These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10025#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1029 fasta sequence [CAATGCAGCCGCTGCGGCTTCTGCCTGTAAACGAACTTGAGTTTGTGTCATGGGCATGTTAATAATATTAGTGCCAACAGTAGAATGTTGGTTAGTATCAATAGGGGACGTATGACGATGCAATATAGGAACACCAGGAGGTCGAATTTGTCGAGATTGGGGTGGTGATGATGGTTGAGGTGGAAGGCGGTTAGTAGATGTACGAGAAGGTGCAGCATTTGCAAGTGAGCTGATACCTACAGGCGCAGCCTTCATTCGTGGCGCTAATGTTAAACGAACACCAGGTCGATTTGGTGGAAGTTCACCAGCAGCGCCACCAGTTGCAGCTGACTGAGTAGAATTTACAACATTGTTTGAAAGAGTATCAGTATTACTGGGACGATATAATTCTTCAGGTTCAATATGTTGTTTTTCTATAACAATTGGACAGTTTTGATTATTATTAATGGTACTAGTTTGACTGTTGGGCATATCATTTCTTGCATTTTCTGGATGATTGACAGATTTTGGAGCCCAATTAGTCAAAGTAGATGGTTTAGTTGCATCATCTGCAAATGGACTACGACTTTTTTTTCTGCGTAATGGTGATGCAACACCACCTCGTCTATTCCGTACATGTGGTGGGCCAGGAATTACATCAGGTAAACGTTCATGACGATGAACAGTAACATCACGACCATTTTCACCTCCAGAAGATGGACTGCGAGACCAGGAAGTAATGTATCGTTTTTCTTCAGTATCTTTAACACCAGAAGGACTTGGTGATTTTGAAGATGAATGAGAACGCTCTTTAGTGTGTCCATCACCTTTCGACACATTCTGTGCTGTAGTAGCAAGGGATGGTGCTATAGCCCAAGGCCTCTTTACTGGTCTTTCATTCGGGAGCGGTGGAACATCAGTGCGTCGTCTAGGTGGTGAAGTAACAGGTGATTTCGATCGTCGACCAGTTTTATTCTTCGAATCTCCTCCGCGTCCTCCAGGACCTCTGAACCATGTTTGAGGACCACCGCTCGTACGACCACGAGATCC] [+] EMBL CD200164 [CAATGCAGCCGCTGCGGCTTCTGCCTGTAAACGAACTTGAGTTTGTGTCATGGGCATGTTAATAATATTAGTGCCAACAGTAGAATGTTGGTTAGTATCAATAGGGGACGTATGACGATGCAATATAGGAACACCAGGAGGTCGAATTTGTCGAGATTGGGGTGGTGATGATGGTTGAGGTGGAAGGCGGTTAGT ] [+] EMBL CD200104 [CAATGCATTCGCCGCGGCTTCTGCCTGTAAACGAACTTGAGTTTGTGTCATGGGCATGTTAATAATATTAGTGCCAACAGTAGAATGTTGATTAGTATCAATAGGGGACGTATGACGATGCAATATAGGAACACCAGGAGGTCGAATTTGTCGAGATTGGGGTGGTGATGATGGTTGAGGTGGAAGGCGGCTAGTACATGTACGAtatttttc ] [+] EMBL CD115640 [ AGTGCCAACAGTAGAATGTTGGTTAGTATCAATAGGGGACGTATGACGATGCAATATAGGAACACCAGGAGGTCGAATTTGTCGAGATTGGGGTGGTGATGATGGTTGAGGTGGAAGGCGGTTAGTAGATGTACGAGAAGGTGCAGCATTTGCAAGTGAGCTGATACCTACAGGCGCAGCCTTCATTCGTGGCGCTAATGTTAAACGAACACCAGGTCGATTTGGTGGAAGTTCACCAGCAGCGCCACCAGTTGCAGCTGACTGAGTAGAATTTACAACATTGTTTGAAAGAGTATCAGTATTACTGGGACGATATAACTCTTCAGGTTCAATATGTTGgt ] [-] EMBL CD162776 [ TTGTCGAGATTGGGGTGGTGATGATGGTTGAGGTGGAAGGCGGTTAGTAGATGTACGAGAAGGTGCAGCATTTGCAAGTGAGCTGATACCTACAGGCGCAGCCTTCATTCGTGGCGCTAATGTTAAACGAACACCAGGTCGATTTGGTGGAAGTTCACCAGCAGCGCCACCAGTTGCAGCTGACTGAGTAGAATTTACAACATTGTTTGAAAGAGTATCAGTATTACTGGGACGATATAATTCTTCAGGTTCAATATGTTGTTTTTCTATAACAATTGGACAGTTTTGATTATTATTAATGGTACTAGTTTGACTGTTGGGCATATCATTTCTTGCATTTTCTGGATGATTGACAGATTTTGGAGCCCA ] [-] EMBL CD163072 [ TTGTCGAGATTGGGGTGGTGATGATGGTTGAGGTGGAAGGCGGTTAGTAGATGTACGAGAAGGTGCAGCATTTGCAAGTGAGCTGATACCTACAGGCGCAGCCTTCATTCGTGGCGCTAATGTTAAACGAACACCAGGTCGATTTGGTGGAAGTTCACCAGCAGCGCCACCAGTTGCAGCTGACTGAGTAGAATTTACAACATTGTTTGAAAGAGTATCAGTATTACTGGGACGATATAATTCTTCAGGTTCAATATGTTGTTTTTCTATAACAATTGGACAGTTTTGATTATTATTAATGGTACTAGTTTGACTGTTGGGCATATCATTTCTTGCATTTTCTGGATGATTGACAGATTTTGGAGCCCA ] [+] EMBL CD146956 [ TGTCGAGATTGGGGTGGTGATGATGGTTGAGGTGGAAGGCGGTTAGTAGATGTACGAGAAGGTGCAGCATTTGCAAGTGAGCTGATACCTACAGGCGCAGCCTTCATTCGTGGCGCTAATGTTAAACGAACACCAGGTCGATTTGGTGGAAGTTCACCAGCAGCGCCACCAGTTGCAGCTGACTGAGTAGAATTTACAACATTGTTTGAAAGAGTATCAGTATTACTGGGACGATATAATTCTTCAGGTTCAATATGTTGTTTTTCTATAACAATTGGACAGTTTTGATTATTATTAATGGTACTAGTTTGACTGTTGGGCATATCATTTCTTGCATTTTCTGGATGATTGACAGATTTTGGAGCCCAATTAGTCAAAGTAGATGGTTTAGTTGCATCATCTGCAAATGGACTACGACTTTTTTTTCTGCGTAATGGTGATGCAACACCACCTCGTCTATTCCGTACATGTGGTGGGCCAGGAATTACAACAGGTAAACGTTCATGACGATGAACAGTAACATCACGACCATTTTCACCTCCAGAAGATGGACTGCGAGACCAGGAAGTAATGTATCGTTTTTCTTCAGTATCTTTAACACCAGAAGGACTTGGTGATTTTGA ] [+] EMBL CD155688 [ GTCGAGATTGGGGTGGTGATGATGGTTGAGGTGGAAGGCGGTTAGTAGATGTACGAGAAGGTGCAGCATTTGCAAGTGAGCTGATACCTACAGGCGCAGCCTTCATTCGTGGCGCTAATGTTAAACGAACACCAGGTCGATTTGGTGGAAGTTCACCAGCAGCGCCACCAGTTGCAGCTGACTGAGTAGAATTTACAACATTGTTTGAAAGAGTATCAGTATTACTGGGACGATATAATTCTTCAGGTTCAATATGTTGTTTTTCTATAACAATTGGACAGTTTTGATTATTATTAATGGTACCAGTTTGACTGTTGGGCATATCATTTCTTGCATTTTC ] [-] EMBL CD117155 [ GAGATTGGGGTGGTGATGATGGTTGAGGTGGAAGGCGGTTAGTAGATGTACGAGAAGGCGCAGCATTTGCAAGTGAGCTGATACCTACAGGCGCAGCCTTCATTCGTGGCGCTAATGTTAAACGAACACCAGGTCGATTTGGTGGAAGTTCACCAGCAGCGCCACCAGTTGCAGCTGACTGAGTAGAATTTACAACATTGTTTGAAAGAGTATCAGTATTACTGGGACGATATAATTCTTCAGGTTCAATATGTTGTTT ] [+] EMBL CD121507 [ GTTGTTTTTCTATAACAATTGGACAGTTTTGATTATTATTAATGGTACTAGTTTGACTGTTGGGCATATCATTTCTTGCATTTTCTGGATGATTGACAGATTTTGGAGCCCAATTAGTCAAAGTAGATGGTTTAGTTGCATCATCTGCAAATGGACTACGACTTTTTTTT