCTGATGATTTCTGCAATACTTCATATACGA CCGATGTGCTTGTGGTTGCTGATTCAGGTTCTGATTGCGAGCATCAGCGATGGTCTGATTCCTCCCTACTGAAAGAAGTGCTGCAGGTCCTGCTGGTGNGGGGGGGAACCTGAACTTGGACCAGCAACTTTTTTGCTGCTGATTTTTTTGGTTCAGCAATTTTT                                                                                                                                                                                                                                                         ]
[-] EMBL CF338013             [                                                                        GTGGTTCGAGGACTGCCTCAAGGAGGGGAGGCGCCTCCCCCAAGAAACCCTACATGTT GAAAGTGGTGAAGAAGCAGGGCTAGTCCCTGAGCTGCCCACTTTCCCCGCGTTCACGATCCAAGAAAAATGCAAGCATGGAGGATATATGCTTGAAAGAATTACCTGATGATTTCTGCAATACTTCATATACGA CCGATGTGCTTGTGGTTGCTGATTCAGGTTCTGATTGCGAGCATCAGCGATGGTCTGATTCCTCCCTACTGAAAGAAGTGCTGCAGGTCCTGCTGGT   GGGGGGAACCTGAACTTGGACCAGCAACTTTTTTGCTGCTGA TTTTTTGGTTCAGCAATTTTTTGCTGCTGATTTTTGTGGTGCTGCAAGTGTTTTCACCAGTTTGTTGAACCAAAATTGGGTATACTTGAATGTTGTGTGATTCTTGGACAAGTTGGTAGC TTGGTTCTGCTACACAAATTTTTGTTGCTTGCTGTTGAACTATTGTTTGATACTGGAAGTATCTGAGACTGTTATTAGGTTGAATCTAAGATGAACTATTGTTTGAATCCTGTTGTATTCTGATTTTATCTGTTATTAGTTGAAAAAAA]
[-] EMBL CF336139             [                                                                                                                                  GGAAAGTGGTGAAGAAGCAGGGCTAGTCCCTGAGCTGCCCACTTT CCCCGGTTCACGATCCAAGAAAAATGCAAGCATGGAGGATATATGCTTGAAAGAATTACCTGATGATTTCTGCAATACTTCATATACGACCCGATGTGCTTGTGGTTGCTGATTCAGGTTCTGATTGCGAGCATCAGCGATGGTCTGATTCCTCCCTACTGAAAGAAGTGCTGCAGGTCCTGCTGGT   GGGGGGAACCTGAACTTGGACCAGCAACTTTTTTGCTGCTGA TTTTTTGGTTCAGCAATTTTTTGCTGCTGATTTTTGTGGTGCTGCAAGTGTTTTCACCAGTTTGTTGAACCAAAATTGGGTATACTTGAATGTTGTGTGATTCTTGGACAAGTTGGTAGC TTGGTTCTGCTACACAAATTTTTGTTGCTTGCTGTTGAACTATTGTTTGATACTGGAAGTATCTGAGACTGTTATTAGGTTGAATCTAAGATGAACTATTGTTTGAATCCTGTTGTATTCTGATTTTATCTGTTATTAGTTGAAAAAAA]


>consensus_9946#2 CATCCACCACCTCCTCGCCGCTCACGACCGCCTCCTAGCGCGGAGGCTTCGGACGCTCGT CGTCAGCCAACGGTGGTTCGAGGACTGCCTCAAGGAGGGGAGGCGCCTCCCCAAGAAACC CTACATGTTGGAAAGTGGTGAAGAAGCAGGGCTAGTCCCTGAGCTGCCCACTTTCCCGCG TTCACGATCCAAGAAAAATGCAAGCATGGAGGATATATGCTTGAAAGAATTACCTGATGA TTTCTGCAATACTTCATATACGACCGATGTGCTTGTGGTTGCTGATTCAGGTTCTGATTG CGAGCATCAGCGATGGTCTGATTCCTCCCTACTGAAAGAAGTGCTGCAGGTCCTGCTGGT GGGGGGAACCTGAACTTGGACCAGCAACTTTTTTGCTGCTGATTTTTTGGTTCAGCAATT TTTTGCTGCTGATTTTTGTGGTGCTGCAAGTGTTTTCACCAGTTTGTTGAACCAAAATTG GGTATACTTGAATGTTGTGTGATTCTTGGACAAGTTGGTAGCTTGGTTCTGCTACACAAA TTTTTGTTGCTTGCTGTTGAACTATTGTTTGATACTGGAAGTATCTGAGACTGTTATTAG GTTGAATCTAAGATGAACTATTGTTTGAATCCTGTTGTATTCTGATTTTATCTGTTATTA GTTGAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9946#1      CCGCCACCATCCACCGCGCTGTCTCCATCTCCGCCCCCAGCCACCTCTTCGCCCTTCCCA 60
consensus_9946#2      ------------------------------------------------------------
consensus_9946#0      ------------------------------------------------------------
                                                                                  

