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Oryza sativa
cluster # 9994 cluster # 9994       Sequences # 7       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9994#0 length = 2606 sequences # 6  
consensus_9994#1 length = 370 sequences # 1  

consensusID : consensus_9994#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 2606
fasta sequence
                              [GTCCTATACCACCTTCCGTGCTTTCCGCGTCGTACGCTTGGCTCCTCTCACTCGGCGCCTCGGCTTTCGCTGCGCCTGCGCCCACCGCAAAACGCGACCG-CATCTCCTCCTCCTCCCGCATCGCTCGGCGCGGCGGCGGCGGCGGCGGCGAGGCGCGCGTGCTCTCCGAAGTGCCGGGCGGCGGCGGG-ACTTGGGGAGCCCATGGTGGCGGTGGC-GC-GGGGCCGGCGC-TGCAGGGGCGTGGTGCTGCTGCTCCTCCTCTCGTCGGTGCTCGCGCCCC-TCGTCCTCTACGGCGGCTCCCCCGTCTCCGTCTCCACCCTCCCGGACTCCACCGTGGCGAGCGGCGTGCTGGATCGGGATGGCGAGTACAATCTGGTGGTGGCTGCCTCCGACGTCTCCCTCACCAAAGATTTGACGATTGAGAGGCTAGGCGAGCACAAGAACCGGGTGCTATCAGCAACCGAAGATTGGCAAGTGGTTGAGGCGGCGAGTAAGAATCCGGCATTCGAGAAATCCGATGCAAGTGTATCGAGGAAGGACCCAGGATCAGGGGATGCCAATGTGGTGATTACTGAAGGGAATGGTGCTGCTCAGTCGGGACGGGATGGCGTTATCTGGGAGGTTGTCAGCAGGGACAGAGGTTCAGATGGGTTTACTCAACCATGGGAGATCAACGGAGGTGAGGAGCGGGATGGTGAAAGGGTTGATAGGGTAAAGTTGGGTGTTAGTGTGGAAGAACAGAATGATGGAACAGGTGAAACAGGGGTGAACAACATTGCTGGAACGCACACTAGTGGAAACCTGAATTCATCCCTAGAAAAGGAAAGGAGCACTGGTAGATTGTCTGAACAAGTTACAAAAGCTATTCCCAAAGAGTCTTACACACCAACAACTAACAGTAATTCTGCTCTCCCAACAAGTGTTAGTGCTGGTCATTCCACTACTTCCCCAGACGCTACCATCCGCACAATCAAGGACCAGTTGACGAGAGCAACGACATATCTGAGCCTTGTAGCTTCTAGAGGCAATCATGGTTTTGCAAGGGAGCTTCGTGCACGGATGAGGGATATCCAAAGAGTCCTAGGTGATGCAACCAGTGGTGGCCAGCTTCCTCAGAATGTACTTAGCAAAATAAGAGCAATGGAGCAAACATTGGGAAAGGGAAAGAGAATTCTTGATAGTTGCTCGGGTGCTCTGAACAGGCTCCGTGCAACCCTTCACTCAACAGAGGAGCGACTCCAATCTCATAAAAAGGAAACCAACTATCTAGCACAAGTAGCAGCAAAATCTTTACCAAAAGGACTTCATTGCCTTCCGCTGCGGCTTACAAATGAGTACTACTACACCAACTCCAACAATAAAAAATTCCCACATATAGAAAAGTTGGAAGATCCAAAACTCTATCACTATGCGTTGTTCTCAGATAATGTGTTGGCTGCTGCAGTGGTTGTAAACTCCACTATTATTCATGCTAAGAAACCAGCAGATCATGTCTTCCACATTGTCACGGATAGGCTTAACTATGCTGCAATGAAGATGTGGTTCTTGGCTAATCCCTTGGGTGAAGCAGCCATTCAGGTTCAAAACATTGAAGAGTTTACATGGCTGAATTCTACCTACAGTCCAGTTATGAAGCAGCTAGAATCACAGTCTATGATTGATTACTACTTCAAGAGTGGGCAGGCCAGGCGTGATGAAAATCCCAAGTTCCGGAACCCCAAGTACTTGTCAATGCTCAATCATCTGAGGTTTTATCTCCCTGAAATCTTCCCGAAGCTTAGCAAGGTGTTATTCCTGGATGATGACACTGTAGTACAGCAGGACTTAAGTGCGATTTGGTCCATTGATCTAAAAGGCAAGGTTAATGGTGCTGTTGAGACCTGTGGAGAGACCTTTCATAGGTTTGATAAGTACCTCAACTTCTCAAATCCTCTTATTGCCAGCAATTTTGACCCGCGTGCCTGCGGTTGGGCGTATGGCATGAATGTGTTCGATCTATCTGAGTGGAGAAGACAAAAGATTACTGACGTCTACCACAATTGGCAAAGACTGAACGAAAATAGGATATTGTGGAAGCTAGGTACTCTTCCTGCTGGTCTCGTAACA-TTTT--GGAACCGTACC-TTCCCTC-TTCATCACTCCTGGCATCAGTTGGGACTTGGGTACAACCCA-AACATCAATGAGAAGGATATCCGGAGGGCA-TCTGTCATACACTACAATGGTAATCTGAAA-CCCTGGCTTGAGATTGGA-TTGTCCAGATATCGCAAATACTGGTCAAAATACGTCGATTTCGATCAAGTCTTCCTACGGGACTGCAATATAAATCCCTGAATGACAGAGTGTTGTATTATCCAATTATTTTCTTTTCACCTGGTAGATTAATTCTTTACGCTCTAGGTTTTATTTAAGCTGTCTAGAGCGATATTCTTTTATCTGGGCTCTTCTCTCTTGTAAAGGTTCCAGCAAGTTAGTGGTAGGCTTTAGATCAGAGACATGTTCAATCACAGATCACGAAAGCTGCATCACATTTTGTAGTCACTAATGTTAATATAGTAAATTATTTGATTGTATTATTCCTATGGAAGAGTATTTAGGAGTACCTTTATTAAAAA]

