cluster # 10030

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Schistosoma mansoni
cluster # 10030 cluster # 10030 Sequences # 13 consensus # 10

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10030#0 length = 578 sequences # 1
consensus_10030#1 length = 527 sequences # 1
consensus_10030#2 length = 459 sequences # 1
consensus_10030#3 length = 443 sequences # 1
consensus_10030#4 length = 422 sequences # 4

consensus_10030#5 length = 416 sequences # 1
consensus_10030#6 length = 373 sequences # 1
consensus_10030#7 length = 313 sequences # 1
consensus_10030#8 length = 127 sequences # 1
consensus_10030#9 length = 89 sequences # 1

consensusID : consensus_10030#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 578
fasta sequence

                              [AGCCATTTCTTGGCACTCATCATTCACCTGATCACCCCAATTTATCTTTATGAAATTCTGGATTCAGTCATTTATAATTAACATAAAGCCTGGAAAAAATGTACTTTAGTCAAAGTTTGCATAGCATTTCACCACAACGAGATGGAATCAACTCAGTAATCGAAATCATTATTCTGTAGAAATAGTAATGAGAAAGACAAAACATTGAAAATATTGCTACAAAAACAGATTAGAACGTTGCGTATGAAGGAATAATGTAACTCAAGATCAAAATGAAGATAAAAAGCGTAGAAAAAATATCCGTTCTATTGTGATCAGTTATGAACCATGTTACCGAATGTCTCGAAGTAGTCAGTCAGTCAGCTACAACGTAGGACCAGGCACATGTATGTATCGGTCCAAGTTGCCATACCTCATTAGCACAACAAGATGAAAGCCGAATTCATAGAAGTAGTTTATTTAGTTGTGGTAATGTATAAAAGAAAGGCTGTATATAAGGATATAGGAGAGAAGGAAACACAGCTATGAAGCAATTTTAATCTCAAGGTTTAAGGGAAGATAAAGAGTGTATACACCTA]

[+] EMBL CD169363             [AGCCATTTCTTGGCACTCATCATTCACCTGATCACCCCAATTTATCTTTATGAAATTCTGGATTCAGTCATTTATAATTAACATAAAGCCTGGAAAAAATGTACTTTAGTCAAAGTTTGCATAGCATTTCACCACAACGAGATGGAATCAACTCAGTAATCGAAATCATTATTCTGTAGAAATAGTAATGAGAAAGACAAAACATTGAAAATATTGCTACAAAAACAGATTAGAACGTTGCGTATGAAGGAATAATGTAACTCAAGATCAAAATGAAGATAAAAAGCGTAGAAAAAATATCCGTTCTATTGTGATCAGTTATGAACCATGTTACCGAATGTCTCGAAGTAGTCAGTCAGTCAGCTACAACGTAGGACCAGGCACATGTATGTATCGGTCCAAGTTGCCATACCTCATTAGCACAACAAGATGAAAGCCGAATTCATAGAAGTAGTTTATTTAGTTGTGGTAATGTATAAAAGAAAGGCTGTATATAAGGATATAGGAGAGAAGGAAACACAGCTATGAAGCAATTTTAATCTCAAGGTTTAAGGGAAGATAAAGAGTGTATACACCTA]




>consensus_10030#0
AGCCATTTCTTGGCACTCATCATTCACCTGATCACCCCAATTTATCTTTATGAAATTCTG
GATTCAGTCATTTATAATTAACATAAAGCCTGGAAAAAATGTACTTTAGTCAAAGTTTGC
ATAGCATTTCACCACAACGAGATGGAATCAACTCAGTAATCGAAATCATTATTCTGTAGA
AATAGTAATGAGAAAGACAAAACATTGAAAATATTGCTACAAAAACAGATTAGAACGTTG
CGTATGAAGGAATAATGTAACTCAAGATCAAAATGAAGATAAAAAGCGTAGAAAAAATAT
CCGTTCTATTGTGATCAGTTATGAACCATGTTACCGAATGTCTCGAAGTAGTCAGTCAGT
CAGCTACAACGTAGGACCAGGCACATGTATGTATCGGTCCAAGTTGCCATACCTCATTAG
CACAACAAGATGAAAGCCGAATTCATAGAAGTAGTTTATTTAGTTGTGGTAATGTATAAA
AGAAAGGCTGTATATAAGGATATAGGAGAGAAGGAAACACAGCTATGAAGCAATTTTAAT
CTCAAGGTTTAAGGGAAGATAAAGAGTGTATACACCTA

consensusID : consensus_10030#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 527
fasta sequence