TGCGTAATGGTGATGCAACACCACCTCGTCTATTCCGTACATGTGGTGGGCCAGGAATTACATCAGGTAAACGTTCGTGACGATGAACAGTAACATCACGACCATTTTCACCTCCAGAAGATGGACTGCGAGACCAGGAAGTAATGTATCGTTTTTCTTCAGTATCTTTAACACCAGAAGGACTTGGTGATTTTGAAGATGAATGAGAACGCTCTTTAGTG ] [-] EMBL CD165839 [ TGGACAGTTTTGATTATTATTAATGGTACTAGTTTGACTGTTGGGCATATCATTTCTTGCATTTTCTGGATGATTGACAGATTTTGGAGCCCAATTAGTCAAAGTAGATGGTTTAGTTGCATCATCTGCAAATGGACTACGACTTTTTTTTCTGCGTAATGGTGATGCAACACCACCTCGTCTATTCCGTACATGTGGTGGGCCAGGGATTACATCAGGTAAACGTTCATGACGATGAACAGTAACATCACGACCATTTTCACCTCCAGAAGATGGACTGCGAGACCAGGAAGTAATGTATCGTTTTTCTTCAGTATCTTTAACACCAGAAGGACTTGGTGATTTTGAAGATGAATGAGAACGCTCTTTAGTGTGTCCATCACCTTTCGACACATTCTGTGCTGTAGTAGCAAGGGATGGTGCTATAGCCCAAGGCCTCTTTACTGGTCTTT ] [-] EMBL CD114416 [ TGTTGGGCATATCATTTCTTGCATTTTCGGGATGATTGACAGATTTTGGAGCCCAATTAGTCAAAGTAGATGGTTTAGTTGCATCATCTGCAAATGGACTACGACTTTTTTTTCTGCGTAATGGTGATGCAACACCACCTCGTCTATTCCGTACATGTGGTGGGCCAGGAATTACATCCGGTAAACGTTCATGACGATGAACAGTAACATCACGACCATTTTCACCTCCAGAAGATGGACTGCGAGACCAGGAAGTAATGTATCGTTTTTCTTCAGTATCTTTAACACCAGAAGGACTTGGTGATTTTGAAGATGAATGAGAACGCTCTTTAGTGTGTCCATCACCTTTCGACACATTCTGTGCTGTAGTAGCAAGGGATGGTGCTATAGCCCAAGGCCTCTTTACTGGTCTTTCATTCGGGAGCGGTGGAACATCAGTGCGTCGTCTAGGTGGTGAAGTAACAGGTGATTTCGATCGTCGACCAGTTTTATTCTTCGAATCTCCTCCGCGTCCTCCAGGACCTCTGAACCATGTTTGAGG ] [+] EMBL CD066771 [ GGTAAACGTTCATGACGATGAACAGTAACATCACGACCATTTTCACCTCCAGAAGATGGACTGCGAGACCAGGAAGTAATGTATCGTTTTTCTTCAGTATCTTTAACACCAGAAGGACTTGGTGATTTTGAAGATGAATGAGAACGCTCTTTAGTGTGTCCATCACCTTTCGACACATTCTGTGCTGTAGTAGCAAGGGATGGTGCTATAGCCCAAGGCCTCTTTACTGGTCTTTCATTCGGGAGCGGTGGAACATCAGTGCGTCGTCTAGGTGGTGAAGTAACAGGTGATTTCGATCGTCGACCAGTTTTATTCTTCGAATCTCCTCCGCGTCCTCCAGGACCTCTGAACCATGTTTGATTACCACCGCTCGTACGACCACGAGATCC] [+] EMBL CD066890 [ GGTAAACGTTCATGACGATGAACAGTAACATCACGACCATTTTCACCTCCAGAAGATGGACTGCGAGACCAGGAAGTAATGTATCGTTTTTCTTCAGTATCTTTAACACCAGAAGGACTTGGTGATTTTGAAGATGAATGAGAACGCTCTTTAGTGTGTCCATCACCTTTCGATACATACTGTGCTGTAGTAGCAAGGGATGGTGCTATAGCCCAAGGCCTCTTTACTGGTCTTTCATTCGGGAGCGGTGGAACATCAGTGCGTCGTCTAGGTG ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||