[-] EMBL BI797486             [GTCCTATACCACCTTCCGTGCTTTCCGCGTCGTACGCTTGGCTCCTCTCACTCGGCGCCTCGGCTTTCGCTGCGCCTGCGCCCACCGCAAAACGCGACCG CATCTCCTCCTCCTCCCGCATCGCTCGGCGCGGCGGCGGCGGCGGCGGCGAGGCGCGCGTGCTCTCCGAAGTGCCGGGCGGCGGCGGGCACTTGGGGAGCCCATGGTGGCGGTGGCTGCTGGGGCCGGCGCATGCAGGGGCGTGGTGCTGCTGCTCCTCCTCTCGTCGGTGCTCGCGCCCCATCGTCCTCTACGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AK100641             [                                                         CCTCGGCTTTCGCTGCGCCTGCGCCCACCGCAAAACGCGACCGCCATCTCCTCCTCCTCCCGCATCGCTCGGCGCGGCGGCGGCGGCGGCGGCGAGGCGCGCGTGCTCTCCGAAGTGCAGGGAGGCGGCGGG AATTGGGGAGCCCATGGTGGCGGTGGC GC GGGGCCGGCGC TGCAGGGGCGTGGTGCTGCTGCTCCTCCTCTCGTCGGTGCTCGCGCCCC TCGTCCTCTACGGCGGCTCCCCCGTCTCCGTCTCCACCCTCCCGGACTCCACCGTGGCGAGCGGCGTGCTGGATCGGGATGGCGAGTACAATCTGGTGGTGGCTGCCTCCGACGTCTCCCTCACCAAAGATTTGACGATTGAGAGGCTAGGCGAGCACAAGAACCGGGTGCTATCAGCAACCGAAGATTGGCAAGTGGTTGAGGCGGCGAGTAAGAATCCGGCATTCGAGAAATCCGATGCAAGTGTATCGAGGAAGGACCCAGGATCAGGGGATGCCAATGTGGTGATTACTGAAGGGAATGGTGCTGCTCAGTCGGGACGGGATGGCGTTATCTGGGAGGTTGTCAGCAGGGACAGAGGTTCAGATGGGTTTACTCAACCATGGGAGATCAACGGAGGTGAGGAGCGGGATGGTGAAAGGGTTGATAGGGTAAAGTTGGGTGTTAGTGTGGAAGAACAGAATGATGGAACAGGTGAAACAGGGGTGAACAACATTGCTGGAACGCACACTAGTGGAAACCTGAATTCATCCCTAGAAAAGGAAAGGAGCACTGGTAGATTGTCTGAACAAGTTACAAAAGCTATTCCCAAAGAGTCTTACACACCAACAACTAACAGTAATTCTGCTCTCCCAACAAGTGTTAGTGCTGGTCATTCCACTACTTCCCCAGACGCTACCATCCGCACAATCAAGGACCAGTTGACGAGAGCAACGACATATCTGAGCCTTGTAGCTTCTAGAGGCAATCATGGTTTTGCAAGGGAGCTTCGTGCACGGATGAGGGATATCCAAAGAGTCCTAGGTGATGCAACCAGTGGTGGCCAGCTTCCTCAGAATGTACTTAGCAAAATAAGAGCAATGGAGCAAACATTGGGAAAGGGAAAGAGAATTCTTGATAGTTGCTCGGGTGCTCTGAACAGGCTCCGTGCAACCCTTCACTCAACAGAGGAGCGACTCCAATCTCATAAAAAGGAAACCAACTATCTAGCACAAGTAGCAGCAAAATCTTTACCAAAAGGACTTCATTGCCTTCCGCTGCGGCTTACAAATGAGTACTACTACACCAACTCCAACAATAAAAAATTCCCACATATAGAAAAGTTGGAAGATCCAAAACTCTATCACTATGCGTTGTTCTCAGATAATGTGTTGGCTGCTGCAGTGGTTGTAAACTCCACTATTATTCATGCTAAGAAACCAGCAGATCATGTCTTCCACATTGTCACGGATAGGCTTAACTATGCTGCAATGAAGATGTGGTTCTTGGCTAATCCCTTGGGTGAAGCAGCCATTCAGGTTCAAAACATTGAAGAGTTTACATGGCTGAATTCTACCTACAGTCCAGTTATGAAGCAGCTAGAATCACAGTCTATGATTGATTACTACTTCAAGAGTGGGCAGGCCAGGCGTGATGAAAATCCCAAGTTCCGGAACCCCAAGTACTTGTCAATGCTCAATCATCTGAGGTTTTATCTCCCTGAAATCTTCCCGAAGCTTAGCAAGGTGTTATTCCTGGATGATGACACTGTAGTACAGCAGGACTTAAGTGCGATTTGGTCCATTGATCTAAAAGGCAAGGTTAATGGTGCTGTTGAGACCTGTGGAGAGACCTTTCATAGGTTTGATAAGTACCTCAACTTCTCAAATCCTCTTATTGCCAGCAATTTTGACCCGCGTGCCTGCGGTTGGGCGTATGGCATGAATGTGTTCGATCTATCTGAGTGGAGAAGACAAAAGATTACTGACGTCTACCACAATTGGCAAAGACTGAACGAAAATAGGATATTGTGGAAGCTAGGTACTCTTCCTGCTGGTCTCGTAACA TTTT  GGAACCGTACC TTCCCTC TTCATCACTCCTGGCATCAGTTGGGACTTGGGTACAACCCA AACATCAATGAGAAGGATATCCGGAGGGCA TCTGTCATACACTACAATGGTAATCTGAAA CCCTGGCTTGAGATTGGA TTGTCCAGATATCGCAAATACTGGTCAAAATACGTCGATTTCGATCAAGTCTTCCTACGGGACTGCAATATAAATCCCTGAATGACAGAGTGTTGTATTATCCAATTATTTTCTTTTCACCTGGTAGATTAATTCTTTACGCTCTAGGTTTTATTTAAGCTGTCTAGAGCGATATTCTTTTATCTGGGCTCTTCTCTCTTGTAAAGGTTCCAGCAAGTTAGTGGTAGGCTTTAGATCAGAGACATGTTCAATCACAGATCACGAAAGCTGCATCACATTTTGTAGTCACTAATGTTAATATAGTAAATTATTTGATTGTATTATTCCT                                  ]
