These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10067#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1277 fasta sequence [TTTTTTTGTTTTACTTTTTTTATGTTAATTATTAACAGATATATTTTACTGAAATTAAATGCACGTAAGTGTTTAAGACCATCCGCCATACCACTGGCTGGCCTTGCCTCCAACATGCTCTCCAGATCCCATACTTCCATACCCACCATAGGTGCCGCCGCGGGAAGCACTCCACTGCTTCTATCACAGCTCTCAAACATTGGACGACATTGTCTGGGTCAGCGACCATCTGTACAACTCGATCAGTAGATAATGGAGCCAACATCTGATACACCTTGATAACACGCATCTTGTACTTATCACGAAGGTCCTTAATACGTTCACCGCCTCGACCGATTACAGACCCAGCTTGGCTTTCGTGCACTAAGATTCTGAAGTCAATCATGTTTTCGTCTTCCTCATCATCTCGTTCTGGGTCTTCACTTCGTCTTGGGCGGCGTCGAGATCCTTGGGTACCCATTATGCGTTTCGGATCGGAAAGTTTGGCATTCATTATATCCTTCAGCTTCGGGCAAACATCGCGCATGATGCTGCAGATGGCCTGCAGGTCACCTTCGATAGTCATTATCCTATCAGAGAAAAAGCAAGTTAGGGTGGGAAAGAAGGAAGGAAACGAAAATTTTAATCGTATAACGAAGCTCATGACACCCTTCCATTTAGTGACAGTCGTGGAGGGCTCGGAGAACTAGACAACCGTCTGAGGGTTATCACCAAAACTTG-TCTAGATTT-TTACACAATAGAATTCAATGAATAAGTCACTGGGGTTTCCAGTTACAACAGTAACTCATGGGTTAGCTGGTAATTAAGCAGTCAGGAATGACTTTGCAAATGATATCCAAAAAGGGCTTTACAAATACATTAATGAACCAAAAACATGAAAATAATAATTCAGGCAAACTAATTAATCGACCGAATAGACATCAAGGTGACATTAAGTTTCTGGGTTACCCTACCGTTCAGGGCCTCTGCTGTCGGGAATATTCA-GCTTGACG-TTATA-CTGAGACAATAAATGGGATAAAGCAGGGCCGGTTTCAGTGACCCAGAGTCATCAGTTTGAGGATAAGGCAGGCATGTGGTACCAACCCAAACCATTGGGTTATCAGAGGAGATTGACCAGATTCAGCGAGTAAGTGTCCGGAAGGTGGAGGAACCGTAAAGAATATAAAACAAAGAATCGAGTCAGTTGGTGCCAAAATAGCGATTGAGCAAGTCACTAAATGAATTATGAAAAAACAAACCTGTGACCGTATTTTTTTGATATTTTCCCCACCCTTCCC] [+] EMBL CD073754 [TTTTTTTGTTTTACTTTTTTTATGTTAATTATTAACAGATATATTTTACTGAAATTAAATGCACGTAAGTGTTTAAGACCATCCGCCATACCACTGGCTGGCCTTGCCTCCAACATGCTCTCCAGATCCCATACTTCCATACCCACCATAGGTGCCGCCGCGGGAAGCACTCCACTGCTTCTATCACAGCTCTCAAACATTGGACGACATTGTCTGGGTCAGCGACCATCTGTACAACTCGATCAGTAGATAATGGAGCCAACATCTGATACACCTTGATAACACGCATCTTGTACTTATCACGAAGGTCCTTAATACGTTCACCGCCTCGACCGATTACAGACCCAGCTTGGCTTTCGTGCACTAAGATTCTGAAGTCAATCATGTTTTCGTCTTCCTCATCATCTCGTTCTGGGTCTTCACTTCGTCTTGGGCGGCGTCGAGATCCTTGGGTACCCATTATGCGTTTCGGATCGGAAAGTTTGGCATTCATTATATCCTTCAGCTTCGGGCAAACATCGCGCATGATGCTGCAGATGGCCTGCAGGTCACCTTCGATAGTCATTATCCTATCAGAGAAAAAGCAAGTTAGGGTGGGAAAGAAGGAAGGAAACGAAAATTTTAATCGTATAACGAAGCTCATGACACCCTTCCATTTAGTGACAGTCGTGGAGGGCTCGGAG ] [+] EMBL CD152658 [ GTTGGGGTGGGAAAGAAGGAAGGAAACGAAAATTTTAATCGTATAACGAAGCTCATGACACCCTTCCATTTATTGACAGTCGTGGAGGGCTCGGAGAACTAGACAACCGTCTGAGGGTTATCACCAAAACTTG TCTAGATTT TTACACAATAGAATTCAATGAATAAGTCACTGGGGTTTCCAGTTACAACAGTAACTCATGGGTTAGCTGGTAATTAAGCATGCAGGAATGACTGTGCAAATGATATCCAAAAAGGGCTTTACAAATACATTAATGAACCAAAAACATGAAAATAATAATTCAGGCAAACTAATTAATCGACCGAATAGACATCAAGGTGACATTAAGTTTCTGGGTTACCCTAC ] [+] EMBL CD178805 [ TTTTAATCGTATAACGAAGCTCATGACACCCTTCCATTTAGTGACAGTCGTGGAGGGCTCGGAGAACTAGACAACCGTCTGAGGGTT TCACC AAACTGC TCTAGATTT TTACACAATAGAATTCAATGGATAAGTCACTGGGGTTTCCAGTTACAACAGTAACTCATGGGTTAGCTGGTAATTAAGCAGTCAGGAATGACTTTGCAAATGATATCCAAAAAGGGCTTTACAAATACATTAATGAACCAAAAACATGAAAATAATAATTCAGGCAAACTAATTAATCGACCGAATAGACATCAA ] [+] EMBL CD138583 [ GACAACCGTCTGAGGGTTATCACCAGAACTTG CCTAGATTT TTACACAATAGAATTCAATGAATAAGTCACTGGGGTTTCCAGTTACAACAGTAACTCATGGGTTAGCTGGTAATTAAGCAGTCAGGAATGACTTTGCAAATGATATCCAAAAAGGGCTTTACAAATACATTAATGAACCAAAAACATGAAAATAATAATTCAGGCAAACTAATTAATCGACCGAATAGACATCAAGGTGACATTAAGTTTCTGGGTTACCCTACCGTTCAGGGCCTCTGCTGTCGGGAATATTCA GCTTGACG TTATA CTGAGACAATAAATGGGATAAAGCAGGGC ] [-] EMBL CD093414 [ ACTACCGTCTGAGGGTCATCACCGAAACTTGATCTAGATTT TTACACAATAGAATTCAATGAATAAGTCACTGGGATTTCCAGTTACAACAGTAACTCATGGGTTAGCTGGTAATTAAGCAGTCAGGAATGACTTTGCAAATGATATCCAAAAAGGGCTTTACAAATACATTAATGAACCAAAAACATGAAAATAATAATTCAGGCAAACTAATTAATCGACCGAATAGACATCAAGGTGACATTAAGTTTCTGGGTTACCCTACCGTTCAGGGCCTCTGCTGTCGGGAATATTCATGCTTGACGATTATAGCTGAGACAATAAATGGGATAAAGCAGGGCC ] [-] EMBL CD125047 [ ACAACCGTCTGAGGGTTATCACCAAAACTGG TCTAGATTTGTGACACAATAG ATTCAATGAATAAGTCACTGGGGTTTCCAGTTACAACAGTAACTCATGGGTTAGCTGGTAATTAAGCAGTCAGGAATGACTTTGCAAATGATATCCAAAAAGGGCTTTACAAATACATTAATGAACCAAAAACATGAAAATAATAATTCAGGCAAACTAATTAATCGACCGAATAGACATCAAGGTGACATTAAGTTTCTGGGTTACCCTGCCGTTCAGGGCCTCTGCTGTCGGGAATATTCA GCTTGACG TTATA CTGAGACAATAAATGGGATAAAGCAGGGCC ] [-] EMBL CD093423 [ ACAACCGTCTGAGGGTTATCACCAAAACTTG TCTAGATTT TTACACAATAGAATTCAATGAATAAGTCACTGGGGTTTCCAGTTACAACAGTAACTCATGGGTTAGCTGGTAATTAAGCAGTCAGGAATGACTTTGCAAACGATATCCAAAAAGGGCTTTACAAATACATTAATGAACCAAAAACATGAAAATAATAATTCAGGCAAACTAATTAATCGACCGAATAGACATCAAGGTGACATTAAGTTTCTGGGTTACCCTACCGTTCAGGGCCTCTGCTGTCGGGAATATTCA