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Schistosoma mansoni
cluster # 10152 cluster # 10152       Sequences # 14       consensus # 7


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10152#0 length = 727 sequences # 8  
consensus_10152#1 length = 567 sequences # 1  
consensus_10152#2 length = 295 sequences # 1  
consensus_10152#3 length = 291 sequences # 1  
consensus_10152#4 length = 291 sequences # 1  
consensus_10152#5 length = 277 sequences # 1  
consensus_10152#6 length = 230 sequences # 1  

consensusID : consensus_10152#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 727
fasta sequence
                              [ATGATGGAAAAAAACGGGAGATCGAAGAAAACATGTACAAAATCTCCTTGTTCGGCCAAGAGAAGTATAAGGAATGCAAAACAAATGTTAGTGCAACAGTATAGAACTAAATTTCATATTTTCCAGTACAAATATCGCTGCCTCTAGTTTGTGATCTTTGATCAGAAACAGGTTGAAAGTAGATTGTGTCTTCTAATTCTAAACGCTCTTTAATTCGCCTTCCAATGCTTAGGATAGTTTCTTCTTCATTGTC-ACTAGTTAGCC-AAACTGAAAGC-TTGCTACCCCGAGA-CCGTGGTTGGAACACCGCT-CCACATATCTGTCTATCTTCTTCATCCGTATCCCAGTCGGAACCGATCAGAAGCATCAACAATTCATCCCATAAAAAGTCGACGTCTTGTCGTGCAGTAACATTGA-TTAGCCAACGTCCCCCATTTTCATTTTTCGGATCCTCCCACTTCGGCATAATATCAGATTTGAACATATACAAATCTTTGCCATAAGTTATCTCTCTCGGTCTAACCGTATGAGTGAGTACGCTCCAGAAGTCCTCAATAGTGCTGAAAGTTGCCACCTTTTCTAGACATTCATCCCAATCGAGTGCCTTTCTGAACTGGAACAAATAATAAGACCACGAGTCTTGGAGTGGATGTGGACGCGGCTTCTCCTCTTCCTTTTCTTTCTCGTCCTTAACGCGTTGTTCACTCTCAACAGCCGTCATCCAAAACGT]