[+] EMBL CF304922             [                                                                                                                                                                                                                                                                                                                                                                                                                                                     GCACAAGAACCGGGTGCTATCAGCAACCGAAGATTGGCAAGTGGTTGAGGCGGCGAGTAAGAATCCGGCATTCGAGAAATCCGATGCAAGTGTATCGAGGAAGGACCCAGGATCAGGGGATGCCAATGTGGTGATTACTGAAGGGAATGGTGCTGCTCAGTCGGGACGGGATGGCGTTATCTGGGAGGTTGTCAGCAGGGACAGAGGTTCAGATGGGTTTACTCAACCATGGGAGATCAACGGAGGTGAGGAGCGGGATGGTGAAAGGGTTGATAGGGTAAAGTTGGGTGTTAGTGTGGAAGAACAGAATGATGGAACAGGTGAAACAGGGGTGAACAACATTGCTGGAACGCACACTAGTGGAAACCTGAATTCATCCCTAGAAAAGGAAAGGAGCACTGGTAGATTGTCTGAACAAGTTACAAAAGCTATTCCCAAAGAGTCTTACACACCAACAACTAACAGTAATTCTGCTCTCCCAACAAGTGTTAGTGCTGGTCATTCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL C74939               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CAATAAAAAATTCCCACATATAGAAAAGTTGGAAGATCCAAAACTCTATCACTATGCGTTGTTCTCAGATAATGTGTTGGCTGCTGCAGTGGTTGTAAACTCCACTATTATTCATGCTAAGAAACCAGCAGATCATGTCTTCCACATTGTCACGGATAGGCTTAACTATGCTGCAATGAAGATGTGGTTCTTGGCTAATCCCTTGGGTGAAGCAGCCATTCAGGTTCAAAACATTGAAGAGTTTACATGGCTGAATTCTACCTACAGTCCAGTTATGAAGCAGCTAGAATCACAGTCTATGATTGATTACTACTTCAAGAGTGGGCAGGCCAGGCGTGATGAAAATCCCAAGTTCCGGAACCCCAAGTACTTGTCAATGCTCAATCATCTGAGGTTTTATCTCCCTGAAATCTTCCCGAAGCTTAGCAAGGTGTTATTCCTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BI798473             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GATATTGTGGAA CTAGGTACTCTTCCTGCTGGTCTCGTAACA TTTTTGGGAACCGTACCTTTCCCTC TTCATCACTCCTGGCATCAGTTGGGACTTGGGTACAACCC  AACATCAATGAGAAGGATATCCGGAGGGCA TCTGTCATACACTACAATGGTAATCTGAAACCCCTGGCTTGAGATTGGA TTGTCCAGATATCGCAAATACTGGTCAAAATACGTCGATTTCGATCAAGTCTTCCTACGGGACTGCAATATAAATCCCTGAATGACAGAGTGTTGTATTATCC ATTATTTTCTTTTCACCTGGTAGATTAATTCTTTACGCTCTAGGTTTTATTTAAGCTGTCTAGAGCGATATTCTTTTATCTGGGCTCTTCTCTCTTGTAAAGGTTCCAGCAAGTTAGTGGTAGGCTTTAGATCAGAGACATGTTCAATCACAGATCACGAAAGCTGCATCACATTTTGTAGTCACTAATGTTAATATAGTAAATTATTTGATTGTATTATTCCTATGGAAGAGTATTTAGGAGTACCTTTATTAAAAA]
[+] EMBL BI799554             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GTAACACTTTT  GGAACCGTACC TTCCCTCGTTCATCACTCCT GCATCAGTTGGGACTTGGGTACAACCCAGAACATCCATGAGAAGGATATCCGGAGGGCACTCTGTCATACACTACCATGGTAATCTGAAA CCCTGGCTTGAGATTGGACTTGTCCAGATATCGCAAATACTGGTCAAAATACGTCGATTTCGATCAAGTCTTCCTACGGGACTGCAATATAAATCCCTGAATGACAGAGTGTTGTATTATCCAATTATTTTCTTTTCACCTGGTAGATTAATTCTTTACGCTCTAGGTTTTATTTAAGCTGTCTAGAGCGATATTCTTTTATCTGGGCTCTTCTCTCTTGTAAAGGTTCCAGC AGTTAGTGGTAGGCTTTAGATCAGAGACATGTTCAATCACAGATCCCGAAAGCTGCATCACATTTTGTAGTCACTAATGTTAATATAGTAAATTATTTGATTGTATTATTCCTATGGAAGAGTATTTAGGAGTACCTTTATTAAAAA]


>consensus_9994#0 GTCCTATACCACCTTCCGTGCTTTCCGCGTCGTACGCTTGGCTCCTCTCACTCGGCGCCT CGGCTTTCGCTGCGCCTGCGCCCACCGCAAAACGCGACCGCATCTCCTCCTCCTCCCGCA TCGCTCGGCGCGGCGGCGGCGGCGGCGGCGAGGCGCGCGTGCTCTCCGAAGTGCCGGGCG GCGGCGGGACTTGGGGAGCCCATGGTGGCGGTGGCGCGGGGCCGGCGCTGCAGGGGCGTG GTGCTGCTGCTCCTCCTCTCGTCGGTGCTCGCGCCCCTCGTCCTCTACGGCGGCTCCCCC GTCTCCGTCTCCACCCTCCCGGACTCCACCGTGGCGAGCGGCGTGCTGGATCGGGATGGC GAGTACAATCTGGTGGTGGCTGCCTCCGACGTCTCCCTCACCAAAGATTTGACGATTGAG AGGCTAGGCGAGCACAAGAACCGGGTGCTATCAGCAACCGAAGATTGGCAAGTGGTTGAG GCGGCGAGTAAGAATCCGGCATTCGAGAAATCCGATGCAAGTGTATCGAGGAAGGACCCA GGATCAGGGGATGCCAATGTGGTGATTACTGAAGGGAATGGTGCTGCTCAGTCGGGACGG GATGGCGTTATCTGGGAGGTTGTCAGCAGGGACAGAGGTTCAGATGGGTTTACTCAACCA TGGGAGATCAACGGAGGTGAGGAGCGGGATGGTGAAAGGGTTGATAGGGTAAAGTTGGGT GTTAGTGTGGAAGAACAGAATGATGGAACAGGTGAAACAGGGGTGAACAACATTGCTGGA ACGCACACTAGTGGAAACCTGAATTCATCCCTAGAAAAGGAAAGGAGCACTGGTAGATTG TCTGAACAAGTTACAAAAGCTATTCCCAAAGAGTCTTACACACCAACAACTAACAGTAAT TCTGCTCTCCCAACAAGTGTTAGTGCTGGTCATTCCACTACTTCCCCAGACGCTACCATC CGCACAATCAAGGACCAGTTGACGAGAGCAACGACATATCTGAGCCTTGTAGCTTCTAGA GGCAATCATGGTTTTGCAAGGGAGCTTCGTGCACGGATGAGGGATATCCAAAGAGTCCTA GGTGATGCAACCAGTGGTGGCCAGCTTCCTCAGAATGTACTTAGCAAAATAAGAGCAATG GAGCAAACATTGGGAAAGGGAAAGAGAATTCTTGATAGTTGCTCGGGTGCTCTGAACAGG CTCCGTGCAACCCTTCACTCAACAGAGGAGCGACTCCAATCTCATAAAAAGGAAACCAAC TATCTAGCACAAGTAGCAGCAAAATCTTTACCAAAAGGACTTCATTGCCTTCCGCTGCGG CTTACAAATGAGTACTACTACACCAACTCCAACAATAAAAAATTCCCACATATAGAAAAG TTGGAAGATCCAAAACTCTATCACTATGCGTTGTTCTCAGATAATGTGTTGGCTGCTGCA GTGGTTGTAAACTCCACTATTATTCATGCTAAGAAACCAGCAGATCATGTCTTCCACATT GTCACGGATAGGCTTAACTATGCTGCAATGAAGATGTGGTTCTTGGCTAATCCCTTGGGT GAAGCAGCCATTCAGGTTCAAAACATTGAAGAGTTTACATGGCTGAATTCTACCTACAGT CCAGTTATGAAGCAGCTAGAATCACAGTCTATGATTGATTACTACTTCAAGAGTGGGCAG GCCAGGCGTGATGAAAATCCCAAGTTCCGGAACCCCAAGTACTTGTCAATGCTCAATCAT CTGAGGTTTTATCTCCCTGAAATCTTCCCGAAGCTTAGCAAGGTGTTATTCCTGGATGAT GACACTGTAGTACAGCAGGACTTAAGTGCGATTTGGTCCATTGATCTAAAAGGCAAGGTT AATGGTGCTGTTGAGACCTGTGGAGAGACCTTTCATAGGTTTGATAAGTACCTCAACTTC TCAAATCCTCTTATTGCCAGCAATTTTGACCCGCGTGCCTGCGGTTGGGCGTATGGCATG AATGTGTTCGATCTATCTGAGTGGAGAAGACAAAAGATTACTGACGTCTACCACAATTGG CAAAGACTGAACGAAAATAGGATATTGTGGAAGCTAGGTACTCTTCCTGCTGGTCTCGTA ACATTTTGGAACCGTACCTTCCCTCTTCATCACTCCTGGCATCAGTTGGGACTTGGGTAC AACCCAAACATCAATGAGAAGGATATCCGGAGGGCATCTGTCATACACTACAATGGTAAT CTGAAACCCTGGCTTGAGATTGGATTGTCCAGATATCGCAAATACTGGTCAAAATACGTC GATTTCGATCAAGTCTTCCTACGGGACTGCAATATAAATCCCTGAATGACAGAGTGTTGT ATTATCCAATTATTTTCTTTTCACCTGGTAGATTAATTCTTTACGCTCTAGGTTTTATTT AAGCTGTCTAGAGCGATATTCTTTTATCTGGGCTCTTCTCTCTTGTAAAGGTTCCAGCAA GTTAGTGGTAGGCTTTAGATCAGAGACATGTTCAATCACAGATCACGAAAGCTGCATCAC ATTTTGTAGTCACTAATGTTAATATAGTAAATTATTTGATTGTATTATTCCTATGGAAGA GTATTTAGGAGTACCTTTATTAAAAA