                              [GGAAAAGGATTGGGTACACTTTGAGGAAATCACCCAATTGCGTCATGAGACAAGCCCCACATGGAATCCTGAAGGCCAAAGGAGAAGAGGAAGACCAAAGAACACATTACGCCGAGAAATAGAGACAGACATGAGAAAAATGAATAGAACTAGAAAAGAAGGAACCTGGACAGAGCGGTTTGGAGAATGCTGGTTTGCGGCCTATGCTCCATTGGGAGTAAAAGGTGTAAGTAAAGTAAGTAAGTATGACCATCTTGAGACAGATTCTTAATCTTTGAATCTTTTCTGATGTATTGATTTTTCTTTGTTTATTTGTTTCTTCCTATCCATATGTTGTTTTGAAGAAACCCGTTAGACAATTTGGTGAAGTTCTTGAAAGTAGGACGTCTGGTCAACTGCATAATATTTTAGTAGCAATGTGTAAGTACTATCAATCTAGTATACGTTTTCTCAAGTAAATATAAACGTTTTTATTGAATGGACCTCATTTTCAGCGTATGTATCATTTACCTCATTTTGAATGCTCA]

[+] EMBL CD129541             [GGAAAAGGATTGGGTACACTTTGAGGAAATCACCCAATTGCGTCATGAGACAAGCCCCACATGGAATCCTGAAGGCCAAAGGAGAAGAGGAAGACCAAAGAACACATTACGCCGAGAAATAGAGACAGACATGAGAAAAATGAATAGAACTAGAAAAGAAGGAACCTGGACAGAGCGGTTTGGAGAATGCTGGTTTGCGGCCTATGCTCCATTGGGAGTAAAAGGTGTAAGTAAAGTAAGTAAGTATGACCATCTTGAGACAGATTCTTAATCTTTGAATCTTTTCTGATGTATTGATTTTTCTTTGTTTATTTGTTTCTTCCTATCCATATGTTGTTTTGAAGAAACCCGTTAGACAATTTGGTGAAGTTCTTGAAAGTAGGACGTCTGGTCAACTGCATAATATTTTAGTAGCAATGTGTAAGTACTATCAATCTAGTATACGTTTTCTCAAGTAAATATAAACGTTTTTATTGAATGGACCTCATTTTCAGCGTATGTATCATTTACCTCATTTTGAATGCTCA]




>consensus_10030#1
GGAAAAGGATTGGGTACACTTTGAGGAAATCACCCAATTGCGTCATGAGACAAGCCCCAC
ATGGAATCCTGAAGGCCAAAGGAGAAGAGGAAGACCAAAGAACACATTACGCCGAGAAAT
AGAGACAGACATGAGAAAAATGAATAGAACTAGAAAAGAAGGAACCTGGACAGAGCGGTT
TGGAGAATGCTGGTTTGCGGCCTATGCTCCATTGGGAGTAAAAGGTGTAAGTAAAGTAAG
TAAGTATGACCATCTTGAGACAGATTCTTAATCTTTGAATCTTTTCTGATGTATTGATTT
TTCTTTGTTTATTTGTTTCTTCCTATCCATATGTTGTTTTGAAGAAACCCGTTAGACAAT
TTGGTGAAGTTCTTGAAAGTAGGACGTCTGGTCAACTGCATAATATTTTAGTAGCAATGT
GTAAGTACTATCAATCTAGTATACGTTTTCTCAAGTAAATATAAACGTTTTTATTGAATG
GACCTCATTTTCAGCGTATGTATCATTTACCTCATTTTGAATGCTCA

consensusID : consensus_10030#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 459
fasta sequence

                              [TGGCTTGGNTGGNAAATCACGNAGTTATATATATGATTGTTAAAAAAAATACAATTAATCTAGATCAATAATTAGTTAGCTTTTAAATCTCTTAAATACCCGAAATATGCATACAGTCGCGAATACATACCTTTTACAACTCTGGTGGCTGAATGTATGAAATGATACAATATTTAGAATATGGAGCGACACGAAGCATTAGAGCACCTGAGCACAAACTTACGCCTTTTACTCCCAATGGAGCATAAGCCGCTGACTAGCATTCTCCAATCCACTCTGTTCTGGGCCTTCCTTTCTAGTTCTATCCAACTTTTGTTCATTCTTCTCATGTCTGTTTCCATTTCTCGGCGTAATGTGTTCCTTGGTTTTCCTCTTCTCCTTTGGCCTTGACGACTCCAAGTGAGGGCTTGTCTTGTGACACAATTGGGTGATTTCCTCAATGTGTGTCCTATCCACTTC]

[+] EMBL CD129599             [TGGCTTGGNTGGNAAATCACGNAGTTATATATATGATTGTTAAAAAAAATACAATTAATCTAGATCAATAATTAGTTAGCTTTTAAATCTCTTAAATACCCGAAATATGCATACAGTCGCGAATACATACCTTTTACAACTCTGGTGGCTGAATGTATGAAATGATACAATATTTAGAATATGGAGCGACACGAAGCATTAGAGCACCTGAGCACAAACTTACGCCTTTTACTCCCAATGGAGCATAAGCCGCTGACTAGCATTCTCCAATCCACTCTGTTCTGGGCCTTCCTTTCTAGTTCTATCCAACTTTTGTTCATTCTTCTCATGTCTGTTTCCATTTCTCGGCGTAATGTGTTCCTTGGTTTTCCTCTTCTCCTTTGGCCTTGACGACTCCAAGTGAGGGCTTGTCTTGTGACACAATTGGGTGATTTCCTCAATGTGTGTCCTATCCACTTC]