consensus_9946#1      GCCTCACTCCCCCAGCCAGGGAAGGACAGTGGAGCGCGGATCCGCCGCCTCCCGTCCTCG 120
consensus_9946#2      ------------------------------------------------------------
consensus_9946#0      -----------------------------------------------------------G 1
                                                                                  

consensus_9946#1      GTAACGATGGCGGCGCATGAATCCAGCGGCCTCCGTCCTCGGGAACGGCCTGGAGCACGC 180
consensus_9946#2      ------------------------------------------------------------
consensus_9946#0      AGGGGAATCGCAAAAGGCGCCTCCAGAAATTTCTCTCCTCTCCTCTTCCCCCACCGCGTC 61
                                                                                  

consensus_9946#1      GGATCCGCCCTCCGGAGCGGCGGCGGTGTGCTTAGGCAGGCGGGAGCGAGCAGCTACGGC 240
consensus_9946#2      ------------------------------------------------------------
consensus_9946#0      GCCCCATCTCGCCGCCGCCGCCGCCGCCGCCGCCGCTCGCCGCCGGTTCGGAG--ACCGC 119
                                                                                  

consensus_9946#1      GGCGGCGGAGGCTACGGCGACGACGGCGCCGGTGGCTGCAACGACGACGA-------CGG 293
consensus_9946#2      ------------------------------------------------------------
consensus_9946#0      GTCACTGATTGGCCTGCCTCTCCTCGCACCGGGGGTTTTTCCAGCGCCCAAATCTCTCGG 179
                                                                                  

consensus_9946#1      CGCCGATAGCTGCGACGACGACAATGACGATGACCAGCGGCAGGTCGGCGGCTTGCAATC 353
consensus_9946#2      ------------------------------------------------------------
consensus_9946#0      CGGGGACCTCCATGCCGGCGGTGGAGGGGATGCGGGACGTGGTCGCCACCGTGAGCGGCT 239
                                                                                  

consensus_9946#1      GCGGGGCGGGCAGGTGGCGCGGGGCCGCGGGGCCGCGGGGGCGCGCCGGCGCGGGGGCCT 413
consensus_9946#2      ------------------------------------------------------------
consensus_9946#0      ACCACGGCGACGAGCGGCACAGGCTGGTCAGGCTCATCGCGGAGACCGGCGCGAG--CTA 297
                                                                                  

consensus_9946#1      CCTCGCCGCCCTCGACCG-TCGACGCCCCGCACCACCTCCTCGCCGCTCACG-------A 465
consensus_9946#2      --------------------------CATCCACCACCTCCTCGCCGCTCACG-------A 27
consensus_9946#0      CGTCGGCGCCATGAGCAGATCCATCACCCACCTGGTGTGCTGGAGGCTTGAGGGGAAGAA 357
                                                *   *      * ** *  ***   *       *

consensus_9946#1      CCGCCTCCTAGCGCGGAGGCTTCGGACGCTCGTCGTCAGCCAACGGTGGTTCGAGGACTG 525
consensus_9946#2      CCGCCTCCTAGCGCGGAGGCTTCGGACGCTCGTCGTCAGCCAACGGTGGTTCGAGGACTG 87
consensus_9946#0      GTATGACATCGCGAGGAGGCTTCGGACGCGCGTCGTCAGCCACCGGTGGTTCGAGGACTG 417
                            * * *** *************** ************ *****************

consensus_9946#1      CCTCAAGGAGGGGAGGCGCCTCCCCAAGAAACCCTACATGTTGGAAAGTGGTGAAGAAGC 585
consensus_9946#2      CCTCAAGGAGGGGAGGCGCCTCCCCAAGAAACCCTACATGTTGGAAAGTGGTGAAGAAGC 147
consensus_9946#0      CCTCAAGGAGGGGAGGCGCCTCCCCGAGAAACCCTACATGCTGGAAAGTGGTGAAGAAGC 477
                      ************************* ************** *******************

consensus_9946#1      AGGGCTAGTCCCTGAGCTGCCCACTTTCCCGCGTTCACGATCCAAGAAAAATGCAAGCAT 645
consensus_9946#2      AGGGCTAGTCCCTGAGCTGCCCACTTTCCCGCGTTCACGATCCAAGAAAAATGCAAGCAT 207
consensus_9946#0      AGGGCCAGTCCCTGAGCTGCCCACTTTCCCGCGTTCACGATCCAAGAGAAATGCAAGCAT 537
                      ***** ***************************************** ************

