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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9971#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 4014 fasta sequence
[AGCAGCAGCAGCACAAATCAAGTGATCCGTAGTTGCTGCTTCTTCGAATTCTCCTCTCAATTCAACCTGCCTCGATCTCGCTCTCGCTCTCGCTCTCTACCCGAGTGCACCATTAAGGAGGATGAGTGCCGCGGCGACCACCGGCGGCGGCGGCGAGCGGCGGAGCCTCCGTGGCATGTTCAAGTTCGCGGACCGGGTGGACGTGCTGCTCATGGCGCTGGGCACGCTGGGTGCCATCGGCGACGGGTGCTCGACCAACCTGCTCCTCATCTTCGCCAGCGACGTGATGAACTCGCTCGGGTACGCGCGCGCCGGCGCCCACGGCGGCGCCGCCGCCGCCACCGGCGTGGACTTCATGCGCGAGGTCGAGAAGTCTTGCCTGAATTTCGTGTACCTGGCGTTCGCGGTGCTGGCAGTGGCGTTTATGGAGGGGTATTGCTGGAGCAGGACGAGCGAGAGGCAGGTGCTGAGGATCAGGTACCTGTACCTGCAGGCCATACTGCGGCAGGAGGTGGGCTTCTTCGACTCGCAGGAGGCCACCACCTCGGAGATCATCAACAGCATCTCCAAGGACGCCTCGCTCATTCAGGAAGTTCTCAGTGAGAAGGTTCCACTCTTTCTGATGCACTCTACAGTTTTCATCTCTGGGCTGGCATTCTCCACATATTTCTCCTGGAGGCTGGCTCTGGTTTCTTTTCCTCTGGTCCTGCTCCTGATAATTCCAGGGCTCATCTACGGCAAGTATCTCCTGTACCTCTCCCGACAATCGCGCCACGAGTACACAAACGCAAACTCGTTGGTTGAGCAAGCTCTTGGCTCTATCAAGACTGTCTACTCTTTCACTGCTGAGAAAAGGATAATCCAGAGATACACAGCAGTTCTTGACAAGACGATCAAGCTGGGGATTAGACAAGGTATTGCGAAAGGTTTGGCTGTCGGATTCACGGGCCTTTCCTTCGCCATCTGGGCTTTCCTCGCTTGGTACGGCAGTAGACTGGTGATGTACCATCATGAAAGCGGAGGAAGGATATATGCTGCAGGGATTTCCTTCGTTTTAGGCGGCCTATCCCTTGGAATGGCACTCCCTGAACTGAAGCATTTCACAGAAGCGTCGGTTGCTGCCACAAGAATTCTCGATCGGATAAACCGTGTGCCAGAGATAAATGCTGATGACCCCAAGGGACTTATTTTGGATCAAGTCCGGGGAGAGCTTCAGTTTGAGTCTGTCCGCTTTGTTTACCCATCGAGGCCTAACATGACGGTCCTCAAAGACTTCAACCTCCAGATTCCTGCTGGGCAAACTGTTGCCTTGGTTGGATCCAGTGGCAGCGGCAAGTCAACCGCAATAGCATTGGTTCAACGGTTCTATGATGCCACTGAAGGAACTGTCAAGGTTGACGGTGTCAACATTAAAGAACTCCAGCTCAAGTGGATCAGGAGCAAGATGGGGCTTGTCAGCCAAGATCATGCACTCTTCGGTACATCCATAAAAGAGAACATCTTGTTTGGCAAACCAGATGCAACAATGGATGAACTGTATGCAGCAGCCATGACAGCAAATGCTCACAACTTCATAAGGGGGCTTCCTGAGGAATATGAGACTAAGATTGGCGAGCGTGGAGCACTGCTATCTGGTGGCCAGAAGCAACGTATTGCCATTGCACGGGCAGTCATCAAGAACCCGGCTATACTTTTGCTCGATGAAGCCACAAGTGCACTTGATTCAGAATCAGAAAAGCTGGTGCAGCATGCACTTGACCAAGCATCTATGGGAAGAACAACACTGGTAGTAGCTCATAAGCTTTCCACAGTGAAGAATGCCGATCAGATTGCAGTGGTTGATGGGGGCACTATAGCTGAAATTGGCACACACGATGAACTGATTAATAAGGGTGGCCCATATTCACGACTTGTGAAACTGCAGAAGATGGTGAGCTACATCGATCAAGAAGGTGGTGACCAATTTAGGGCCTCTTCAGTGGCAAGGACCAGTACCAGCCGTCTCAGTATGTCCAGAGCAAGTCCAATGCCACTTACACCAGGTATTTCAAAGGAAACCGATTCCTCTGTTTCTCCCCCGGCACCATCTTTCTCCAGGCTTCTTGCGATGAATGCACCAGAGTGGAGACAAGCAGTCATAGGAAGTCTCTCTGCTTTGGTATATGGTTCCTTGCAGCCCATCTATGCTATAACCATCGGAGGAATGATTGCTGCATTTTTTGTTCAAGATCTCAAAGAGATGAATGCAATTATCAGCCGCTATGCCTTGATTTTCTGCTCATTGTCGGTGATATCCATTGTTGTTAATCTACTTCAACATTACAATTTTGCTTACATGGGAGAGCATCTAGTAAGGCGTATCAGAGTCCAAGTACTTGAAAAGATCTTAACCTTTGAGGCAGCATGGTTTGATGAAGAAACTAATTCAAGTGGTTCACTGTGCTCTCGGCTTAGCAATGAGGCTTCTCTTGTCAAAACCCTTGTTGCAGATAGAATTTCCCTACTGCTTCAGACAGCTTCTGGAATTATAATTGCAGTGACAATGGGCCTTATAGTAGCTTGGAAACTTGCTCTTGTCATGATCGCTGTACAGCCAACTACGATGATATGCTACTATGCCAAAAAGATAGTTCTCTCAAATGTGTCAAGGGACTTAGCAAAGGCTCAGCACCAAAGTACTCAGATTGCTATAGAAGCTG-TTACAACCACAGGATGGTGACCTCTTTTGGATGCTCATCAAAGGTTCTTCAGCTCTTTGAGCATACACAAGAGGAACCACTGAAGAGAGCAAGGAAGAAATCATGGGTGGCCGGGATCACCACTGGACTGTCACCTTGCCTTTCATTCTTGTCATGGGCTCTTGACTTCTGGTATGGTGGGAAATTGGCACAATCTGGGGAGATCTCCGCAGGTGATGTCTTCAAAACATTTTTTGTCTTGGTGAGTACAGGAAAGTTGATTGCTGATGCTGGCAGCATGACATCCGACCTGGCTAAGGGAGCAAATGCAGTTGCTTCAGTGTTTGAGGTGCTAGACAGGAAATCTATCTCTCCACAAAATTCACAGGTGGAAAAGGACAATCAGAAGAACAAAATACAAGGAAGGATAGAGTTCAAAAGGGTAGATTTTGCATATCCGACAAGACCACAATGCCTTATCCTGCAGGATTTTAGCTTGGATGTGAAAGCAGGAACAAGTATTGGTCTTGTTGGGAGAAGCGGCTGTGGAAAATCTACCATCATTGGTTTGATCCAGAGGTTCTATGATGTTGACAGAGGGGCTGTAAAGGTTGATGGTATGGATGTGAGGGAGATGGATATCCTTTGGTATCGAGGATTTACAGCCCTTGTTAGCCAGGAGCCTGCAATATTTTCTGGTAGTGTCAGGGACAACATTGCTTTTGGTAAACCAGAAGCTGATGAAGACGAGATCGTGGAAGCTGCTAAAGCTGCAAATGCACATGAATTCATATCATCTCTAAAGGACGGATATCATACTGACTGTGGTGAGCATGGATTACAACTATCAGGAGGGCAAAAGCAACGAATTGCAATTGCGAGGGCAATAATCCGGAATCCAGCAATACTTCTACTTGACGAAGCAACAAGTGCTCTCGATGCACAGTCAGAGCAAGTTGTGCAGGAAGCCCTTGATAGAATCATGTCAGGAAGGACTACAATTGTGGTGGCACATCGACTGAACACAATCAAGAATGTAGATTCGATTGCCTTCTTAGGAGAGGGTAAGGTAGTGGAACGTGGTACTTATCCACACCTCATGAGTAAGAAAGGAGCATTCTACAACCTAGCGGCTCTTCAGAAATAAACTGCTTGTATAATGTAAAGTACTGCCATAAGTGACATGACAACTTAATATAGCATAATATCAGTGCCACTTAACAAGTTTTGGGGTAATTTCTTCTTCTTCTGTCATCAGAAGATGTATCTTACCTAGAACTTGTCTTTCAAGAGGTCTAAGATATGAATAAATGCAAACTAGTACAAAAAAAAAAAA]
[+] EMBL AK067006 [AGCAGCAGCAGCACAAATCAAGTGATCCGTAGTTGCTGCTTCTTCGAATTCTCCTCTCAATTCAACCTGCCTCGATCTCGCTCTCGCTCTCGCTCTCTACCCGAGTGCACCATTAAGGAGGATGAGTGCCGCGGCGACCACCGGCGGCGGCGGCGAGCGGCGGAGCCTCCGTGGCATGTTCAAGTTCGCGGACCGGGTGGACGTGCTGCTCATGGCGCTGGGCACGCTGGGTGCCATCGGCGACGGGTGCTCGACCAACCTGCTCCTCATCTTCGCCAGCGACGTGATGAACTCGCTCGGGTACGCGCGCGCCGGCGCCCACGGCGGCGCCGCCGCCGCCACCGGCGTGGACTTCATGCGCGAGGTCGAGAAGTCTTGCCTGAATTTCGTGTACCTGGCGTTCGCGGTGCTGGCAGTGGCGTTTATGGAGGGGTATTGCTGGAGCAGGACGAGCGAGAGGCAGGTGCTGAGGATCAGGTACCTGTACCTGCAGGCCATACTGCGGCAGGAGGTGGGCTTCTTCGACTCGCAGGAGGCCACCACCTCGGAGATCATCAACAGCATCTCCAAGGACGCCTCGCTCATTCAGGAAGTTCTCAGTGAGAAGGTTCCACTCTTTCTGATGCACTCTACAGTTTTCATCTCTGGGCTGGCATTCTCCACATATTTCTCCTGGAGGCTGGCTCTGGTTTCTTTTCCTCTGGTCCTGCTCCTGATAATTCCAGGGCTCATCTACGGCAAGTATCTCCTGTACCTCTCCCGACAATCGCGCCACGAGTACACAAACGCAAACTCGTTGGTTGAGCAAGCTCTTGGCTCTATCAAGACTGTCTACTCTTTCACTGCTGAGAAAAGGATAATCCAGAGATACACAGCAGTTCTTGACAAGACGATCAAGCTGGGGATTAGACAAGGTATTGCGAAAGGTTTGGCTGTCGGATTCACGGGCCTTTCCTTCGCCATCTGGGCTTTCCTCGCTTGGTACGGCAGTAGACTGGTGATGTACCATCATGAAAGCGGAGGAAGGATATATGCTGCAGGGATTTCCTTCGTTTTAGGCGGCCTATCCCTTGGAATGGCACTCCCTGAACTGAAGCATTTCACAGAAGCGTCGGTTGCTGCCACAAGAATTCTCGATCGGATAAACCGTGTGCCAGAGATAAATGCTGATGACCCCAAGGGACTTATTTTGGATCAAGTCCGGGGAGAGCTTCAGTTTGAGTCTGTCCGCTTTGTTTACCCATCGAGGCCTAACATGACGGTCCTCAAAGACTTCAACCTCCAGATTCCTGCTGGGCAAACTGTTGCCTTGGTTGGATCCAGTGGCAGCGGCAAGTCAACCGCAATAGCATTGGTTCAACGGTTCTATGATGCCACTGAAGGAACTGTCAAGGTTGACGGTGTCAACATTAAAGAACTCCAGCTCAAGTGGATCAGGAGCAAGATGGGGCTTGTCAGCCAAGATCATGCACTCTTCGGTACATCCATAAAAGAGAACATCTTGTTTGGCAAACCAGATGCAACAATGGATGAACTGTATGCAGCAGCCATGACAGCAAATGCTCACAACTTCATAAGGGGGCTTCCTGAGGAATATGAGACTAAGATTGGCGAGCGTGGAGCACTGCTATCTGGTGGCCAGAAGCAACGTATTGCCATTGCACGGGCAGTCATCAAGAACCCGGCTATACTTTTGCTCGATGAAGCCACAAGTGCACTTGATTCAGAATCAGAAAAGCTGGTGCAGCATGCACTTGACCAAGCATCTATGGGAAGAACAACACTGGTAGTAGCTCATAAGCTTTCCACAGTGAAGAATGCCGATCAGATTGCAGTGGTTGATGGGGGCACTATAGCTGAAATTGGCACACACGATGAACTGATTAATAAGGGTGGCCCATATTCACGACTTGTGAAACTGCAGAAGATGGTGAGCTACATCGATCAAGAAGGTGGTGACCAATTTAGGGCCTCTTCAGTGGCAAGGACCAGTACCAGCCGTCTCAGTATGTCCAGAGCAAGTCCAATGCCACTTACACCAGGTATTTCAAAGGAAACCGATTCCTCTGTTTCTCCCCCGGCACCATCTTTCTCCAGGCTTCTTGCGATGAATGCACCAGAGTGGAGACAAGCAGTCATAGGAAGTCTCTCTGCTTTGGTATATGGTTCCTTGCAGCCCATCTATGCTATAACCATCGGAGGAATGATTGCTGCATTTTTTGTTCAAGATCTCAAAGAGATGAATGCAATTATCAGCCGCTATGCCTTGATTTTCTGCTCATTGTCGGTGATATCCATTGTTGTTAATCTACTTCAACATTACAATTTTGCTTACATGGGAGAGCATCTAGTAAGGCGTATCAGAGTCCAAGTACTTGAAAAGATCTTAACCTTTGAGGCAGCATGGTTTGATGAAGAAACTAATTCAAGTGGTTCACTGTGCTCTCGGCTTAGCAATGAGGCTTCTCTTGTCAAAACCCTTGTTGCAGATAGAATTTCCCTACTGCTTCAGACAGCTTCTGGAATTATAATTGCAGTGACAATGGGCCTTATAGTAGCTTGGAAACTTGCTCTTGTCATGATCGCTGTACAGCCAACTACGATGATATGCTACTATGCCAAAAAGATAGTTCTCTCAAATGTGTCAAGGGACTTAGCAAAGGCTCAGCACCAAAGTACTCAGATTGCTATAGAAGCTG TTACAACCACAGGATGGTGACCTCTTTTGGATGCTCATCAAAGGTTCTTCAGCTCTTTGAGCATACACAAGAGGAACCACTGAAGAGAGCAAGGAAGAAATCATGGGTGGCCGGGATCACCACTGGACTGTCACCTTGCCTTTCATTCTTGTCATGGGCTCTTGACTTCTGGTATGGTGGGAAATTGGCACAATCTGGGGAGATCTCCGCAGGTGATGTCTTCAAAACATTTTTTGTCTTGGTGAGTACAGGAAAGTTGATTGCTGATGCTGGCAGCATGACATCCGACCTGGCTAAGGGAGCAAATGCAGTTGCTTCAGTGTTTGAGGTGCTAGACAGGAAATCTATCTCTCCACAAAATTCACAGGTGGAAAAGGACAATCAGAAGAACAAAATACAAGGAAGGATAGAGTTCAAAAGGGTAGATTTTGCATATCCGACAAGACCACAATGCCTTATCCTGCAGGATTTTAGCTTGGATGTGAAAGCAGGAACAAGTATTGGTCTTGTTGGGAGAAGCGGCTGTGGAAAATCTACCATCATTGGTTTGATCCAGAGGTTCTATGATGTTGACAGAGGGGCTGTAAAGGTTGATGGTATGGATGTGAGGGAGATGGATATCCTTTGGTATCGAGGATTTACAGCCCTTGTTAGCCAGGAGCCTGCAATATTTTCTGGTAGTGTCAGGGACAACATTGCTTTTGGTAAACCAGAAGCTGATGAAGACGAGATCGTGGAAGCTGCTAAAGCTGCAAATGCACATGAATTCATATCATCTCTAAAGGACGGATATCATACTGACTGTGGTGAGCATGGATTACAACTATCAGGAGGGCAAAAGCAACGAATTGCAATTGCGAGGGCAATAATCCGGAATCCAGCAATACTTCTACTTGACGAAGCAACAAGTGCTCTCGATGCACAGTCAGAGCAAGTTGTGCAGGAAGCCCTTGATAGAATCATGTCAGGAAGGACTACAATTGTGGTGGCACATCGACTGAACACAATCAAGAATGTAGATTCGATTGCCTTCTTAGGAGAGGGTAAGGTAGTGGAACGTGGTACTTATCCACACCTCATGAGTAAGAAAGGAGCATTCTACAACCTAGCGGCTCTTCAGAAATAAACTGCTTGTATAATGTAAAGTACTGCCATAAGTGACATGACAACTTAATATAGCATAATATCAGTGCCACTTAACAAGTTTTGGGGTAATTTCTTCTTCTTCTGTCATCAGAAGATGTATCTTACCTAGAACTTGTCTTTCAAGAGGTCTAAGATATGAATAAAT ]