consensusID : consensus_9994#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 370
fasta sequence
                              [TCTGAACCCNTGGCTTGAGATTGGATTGTCCAAATATCGCAAANACTGGTCAAAATACGTCGATTTCGATCAAGTCTTCCTACGGGACTGCAATATAAATCCCTGAATGACAGAGTGTTGTATTATCCAATTATTTTCTTTTCACCTGGTAGATTAATTCTTTACGCTCTAGGTTTTATTTAAGCTGTCTAGAGCGATATTCTTTTATCTGGGCTCTTCTCTCTTGTAAAGGTTCCAGCAAGTTAGTGGTAGGCTTTAGATCAGAGACATGTTCAATCNCAGATCACGAAAGCTGCATCACATTTTGTAGTCACTAATGTTAATATAGTAAATTATTTGATTGTATTATTCCTAAAAAAAAAAAAAAAAA]

[+] EMBL AU173036             [TCTGAACCCNTGGCTTGAGATTGGATTGTCCAAATATCGCAAANACTGGTCAAAATACGTCGATTTCGATCAAGTCTTCCTACGGGACTGCAATATAAATCCCTGAATGACAGAGTGTTGTATTATCCAATTATTTTCTTTTCACCTGGTAGATTAATTCTTTACGCTCTAGGTTTTATTTAAGCTGTCTAGAGCGATATTCTTTTATCTGGGCTCTTCTCTCTTGTAAAGGTTCCAGCAAGTTAGTGGTAGGCTTTAGATCAGAGACATGTTCAATCNCAGATCACGAAAGCTGCATCACATTTTGTAGTCACTAATGTTAATATAGTAAATTATTTGATTGTATTATTCCTAAAAAAAAAAAAAAAAA]


