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Schistosoma mansoni
cluster # 10029 cluster # 10029       Sequences # 13       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10029#0 length = 1203 sequences # 9  
consensus_10029#1 length = 1172 sequences # 4  

consensusID : consensus_10029#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1203
fasta sequence
                              [GTTTATGGCATTCTTCAAATCCCTGAAGGATCCTG-G-ATGTGTCGACAGTGTGAG-GCGGGTGTCAAATCAACCACCCCCTGCAGCTTATGTCCGAACACTGGTGGGGCTATGAAACTTTCAGATGACGGACAACGCTGGTGCCATGTAAGCTGTGCCTTGTGGGTTCCAGAAGTTGGGTTTGGTGACGTCGAAATGATGGAGCCCATTATAAAACTAGACAATATACCACAAGCTAGACGAAACCTTTTGTGTTCAATATGTCGTTCACGCTATGGTGCTCCTGTACAGTGTTCTAGTGTTAAGTGTAAGACAGCATTCCATGTCACATGCGCGTTCCAAAGCAACCTCGTCATGCGCCAAGAGCTTGTCGACAAGGATGTGCGCTTAATAGGGTTGTGTTGGAAGCATTCC-CGAAAAGAGCAACAGTCAGCAACTCACCATTCTTCTGCTAGCTGTGATTCAAATTCCTTTCGCTCTCCGAATTCTCCTATCAAGGTACATGATGCAAATCAAAACTTCGGGAGTGGAATGCAACCAGTAGCCTTAACGCGTAAACAAAGACTCCTTGAACTGGAGTGTAATTTTCATAATTTGGTGCAAGAGTCCCACTTGAATATCTGGTTGGATAATGACTCCATGAAAATGCACTTGGGAAATTCAGCTTTTCTAAATGAAGGTGAACATAGACACGTTCCTAATGACTTTCGTGCAGCCATTTTCGTTTACTGGCGTTTAAAAAGGCGGGCAAACTTTAACCAACCACTAGTCAATCCAGCTCCATTAACTTGGAAAGAAAGTGCTGATCAAGTAGCTGCCACGACCAAGGAAGAACTAGCCCGAGTAGAACGCGCTAATTCTGATATGAAAGCATTTGAGTCATTCAAACGTATTAGATTCGGTCTTGACAGGGCTAGATTAATGGCAGATATGGTCTTGCAAAGAG-AACGACGGAAATTAGCTCTGTTTAAGAGAATGTGGCGTATATCTGAAATCCAATTGTCTGCTCTTGAAAAACAAAACAGTCTAATATCTAGTGAATTACTCCGGACTGCTCATATCGGTGAATCTGTTTATGATAATTGGGAATTGTTTTTAGCTTATAATAATCCTTCGCGTCAGCGTGTTGATCAGGGTAAAAATATGTCCCACATTAGTGAATCAAATAACGAGTCGAAGTCTCACCTGTTTATACTGTTAATGAAA]