[+] EMBL CB677572 [ CCAGATTCCTGCTGGGCAAACTGTTGCCTTGGTTGGATCCAGTGGCAGCGGCAAGTCAACCGCAATAGCATTGGTTCAACGGTTCTATGATGCCACTGAAGGAACTGTCAAGGTTGACGGTGTCAACATTAAAGAACTCCAGCTCAAGTGGATCAGGAGCAAGATGGGGCTTGTCAGCCAAGATCATGCACTCTTCGGTACATCCATAAAAGAGAACATCTTGTTTGGCAAACCAGATGCAACAATGGATGAACTGTATGCAGCAGCCATGACAGCAAATGCTCACAACTTCATAAGGGGGCTTCCTGAGGAATATGAGACTAAGATTGGCGAGCGTGGAGCACTGCTATCTGGTGGCCAGAAGCAACGTATTGCCATTGCACGGGCAGTCATCAAGAACCCGGCTATACTTTTGCTCGATGAAGCCACAAGTGCACTTGATTCAGAATCAGAAAAGCTGGTGCAGCATGCACTTGACCAAGCATCTATGGGAAGAACAACACTGGTAGTAGCTCATAAGCTTTCCACAGTGAAGAATGCCGATCAGATTGCAGTGGTTGATGGGGGCACTATAGCTGAAATTGGCACACACGATGAACTGATTAATAAGGGTGGCCCATATTCACGACTTGTGAAACTGCAGAAGATGGTGAGCTACATCGATCAAGAAGGTGGTGACCAATTTAGGGCCTCTTCAGTGGCAAGGACCAGTACCAGCCGTCTCAGTATGTCCAGAGCAAGTCCAATGCCACTTACACCAGGTATTTCAAAGGAAACCGATTCCTCTGTTTCTCCCCCGGCA ]
[+] EMBL AK061902 [ CCATATTCACGACTTGTGAAACTGCAGAAGATGGTGAGCTACATCGATCAAGAAGGTGGTGACCAATTTAGGGCCTCTTCAGTGGCAAGGACCAGTACCAGCCGTCTCAGTATGTCCAGAGCAAGTCCAATGCCACTTACACCAGGTATTTCAAAGGAAACCGATTCCTCTGTTTCTCCCCCGGCACCATCTTTCTCCAGGCTTCTTGCGATGAATGCACCAGAGTGGAGACAAGCAGTCATAGGAAGTCTCTCTGCTTTGGTATATGGTTCCTTGCAGCCCATCTATGCTATAACCATCGGAGGAATGATTGCTGCATTTTTTGTTCAAGATCTCAAAGAGATGAATGCAATTATCAGCCGCTATGCCTTGATTTTCTGCTCATTGTCGGTGATATCCATTGTTGTTAATCTACTTCAACATTACAATTTCGCTTACATGGGAGAGCATCTAGTAAGGCGTATCAGAGTCCAAGTACTTGAAAAGATCTTAACCTTTGAGGCAGCATGGTTTGATGAAGAAACTAATTCAAGTGGTTCACTGTGCTCTCGGCTTAGCAATGAGGCTTCTCTTGTCAAAACCCTTGTTGCAGATAGAATTTCCCTACTGCTTCAGACAGCTTCTGGAATTATAATTGCAGTGACAATGGGCCTTATAGTAGCTTGGAAACTTGCTCTTGTCATGATCGCTGTACAGCCAACTACGATGATATGCTACTATGCCAAAAAGATAGTTCTCTCAAATGTGTCAAGGGACTTAGCAAAGGCTCAGCACCAAAGTACTCAGATTGCTATAGAAGCTGTTTACAACCACAGGATGGTGTCCTCTTTTGGATGCTCATCAAAGGTTCTTCAGCTCTTTGAGCATACACAAGAGGAACCACTGAAGAGAGCAAGGAAGAAATCATGGGTGGCCGGGATCACCACTGGACTGTCACCTTGCCTTTCATTCTTGTCATGGGCTCTTGACTTCTGGTATGGTGGGAAATTGGCACAATCTGGGGAGATCTCCGCAGGTGATGTCTTCAAAACATTTTTTGTCTTGGTGAGTACAGGAAAGTTGATTGCTGATGCTGGCAGCATGACATCCGACCTGGCTAAGGGAGCAAATGCAGTTGCTTCAGTGTTTGAGGTGCTAGACAGGAAATCTATCTCTCCACAAAATTCACAGGTGGAAAAGGACAATCAGAAGAACAAAATACAAGGAAGGATAGAGTTCAAAAGGGTAGATTTTGCATATCCGACAAGACCACAATGCCTTATCCTGCAGGATTTTAGCTTGGATGTGAAAGCAGGAACAAGTATTGGTCTTGTTGGGAGAAGCGGCTGTGGAAAATCTACCATCATTGGTTTGATCCAGAGGTTCTATGATGTTGACAGAGGGGCTGTAAAGGTTGATGGTATGGATGTGAGGGAGATGGATATCCTTTGGTATCGAGGATTTACAGCCCTTGTTAGCCAGGAGCCTGCAATATTTTCTGGTAGTGTCAGGGACAACATTGCTTTTGGTAAACCAGAAGCTGATGAAGACGAGATCGTGGAAGCTGCTAAAGCTGCAAATGCACATGAATTCATATCATCTCTAAAGGACGGATATCATACTGACTGTGGTGAGCATGGATTACAACTATCAGGAGGGCAAAAGCAACGAATTGCAATTGCGAGGGCAATAATCCGGAATCCAGCAATACTTCTACTTGACGAAGCAACAAGTGCTCTCGATGCACAGTCAGAGCAAGTTGTGCAGGAAGCCCTTGATAGAATCATGTCAGGAAGGACTACAATTGTGGTGGCACATCGACTGAACACAATCAAGAATGTAGATTCGATTGCCTTCTTAGGAGAGGGTAAGGTAGTGGAACGTGGTACTTATCCACACCTCATGAGTAAGAAAGGAGCATTCTACAACCTAGCGGCTCTTCAGAAATAAACTGCTTGTATAATGTAAAGTACTGCCATAAGTGACATGACAACTTAATATAGCATAATATCAGTGCCACTTAACAAGTTTTGGGGTAATTTCTTCTTCTTCTGTCATCAGAAGATGTATCTTACCTAGAACTTGTCTTTCAAGAGGTCTAAGATATGAATAAATGC ]
