cluster # 9950

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Oryza sativa
cluster # 9950 cluster # 9950 Sequences # 7 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9950#0 length = 1190 sequences # 7
consensusID : consensus_9950#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1190
fasta sequence
                              [TGGATATGGTAGGGGTGGATTTGGACGAGGAAATCGAGGCAGAGGGAGAGGAAGAAATTTTGGTGATAGTGGATCCTCATGGAGCGGAGGAAGTTACAGAAATGATGAGTCACGTGGAGAGAGATCTGAAGATCGCTGGAACACACGAGATTCTGATGGTGGCAGAGGAAGAGGAAGAGGACACTTTGGCAGAGGTGATCGCAATCAAGGTAATAACTATGGTTCGGGTGACAACAATGACAGAACCTGGGGTTCTGGCAGGGGAAACAGGGACCAGGATGGTTGCAAAAATTGGAACCGAAATGATGACAGAAGACCGTTCGGTCAAGATCGAGGTGGTGACTGGTCCCAATCTTCCGACTGGAACGCCAACAAAGGACAGTCCAGCTGGGGAGCGCCAAAACCTTCTGGTGGAGATGACCAGGCAGGAAAAAACAATGGAAACAATCCGTGGGGTGCTCCTGCTGACAGCATGACTGGTGGTGGATCCGGTGGAGGAGGGTCTTGGAAAAATAAGACTGAGGATACCTGGAATTCGTCTGGAGGAACAAGGGATTCAGGTACGACCCCAGGAAAATCTTCTTGGGGTGGATCAGAAGATGGCCAAAAGAAAGAAGGATCATGGGGGAAAAGCGAGGGGAGCGGGAGACAAGTCGGTGGAGGCAGCTCCTGGGACAAGCCGGATGGAGGATGGAACAGCAGCAAGTGCGAGGGCACCCAAGGAGGTGGCGGCGGTAGCTCCTGGGACAAGGCGGATGGCGGGAACAGTAACAAGGGCACCCAAGGAGGTGGTGGCGGCAGCTCCTGGGACAAGGCAGATGGCGGATGGAACAGCAGCAGCAAGGGTGGGAGCTCCGGCAATGGTGGGTGGTAAGCTCGATCCAGGATCAGCTGCAATCCATTAGTGCATGTATATAATGGTTGCCATGCAGCTTGAACTTGCTGTATATTTCTACTCTTTCTAGACTTAGAACGCTATTATTAGTAATAACGTCGCCATGCTACTCTAAACTACGAACTTACCTTAATTCCAGCAGAACATTATCTATTGCTGACGGTTATTAAGGTAGCTTTGTATCACCATCTCTACGATTCCCAGGTGTTTTTATGCTCCTTTTGTTTTGACGATGTGATATTTTGTGTTAGTTTGATGGATGCGCCTCTGGGCATAATGATGAAGCTCTCAAACA]

[+] EMBL AK061526             [TGGATATGGTAGGGGTGGATTTGGACGAGGAAATCGAGGCAGAGGGAGAGGAAGAAATTTTGGTGATAGTGGATCCTCATGGAGCGGAGGAAGTTACAGAAATGATGAGTCACGTGGAGAGAGATCTGAAGATCGCTGGAACACACGAGATTCTGATGGTGGCAGAGGAAGAGGAAGAGGACACTTTGGCAGAGGTGATCGCAATCAAGGTAATAACTATGGTTCGGGTGACAACAATGACAGAACCTGGGGTTCTGGCAGGGGAAACAGGGACCAGGATGGTTGCAAAAATTGGAACCGAAATGATGACAGAAGACCGTTCGGTCAAGATCGAGGTGGTGACTGGTCTCAATCTTCCGACTGGAACGCCAACAAAGGACAGTCCAGCTGGGGAGCGCCAAAACCTTCTGGTGGAGATGACCAGGCAGGAAAAAACAATGGAAACAATCCGTGGGGTGCTCCTGCTGACAGCATGACTGGTGGTGGATCCGGTGGAGGAGGGTCTTGGAAAAATAAGACTGAGGATACCTGGAATTCGTCTGGAGGAACAAGGGATTCAGGTACGACCCCAGGAAAATCTTCTTGGGGTGGATCAGAAGATGGCCAAAAGAAAGAAGGATCATGGGGGAAAAGCGAGGGGAGCGGGAGACAAGTCGGTGGAGGCAGCTCCTGGGACAAGCCGGATGGAGGATGGAACAGCAGCAAGTGCGAGGGCACCCAAGGAGGTGGCGGCGGTAGCTCCTGGGACAAGGCGGATGGCGGGAACAGTAACAAGGGCACCCAAGGAGGTGGTGGCGGCAGCTCCTGGGACAAGGCAGATGGCGGATGGAACAGCAGCAGCAAGGGTGGGAGCTCCGGCAATGGTGGGTGGTAAGCTCGATCCAGGATCAGCTGCAATCCATTAGTGCATGTATATAATGGTTGCCATGCAGCTTGAACTTGCTGTATATTTCTACTCTTTCTAGACTTAGAACGCTATTATTAGTAATAACGTCGCCATGCTACTCTAAACTACGAACTTACCTTAATTCCAGCAGAACATTATCTATTGCTGACGGTTATTAAGGTAGCT                                                                                                                      ]