[+] EMBL CD140850             [GTTATTGGCATTCTTCATATCCCTGATGGATCCTGAGTATGTGTCGACAGTGTGAGTGCGGGTGTCAAATCAACCACCCCCTGCAGCTTATGTCCGAACACTGGTGGGGCTATGAAACTTTCAGATGACGGACAACGCTGGTGCCATGTAAGCTGTGCCTTGTGGG TCCAGAAGTTGGGTTTGGTGACGTCGAAATGATGGAGCCCATTATAAAACTAGACAATATACCACAAGCTAGACGAAACCTTTTGTGTTCAATATGTCGTTCACGCTATGGTGCTCCTGTACAGTGTTCTAGTGTTAAGTGTAAGACAGCATTCCATGTCACATGCGCGTTCCAAAGCAACCTCGTCATGCGCCAAGAGCTTGTCGACAAGGATGTGCGCTTAATAGGGTTGTGTTGGAAGCATTCC CGAAAAGAGCAACAGTCAGCAACTCACCATTCTTCTGCTAGCTGTGATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD140845             [   TATGGCATTCTTCAAATCCCTGAAGGATCCTG G ATGTGTCGACAGTGTGAG GCGGGTGTCAAATCAACCACTCCCTGCAGCTTATGTCCGAACACTGGTGGGGCTATGAAACTTTCAGATGACGGACAACGCTGGTGCCATGTAAGCTGTGCCTTGTGGGTTCCAGAAGTTGGGTTTGGTGACGTCGAAATGATGGAGCCCATTATAAAACTAGACAATATACCACAAGCTAGACGAAACCTTTTGTGTTCAATATGTCGTTCACGCTATGGTGCTCCTGTACAGTGTTCTAGTGTTAAGTGTAAGACAGCATTCCATGTCACATGCGCGTTCCAAAGCAACCTCGTCATGCGCCAAGAGCTTGTCGACAAGGATGTGCGCTTAATAGGGTTGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD140779             [   TATGGCATTCTTCAAATCCCTGAAGGATCCTG G ATGTGTCGACAGTGTGAG GCGGGTGTCAAATCAACCACCCCCTGCAGCTTATGTCCGAACACTGGTGGGGCTATGAAACTTTCAGATGACGGACAACGCTGGTGCCATGTAAGCTGTGCCTTGTGGGTTCCAGAAGTTGGGTTTGGTGACGTCGAAATGATGGAGCCCATTATAAAACTAGACAATATACCACAAGCTAGACGAAACCTTTTGTGTTCAATATGTCGTTCACGCTATGGTGCTCCTGTACAGTGTTCTAGTGTTAAGTGTAAGACAGCATTCCATGTCACATGCGCGTTCCAAAGCAACCTCGTCATGCGCCAAGAGCTTGTCGACAAGGATGTGCGCTTAATAGGGTTGTGTTGGAAGCATTCC CGAAAAGAGCAACAGTCAGCAACTCACCATTCTTCTGCTAGCTGTGATTCAAATTCCTTTCGCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD180907             [                                                                                                                                       CGCTGGTGCCATGTAAGCTGTGCCTTGTGGGTTCCAGAAGTTGGGTTTGGTGACGTCGAAATGATGGAGCCCATTATAAAACTAGACAATATACCACAAGCTAGACGAAACCTTTTGTGTTCAATATGTCGTTCACGCTATGGTGCTCCTGTACAGTGTTCTAGTGTTAAGTGTAAGACAGCATTCCATGTCACATGCGCGTTCCAAAGCAACCTCGTCATGCGCCAAGAGCTTGTCGACAAGGATGTGCGCTTAATAGGGTTGTGTTGGAAGCATTCC CGAAAAGAGCAACAGTCAGCAACTCACCATTCTTCTGCTAGTTGTGATTCAAATTCCTTTCGCGCTCCGAATTCTCCTATCAAGGTACATGATGCAAATCAAAACTTCGGGAGTGGAATGCAACCAGTAGCCTTAACGCGTAAACAAAGACTCCTTGAACTGGAGTGTAATTTTCATAATTTGGTGCAAGAGTCCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD140805             [                                                                                                                                                                                                             CCATTATAAAACTAGACAATATACCACAAGTTAGACGAAACCTTTAGTGTTCAATATGTCGTTCACGCTATGGTGCTCCTGTACAGTGTTCTAGTGTTAAGTGTAAGACAGCATTCCATGTCACATGCGCGTTCCAAAGCAACCTCGTCATGCGCCAAGAGCTTGTCGACAAGGATGTGCGCTTAATAGGGTTGTGTTGGAAGCATTCC CGAAAAGAGCAACAGTCAGCAACTCACCATTCTTCTGCTAGCTGTGATTCAAATTCCTTTCGCTCTCCGAATTCTCCTATCAAGGTACATGATGCAAATCAAAACTTCGGGAGTGGAATGCAACCAGTAGCCTTAACGCGTAAACAAAGACTCCTTGAACTGGAGTGTAATTTTCATAATTTGGTGCAAGAGTCCCACTTGAATATCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD091754             [                                                                                                                                                                                                                                                                                                                                                                                                                        CATTCCNCGAAAAGAGCAACAGTCAGCAACTCACCATTCTTCTGCTAGTTGTGATTCAAATTCCTTTCGCGCTCTGATTTCTCCTATCAAGGTACATGATGCAAATCAAAACTTCGGGAGTGGAATGCAACCAGTAGCCTTAACGCGTAAACAAAGACTCCTTGAACTGGAGTGTAATTCTCATAATTTGGTGCAAGAGTCCCACTTGAATATCTGGTTGGATAATGACTCCATGAAAATGCACTTGGGAAATTCAGCTTTTCTAAATGAAGGTGAACATAGACACGTTCCTAATGACTTTCGTGCAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD067127             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TGGAATGCAACCAGTAGCCTTAACGCGTTAACAAAGACTCCTTGAACTGGAGTGTAATTTTCATAATTTGGTGCAAGAGTTCCACTTGAATATCTGGTTGGATAATGACTCCATGAAAATGCACTTGGGAAATTCACCTTTTCTAAATGAATGTGAACATATACACGTTCCTAATGACATTCGGGCGGCCATTTTCGTTTACTGGCGTTTAAAAAGGCGGGCAAACTTTAACCAACCACTAGTCAATCCAGCTCCATTAACTTGGAAAGAAAGTGCCGATCAAGTAGCTGCCACGACCAA                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AI975056             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AAGGCGGGCAAACTTTAACCAACCACTAGTCAATCCAGCTCCATTAACTTGGAAAGAAAGTGCTGATCAAGTAGCTGCCACGACCAAGGAAGAACTAGCCCGAGTAGAACGCGCTAATTCTGATATGAAAGCATTTGAGTCATTCAAACGTATTAGATTCGGTCTTGACAGGGCTAGATTAATGGCAGATATGGTCTTGCAAAGAG AACGACGGAAATTAGCTCTGTTTAAGAGAATGTGGCGTATATCTGAAATCCAATTGTCTGCTCTTGAAAAACAAAACAGTCTAATATCTAGTGAATTACTCCGGACTGCTCATATCGGTGAATCTGTTTATGATAATTGGGAATTGTTTTTAGCTTATAATAATCCTTCGCGTCAGCGTGTTGATCAGGGTAAAAATATGTCCCACATTAGTGAATCAAATAACGAGTCGAAGTCTCACCTGTTTATACTGTTAATGAAA]
[+] EMBL CD077925             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   gaggcacACCACTAGTCAATCCAGCTCCATTAACTTGGAAAGAAAGTGCTGATCAAGTAGCTGCCACGACCAAGGAAGAACTAGCCCGAGTAGAACGCGCTAATTCTGATATGAAAGCATTTGAGTCATTCAAACGTATTAGATTCGGTCTTGACAGGGCTAGATTAATGGCAGATATGGTCTTGCAAAGAGAAACGACGG AATTAGCTNTGTTTAAGAGAATGTGGCGTATATCTGAAATC                                                                                                                                                                                                                  ]