[-] EMBL CB677573 [ cTGGATGTGAAAGCAGGAACAAGTATTGGTCTTGTTGGGAGAAGCGGCTGTGGAAAATCTACCATCATTGGTTTGATCCAGAGGTTCTATGATGTTGACAGAGGGGCTGTAAAGGTTGATGGTATGGATGTGAGGGAGATGGATATCCTTTGGTATCGAGGATTTACAGCCCTTGTTAGCCAGGAGCCTGCAATATTTTCTGGTAGTGTCAGGGACAACATTGCTTTTGGTAAACCAGAAGCTGATGAAGACGAGATCGTGGAAGCTGCTAAAGCTGCAAATGCACATGAATTCATATCATCTCTAAAGGACGGATATCATACTGACTGTGGTGAGCATGGATTACAACTATCAGGAGGGCAAAAGCAACGAATTGCAATTGCGAGGGCAATAATCCGGAATCCAGCAATACTTCTACTTGACGAAGCAACAAGTGCTCTCGATGCACAGTCAGAGCAAGTTGTGCAGGAAGCCCTTGATAGAATCATGTCAGGAAGGACTACAATTGTGGTGGCACATCGACTGAACACAATCAAGAATGTAGATTCGATTGCCTTCTTAGGAGAGGGTAAGGTAGTGGAACGTGGTACTTATCCACACCTCATGAGTAAGAAAGGAGCATTCTACAACCTAGCGGCTCTTCAGAAATAAACTGCTTGTATAATGTAAAGTACTGCCATAAGTGACATGACAACTTAATATAGCATAATATCAGTGCCACTTAACAAGTTTTGGGGTAATTTCTTCTTCTTCTGTCATCAGAAGATGTATCTTACCTAGAACTTGTCTTTCAAGAGGTCTAAGATATGAATAAATGCA ]
[+] EMBL CA999011 [ GGCTGTAAAGGTTGATGGTATGGATGTGAGGGAGATGGATATCCTTTGGTATCGAGGATTTACAGCCCTTGTTAGCCAGGAGCCTGCAATATTTTCTGGTAGTGTCAGGGACAACATTGCTTTTGGTAAACCAGAAGCTGATGAAGACGAGATCGTGGAAGCTGCTAAAGCTGCAAATGCACATGAATTCATATCATCTCTAAAGGACGGATATCATACTGACTGTGGTGAGCATGGATTACAACTATCAGGAGGGCAAAAGCAACGAATTGCAATTGCGAGGGCAATAATCCGGAATCCAGCAATACTTCTACTTGACGAAGCAACAAGTGCTCTCGATGCACAGTCAGAGCAAGTTGTGCAGGAAGCCCTTGATAGAATCATGTCAGGAAGGACTACAATTGTGGTGGCACATCGACTGAACACAATCAAGAATGTAGATTCGATTGCCTTCTTAGGAGAGGGTAAGGTAGTGGAACGTGGTACTTATCCACACCTCATGAGTAAGAAAGGAGCATTCTACAACCTAGCGGCTCTTCAGA ]
[+] EMBL CF309617 [ CTAGCGGCTCTTCAGAAATAAACTGCTTGTATAATGTAAAGTACTGCCATAAGTGACATGACAACTTAATATAGCATAATATCAGTGCCACTTAACAAGTTTTGGGGTAATTTCTTCTTCTTCTGTCATCAGAAGATGTATCTTACCTAGAACTTGTCTTTCAAGAGGTCTAAGATATGAATAAATGCAAACTAGTACAAAAAAAAAAAA]
consensusID : consensus_9971#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 267 fasta sequence
[ATGGACTGAAGGAGTATTATACACCCCAGCGGCTCTTCAGAAATAAACTGCTTGCATAATGTAAAGTCCTGCCATAAGTAAAAAAACAACTTAATATAGCATAATATCAGTGCCACTTAACAAGTTTTGGGGTAATTTTTTCTTCTTCTGTCATCAAAAAATGAATCTAACCTAGAACAAATAAAACAAAAGGTAAAAAAAAAAAAACAACACAAACAAAAACAAAAAAAAAAAAAAAAAAAAAAAAACACTGTCATGCCGGTACGT]
[-] EMBL CF309618 [ATGGACTGAAGGAGTATTATACACCCCAGCGGCTCTTCAGAAATAAACTGCTTGCATAATGTAAAGTCCTGCCATAAGTAAAAAAACAACTTAATATAGCATAATATCAGTGCCACTTAACAAGTTTTGGGGTAATTTTTTCTTCTTCTGTCATCAAAAAATGAATCTAACCTAGAACAAATAAAACAAAAGGTAAAAAAAAAAAAACAACACAAACAAAAACAAAAAAAAAAAAAAAAAAAAAAAAACACTGTCATGCCGGTACGT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9971#0 AGCAGCAGCAGCACAAATCAAGTGATCCGTAGTTGCTGCTTCTTCGAATTCTCCTCTCAA 60
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 TTCAACCTGCCTCGATCTCGCTCTCGCTCTCGCTCTCTACCCGAGTGCACCATTAAGGAG 120
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 GATGAGTGCCGCGGCGACCACCGGCGGCGGCGGCGAGCGGCGGAGCCTCCGTGGCATGTT 180