[+] EMBL AK061071             [                                                            TGGTGATAGTGGATCCTCATGGAGCGGAGGAAGTTACAGAAATGATGAGTCACGTGGAGAGAGATCTGAAGATCGCTGGAACACACGAGATTCTGATGGTGGCAGAGGAAGAGGAAGAGGACACTTTGGCAGAGGTGATCGCAATCAAGGTAATAACTATGGTTCGGGTGACAACAATGACAGAACCTGGGGTTCTGGCAGGGGAAACAGGGACCAGGATGGTTGCAAAAATTGGAACCGAAATGATGACAGAAGACCGTTCGGTCAAGATCGAGGTGGTGACTGGTCCCAATCTTCCGACTGGAACGCCAACAAAGGACAGTCCAGCTGGGGAGCGCCAAAACCTTCTGGTGGAGATGACCAGGCAGGAAAAAACAATGGAAACAATCCGTGGGGTGCTCCTGCTGACAGCATGACTGGTGGTGGATCCGGTGGAGGAGGGTCTTGGAAAAATAAGACTGAGGATACCTGGAATTCGTCTGGAGGAACAAGGGATTCAGGTACGACCCCAGGAAAATCTTCTTGGGGTGGATCAGAAGATGGCCAAAAGAAAGAAGGATCATGGGGGAAAAGCGAGGGGAGCGGGAGACAAGTCGGTGGAGGCAGCTCCTGGGACAAGCCGGATGGAGGATGGAACAGCAGCAAGTGCGAGGGCACCCAAGGAGGTGGCGGCGGTAGCTCCTGGGACAAGGCGGATGGCGGGAACAGTAACAAGGGCACCCAAGGAGGTGGTGGCGGCAGCTCCTGGGACAAGGCAGATGGCGGATGGAACAGCAGCAGCAAGGGTGGGAGCTCCGGCAATGGTGGGTGGTAAGCTCGATCCAGGATCAGCTGCAATCCATTAGTGCATGTATATAATGGTTGCCATGCAGCTTGAACTTGCTGTATATTTCTACTCTTTCTAGACTTAGAACGCTATTATTAGTAATAACGTCGCCATGCTACTCTAAACTACGAACTTACCTTAATTCCAGCAGAACATTATCTATTGCTGACGGTTATTAAGGTAGCTTTGTATCACCATCTCTACGATTCCCAGGTGTTTTTATGCTCCTTTTGTTTTGACGATGTGATATTTTGTGTTAGTTTGATGGATGCGCCTCTGGGCATAATGATGAAGCTCTCAAACA]
[-] EMBL CB631932             [                                                                                                                                                                                                                                                                                          TTGCAAAAATTGGAACCAAAATGATGACAGAAGACCGTTCGGTCAAGATCGAGGTGGTGACTGGTCCCAATCTTCCGACTGGAACGCCAACAAAGGACAGTCCAGCTGGGGAGCGCCAAAACCTTCTGGTGGAGATGACCAGGCAGGAAAAAACAATGGAAACAATCCGTGGGGTGCTCCTGCTGACAGTATGACTGGTGGTGGATCCGGTGGAGGAGGGTCTTGGAAAAATAAGACTGAGGATACCTGGAATTCGTCTGGAGGAACAAGGGATTCAGGTACGACCCCAGGAAAATCTTCTTGGGGTGGATCAGAAGATGGCCAAAAGAAAGAAGGATCATGGGGGAAAAGCGAGGGGAGCGGGAGACAAGTCGGTGGAGGCAGCTCCTGGGACAAGCCGGATGGAGGATGGAACAGCAGCAAGTGCGAGGGCACTCAAGGAGGTGGCGGCGGTAGCTCCTGGGACAAGGCGGATGGCGGGAACAGTAACAAGGGCACCCAAGGAGGTGGTGGCGGCAGCTCCTGGGACAAGGCAGATGGTGGATGGAACAGCAGCAGCAAGGGTGGGAGCTCCGGCAATGGTGGGTGGTAAGCTCGATCCAGGATCAGCTGCAATCCATTAGTGCATGTATATAATGGTTGCCATGCAGCTTGAACTTGCTGTATATTTCTGCTCTTTCTAGACTTACAACGCTATTATTAGTAATAACGTCGCCATGCTACTCTAAACTACGAACTTACCTTAATTCCAGCAGAACATTATCTATTGCTGACGGTTATT                                                                                                                               ]