>consensus_10029#0 GTTTATGGCATTCTTCAAATCCCTGAAGGATCCTGGATGTGTCGACAGTGTGAGGCGGGT GTCAAATCAACCACCCCCTGCAGCTTATGTCCGAACACTGGTGGGGCTATGAAACTTTCA GATGACGGACAACGCTGGTGCCATGTAAGCTGTGCCTTGTGGGTTCCAGAAGTTGGGTTT GGTGACGTCGAAATGATGGAGCCCATTATAAAACTAGACAATATACCACAAGCTAGACGA AACCTTTTGTGTTCAATATGTCGTTCACGCTATGGTGCTCCTGTACAGTGTTCTAGTGTT AAGTGTAAGACAGCATTCCATGTCACATGCGCGTTCCAAAGCAACCTCGTCATGCGCCAA GAGCTTGTCGACAAGGATGTGCGCTTAATAGGGTTGTGTTGGAAGCATTCCCGAAAAGAG CAACAGTCAGCAACTCACCATTCTTCTGCTAGCTGTGATTCAAATTCCTTTCGCTCTCCG AATTCTCCTATCAAGGTACATGATGCAAATCAAAACTTCGGGAGTGGAATGCAACCAGTA GCCTTAACGCGTAAACAAAGACTCCTTGAACTGGAGTGTAATTTTCATAATTTGGTGCAA GAGTCCCACTTGAATATCTGGTTGGATAATGACTCCATGAAAATGCACTTGGGAAATTCA GCTTTTCTAAATGAAGGTGAACATAGACACGTTCCTAATGACTTTCGTGCAGCCATTTTC GTTTACTGGCGTTTAAAAAGGCGGGCAAACTTTAACCAACCACTAGTCAATCCAGCTCCA TTAACTTGGAAAGAAAGTGCTGATCAAGTAGCTGCCACGACCAAGGAAGAACTAGCCCGA GTAGAACGCGCTAATTCTGATATGAAAGCATTTGAGTCATTCAAACGTATTAGATTCGGT CTTGACAGGGCTAGATTAATGGCAGATATGGTCTTGCAAAGAGAACGACGGAAATTAGCT CTGTTTAAGAGAATGTGGCGTATATCTGAAATCCAATTGTCTGCTCTTGAAAAACAAAAC AGTCTAATATCTAGTGAATTACTCCGGACTGCTCATATCGGTGAATCTGTTTATGATAAT TGGGAATTGTTTTTAGCTTATAATAATCCTTCGCGTCAGCGTGTTGATCAGGGTAAAAAT ATGTCCCACATTAGTGAATCAAATAACGAGTCGAAGTCTCACCTGTTTATACTGTTAATG AAA