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 CAAGTTCGCGGACCGGGTGGACGTGCTGCTCATGGCGCTGGGCACGCTGGGTGCCATCGG 240
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 CGACGGGTGCTCGACCAACCTGCTCCTCATCTTCGCCAGCGACGTGATGAACTCGCTCGG 300
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 GTACGCGCGCGCCGGCGCCCACGGCGGCGCCGCCGCCGCCACCGGCGTGGACTTCATGCG 360
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 CGAGGTCGAGAAGTCTTGCCTGAATTTCGTGTACCTGGCGTTCGCGGTGCTGGCAGTGGC 420
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 GTTTATGGAGGGGTATTGCTGGAGCAGGACGAGCGAGAGGCAGGTGCTGAGGATCAGGTA 480
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 CCTGTACCTGCAGGCCATACTGCGGCAGGAGGTGGGCTTCTTCGACTCGCAGGAGGCCAC 540
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 CACCTCGGAGATCATCAACAGCATCTCCAAGGACGCCTCGCTCATTCAGGAAGTTCTCAG 600
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 TGAGAAGGTTCCACTCTTTCTGATGCACTCTACAGTTTTCATCTCTGGGCTGGCATTCTC 660
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 CACATATTTCTCCTGGAGGCTGGCTCTGGTTTCTTTTCCTCTGGTCCTGCTCCTGATAAT 720
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 TCCAGGGCTCATCTACGGCAAGTATCTCCTGTACCTCTCCCGACAATCGCGCCACGAGTA 780
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 CACAAACGCAAACTCGTTGGTTGAGCAAGCTCTTGGCTCTATCAAGACTGTCTACTCTTT 840
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 CACTGCTGAGAAAAGGATAATCCAGAGATACACAGCAGTTCTTGACAAGACGATCAAGCT 900
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 GGGGATTAGACAAGGTATTGCGAAAGGTTTGGCTGTCGGATTCACGGGCCTTTCCTTCGC 960
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 CATCTGGGCTTTCCTCGCTTGGTACGGCAGTAGACTGGTGATGTACCATCATGAAAGCGG 1020
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 AGGAAGGATATATGCTGCAGGGATTTCCTTCGTTTTAGGCGGCCTATCCCTTGGAATGGC 1080
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 ACTCCCTGAACTGAAGCATTTCACAGAAGCGTCGGTTGCTGCCACAAGAATTCTCGATCG 1140
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 GATAAACCGTGTGCCAGAGATAAATGCTGATGACCCCAAGGGACTTATTTTGGATCAAGT 1200
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 CCGGGGAGAGCTTCAGTTTGAGTCTGTCCGCTTTGTTTACCCATCGAGGCCTAACATGAC 1260
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 GGTCCTCAAAGACTTCAACCTCCAGATTCCTGCTGGGCAAACTGTTGCCTTGGTTGGATC 1320
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 CAGTGGCAGCGGCAAGTCAACCGCAATAGCATTGGTTCAACGGTTCTATGATGCCACTGA 1380
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 AGGAACTGTCAAGGTTGACGGTGTCAACATTAAAGAACTCCAGCTCAAGTGGATCAGGAG 1440
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 CAAGATGGGGCTTGTCAGCCAAGATCATGCACTCTTCGGTACATCCATAAAAGAGAACAT 1500
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 CTTGTTTGGCAAACCAGATGCAACAATGGATGAACTGTATGCAGCAGCCATGACAGCAAA 1560