>consensus_10030#2
TGGCTTGGNTGGNAAATCACGNAGTTATATATATGATTGTTAAAAAAAATACAATTAATC
TAGATCAATAATTAGTTAGCTTTTAAATCTCTTAAATACCCGAAATATGCATACAGTCGC
GAATACATACCTTTTACAACTCTGGTGGCTGAATGTATGAAATGATACAATATTTAGAAT
ATGGAGCGACACGAAGCATTAGAGCACCTGAGCACAAACTTACGCCTTTTACTCCCAATG
GAGCATAAGCCGCTGACTAGCATTCTCCAATCCACTCTGTTCTGGGCCTTCCTTTCTAGT
TCTATCCAACTTTTGTTCATTCTTCTCATGTCTGTTTCCATTTCTCGGCGTAATGTGTTC
CTTGGTTTTCCTCTTCTCCTTTGGCCTTGACGACTCCAAGTGAGGGCTTGTCTTGTGACA
CAATTGGGTGATTTCCTCAATGTGTGTCCTATCCACTTC

consensusID : consensus_10030#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 443
fasta sequence

                              [TCAAGGTACAAGCACAGTTACGCAGAAGCAAACAGGCAAGTGAAGGAGAGCGTTAAAGCCGACAGGCAGAAATACATGGGAGAACTAGCAACGACGGCGGAAAAAATTGCAACAGAAGGGAATATGAAACAACTATATGATACAACGAAGAAACTAGTAGGGAGATATAGTAAACCGGAGAGACCAGTCAACGACAAAGAAGGAAAGACAATTATGGAAATTCAAGTACAGAGGATGAGATGAGTAGTATACTTTGAGGAACTGCTGAATAGACCAGCTCCATTGAATCCACCGGAGATCGAATCAGTACACACTGACCTTCCTATAGATGTCACTCCACCAACGATCGAGGAAGTCAAGATGGCCATCAGGTAAATCAAGAGCGAGAAAGCCACAGGACCTGACAATATACCAGCTGAAGCACTGATGTCATACATAAACGC]

[+] EMBL CD196903             [TCAAGGTACAAGCACAGTTACGCAGAAGCAAACAGGCAAGTGAAGGAGAGCGTTAAAGCCGACAGGCAGAAATACATGGGAGAACTAGCAACGACGGCGGAAAAAATTGCAACAGAAGGGAATATGAAACAACTATATGATACAACGAAGAAACTAGTAGGGAGATATAGTAAACCGGAGAGACCAGTCAACGACAAAGAAGGAAAGACAATTATGGAAATTCAAGTACAGAGGATGAGATGAGTAGTATACTTTGAGGAACTGCTGAATAGACCAGCTCCATTGAATCCACCGGAGATCGAATCAGTACACACTGACCTTCCTATAGATGTCACTCCACCAACGATCGAGGAAGTCAAGATGGCCATCAGGTAAATCAAGAGCGAGAAAGCCACAGGACCTGACAATATACCAGCTGAAGCACTGATGTCATACATAAACGC]




>consensus_10030#3
TCAAGGTACAAGCACAGTTACGCAGAAGCAAACAGGCAAGTGAAGGAGAGCGTTAAAGCC
GACAGGCAGAAATACATGGGAGAACTAGCAACGACGGCGGAAAAAATTGCAACAGAAGGG
AATATGAAACAACTATATGATACAACGAAGAAACTAGTAGGGAGATATAGTAAACCGGAG
AGACCAGTCAACGACAAAGAAGGAAAGACAATTATGGAAATTCAAGTACAGAGGATGAGA
TGAGTAGTATACTTTGAGGAACTGCTGAATAGACCAGCTCCATTGAATCCACCGGAGATC
GAATCAGTACACACTGACCTTCCTATAGATGTCACTCCACCAACGATCGAGGAAGTCAAG
ATGGCCATCAGGTAAATCAAGAGCGAGAAAGCCACAGGACCTGACAATATACCAGCTGAA
GCACTGATGTCATACATAAACGC

consensusID : consensus_10030#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 422
fasta sequence

                              [ACCCCCATGTGAAGAAGGAGATTGATTATGAATACAGTGGTCTTGAGTGTTGTTAGAGGTATGAAAGCAGTTATCACTTCCCGGGCGGAGACGTGGAGAACTACGAAAGCCATTATCCAGAAGATACAAGTGTTTATTAACAGCTGTCTACGCAAGATACTTCGGATCCGATGGCCAGACACTATCAGCAACAAGTTACTGTGGGAGACAACAAACCAGATTCCATCCAGCGGAGGAAGAAATCAGGAAGAAGCGCTGGAAGTGGATTGGGCACACTTTGAGGAAATCACCCAATTGTGTCACAAGACAAGCCCTCACATGGAATCCTGAAGGTCGAAGGAGAAGAGGAAGACCAAAGAACACATTACGCCGAGAAATAGAGACAGACATGAGAAGAATGAACAAGAACTGGAAAGAACTAG]