consensusID : consensus_10029#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1172
fasta sequence
                              [AGGCCAANATTCGGCACGAGGCTTGTTTAAGAGAATGTGGCGTATATCTGAAATCCAATTGTCTGCTCTTGAAAAACAAAACAGTCTAATATCTAGTGAATTACTCCGGACTGCTCATATCGGTGAATCTGTTTATGATAATTGGGAATTGTTTTTAGCTTATAATAATCCTTCGCGTCAGCGTGTTGATCAGGGTAAAAATATGTCCCACATTAGTGAATCAAATAACGAGTCGAAGTCTTCACCTGTTTATACTGTTAATGAAAACAACTCTAGTTTTTCGCAGACTTCTATGCCTAATGCAACTATAAAAGTAAACGAAAGCATCGATTCATTCAATATTAGTGCTATTCCTAAAGAATGTCTCATTGTTTCCGATACAATTAAACAGAGACTTCGTTCTGCGTTAACATTAGTCGCGGAAAATTGTAATATGTGGAGAGCAGACAAACATGTAGAAAGTCCCAATCATAAGCGTAAAACGAACAATCATTATATCAAATCACATAAGTCTCTTTCACTTAATCGATTTGAACGTTCACCCCTC-AGATCTCATTGTTCTTCACCATTAACTTCATCAACTAAAATAAATAAGCCATCAGAAAATGATATGCCTATTGTTCAAGTGAAATTATCGCCAATTTCAGATAAAGCATCATTTAATTATGTTAAAAATGTAAATAGTAGTAATAATAATGAATGTACACCTACAAGAAAACGTAAACACTTGAATAGTTCTAACTCAGTATTCGAACAATCACCACCTAGTCATTCTATTCCTGTTCTTACTAAATTAGCAATGATTACTTTATCACCTGGAGCTGCTAAATTTCTATGAGCCTTTCTTTCACACAAGATTTTAGCTATATAATTTCTCTGATCTTGTATATATAATATACTGTATAATTGTATTATATGGTTAGAACTTATCATTGAACATATCTCTTTTATATCCTGTACATAATTTTGTTTACTTTCTCAGATAATTTATTTTCTGTTAAATTGGTTTTATTACTTCACGATAACACTATGTATGGCGATCTATTCTGTAATCCTTTCAACATATTGTTATCGTGTTAATATTTTATTTTTTTGCTTTCTATGTATTGTTTCTGAGATATTTTGTTACACATGTTTCTTCATGTATTCGATACTTGCAAAAACAAAGAGTT]