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 TGCTCACAACTTCATAAGGGGGCTTCCTGAGGAATATGAGACTAAGATTGGCGAGCGTGG 1620
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 AGCACTGCTATCTGGTGGCCAGAAGCAACGTATTGCCATTGCACGGGCAGTCATCAAGAA 1680
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 CCCGGCTATACTTTTGCTCGATGAAGCCACAAGTGCACTTGATTCAGAATCAGAAAAGCT 1740
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 GGTGCAGCATGCACTTGACCAAGCATCTATGGGAAGAACAACACTGGTAGTAGCTCATAA 1800
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 GCTTTCCACAGTGAAGAATGCCGATCAGATTGCAGTGGTTGATGGGGGCACTATAGCTGA 1860
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 AATTGGCACACACGATGAACTGATTAATAAGGGTGGCCCATATTCACGACTTGTGAAACT 1920
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 GCAGAAGATGGTGAGCTACATCGATCAAGAAGGTGGTGACCAATTTAGGGCCTCTTCAGT 1980
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 GGCAAGGACCAGTACCAGCCGTCTCAGTATGTCCAGAGCAAGTCCAATGCCACTTACACC 2040
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 AGGTATTTCAAAGGAAACCGATTCCTCTGTTTCTCCCCCGGCACCATCTTTCTCCAGGCT 2100
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 TCTTGCGATGAATGCACCAGAGTGGAGACAAGCAGTCATAGGAAGTCTCTCTGCTTTGGT 2160
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 ATATGGTTCCTTGCAGCCCATCTATGCTATAACCATCGGAGGAATGATTGCTGCATTTTT 2220
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 TGTTCAAGATCTCAAAGAGATGAATGCAATTATCAGCCGCTATGCCTTGATTTTCTGCTC 2280
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 ATTGTCGGTGATATCCATTGTTGTTAATCTACTTCAACATTACAATTTTGCTTACATGGG 2340
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 AGAGCATCTAGTAAGGCGTATCAGAGTCCAAGTACTTGAAAAGATCTTAACCTTTGAGGC 2400
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 AGCATGGTTTGATGAAGAAACTAATTCAAGTGGTTCACTGTGCTCTCGGCTTAGCAATGA 2460
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 GGCTTCTCTTGTCAAAACCCTTGTTGCAGATAGAATTTCCCTACTGCTTCAGACAGCTTC 2520
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 TGGAATTATAATTGCAGTGACAATGGGCCTTATAGTAGCTTGGAAACTTGCTCTTGTCAT 2580
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 GATCGCTGTACAGCCAACTACGATGATATGCTACTATGCCAAAAAGATAGTTCTCTCAAA 2640
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 TGTGTCAAGGGACTTAGCAAAGGCTCAGCACCAAAGTACTCAGATTGCTATAGAAGCTGT 2700
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 TACAACCACAGGATGGTGACCTCTTTTGGATGCTCATCAAAGGTTCTTCAGCTCTTTGAG 2760
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 CATACACAAGAGGAACCACTGAAGAGAGCAAGGAAGAAATCATGGGTGGCCGGGATCACC 2820
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 ACTGGACTGTCACCTTGCCTTTCATTCTTGTCATGGGCTCTTGACTTCTGGTATGGTGGG 2880
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 AAATTGGCACAATCTGGGGAGATCTCCGCAGGTGATGTCTTCAAAACATTTTTTGTCTTG 2940
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 GTGAGTACAGGAAAGTTGATTGCTGATGCTGGCAGCATGACATCCGACCTGGCTAAGGGA 3000