[-] EMBL CD064772             [ACCCCCATGTGAAGAAGGAGATTGATTATGAATACAGTGGTCTTGAGTGTTGTTAGAGGTATGAAAGCAGTTATCACTTCCCGGGCGGAGATGTGGAGAACTACGAAAGCCATTATCCAGAAGATACAAGTGTTTATTAACAGCTGTCTACGCAAGATACTTCGGATCAGATGGCCAGACACTATCAGCAACAAGTTACTGTGAGAGACAACAAACCACAT    TCCAGCAGAGGAAGAAATCAGGAAGAAGCGCTGGAAGTGGATTGGGCACACCTTGAGGAAATCACCTAATTGCGTCACAA                                                                                                                     ]
[+] EMBL CD183335             [                                                                          tctgtatgGGGCAGAGACGTGGAGAACTACGAAAGCCATTATCCAGAAGATACAAGTGTTTATTAACAGCTGTCTACGCAAGATACTTCGGATCCGATGGCCAGACACTATCAGCAACAAGTTACTGTGGGAGACAACAAACCAGATTCCATCCAGCGGAGGAAGAAATCAGGAAGAAGCGCTGGAAGTGGATTGGGCACACTTTGAGGAAATCACCCAATTGTGTCACAAGACAAGCCCTCACATGGAATCCTGAAGGTCGAAGGAGAAGAGGAAGACCAAAGAACACATTACGCCGAGAAATAGAGACAGACATGAGAAGAATGAACAAGAACTGGAAAGAACTAG]
[+] EMBL CD197974             [                                                                                           CGTGGAGAACTACGAAAGCCATTATCCAGAAGATACCAGTGTTTATCAACAGCTGTCTACGCAAGATACTTCGGATCCGATGGCCAGACACTATCAGCAACAATTTACTGTGGGAGACAACAAACCAGATTCCATCCAGCGGAGGGAGAAATGAGGAAGAAGCGCTGGAAGTGGATTGGGCACACTTTGAGGAAATCACCCAATTGTGTCACAAGACAAGCCCT                                                                                                           ]
[+] EMBL CD066518             [                                                                                                                                                                                                                                                                 GGAAGTGGATTGGGCACACTTTGAGGAAGTCACCCAATTGAGTCACACGACAAGCCCTCACATGGAATCCTGAAGGTCACAGGAGAAGAGG                                                                          ]




>consensus_10030#4
ACCCCCATGTGAAGAAGGAGATTGATTATGAATACAGTGGTCTTGAGTGTTGTTAGAGGT
ATGAAAGCAGTTATCACTTCCCGGGCGGAGACGTGGAGAACTACGAAAGCCATTATCCAG
AAGATACAAGTGTTTATTAACAGCTGTCTACGCAAGATACTTCGGATCCGATGGCCAGAC
ACTATCAGCAACAAGTTACTGTGGGAGACAACAAACCAGATTCCATCCAGCGGAGGAAGA
AATCAGGAAGAAGCGCTGGAAGTGGATTGGGCACACTTTGAGGAAATCACCCAATTGTGT
CACAAGACAAGCCCTCACATGGAATCCTGAAGGTCGAAGGAGAAGAGGAAGACCAAAGAA
CACATTACGCCGAGAAATAGAGACAGACATGAGAAGAATGAACAAGAACTGGAAAGAACT
AG

consensusID : consensus_10030#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 416
fasta sequence

                              [TGTGAAAACCTTCACATATCTGGGCAGCATCATTGATGAACACGGTGGACCTGATGCAGATGTGAAAACGTGCATCGGCAAAGCAAGAGTAGCATATTTACAAATGAAGAACATCCGCAACTCAAAACAATTGTCAACCAACACCAAAGTCACAATTTTCAATACAAATGTCAAGACAGTTCTATTGTATGGGGCAGAAACTCGAAGAACTACGAAAGCCATCATCCAGAAGATACATGAGTTTATTAACAGTTGTCTATGCAAAATACTGAATGTCCGTTGATCAGATATTATCAACAAGAACCTACTGTGGGAGAGAACAAACCAGATTTCAATGGAGAAAGGAATCAGGAAGAATCGCTGGAAGTGTATAGAACACACATTGAGGAAATCACCCAATTGAGTCACAATACAAG]

[+] EMBL CD061761             [TGTGAAAACCTTCACATATCTGGGCAGCATCATTGATGAACACGGTGGACCTGATGCAGATGTGAAAACGTGCATCGGCAAAGCAAGAGTAGCATATTTACAAATGAAGAACATCCGCAACTCAAAACAATTGTCAACCAACACCAAAGTCACAATTTTCAATACAAATGTCAAGACAGTTCTATTGTATGGGGCAGAAACTCGAAGAACTACGAAAGCCATCATCCAGAAGATACATGAGTTTATTAACAGTTGTCTATGCAAAATACTGAATGTCCGTTGATCAGATATTATCAACAAGAACCTACTGTGGGAGAGAACAAACCAGATTTCAATGGAGAAAGGAATCAGGAAGAATCGCTGGAAGTGTATAGAACACACATTGAGGAAATCACCCAATTGAGTCACAATACAAG]