[+] EMBL CD083223             [AGGCCAANATTCGGCACGAGGCTTGTTTAAGAGAATGTGGCGTATATCTGAAATCCAATTGTCTGCTCTTGAAAAACAAAACAGTCTAATATCTAGTGAATTACTCCGGACTGCTCATATCGGTGAATCTGTTTATGATAATTGGGAATTGTTTTTAGCTTATAATAATCCTTCGCGTCAGCGTGTTGATCAGGGTAAAAATATGTCCCACATTAGTGAATCAAATAACGAGTCGAAGTCTTCACCTGTTTATACTGTTAATGAAAACAACTCTAGTTTTTCGCAGACTTCTATGCCTAATGCAACTATAAAAGTAAACGAAAGCATCGATTCATTCAATATTAGTGCTATTCCTAAAGAATGTCTCATTGTTTCCGATACAATTAAACAGAGACTTCGTTCTGCGTTAACATTAGTCGCGGAAAATTGTAATATGTGGAGAGCAGACAAACATGTAGAAAGTCCCAATCATAAGCGTAAAACGAACAATCATTATATCAAATCACATAAGTCTCTTTCACTTAATCGATTTGAACGTTCACCCCTC AGATCTCATTGTTCTTCACCATnnt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD067234             [                                                                                                                                                                                                                                                                                                                                                                                                                                            GTAATATGTGGAGAGCAGACAAACATGTAGAAAGTCCCAATCATAAGCGTAAAACGAACAATCATCATATCAAATCACATAAGTCTCTTTCACTTAATCGATTTGAGCGTTCA CCCTCAAGATCTCATTGTTCTTCACCATTAACTTCATCAACTAAAATAAATAAGCCATCAGAAAATGATATGCCTATTGTTCAAGTGAAATTATCGCCAATTTCAGATAAAGCATCATTTAATTATGTTAAAAATGTAAATAGTAGTAATAATAATGAATGTACACCTACAAGAAAACGTAAACACTTGAATAGTTCTAACTCAGTATTCGAACAATCACCACCTAG                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD066306             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ATCTCATTGTTCTTCACCATTAACTTCATCAACTAAAATAAATAAGCCATCAGAAAATGATATGCCTATTGTTCAAGTGAAATTATCGCCAATTTCAGATAAAGCATCATTTAATTATGTTAAAAATGTAAATAGTAGTAATAATAATGAATGTACACCTACAAGAAAACGTAAACACTTGAATAGTTCTAACTCAGTATTCGAACAATCACCACCTAGTCA                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD076794             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AAACACTTGAATAGTTCTAACTCAGTATTCGAACAATCACCACCTAGTCATTCTATTCCTGTTCTTACTAAATTAGCAATGATTACTTTATCACCTGGAGCTGCTAAATTTCTATGAGCCTTTCTTTCACACAAGATTTTAGCTATATAATTTCTCTGATCTTGTATATATAATATACTGTATAATTGTATTATATGGTTAGAACTTATCATTGAACATATCTCTTTTATATCCTGTACATAATTTTGTTTACTTTCTCAGATAATTTATTTTCTGTTAAATTGGTTTTATTACTTCACGATAACACTATGTATGGCGATCTATTCTGTAATCCTTTCAACATATTGTTATCGTGTTAATATTTTATTTTTTTGCTTTCTATGTATTGTTTCTGAGATATTTTGTTACACATGTTTCTTCATGTATTCGATACTTGCAAAAACAAAGAGTT]


>consensus_10029#1 AGGCCAANATTCGGCACGAGGCTTGTTTAAGAGAATGTGGCGTATATCTGAAATCCAATT GTCTGCTCTTGAAAAACAAAACAGTCTAATATCTAGTGAATTACTCCGGACTGCTCATAT CGGTGAATCTGTTTATGATAATTGGGAATTGTTTTTAGCTTATAATAATCCTTCGCGTCA GCGTGTTGATCAGGGTAAAAATATGTCCCACATTAGTGAATCAAATAACGAGTCGAAGTC TTCACCTGTTTATACTGTTAATGAAAACAACTCTAGTTTTTCGCAGACTTCTATGCCTAA TGCAACTATAAAAGTAAACGAAAGCATCGATTCATTCAATATTAGTGCTATTCCTAAAGA ATGTCTCATTGTTTCCGATACAATTAAACAGAGACTTCGTTCTGCGTTAACATTAGTCGC GGAAAATTGTAATATGTGGAGAGCAGACAAACATGTAGAAAGTCCCAATCATAAGCGTAA AACGAACAATCATTATATCAAATCACATAAGTCTCTTTCACTTAATCGATTTGAACGTTC ACCCCTCAGATCTCATTGTTCTTCACCATTAACTTCATCAACTAAAATAAATAAGCCATC AGAAAATGATATGCCTATTGTTCAAGTGAAATTATCGCCAATTTCAGATAAAGCATCATT TAATTATGTTAAAAATGTAAATAGTAGTAATAATAATGAATGTACACCTACAAGAAAACG TAAACACTTGAATAGTTCTAACTCAGTATTCGAACAATCACCACCTAGTCATTCTATTCC TGTTCTTACTAAATTAGCAATGATTACTTTATCACCTGGAGCTGCTAAATTTCTATGAGC CTTTCTTTCACACAAGATTTTAGCTATATAATTTCTCTGATCTTGTATATATAATATACT GTATAATTGTATTATATGGTTAGAACTTATCATTGAACATATCTCTTTTATATCCTGTAC ATAATTTTGTTTACTTTCTCAGATAATTTATTTTCTGTTAAATTGGTTTTATTACTTCAC GATAACACTATGTATGGCGATCTATTCTGTAATCCTTTCAACATATTGTTATCGTGTTAA TATTTTATTTTTTTGCTTTCTATGTATTGTTTCTGAGATATTTTGTTACACATGTTTCTT CATGTATTCGATACTTGCAAAAACAAAGAGTT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10029#0      GTTTATGGCATTCTTCAAATCCCTGAAGGATCCTGGATGTGTCGACAGTGTGAGGCGGGT 60
consensus_10029#1      ----AGGCCAANATTCGG----CACGAGGCTTGTTTAAGAGAATGTGGCGTATATCTGAA 52
                           * * **   ***      *   *** *  *  * * *      * **    * *  