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 GCAAATGCAGTTGCTTCAGTGTTTGAGGTGCTAGACAGGAAATCTATCTCTCCACAAAAT 3060
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 TCACAGGTGGAAAAGGACAATCAGAAGAACAAAATACAAGGAAGGATAGAGTTCAAAAGG 3120
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 GTAGATTTTGCATATCCGACAAGACCACAATGCCTTATCCTGCAGGATTTTAGCTTGGAT 3180
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 GTGAAAGCAGGAACAAGTATTGGTCTTGTTGGGAGAAGCGGCTGTGGAAAATCTACCATC 3240
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 ATTGGTTTGATCCAGAGGTTCTATGATGTTGACAGAGGGGCTGTAAAGGTTGATGGTATG 3300
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 GATGTGAGGGAGATGGATATCCTTTGGTATCGAGGATTTACAGCCCTTGTTAGCCAGGAG 3360
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 CCTGCAATATTTTCTGGTAGTGTCAGGGACAACATTGCTTTTGGTAAACCAGAAGCTGAT 3420
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 GAAGACGAGATCGTGGAAGCTGCTAAAGCTGCAAATGCACATGAATTCATATCATCTCTA 3480
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 AAGGACGGATATCATACTGACTGTGGTGAGCATGGATTACAACTATCAGGAGGGCAAAAG 3540
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 CAACGAATTGCAATTGCGAGGGCAATAATCCGGAATCCAGCAATACTTCTACTTGACGAA 3600
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 GCAACAAGTGCTCTCGATGCACAGTCAGAGCAAGTTGTGCAGGAAGCCCTTGATAGAATC 3660
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 ATGTCAGGAAGGACTACAATTGTGGTGGCACATCGACTGAACACAATCAAGAATGTAGAT 3720
consensus_9971#1 ------------------------------------------------------------
consensus_9971#0 TCGATTGCCTTCTTAGGAGAGGGTAAGGTAGTGGAACGTGGTACTTATCCACACCTCATG 3780
consensus_9971#1 -----------------------------------------------------------A 1
consensus_9971#0 AGTAAGAAAGGAGCATTCTACAACCTAGCGGCTCTTCAGAAATAAACTGCTTGTATAATG 3840
consensus_9971#1 TGGACTGAAGGAGTATTATACACCCCAGCGGCTCTTCAGAAATAAACTGCTTGCATAATG 61
* * ****** *** **** ** *************************** ******
consensus_9971#0 TAAAGTACTGCCATAAGTGACATGACAACTTAATATAGCATAATATCAGTGCCACTTAAC 3900
consensus_9971#1 TAAAGTCCTGCCATAAGTAAAAAAACAACTTAATATAGCATAATATCAGTGCCACTTAAC 121
****** *********** * * ************************************
consensus_9971#0 AAGTTTTGGGGTAATTTCTTCTTCTTCTGTCATCAGAAGATGTATCTTACCTAGAACTTG 3960
consensus_9971#1 AAGTTTTGGGGTAATTTTTTCTTCTTCTGTCATCAAAAAATGAATCTAACCTAGAACAAA 181
***************** ***************** ** *** **** *********
consensus_9971#0 TCTTTCAAGAGGTCTAAGATATGAATAAATGCAAACTAGTACAAAAAAAAAAAA------ 4014
consensus_9971#1 TAAAACAAAAGGTAAAAAAAAAAAAACAACACAAACAAAAACAAAAAAAAAAAAAAAAAA 241
* *** **** ** * * ** ** ***** * **************
consensus_9971#0 --------------------------
consensus_9971#1 AAAAAAACACTGTCATGCCGGTACGT 267
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||