[-] EMBL CD134973             [ATGATGGAAAAAAACGGGAGGTTGAAGAAAACATGTACAAAATCTCCTTGTTCGGCCAAGAGAAGTATAAGGAATGCAAAACAAATGTTAGTGCAACAGTATAGAACTAAATTTCATATTTTCCAGTACAAATATCGCTGCCTCTAGTTTGTGATCTTTGATCAGAAACAGGTTGAAAGTAGATTGTGTCTTCTAATTCTAAACGCTCTTTAATTCGCCTTCCAATGCTTAGGATAGTTTCTGCTTCATTGTC ACTAGTTAGCC AAACTGAAAGC TTGCTACCCCGAGA CCGTGGTTGGAACACCGCT CCACATATCTGTCTATCTTCTTCATCCGTATCCCAGTCGGAACCGATCAGAAGCATCAACAATTCATCCCATAAAAAGTCGACGTCTTGTCGTGCAGTAACATTGA TTAGTCAACGTCCCCCA TTTCATTgaga                                                                                                                                                                                                                                                                                            ]
[+] EMBL BG930171             [                    ATCGAAGAAAACATGTACAAAATCTCCTTGTTCGGCCAAGAGATGTATAAGGAATGCAAAACAAATGTTAGTGCAACAGTATATAACTAAATTTCATATTTTCCAGTACAAATATGGCTGCCTATAGTTTGTGATCTTTGATCAGAAACAGGTTGAAAGTAGATTGCGTCTTCTAATTCTAAACGCTCTTTAATTCGCCTTCCAATGCTTAGGATAGTTTCTTCTTTATTGTC ACTAGTTAGCC AAACTGAAAGC TTGCTACCCCGAGA CCGTGGTTGGAACACCGGT TCACATAT                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BG930189             [                    ATCGAAGAGAACGTGTACAAAATCTCCTTGTTCGGCCAAGAGAAGTATAAGGAATGCAAAACAAATGTTAGTGCAACAGTATAGAACTAAATTTCATATTTTCCAGTACAAATATCGCTGCCTTTAGTTTGTGATCTTTGATCAGAAACAGGTTGAAAGTAGATTGCGTCTTCTAATTCTAAACGCTATTTAATTCGCCTTCCAATGCTTAGGATAGTTTCTTCTTCATTGGCAACTAG TAGCCAAAACTGAAAGCTTTGCTACCCCGAAACCCGGGGTTGTAACACaatc                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD200249             [                                                                GTATAAGGAATGCAAAACAAATGTTAGTGCAACAGTATAGGACTAAATTTCATATTTTCCAGTACAAATATCGCTGCCTCTAGTTTGTGATCTTTGATCAGAAACAGGTTGAAAGTAGATTGTGTCTTCTAATTCTAAACGCTCTTTAATTCGCCTTCCAATGCTTAGGATAGTTTCTTCTTCATTGTC ACTAGTTAGCC AAACTGAAAGC TTGCTACCCCGAGA CCGT GTTGGAACACCGCT CCACATATCTGTCTATCTTCTTCATCCGTATCCCAGTCGGAACCGATCAGAAGCATCAACAATTCATCCCATAAAAAGTCGACGTCTTGTCGTGCAGTAACATTGA TTAGCCAACGTCCCCCATTTTCATTTTTCGGATCCTCCCACTTCGGCATAATATCAGATTTGAACATATACAAATCTTTGCCATAAGTTATC                                                                                                                                                                                                                             ]
[-] EMBL CD078963             [                                                                                                                                     ATCGCTGCCTCTAGTNTGTGATCTTTGATCAGAAACAGGTTGAAAGTAGATTGTGTCTTCTAATTCTAAACGCTCTNTAATTCGCCTTCCAATGCTTAGGATAGTTTCTTCTTCATTGTC ACTAGTTAGCC AAACTGAAAGC TTGCTACCCCGAGA CCGTGGTTGGAACACCGCT CCACATATCTGTCTATCTTCTTCATCCGTATCCCAGTCGGAACCGATCAGAAGCATCAACAATTCATCCCATAAAAAGTCGACGTCTTGTCGTGCAGTAACATTGA TTAGCCAACGTCCCCCATTTTCATTTTTCGGATCCTCCCACTTCGGCATAATATCAGATTTGAACATATACAAATCTTTGCCATAAGTTATCTCTCTCGGTCTAACCGTATGAGTGAGTACGCTCCAGAAGTCCTCAATAGTGCTGAAAGTTGCCACCTTTTCTAGACATTCATCCCAATCGAGTGCCTTTCTGAACTGGAACAAATAATAAGACCACGAGTCTTGGAGTGGATGTGGACGCGGCTTCTCCTCTTCCTTTTCTTTCTCGTCCTTAACGCG                                 ]
[-] EMBL CD149029             [                                                                                                                                                                                                                          CTTCCAATGCTTAGGATAGTTTCTTCTTCATTGTC ACTAGTTAGCC AAACTGANAGC TTGCTACCCCGAGA CCGTGGTTGGAACACCGCT CCACATATCTGTCTATCTTCTCCATCCGTATCCCAGTCGGAACCGATCAGAAGCATCAACAATTCATCCCATAAAAAGTCGACGTCTTGTCGTGCAGTAACATTGA TTAGCCAACGTCCCCCATTTTCATTTTTCGGATCCTCCCACTTCGGCATAATATCAGATTTGAACATATACAAATCTTTGCCATAAGTTATCTCTCTCGGTCTAACCGTATGAGTGAGTACGCTCCAGAAGTCCTCAATAGTGCTGAAAGTTGCCACCTTTTCTAGACATTCATCCCAATCGAGTGCCTTTCTGAACTGGAACAAATAATAAGACCA                                                                                                ]
[-] EMBL CD111797             [                                                                                                                                                                                                                                                                                                            nGGACCA CGCTNCCACATATCNGTCTATCTTCTTCATCCGTATCCCAGTCGGACCCGATCAGAAGCATCANC ATTCATCCCATAAAAAGTCGACGTCTNGTCGTGCAGTAACA TGATTTAGCCAACGTCCCCCATTTTCA TTTTCGGATCCTCCCACTTCGGCATAATATCAGATTTGAATATATACAAATCTTTGCCATAAGTTATCTCTCTCGGTCTAACCGTATGAGTGAGTACGCTCCAGAAGTCCTCAATAGTGCTGAAAGTTGCCACCTTTTCTAGACATTCATCCCAATCGAGTGCCTTTCTGAACTGGAACAAATAATAAGACCACGAGTCTTGGAGTGGATGTGGACGCGGCTTCTCCTCTTCCTTTTCTTTCTCGTCCTTAACGCGTTGTTCACTCTCAACAGCCGTCATCCAAAACGT]
[+] EMBL CD067994             [                                                                                                                                                                                                                                                                                                                                                                                                        CGACGTCTTGTCGTGCAGTAACATTGA TTAGCCAACGTCCCCCATTTTCATTTTTCGGATCCTCCCACTTCGGCATAATATCAGATTTGAACATATACAAATCTTTGCCATAAGTTATCTCTCTCGGTCTAACCGTATGAGTGAGTACGCTCCAGAAGTCCTCAATAGTGCTGAAAGTTGCCACCTTTTCTAGACATTCATCCCAATCGAGTGCCTTTCTGAACTGGAACAAATAATAAGACC                                                                                                 ]