>consensus_9994#1 TCTGAACCCNTGGCTTGAGATTGGATTGTCCAAATATCGCAAANACTGGTCAAAATACGT CGATTTCGATCAAGTCTTCCTACGGGACTGCAATATAAATCCCTGAATGACAGAGTGTTG TATTATCCAATTATTTTCTTTTCACCTGGTAGATTAATTCTTTACGCTCTAGGTTTTATT TAAGCTGTCTAGAGCGATATTCTTTTATCTGGGCTCTTCTCTCTTGTAAAGGTTCCAGCA AGTTAGTGGTAGGCTTTAGATCAGAGACATGTTCAATCNCAGATCACGAAAGCTGCATCA CATTTTGTAGTCACTAATGTTAATATAGTAAATTATTTGATTGTATTATTCCTAAAAAAA AAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9994#0      GTCCTATACCACCTTCCGTGCTTTCCGCGTCGTACGCTTGGCTCCTCTCACTCGGCGCCT 60
consensus_9994#1      ------------------------------------------------------------
                                                                                  

consensus_9994#0      CGGCTTTCGCTGCGCCTGCGCCCACCGCAAAACGCGACCGCATCTCCTCCTCCTCCCGCA 120
consensus_9994#1      ------------------------------------------------------------
                                                                                  

consensus_9994#0      TCGCTCGGCGCGGCGGCGGCGGCGGCGGCGAGGCGCGCGTGCTCTCCGAAGTGCCGGGCG 180
consensus_9994#1      ------------------------------------------------------------
                                                                                  

consensus_9994#0      GCGGCGGGACTTGGGGAGCCCATGGTGGCGGTGGCGCGGGGCCGGCGCTGCAGGGGCGTG 240
consensus_9994#1      ------------------------------------------------------------
                                                                                  

consensus_9994#0      GTGCTGCTGCTCCTCCTCTCGTCGGTGCTCGCGCCCCTCGTCCTCTACGGCGGCTCCCCC 300
consensus_9994#1      ------------------------------------------------------------
                                                                                  

consensus_9994#0      GTCTCCGTCTCCACCCTCCCGGACTCCACCGTGGCGAGCGGCGTGCTGGATCGGGATGGC 360
consensus_9994#1      ------------------------------------------------------------
                                                                                  

consensus_9994#0      GAGTACAATCTGGTGGTGGCTGCCTCCGACGTCTCCCTCACCAAAGATTTGACGATTGAG 420
consensus_9994#1      ------------------------------------------------------------
                                                                                  

consensus_9994#0      AGGCTAGGCGAGCACAAGAACCGGGTGCTATCAGCAACCGAAGATTGGCAAGTGGTTGAG 480
consensus_9994#1      ------------------------------------------------------------
                                                                                  