[-] EMBL CB641409             [                                                                                                                                                                                                                                                                                             CAAAAATTGGAACCGAAATGATGACAGAAGACCGTTCGGTCAAGATCGAGGTGGTGACTGGTCCCAATCTTCCGACTGGAACGCCAACAAAGGACAGTCCAGCTGGGGAGCGCCAAAACCTTCTGGTGGAGATGACCAGGCAGGAAAAAACAATGGAAACAATCCGTGGGGTGCTCCTGCTGACAGCATGACTGGTGGTGGATCCGGTGGAGGAGGGTCTTGGAAAAATAAGACTGAGGATACCTGGAATTCGTCTGGAGGAACAAGGGATTCAGGTACGACCCCAGGAAAATCTTCTTGGGGTGGATCAGAAGATGGCCAAAAGAAAGAAGGATCATGGGGGAAAAGCGAGGGGAGCGGGAGACAAGTCGGTGGAGGCAGCTCCTGGGACAAGCCGGATGGAGGATGGAACAGCAGCAAGTGCGAGGGCACCCAAGGAGGTGGCGGCGGTAGCTCCTGGGACAAGGCGGATGGCGGGAACAGTAACAAGGGCACCCAAGGAGGTGGTGGCGGCAGCTCCTGGGACAAGGCAGATGGCGGATGGAACAGCAGCAGCAAGGGTGGGAGCTCCGGCAATGGTGGGTGGTAAGCTCGATCCAGGATCAGCTGCAATCCATTAGTGCATGTATATAATGGTTGCCATGCAGCTTGAACTTGCTGTATATTTCTACTCTTTCTAGACTTAGAACGCTATTATTAGTAATAACGTCGCCATGCTACTCTAAACTACGAAGTTCCCTTAATTCCAGCAGA                                                                                                                                                        ]
[-] EMBL D42578               [                                                                                                                                                                                                                                                                                                AAATT GAACCGAAATGATGACAGAAG  CGTTCGNTNNAGGTCGAGGTGGTGACTGGTCCCAATCTTCCGACTGG ACGCCAACAAAGGACAGTCCAGCTGGGGAGCGCC AANCCTTCTGGTGGAGATTACCAGGCAGGAAAAAACAATGGAANCAATCCGTGGGGTGCTCCT CTGACAGCATGACTGGTGGTGGATCCGGTGGAGGAGGGTCTTGGAAAAATAAGACTGAGGATCCCTGGAATTCGTCTGGAGNAACAAGGTATTCAGGTACGACCCCAGAAAAATCTTCTTGGGGTGGATCAGAAGATGGCNAAAAGAAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CB685542             [                                                                                                                                                                                                                                                                                                                                                                TCTTCCGACTGGAACGCCAACAAAGGACAGTCCAGCTGGGGAGCGCCAAAACCTTCTGGTGGAGATGACCAGGCAGGAAAAAACAATGGAAACAATCCGTGGGGTGCTCCTGCTGACAGCATGACTGGTGGTGGATCCGGTGGAGGAGGGTCTTGGAAAAATAAGACTGAGGATACCTGGAATTCGTCTGGAGGAACAAGGGATTCAGGTACGACCCCAGGAAAATCTTCTTGGGGTGGATCAGAAGATGGCCAAAAGAAAGAAGGATCATGGGGGAAAAGCGAGGGGAGCGGGAGACAAGTCGGTGGAGGCAGCTCCTGGGACAAGCCGGATGGAGGATGGAACAGCAGCAAGTGCGAGGGCACCCAAGGAGGTGGCGGCGGTAGCTCCTGGGACAAGGCGGATGGCGGGAACAGTAACAAGGGCACCCAAGGAGGTGGTGGCGGCAGCTCCTGGGACAAGGCAGATGGCGGATGGAACAGCAGCAGCAAGGGTGGGAGCTCCGGCAATGGTGGGTGGTAAGCTCGATCCAGGATCAGCTGCAATCCATTAGTGCATGTATATAATGGTTGCCATGCAGCTTGAACTGGCTGTATATTTCTACTCTTTCTAGACTTAGAACGCTATTATTAGTAATAACGTCGCCATGCTACTCTAAAAAAGGAACTTACCTTAATTCCAG                                                                                                                                                            ]