>consensus_10152#0 ATGATGGAAAAAAACGGGAGATCGAAGAAAACATGTACAAAATCTCCTTGTTCGGCCAAG AGAAGTATAAGGAATGCAAAACAAATGTTAGTGCAACAGTATAGAACTAAATTTCATATT TTCCAGTACAAATATCGCTGCCTCTAGTTTGTGATCTTTGATCAGAAACAGGTTGAAAGT AGATTGTGTCTTCTAATTCTAAACGCTCTTTAATTCGCCTTCCAATGCTTAGGATAGTTT CTTCTTCATTGTCACTAGTTAGCCAAACTGAAAGCTTGCTACCCCGAGACCGTGGTTGGA ACACCGCTCCACATATCTGTCTATCTTCTTCATCCGTATCCCAGTCGGAACCGATCAGAA GCATCAACAATTCATCCCATAAAAAGTCGACGTCTTGTCGTGCAGTAACATTGATTAGCC AACGTCCCCCATTTTCATTTTTCGGATCCTCCCACTTCGGCATAATATCAGATTTGAACA TATACAAATCTTTGCCATAAGTTATCTCTCTCGGTCTAACCGTATGAGTGAGTACGCTCC AGAAGTCCTCAATAGTGCTGAAAGTTGCCACCTTTTCTAGACATTCATCCCAATCGAGTG CCTTTCTGAACTGGAACAAATAATAAGACCACGAGTCTTGGAGTGGATGTGGACGCGGCT TCTCCTCTTCCTTTTCTTTCTCGTCCTTAACGCGTTGTTCACTCTCAACAGCCGTCATCC AAAACGT



consensusID : consensus_10152#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 567
fasta sequence
                              [CTGTCGAATGCTTTTTCACAATCAGGGAAGTTGATGTATAGTGATGAGTTACATTCAAACAATTCCTAAACAGTAATCCGCAGCGGTGCAATCGATTCTTACGAAAGCCAGCTCGCTTATCATTGAGTTAAAAGTCTACTGGATCTTTCATTAAGTTCAGCAACATTTGAAAACTGCCTGTAATACCTTTCTACTTTTCACACTCACTCAAGTCTTTCATCGGTATCTTGAAGAGGTATGCCTTTTGCCTGTCTGTTGGTACTTGTTCTTCCTCTCAAATCTATCTAAGGAGAACGTAGATTATCATTGAAACCGCCTCGATGTATGACTTTAATACTTCAGCCGGTATGCTCTCTAGTCCTGTTGCTTTACTATCCCAGATTTGTCAGAAGGCGTTGTTAGTTTCTATTTTGATGCATTTTACTGAGTTTTGTTTTCTAAGAAGTTTATCTCTTTCGTTTAAATGTTGACAATTTTTACATAGAATGTTTATATCTTCCATTTTCAGTTTATGGGATGAAATTGTTGATGCTTTCTGATCGGTTCCGACTGGGATACGGATGAAGA]

[+] EMBL BF936739             [CTGTCGAATGCTTTTTCACAATCAGGGAAGTTGATGTATAGTGATGAGTTACATTCAAACAATTCCTAAACAGTAATCCGCAGCGGTGCAATCGATTCTTACGAAAGCCAGCTCGCTTATCATTGAGTTAAAAGTCTACTGGATCTTTCATTAAGTTCAGCAACATTTGAAAACTGCCTGTAATACCTTTCTACTTTTCACACTCACTCAAGTCTTTCATCGGTATCTTGAAGAGGTATGCCTTTTGCCTGTCTGTTGGTACTTGTTCTTCCTCTCAAATCTATCTAAGGAGAACGTAGATTATCATTGAAACCGCCTCGATGTATGACTTTAATACTTCAGCCGGTATGCTCTCTAGTCCTGTTGCTTTACTATCCCAGATTTGTCAGAAGGCGTTGTTAGTTTCTATTTTGATGCATTTTACTGAGTTTTGTTTTCTAAGAAGTTTATCTCTTTCGTTTAAATGTTGACAATTTTTACATAGAATGTTTATATCTTCCATTTTCAGTTTATGGGATGAAATTGTTGATGCTTTCTGATCGGTTCCGACTGGGATACGGATGAAGA]