consensus_9994#0      GCGGCGAGTAAGAATCCGGCATTCGAGAAATCCGATGCAAGTGTATCGAGGAAGGACCCA 540
consensus_9994#1      ------------------------------------------------------------
                                                                                  

consensus_9994#0      GGATCAGGGGATGCCAATGTGGTGATTACTGAAGGGAATGGTGCTGCTCAGTCGGGACGG 600
consensus_9994#1      ------------------------------------------------------------
                                                                                  

consensus_9994#0      GATGGCGTTATCTGGGAGGTTGTCAGCAGGGACAGAGGTTCAGATGGGTTTACTCAACCA 660
consensus_9994#1      ------------------------------------------------------------
                                                                                  

consensus_9994#0      TGGGAGATCAACGGAGGTGAGGAGCGGGATGGTGAAAGGGTTGATAGGGTAAAGTTGGGT 720
consensus_9994#1      ------------------------------------------------------------
                                                                                  

consensus_9994#0      GTTAGTGTGGAAGAACAGAATGATGGAACAGGTGAAACAGGGGTGAACAACATTGCTGGA 780
consensus_9994#1      ------------------------------------------------------------
                                                                                  

consensus_9994#0      ACGCACACTAGTGGAAACCTGAATTCATCCCTAGAAAAGGAAAGGAGCACTGGTAGATTG 840
consensus_9994#1      ------------------------------------------------------------
                                                                                  

consensus_9994#0      TCTGAACAAGTTACAAAAGCTATTCCCAAAGAGTCTTACACACCAACAACTAACAGTAAT 900
consensus_9994#1      ------------------------------------------------------------
                                                                                  

consensus_9994#0      TCTGCTCTCCCAACAAGTGTTAGTGCTGGTCATTCCACTACTTCCCCAGACGCTACCATC 960
consensus_9994#1      ------------------------------------------------------------
                                                                                  

consensus_9994#0      CGCACAATCAAGGACCAGTTGACGAGAGCAACGACATATCTGAGCCTTGTAGCTTCTAGA 1020
consensus_9994#1      ------------------------------------------------------------
                                                                                  

consensus_9994#0      GGCAATCATGGTTTTGCAAGGGAGCTTCGTGCACGGATGAGGGATATCCAAAGAGTCCTA 1080
consensus_9994#1      ------------------------------------------------------------
                                                                                  

consensus_9994#0      GGTGATGCAACCAGTGGTGGCCAGCTTCCTCAGAATGTACTTAGCAAAATAAGAGCAATG 1140
consensus_9994#1      ------------------------------------------------------------
                                                                                  

consensus_9994#0      GAGCAAACATTGGGAAAGGGAAAGAGAATTCTTGATAGTTGCTCGGGTGCTCTGAACAGG 1200
consensus_9994#1      ------------------------------------------------------------
                                                                                  

consensus_9994#0      CTCCGTGCAACCCTTCACTCAACAGAGGAGCGACTCCAATCTCATAAAAAGGAAACCAAC 1260
consensus_9994#1      ------------------------------------------------------------
                                                                                  

consensus_9994#0      TATCTAGCACAAGTAGCAGCAAAATCTTTACCAAAAGGACTTCATTGCCTTCCGCTGCGG 1320
consensus_9994#1      ------------------------------------------------------------
                                                                                  

consensus_9994#0      CTTACAAATGAGTACTACTACACCAACTCCAACAATAAAAAATTCCCACATATAGAAAAG 1380
consensus_9994#1      ------------------------------------------------------------
                                                                                  

consensus_9994#0      TTGGAAGATCCAAAACTCTATCACTATGCGTTGTTCTCAGATAATGTGTTGGCTGCTGCA 1440
consensus_9994#1      ------------------------------------------------------------
                                                                                  

consensus_9994#0      GTGGTTGTAAACTCCACTATTATTCATGCTAAGAAACCAGCAGATCATGTCTTCCACATT 1500
consensus_9994#1      ------------------------------------------------------------
                                                                                  

consensus_9994#0      GTCACGGATAGGCTTAACTATGCTGCAATGAAGATGTGGTTCTTGGCTAATCCCTTGGGT 1560
consensus_9994#1      ------------------------------------------------------------
                                                                                  

consensus_9994#0      GAAGCAGCCATTCAGGTTCAAAACATTGAAGAGTTTACATGGCTGAATTCTACCTACAGT 1620
consensus_9994#1      ------------------------------------------------------------
                                                                                  