consensus_10029#0      GTCAAATCAACCACCCCCTGCAGCTTAT---GTCCGAACACTGGTGGG--GCTATGAAAC 115
consensus_10029#1      ATCCAATTGTCTGCTCTTGAAAAACAAAACAGTCTAATATCTAGTGAATTACTCCGGACT 112
                        ** ***   *  * *     *    *    ***  *   ** ***     **  * *  

consensus_10029#0      TTTCAGATGACGGACAACGCTGGTGCCATGTAAGCTGTGCCTTGTGGGTTCCAGAAGTTG 175
consensus_10029#1      GCTCATATCGGTGAATCTGTTTATGATAATTGGGAATTGTTTT-TAGCTTATAATAATC- 170
                         *** **    **    * *  **  *  *  *   **  ** * * **  *  * *  

consensus_10029#0      GGTTTGGTGACGTCGAAATGATGGAGCCCATTATAAAACTAGA--CAATATACCACA-AG 232
consensus_10029#1      --CTTCGCGTCAGCGTGTTGATCAGGGTAAAAATATGTCCCACATTAGTGAATCAAATAA 228
                          ** * * *  **   ****   *   *  ***   *       * *  * ** * * 

consensus_10029#0      CTAGACGAAACCTTT-TGTGTTCAATATGTCGTTCACG-CTATGGTGCTCCTGTACAGTG 290
consensus_10029#1      CGAGTCGAAGTCTTCACCTGTTTATACTGTTAATGAAAACAACTCTAGTTTTTCGCAGAC 288
                       * ** ****  ***    **** *   ***   * *   * *   *  *  *   ***  

consensus_10029#0      TTCTAGTGTTAAGTGTAA----GACAGCATTCCATGTCACATGCGCGTTCCAAAGCAACC 346
consensus_10029#1      TTCTA-TGCCTAATGCAACTATAAAAGTAAACGAAAGCATCGATTCATTCAATATTAGTG 347
                       ***** **   * ** **     * ** *  * *   **      * *** * *  *   

consensus_10029#0      TCGTCATGCGCCAAGAGCTTGTCGACAAGGATGTGCGCTTAATAGGG--------TTGTG 398
consensus_10029#1      CTATTCCTAAAGAATGTCTCATTGTTTCCGATACA-ATTAAACAGAGACTTCGTTCTGCG 406
                          *        **   **  * *     ***      * ** ** *         ** *

consensus_10029#0      TTGGAAGCATTCCCGAAAAGA-GCAACAGTCAGCAACTCACCATTCTTCTGCTAGCTGTG 457
consensus_10029#1      TTAACATTAGTCGCGGAAAATTGTAATATGTGGAGAGCAGACAAACATGTAGAAAGTCCC 466
                       **   *  * ** ** ***   * ** *    *  *     **  * * *   *  *   

consensus_10029#0      ATTCAAATTCCTTTCGCTCTCCGAATTCTCCTATCAAGGTACATGATGCAAATCAAAACT 517
consensus_10029#1      AATCATAAGCGTAAAACGAAC--AATCATTATATCAAATCACATAAGTCTCTTTCACTTA 524
                       * *** *  * *    *   *  ***  *  ******   **** *  *   *  *    

consensus_10029#0      TCGGGAGTGGA-ATGCAACCAGTAG-CCTTAACG--CGTAAACAAAGACTCCTTGAACTG 573
consensus_10029#1      ATCGATTTGAACGTTCACCCCTCAGATCTCATTGTTCTTCACCATTAACTTCATCAACTA 584
                          *   ** *  * ** **   **  ** *  *  * * * **   *** * * **** 