[-] EMBL CB668539             [                                                                                                                                                                                                                                                                                                                                                                                          ACAGTCCAGCTGGGGAGCGCCAAAACCTTCTGGTGGAGATGGCCAGGCAGGAAAAAACAATGGAAACAATCCGTGGGGTGCTCCTGCTGACAGCATGACTGGTGGTGGATCCGGTGGAGGAGGGTCTTGGAAAAATAAGACTGAGGATACCTGGAATTCGTCTGGAGGAACAAGGGATTCAGGTACGACCCCAGGAAAATCTTCTTGGGGTGGATCAGAAGATGGCCAAAAGAAAGAAGGATCATGGGGGAAAAGCGAGGGGAGCGGGAGACAAGTCGGTGGAGGCAGCTCCTGGGACAAGCCGGATGGAGGATGGAACAGCAGCAAGTGCGAGGGCACCCAAGGAGGTGGCGGCGGTAGCTCCTGGGACAAGGCGGATGGCGGGAACAGTAACAAGGGCCCCCAAGGAGGTGGTGGCGGCAGCTCCTGGGACAAGGCAGATGGCGGATGGAACAGCAGCAGCAAGGGTGGGAGCTCCGGCAATGGTGGGTGGTAAGCTCGATCCAGGATCAGCTGCAATCCATTAGTGCATGTATATAATGGTTGCCATGCAGCTTGAACTTGCTGTATATTTTTACTCTTTCTAGACTTAGAACGCTATTATTAGTAATAACGTCGCCATGCTACTTTAAACTAGGAACTTCCCTTAATTCCAGCAGAACATTATTTATTAAGGGCGGT                                                                                                                                   ]




>consensus_9950#0
TGGATATGGTAGGGGTGGATTTGGACGAGGAAATCGAGGCAGAGGGAGAGGAAGAAATTT
TGGTGATAGTGGATCCTCATGGAGCGGAGGAAGTTACAGAAATGATGAGTCACGTGGAGA
GAGATCTGAAGATCGCTGGAACACACGAGATTCTGATGGTGGCAGAGGAAGAGGAAGAGG
ACACTTTGGCAGAGGTGATCGCAATCAAGGTAATAACTATGGTTCGGGTGACAACAATGA
CAGAACCTGGGGTTCTGGCAGGGGAAACAGGGACCAGGATGGTTGCAAAAATTGGAACCG
AAATGATGACAGAAGACCGTTCGGTCAAGATCGAGGTGGTGACTGGTCCCAATCTTCCGA
CTGGAACGCCAACAAAGGACAGTCCAGCTGGGGAGCGCCAAAACCTTCTGGTGGAGATGA
CCAGGCAGGAAAAAACAATGGAAACAATCCGTGGGGTGCTCCTGCTGACAGCATGACTGG
TGGTGGATCCGGTGGAGGAGGGTCTTGGAAAAATAAGACTGAGGATACCTGGAATTCGTC
TGGAGGAACAAGGGATTCAGGTACGACCCCAGGAAAATCTTCTTGGGGTGGATCAGAAGA
TGGCCAAAAGAAAGAAGGATCATGGGGGAAAAGCGAGGGGAGCGGGAGACAAGTCGGTGG
AGGCAGCTCCTGGGACAAGCCGGATGGAGGATGGAACAGCAGCAAGTGCGAGGGCACCCA
AGGAGGTGGCGGCGGTAGCTCCTGGGACAAGGCGGATGGCGGGAACAGTAACAAGGGCAC
CCAAGGAGGTGGTGGCGGCAGCTCCTGGGACAAGGCAGATGGCGGATGGAACAGCAGCAG
CAAGGGTGGGAGCTCCGGCAATGGTGGGTGGTAAGCTCGATCCAGGATCAGCTGCAATCC
ATTAGTGCATGTATATAATGGTTGCCATGCAGCTTGAACTTGCTGTATATTTCTACTCTT
TCTAGACTTAGAACGCTATTATTAGTAATAACGTCGCCATGCTACTCTAAACTACGAACT
TACCTTAATTCCAGCAGAACATTATCTATTGCTGACGGTTATTAAGGTAGCTTTGTATCA
CCATCTCTACGATTCCCAGGTGTTTTTATGCTCCTTTTGTTTTGACGATGTGATATTTTG
TGTTAGTTTGATGGATGCGCCTCTGGGCATAATGATGAAGCTCTCAAACA
clustalw multiple alignements is not computed in this case