consensus_9994#0      CCAGTTATGAAGCAGCTAGAATCACAGTCTATGATTGATTACTACTTCAAGAGTGGGCAG 1680
consensus_9994#1      ------------------------------------------------------------
                                                                                  

consensus_9994#0      GCCAGGCGTGATGAAAATCCCAAGTTCCGGAACCCCAAGTACTTGTCAATGCTCAATCAT 1740
consensus_9994#1      ------------------------------------------------------------
                                                                                  

consensus_9994#0      CTGAGGTTTTATCTCCCTGAAATCTTCCCGAAGCTTAGCAAGGTGTTATTCCTGGATGAT 1800
consensus_9994#1      ------------------------------------------------------------
                                                                                  

consensus_9994#0      GACACTGTAGTACAGCAGGACTTAAGTGCGATTTGGTCCATTGATCTAAAAGGCAAGGTT 1860
consensus_9994#1      ------------------------------------------------------------
                                                                                  

consensus_9994#0      AATGGTGCTGTTGAGACCTGTGGAGAGACCTTTCATAGGTTTGATAAGTACCTCAACTTC 1920
consensus_9994#1      ------------------------------------------------------------
                                                                                  

consensus_9994#0      TCAAATCCTCTTATTGCCAGCAATTTTGACCCGCGTGCCTGCGGTTGGGCGTATGGCATG 1980
consensus_9994#1      ------------------------------------------------------------
                                                                                  

consensus_9994#0      AATGTGTTCGATCTATCTGAGTGGAGAAGACAAAAGATTACTGACGTCTACCACAATTGG 2040
consensus_9994#1      ------------------------------------------------------------
                                                                                  

consensus_9994#0      CAAAGACTGAACGAAAATAGGATATTGTGGAAGCTAGGTACTCTTCCTGCTGGTCTCGTA 2100
consensus_9994#1      ------------------------------------------------------------
                                                                                  

consensus_9994#0      ACATTTTGGAACCGTACCTTCCCTCTTCATCACTCCTGGCATCAGTTGGGACTTGGGTAC 2160
consensus_9994#1      ------------------------------------------------------------
                                                                                  

consensus_9994#0      AACCCAAACATCAATGAGAAGGATATCCGGAGGGCATCTGTCATACACTACAATGGTAAT 2220
consensus_9994#1      -----------------------------------------------------------T 1
                                                                                 *

consensus_9994#0      CTGAAACCCTGGCTTGAGATTGGATTGTCCAGATATCGCAAATACTGGTCAAAATACGTC 2280
consensus_9994#1      CTGAACCCNTGGCTTGAGATTGGATTGTCCAAATATCGCAAANACTGGTCAAAATACGTC 61
                      ***** ** ********************** ********** *****************

consensus_9994#0      GATTTCGATCAAGTCTTCCTACGGGACTGCAATATAAATCCCTGAATGACAGAGTGTTGT 2340
consensus_9994#1      GATTTCGATCAAGTCTTCCTACGGGACTGCAATATAAATCCCTGAATGACAGAGTGTTGT 121
                      ************************************************************

consensus_9994#0      ATTATCCAATTATTTTCTTTTCACCTGGTAGATTAATTCTTTACGCTCTAGGTTTTATTT 2400
consensus_9994#1      ATTATCCAATTATTTTCTTTTCACCTGGTAGATTAATTCTTTACGCTCTAGGTTTTATTT 181
                      ************************************************************

consensus_9994#0      AAGCTGTCTAGAGCGATATTCTTTTATCTGGGCTCTTCTCTCTTGTAAAGGTTCCAGCAA 2460
consensus_9994#1      AAGCTGTCTAGAGCGATATTCTTTTATCTGGGCTCTTCTCTCTTGTAAAGGTTCCAGCAA 241
                      ************************************************************

consensus_9994#0      GTTAGTGGTAGGCTTTAGATCAGAGACATGTTCAATCACAGATCACGAAAGCTGCATCAC 2520
consensus_9994#1      GTTAGTGGTAGGCTTTAGATCAGAGACATGTTCAATCNCAGATCACGAAAGCTGCATCAC 301
                      ************************************* **********************

consensus_9994#0      ATTTTGTAGTCACTAATGTTAATATAGTAAATTATTTGATTGTATTATTCCTATGGAAGA 2580
consensus_9994#1      ATTTTGTAGTCACTAATGTTAATATAGTAAATTATTTGATTGTATTATTCCTAAAAAAAA 361
                      *****************************************************   ** *

consensus_9994#0      GTATTTAGGAGTACCTTTATTAAAAA 2606
consensus_9994#1      AAAAAAAAA----------------- 370
                        *   *                   




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)