consensus_10029#0      GAGTGTAATTTTCATAATTTGGTGCAAGAGTCCCACTTGAATATCTGGTTGGATAATGAC 633
consensus_10029#1      AAATAAATAAGCCATCA------GAAAATGATATGCCTATTGTTCAAGTGAAATTATCGC 638
                        * *  *     *** *      * **  *     * *     **  **   ** **  *

consensus_10029#0      TCCATGAAAATGCACTTGGGAAATTCAGCTTTTCTAAATGAAGGTGAACA-TAGACACGT 692
consensus_10029#1      CAATTTCAGATAAA---GCATCATTTAATTATGTTAAA--AATGTAAATAGTAGTAATAA 693
                           *  * **  *   *    *** *  * *  ****  ** ** ** * ***  *   

consensus_10029#0      TCCT-AATG---ACTTTCGTGCAGCCATTTTCGTTTACTGGCGTTTAAAAAGGCGGGCAA 748
consensus_10029#1      TAATGAATGTACACCTACAAGAAAACGTAAACACTTGAATAGTTCTAACTCAGTATTCGA 753
                       *  * ****   ** * *  * *  * *   *  **       * ***    *    * *

consensus_10029#0      ACTTTAACCAACCACTAGTCAATCCAGCTCCATTA--ACTTGGAAAGAAAGTGCTGATCA 806
consensus_10029#1      AC---AATCACCACCTAGTCATTCTATTCCTGTTCTTACTAAATTAGCAATGATTACTTT 810
                       **   ** ** *  ******* ** *   *  **   ***     ** **    *  *  

consensus_10029#0      AGTAGCTGCCACGACCAAGGAAGAACTAGCCCGAGTAGAACGCGCTAATTCTGATATGAA 866
consensus_10029#1      ATCACCTGGAGCTGCTAAATTTCTATGAGCCTTTCTTTCACACAAGATTTTAGCTATATA 870
                       *  * ***   *  * **      *  ****    *   ** *   * **  * ***  *

consensus_10029#0      AGCATTTGAGTCATTCAAACGTATTAGATTCGGT-----CTTGACAGGGCTAGA--TTAA 919
consensus_10029#1      ATTTCTCTGATCTTGTATATATAATATACTGTATAATTGTATTATATGGTTAGAACTTAT 930
                       *    *    ** *  * *  ** ** * *   *       * * * ** ****  *** 

consensus_10029#0      TGGCAGATATGGTCTTGCAAAGAGAACGACGGAAATTAGCTCTGTTTAAGAGAATGTGGC 979
consensus_10029#1      CATTGAACATATCTCTTTTATATCCTGTACATAATTTTGTTTACTTTCTCAGATAATTTA 990
                             * **     *   *        **  ** ** * *   ***   ***   *   

consensus_10029#0      GTATATCTGAAATCCAATTGTCTGCTCTTGAAAAACAAAACAGTCTAATATCTAGTGAAT 1039
consensus_10029#1      TTTTCTGTTAAATTGGTTTTATTACTT--------CACGATAACACTATGTATGGCGATC 1042
                        * * * * ****    **   * **         **  * *     ** * * * **  

consensus_10029#0      TACTCCGGACTGCTCATATCGGTGAATCTGTTTATGATAATTGGGAATTGTTTTTAGCTT 1099
consensus_10029#1      TATTCTGTAATCCTTTCAACAT--ATTGTTATCGTGTTAATATTTTATT-TTTTTGCTTT 1099
                       ** ** * * * **   * *    * * *  *  ** ****     *** *****   **

consensus_10029#0      ATA-ATAATCCTTC-GCGTCAGCGTGTTGATCAGGGTAAAA-ATATGTCCCACATTAGTG 1156
consensus_10029#1      CTATGTATTGTTTCTGAGATATTTTGTTACACATGTTTCTTCATGTATTCGATACTTGCA 1159
                        **  ** *  *** * *  *   ****   ** * *     ** * * * * * * *  

consensus_10029#0      AATCAAATAACGAGTCGAAGTCTCACCTGTTTATACTGTTAATGAAA 1203
consensus_10029#1      A---AAACAAAGAGTT------------------------------- 1172
                       *   *** ** ****                                




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)