consensus_9946#1      GGAGGATATATGCTTGAAAGAATTACCTGATGATTTCTGCAATACTTCATATACGACCGA 705
consensus_9946#2      GGAGGATATATGCTTGAAAGAATTACCTGATGATTTCTGCAATACTTCATATACGACCGA 267
consensus_9946#0      GGAGGATAGATGCTTGAAAGAATTACCTGATGATTTCTGCAATACTTCATATGCGACCGA 597
                      ******** ******************************************* *******

consensus_9946#1      TGTGCTTGTGGTTGCTGATTCAGGTTCTGATTGCGAGCATCAGCGATGGTCTGATTCCTC 765
consensus_9946#2      TGTGCTTGTGGTTGCTGATTCAGGTTCTGATTGCGAGCATCAGCGATGGTCTGATTCCTC 327
consensus_9946#0      TGTGCTTGTGGTTGCTGATTCAGGTTCTGATTGCAATCATCAGCGATGGTCTGATTCCTC 657
                      ********************************** * ***********************

consensus_9946#1      CCTACTGAAAGAAG----TAAGAACTATTATATCAATTA-------TTGTCCTTGCATGA 814
consensus_9946#2      CCTACTGAAAGAAG----TGCTGCAGGTCCTGCTGGTGGGGGGAACCTGAACTTGGACCA 383
consensus_9946#0      CCTACTGAAAGAAAATTTTGTTGGTGATCGCGATAATTCTAAGA--TTGGTGCAACACAC 715
                      *************     *        *        *          **       *   

consensus_9946#1      TTTGATTTCCTGGTAG-AATCCTTTACTGGG-ACTACATTCCACAAGTTAAGTTATATTC 872
consensus_9946#2      GCAACTTTTTTGCTGCTGATTTTTTGGTTCA-GCAATTTTTTGCT-GCTGATTTTTGTGG 441
consensus_9946#0      GTGAAGGAAAGAAGAAAACGTTTAAAGCATGCACAAAATTCAACCAATGAAGATGCACTA 775
                                            *          * *  **   *      *  *      

consensus_9946#1      TGTT--CAGTACTAT----GGTTTAGCAGACTACATTTCACCACGACCGCA--CTAGTTG 924
consensus_9946#2      TGCTGCAAGTGTTTTCACCAGTTTGTTGAACCAAAATTGGGTATACTTGAATGTTGTGTG 501
consensus_9946#0      GATGCAGAAGACAAT-----ATTTCTAGGCTCATGGCAAGACAAGGGCGTTATGAGTCAA 830
                             *      *      ***        *         *     *           

consensus_9946#1      CTGTTCAGTCAGTTCAGACA--A------CAACCATGCAATTGTTTGGCATACCTGTCTA 976
consensus_9946#2      ATTCTTGGACAAGTTGGTAG--CTTGGTTCTGCTACACAAATTTTTGT--TGCTTG-CTG 556
consensus_9946#0      GTTATACTTCATCTCGGAGCGCATCAAATCAGAAGGGAGATTTGTTAAAGCTTCTGCATA 890
                       *  *    **  *  *            *         * *  **        **  * 

consensus_9946#1      TTGG--CATTGCTGA-ATGCCAATCATGGCC----TTATTACCAAGTGAAAAAAGTGCTG 1029
consensus_9946#2      TTGAACTATTGTTTG-ATACTGGAAGTATCTGAGACTGTTATTAGGTTGAATCTAAGATG 615
consensus_9946#0      ATGA--TGATGCTAGCATGATGAGAAAAAGAAATAGTCTCATGAAAAAGGAAACAAGAAC 948
                       **      ** *   **                  * * *  *      *     *   

consensus_9946#1      GATGATGGT--GG-ATCT------------------------------------------ 1044
consensus_9946#2      AACTATTGTTTGA-ATCCTGTTGTATTCTGATTTTATCTGTTATTAGTTGAAAAAAA--- 671
consensus_9946#0      CAAGCTTGCAGGCTATCTTATAGAAAGCTGTGAAAATGGAAGTTTGACAGACAGCTTCGA 1008
                       *   * *   *  ***                                           

consensus_9946#1      ------------------------------------------------------------
consensus_9946#2      ------------------------------------------------------------
consensus_9946#0      TGAACCTCAAATGTCGGATACTCCGCCCACTGAAGATCGAAGAAAAATAAGGAAGACAAG 1068
                                                                                  

consensus_9946#1      ----------------------------------------------------
consensus_9946#2      ----------------------------------------------------
consensus_9946#0      ACTGCGACAAAGTACGTTGGACAGTATATATGATTATGGTGAAGCCAGTGAG 1120
                                                                          




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)