>consensus_10030#5
TGTGAAAACCTTCACATATCTGGGCAGCATCATTGATGAACACGGTGGACCTGATGCAGA
TGTGAAAACGTGCATCGGCAAAGCAAGAGTAGCATATTTACAAATGAAGAACATCCGCAA
CTCAAAACAATTGTCAACCAACACCAAAGTCACAATTTTCAATACAAATGTCAAGACAGT
TCTATTGTATGGGGCAGAAACTCGAAGAACTACGAAAGCCATCATCCAGAAGATACATGA
GTTTATTAACAGTTGTCTATGCAAAATACTGAATGTCCGTTGATCAGATATTATCAACAA
GAACCTACTGTGGGAGAGAACAAACCAGATTTCAATGGAGAAAGGAATCAGGAAGAATCG
CTGGAAGTGTATAGAACACACATTGAGGAAATCACCCAATTGAGTCACAATACAAG

consensusID : consensus_10030#6
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 373
fasta sequence

                              [CCACCAGGCTGCTGCTCCAACGGTTGCACACCCAACATAGATGCCTATCAACATGTATCGAAGGAATAACCAACCGGAAATTAATGGTTCTTTGCTTTTGCGTGGTGGTTTAGTCATTATATCAACATCAGGAGGATTAAATCCTAAAGCTGTAGCAGGTAGACCATCAGTGACTAAGTTAACCCAGAGTAATTGTACAGGAATCAAAGCCTACATTTGGAAAGATAACAATTGAAGTGGATACACGACCGCAACGTTTACCATTACGTGATATAATTTTACCGAATGGTATTGATTCACAACGAATTCTTGGTTTAGAATTGGGCAGAGTATGCTTCCAGTAGGAAAACACATTTATACTTGACAATACTGA]

[+] EMBL CD136735             [CCACCAGGCTGCTGCTCCAACGGTTGCACACCCAACATAGATGCCTATCAACATGTATCGAAGGAATAACCAACCGGAAATTAATGGTTCTTTGCTTTTGCGTGGTGGTTTAGTCATTATATCAACATCAGGAGGATTAAATCCTAAAGCTGTAGCAGGTAGACCATCAGTGACTAAGTTAACCCAGAGTAATTGTACAGGAATCAAAGCCTACATTTGGAAAGATAACAATTGAAGTGGATACACGACCGCAACGTTTACCATTACGTGATATAATTTTACCGAATGGTATTGATTCACAACGAATTCTTGGTTTAGAATTGGGCAGAGTATGCTTCCAGTAGGAAAACACATTTATACTTGACAATACTGA]




>consensus_10030#6
CCACCAGGCTGCTGCTCCAACGGTTGCACACCCAACATAGATGCCTATCAACATGTATCG
AAGGAATAACCAACCGGAAATTAATGGTTCTTTGCTTTTGCGTGGTGGTTTAGTCATTAT
ATCAACATCAGGAGGATTAAATCCTAAAGCTGTAGCAGGTAGACCATCAGTGACTAAGTT
AACCCAGAGTAATTGTACAGGAATCAAAGCCTACATTTGGAAAGATAACAATTGAAGTGG
ATACACGACCGCAACGTTTACCATTACGTGATATAATTTTACCGAATGGTATTGATTCAC
AACGAATTCTTGGTTTAGAATTGGGCAGAGTATGCTTCCAGTAGGAAAACACATTTATAC
TTGACAATACTGA

consensusID : consensus_10030#7
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 313
fasta sequence

                              [CTGGATCATAAAGACTTCAACATCTTGAAGAAAGCACGGGATACAATGGACAGACAGGATGCAGCTTGACGAGTTAGACTTCGCAGGTGATCTGGCTCTTTTATCACACACGCAACAACAAATGCAGAAGACGACCATTGTAGCATCAGCCACAGCAGCAGTAGGACTCAATATAAACAAAGGGAAAAGCAAGACTCCCTGATACAATACAACATGCACCAATCGAATTACATTTGACGGAGAAGCTTTGGAGGATGTGGTAACCTTTACATATCTGGGCAGCATCATTGATGAACATGGTGGATCAGATGCA]

[+] EMBL CD183072             [CTGGATCATAAAGACTTCAACATCTTGAAGAAAGCACGGGATACAATGGACAGACAGGATGCAGCTTGACGAGTTAGACTTCGCAGGTGATCTGGCTCTTTTATCACACACGCAACAACAAATGCAGAAGACGACCATTGTAGCATCAGCCACAGCAGCAGTAGGACTCAATATAAACAAAGGGAAAAGCAAGACTCCCTGATACAATACAACATGCACCAATCGAATTACATTTGACGGAGAAGCTTTGGAGGATGTGGTAACCTTTACATATCTGGGCAGCATCATTGATGAACATGGTGGATCAGATGCA]