GCTTGACG TTATA CTGAGACAATAAATGGGATAAAGCAGGGCC ] [-] EMBL CD093439 [ ACAACCGTCTGAGGGTTATCACCAAAACTTG TCTAGATTT TTACACAATAGAATTCAATGAATAAGTCGCTGGGGTTTCCAGTTACAACAGTAACTCATGGGTTAGCTGGTAATTAAGCAGTCAGGAATGACTTTGCAAATGATATCCAAAAAGGGCTTTACAAATACATTAATGAACCAAAAACATGAAAATAATAATTCAGGCAAACTAATTAATCGACCGAATAGACATCAAGGTGACATTAAGTTTCTGGGTTACCCTACCGTTCAGGGCCTCTGCTGTCGGGAATATTCA GCTTGACG TTATA CTGAGACAATAAATGGGATAAAGCAGGGCC ] [-] EMBL CD125085 [ ACAACCGTCTGAGGGTTATCACCAAAACTTG TCTAGATTT TTACACAATAGAATTCAATGAATAAGTCACTGGGGTTTCCAGTTACAACAGTAACTCATGGGTTAGCTGGTAATTAAGCAGTCAGGAATGACTTTGCAAATGATATCCAAAAAGGGCTTTACAAATACATTAATGAACCAAAAACATGAAAATAATAATTCAGGCAAACTAATTAATCGACCGAATAGACATCAAGGTGACATTAAGTTTCTGGGTTACCCTACCGTTCAGGGCCTCTGCTGTCGGGAATATTCA GCTTGACG TTATA CTGAGGCAATAAATGGGATAAAGCAGGGCC ] [-] EMBL CD098283 [ CACCAAAACTTG TCTAGATTT TTACACAATAGAATTCAATGAATAAGTCACTGGGGTTTCCAGTTACAACAGTAACTCATGGGTTAGCTGGTAATTAAGCAGTCAGGAATGACTTTGCAAATGATATCCAAAAAGGGCTTTACAAATACATTAATGAACCAAAAACATGAAAATAATAATTCAGGCAAACTAATTAATCGACCGAATAGACATCAAGGTGACATTAAGTTTCTGGGTTACCCTACCGTTCAGGGCCTCTGCTGTCGGGAATACTCA GCTTGACG TTATA CTGAGACA ] [+] EMBL BG930946 [ GTCACTGGGGTTTCCAGTTACAACAGTAACTCATGGGTTAGCTGGTAATTAAGCAGTTAGGAATGACTTTGCAAATGATATCCAAAAAGGGCTTTACAAATACATTAATGAACCAAAAACATGAAAATAATAATTCAGGCGAACTAATTAATCGACCGAATAGACATCAAGGTGACATTAAGTTTCTGGGTTACCCTACCGTTCAGGGCCTCTGCTGTCGGGAATATTCA GCTTGACG TTATA CTGAGACAATAAATGGGATAAAGCAGGGCCGGTTTCAGTGACCC ] [-] EMBL CD179188 [ CAAACTAATTAATCGACCGAATAGACATCAAGGTGACATTAAGTTTCTGGGTTACCCTACCGTTCAGGGCCTCTGCTGTCGGGAATATTCA GCTTGACG TTATA CTGAGACAATAAATGGGATAAAGCAGGGCCGGTTTCAGTGAGCCAGAGTCATCAGTTTGAGGATAAGGCAGGCATGTGGTACCAACCCAAACCATTGGGTTATCAGAGGAGATTGACCAGATTCAGCGAGTAAGTGTCCGGAAGGTGGAGGAACCGTAAAGAATATAAAACAAAGAATCGAGTCAGTTGGTGCCAAAATAGCGATTGAGCAAGTCACTAAATGAATTATGAAAAAACAAACCTGTGACCGTATTTTTTTGATA ] [+] EMBL CD061077 [ GTGGAGGAACCGTAAAGAATATAAAACAAAGAATCGAGTCAGTTGGTGCCAAAATAGCCATTGAGCAAGTCACTAAATGAATTATGAAAAAACAAACCTGTGACCGTATTTTTTTGATATTTTCCCCACCCTTCCC] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||