>consensus_10030#7
CTGGATCATAAAGACTTCAACATCTTGAAGAAAGCACGGGATACAATGGACAGACAGGAT
GCAGCTTGACGAGTTAGACTTCGCAGGTGATCTGGCTCTTTTATCACACACGCAACAACA
AATGCAGAAGACGACCATTGTAGCATCAGCCACAGCAGCAGTAGGACTCAATATAAACAA
AGGGAAAAGCAAGACTCCCTGATACAATACAACATGCACCAATCGAATTACATTTGACGG
AGAAGCTTTGGAGGATGTGGTAACCTTTACATATCTGGGCAGCATCATTGATGAACATGG
TGGATCAGATGCA

consensusID : consensus_10030#8
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 127
fasta sequence

                              [GACGTCAAATAAGGAAGTTTAGAGTTGAAAGTCCAGATAGGAGGAATAATAGGAATTGAAGAGGGAGATTGATTATGAATACAGTGATCTTGAGTGATGTTAGAGGTATGAAGGCAGTCACCACTCT]

[+] EMBL CD088224             [GACGTCAAATAAGGAAGTTTAGAGTTGAAAGTCCAGATAGGAGGAATAATAGGAATTGAAGAGGGAGATTGATTATGAATACAGTGATCTTGAGTGATGTTAGAGGTATGAAGGCAGTCACCACTCT]




>consensus_10030#8
GACGTCAAATAAGGAAGTTTAGAGTTGAAAGTCCAGATAGGAGGAATAATAGGAATTGAA
GAGGGAGATTGATTATGAATACAGTGATCTTGAGTGATGTTAGAGGTATGAAGGCAGTCA
CCACTCT

consensusID : consensus_10030#9
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 89
fasta sequence

                              [TCGGGTGGAGAAAGAAGTCAAGAAGAAGCGCTGGAAGTGGATTGGGCACACTTTGAGGAAGTCACCCTACTGCGTCACAAAACAAGCCC]

[+] EMBL CD066996             [TCGGGTGGAGAAAGAAGTCAAGAAGAAGCGCTGGAAGTGGATTGGGCACACTTTGAGGAAGTCACCCTACTGCGTCACAAAACAAGCCC]




>consensus_10030#9
TCGGGTGGAGAAAGAAGTCAAGAAGAAGCGCTGGAAGTGGATTGGGCACACTTTGAGGAA
GTCACCCTACTGCGTCACAAAACAAGCCC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10030#8      ------------------------------------------------------------
consensus_10030#4      ------------------------------------------------------------
consensus_10030#9      ------------------------------------------------------------
consensus_10030#5      ------------------------------------------------------------
consensus_10030#1      -----------------------------------------GGAAAAGGATTGGGTACAC 19
consensus_10030#6      ------------------------------------------------------------
consensus_10030#0      AGCCATTTCTTGGCACTCATCATTCACCTGATCACCCCAATTTATCTTTATGAAATTCTG 60
consensus_10030#7      ------------------------------------------------------------
consensus_10030#3      ------------------------------------------------------------
consensus_10030#2      ------------------------------------------------------------
                                                                                   

consensus_10030#8      ------------------------------------------------------------
consensus_10030#4      ------------------------------------------------------------
consensus_10030#9      ------------------------------------------------------------
consensus_10030#5      -------TGTGAAAACCTTCACATATCTGGGCAGCATCATTGATGAACACGGTGGACCTG 53
consensus_10030#1      TTTGAGGAAATCACCCAATTGCGTCATGAGACAAGCCCCACATGGAATCCTGAAGGCCAA 79
consensus_10030#6      -------------------------------------------------------CCACC 5
consensus_10030#0      GATTCAGTCATTTATAATTAACATAAAGCCTGGAAAAAATGTACTTTAGTCAAAGTTTGC 120
consensus_10030#7      ------------------------------------------------------------
consensus_10030#3      ----------------------------------TCAAGGTACAAGCACAGTTACGCAGA 26
consensus_10030#2      ----------------------------TGGCTTGGNTGGNAAATCACGNAGTTATATAT 32
                                                                                   

consensus_10030#8      -------------GACGTCAAAT--AAGGAAGTTTAGAGTTGAA-AGTCC-AGATAGGAG 43
consensus_10030#4      ------------------------------------------------------------
consensus_10030#9      ------------------------------------------------------------
consensus_10030#5      ATGCAGATGTGAAAACGTGCAT---CGGCAAAGCAAGAGTAGCA-TATTT-ACAAATGAA 108
consensus_10030#1      AGGAGAAGAGGAAGACCAAAGAACACATTACGCCGAGAAATAGA-GACAG-ACATGAGAA 137
consensus_10030#6      AGGCTGCTGCTCCAACGGTTGCACACCCAACATAGATGCCTATC-AACAT-GTATCGAAG 63
consensus_10030#0      ATAGCATTTCACCACAACGAGATGGAATCAACTCAGTAATCGAA-ATCATTATTCTGTAG 179
consensus_10030#7      --------------------------CTGGATCATAAAGACTTC-AACATCTTGAAGAAA 33
consensus_10030#3      AGCAAACAGGCAAGTGAAGGAGAGCGTTAAAGCCGACAGGCAGA-AATACATGGGAGAAC 85
consensus_10030#2      ATGATTGTTAAAAAAAATACAATTAATCTAGATCAATAATTAGTTAGCTTTTAAATCTCT 92
                                                                                   

consensus_10030#8      GAATAATAGGAATTGAAGAGGGAG-ATTGATTATGAATACAGTGATCTTGAGTGATGTTA 102
consensus_10030#4      -ACCCCCATGTGAAGAAGG---AG-ATTGATTATGAATACAGTGGTCTTGAGTGTTGTTA 55
consensus_10030#9      ------------------------------------------------------------
consensus_10030#5      GAACATCCGCAACTCAAAA---CA-ATTGTCAACCAACACCAAAGTCACAATTTTCAATA 164
consensus_10030#1      AAATGAATAGAACTAGAAA---AG-AAGGAACCTGGACAGAGCGGTTTGGAG----AATG 189
consensus_10030#6      GAATAACCA-ACCGGAAATTAATG-GTTCTTTGCTTTTGCGTGGTGGTTTAGTCATTATA 121
consensus_10030#0      AAATAGTAATGAGAAAGACAAAAC-ATTGAAAATATTGCTACAAAAACAGATTAGAACGT 238
consensus_10030#7      GCACGGGATACAATGGACAGACAG-GATGCAGCTTGACGAGTTAGACTTCGCAGGTGATC 92
consensus_10030#3      TAGCAACGACGGCGGAAAAAATTGCAACAGAAGGGAATATGAAACAACTATATGATACAA 145
consensus_10030#2      TAAATACCCGAAATATGCATACAGTCGCGAATACATACCTTTTACAACTCTG-GTGGCTG 151
                                                                                   

consensus_10030#8      GAGGTATGAAGGCAGTCACCACTCT----------------------------------- 127
consensus_10030#4      GAGGTATGAAAGCAGTTATCACTTCCCGGGCGGAGACGTGGAGAACTACGAAAGCCATTA 115
consensus_10030#9      ------------------------------------------------------------
consensus_10030#5      CAAATGTCAAGACAGTTCTATTGTATGGGGCAGAAACTCGAAGAACTACGAAAGCCATCA 224
consensus_10030#1      CTGGTTTGCGGCCTATGCTCCATTGGGAGTAAAAGGTGTAAGTAAAGTAAGTAAGTATGA 249
consensus_10030#6      TCAACATCAGGAGGATTAAATCCTAAAGCTGTAGCAGGTAGACCATCAGTGACTAAGTTA 181
consensus_10030#0      TGCGTATGAAGG-AATAATGTAACTCAAGATCAAAATGAAGATAAAAAGCGTAGAAAAAA 297
consensus_10030#7      TGGCTCTTTTATCACACACGCAACAACAAATGCAGAAGACGACCATTGTAGCATCAGCCA 152
consensus_10030#3      CGAAGAAACTAGTAGGGAGATATAGTAAACCGGAGAGACCAGTCAACGACAAAGAAGGAA 205
consensus_10030#2      AATGTATGAAATGATACAATATTTAGAATATGGAGCGACACGAAGCATTAGAGCACCTGA 211
                                                                                   

consensus_10030#8      ------------------------------------------------------------
consensus_10030#4      TCCAGAAGATACAAGTGTTTATTAACA-GCTGTCTACGCAAGATACTTCGGATCCGATGG 174
consensus_10030#9      ------------------------------------------------------------
consensus_10030#5      TCCAGAAGATACATGAGTTTATTAACA-GTTGTCTATGCAAAATACTGAATGTCCGTTGA 283
consensus_10030#1      CCATCTTGAGACAGATTCTTAATCTTT-GAATCTTTTCTGATGTATTGATTTTTCTTTGT 308
consensus_10030#6      ACCCAGAGTAATTGTACAGGAATCAAA-GCCTACATTTGGAAAGATAACAATTGAAGTGG 240
consensus_10030#0      TATCCGTTCTATTGTGATCAGTTATGA-ACCATGTTACCGAATGTCTCGAAGTAGTCAGT 356
consensus_10030#7      CAGCAGCAGTAGGACTCAATATAAACA-AAGGGAAAAGCAAGACTCCCTGATACAAT--A 209
consensus_10030#3      AGACAATTATGGAAATTCAAGTACAGA-GGATGAGATGAGTAGTATACTTTGAGGAACTG 264
consensus_10030#2      GCACAAACTTACGCCTTTTACTCCCAATGGAGCATAAGCCGCTGACTAGCATTCTCCAAT 271
                                                                                   

consensus_10030#8      ------------------------------------------------------------
consensus_10030#4      CCAGACACTATCAGCAACAAGTTACTGTGGGAGA---CAACAAACCAGATTCCATCCAGC 231
consensus_10030#9      ------------------------------------------------------TCGGGT 6
consensus_10030#5      TCAGATATTATCAACAAGAACCTACTGTGGGAGA---GAACAAACCAGAT----TTCAAT 336
consensus_10030#1      TTATTTGTTTCTTCCTAT--CCATATGTTGTTTT---GAAGAAACCCGTT---AGACAAT 360
consensus_10030#6      ATACACGACCGCAACGTTTACCATTACGTGATAT---AATTTTACCGAAT-------GGT 290
consensus_10030#0      CAGTCAGCTACAACGTAGGACCAGGCACATGTAT---GTATCGGTCCAAGTTGCCATACC 413
consensus_10030#7      CAACATGCACCAATCGAATTACATTTGACGGAGA---AGCTTTGGAGGAT----GTGGTA 262
consensus_10030#3      CTGAATAGACCAGCTCCATTGAATCCACCGGAGATCGAATCAGTACACACTGACCTTCCT 324
consensus_10030#2      CCACTCTGTTCTGGGCCTTCCTTTCTAGTTCTATCCAACTTTTGTTCATTCTTCTCATGT 331
                                                                                   

consensus_10030#8      ------------------------------------------------------------
consensus_10030#4      GGAGGAAGAAATCAGGAAGAAGCGCTGGAAGTGGATTGGGCACACTTTGAGGA--AATCA 289
consensus_10030#9      GGAGAAAGAAGTCAAGAAGAAGCGCTGGAAGTGGATTGGGCACACTTTGAGGA--AGTCA 64
consensus_10030#5      GGAGAAAGGAATCAGGAAGAATCGCTGGAAGTGTATAGAACACACATTGAGGA--AATCA 394
consensus_10030#1      TTGGTGAAGTTCTTGAAAGTAGGACGTCTGGTCAACTGCATAATATTTTAGTAGCAATGT 420
consensus_10030#6      ATTGATTCACAACGAATTCTTGGTTTAGAATTGGGCAGAGTATGCTTCCAGTAGGAAAAC 350
consensus_10030#0      TCATTAGCACAACAAGATGAAAGCC--GAATTCATAGAAGTAGTTTATTTAGTTGTGGTA 471
consensus_10030#7      ACCTTTACATATCTGG--GCAGCATCATTGATGAACATGGTGGATCAGATGCA------- 313
consensus_10030#3      ATAGATGTCACTCCACCAACGATCGAGGAAGTCAAGATGGC-CATCAGGTAAATCAAGAG 383
consensus_10030#2      CTGTTTCCATTTCTCGGCGTAATGTGTTCCTTGGTTTTCCTCTTCTCCTTTGG--CCTTG 389
                                                                                   

consensus_10030#8      ------------------------------------------------------------
consensus_10030#4      CCCAATTGTGTCA---CAAGACAAGCCCTCACATGGAATCCTGAAGGTCGAAGGAGAAGA 346
consensus_10030#9      CCCTACTGCGTCA---CAAAACAAGCCC-------------------------------- 89
consensus_10030#5      CCCAATTGAGTCA---CAATACAAG----------------------------------- 416
consensus_10030#1      GTAAGTACTATCAATCTAGTATACGTTTTCTCAAGTAAATATAAACGTTTTTATTGAATG 480
consensus_10030#6      ACATTTATACTTGA--CAATACTGA----------------------------------- 373
consensus_10030#0      ATGTATAAAAGAAAGGCTGTATATAAGGATATAGGAGAGAAGGAAACACAGCTATGAAGC 531
consensus_10030#7      ------------------------------------------------------------
consensus_10030#3      CGAGAAAGCCACAGGACCTGACAATATACCAGCTGAAGCACTGATGTCATACATAAACGC 443
consensus_10030#2      ACGACTCCAAGTGAGGGCTTGTCTTGTGACACAATTGGGTGATTTCCTCAATGTGTGTCC 449
                                                                                   

consensus_10030#8      ------------------------------------------------------------
consensus_10030#4      GGAAGACCAAAGAACACATTACGCCGAGAAATAGAGACAGACATGAGAAGAATGAACAAG 406
consensus_10030#9      ------------------------------------------------------------
consensus_10030#5      ------------------------------------------------------------
consensus_10030#1      GACCTCATTTTCAGCGTATGTATCATTTACCTCATTTTGAATGCTCA------------- 527
consensus_10030#6      ------------------------------------------------------------
consensus_10030#0      AATTTTAATCTCAAGGTTTAAGGGAAGATAAAGAGTGTATACACCTA------------- 578
consensus_10030#7      ------------------------------------------------------------
consensus_10030#3      ------------------------------------------------------------
consensus_10030#2      TATCCACTTC-------------------------------------------------- 459
                                                                                   

consensus_10030#8      ----------------
consensus_10030#4      AACTGGAAAGAACTAG 422
consensus_10030#9      ----------------
consensus_10030#5      ----------------
consensus_10030#1      ----------------
consensus_10030#6      ----------------
consensus_10030#0      ----------------
consensus_10030#7      ----------------
consensus_10030#3      ----------------
consensus_10030#2      ----------------