>consensus_10152#1 CTGTCGAATGCTTTTTCACAATCAGGGAAGTTGATGTATAGTGATGAGTTACATTCAAAC AATTCCTAAACAGTAATCCGCAGCGGTGCAATCGATTCTTACGAAAGCCAGCTCGCTTAT CATTGAGTTAAAAGTCTACTGGATCTTTCATTAAGTTCAGCAACATTTGAAAACTGCCTG TAATACCTTTCTACTTTTCACACTCACTCAAGTCTTTCATCGGTATCTTGAAGAGGTATG CCTTTTGCCTGTCTGTTGGTACTTGTTCTTCCTCTCAAATCTATCTAAGGAGAACGTAGA TTATCATTGAAACCGCCTCGATGTATGACTTTAATACTTCAGCCGGTATGCTCTCTAGTC CTGTTGCTTTACTATCCCAGATTTGTCAGAAGGCGTTGTTAGTTTCTATTTTGATGCATT TTACTGAGTTTTGTTTTCTAAGAAGTTTATCTCTTTCGTTTAAATGTTGACAATTTTTAC ATAGAATGTTTATATCTTCCATTTTCAGTTTATGGGATGAAATTGTTGATGCTTTCTGAT CGGTTCCGACTGGGATACGGATGAAGA



consensusID : consensus_10152#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 295
fasta sequence
                              [TGGGGGATCGAAGAGAACATGTACAAAATCTCCTTGTTCCGCCAACAGAAGTATAAGGAATGCAAAACAAATGTTAGTGCAACAGTATAGAACTAAATTTCATATTTTCCAATACAAATATCGCTGCCTCTAGTTTGTGATCTTTGATCAGAAACAGGTTGAAAGTAGATTGCGTTTTCTAATTCTAAACGCTCTTTAATTCGCCTTCCAATGCTTAAGGATAGTTCTTCTTATATGGCACTAATTAGTCAAACTGGAGACTTGTATCCCCATTTCCCTGGAGTAAATACATCTA]

[+] EMBL BG930183             [TGGGGGATCGAAGAGAACATGTACAAAATCTCCTTGTTCCGCCAACAGAAGTATAAGGAATGCAAAACAAATGTTAGTGCAACAGTATAGAACTAAATTTCATATTTTCCAATACAAATATCGCTGCCTCTAGTTTGTGATCTTTGATCAGAAACAGGTTGAAAGTAGATTGCGTTTTCTAATTCTAAACGCTCTTTAATTCGCCTTCCAATGCTTAAGGATAGTTCTTCTTATATGGCACTAATTAGTCAAACTGGAGACTTGTATCCCCATTTCCCTGGAGTAAATACATCTA]


>consensus_10152#2 TGGGGGATCGAAGAGAACATGTACAAAATCTCCTTGTTCCGCCAACAGAAGTATAAGGAA TGCAAAACAAATGTTAGTGCAACAGTATAGAACTAAATTTCATATTTTCCAATACAAATA TCGCTGCCTCTAGTTTGTGATCTTTGATCAGAAACAGGTTGAAAGTAGATTGCGTTTTCT AATTCTAAACGCTCTTTAATTCGCCTTCCAATGCTTAAGGATAGTTCTTCTTATATGGCA CTAATTAGTCAAACTGGAGACTTGTATCCCCATTTCCCTGGAGTAAATACATCTA



consensusID : consensus_10152#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 291
fasta sequence
                              [ATCGGAGAGGACATGTTCAAAATCTCCTTGTTCGGCCAAGAGAAGTATAAGGAATGCAAAACAAATGTTAGTGCAACAGTATAGAACTAAATTTCATATTTTCCAGTACAAATATCGCTGCCTTTAATTTGTGATCTTTGATCAGAAACAGGTTGAAAGTAGATTGCGTCTTCTAATTCTAAAAGCTATTTAATTCGACTTACAAAGCTTAGGATATTTATTTCTTTATGGCCATTATTAACCAACTTGAAGGTTGGTTCCCAACTAACGGGGTTGGAACCTCCGTTTAAT]

[+] EMBL BG930192             [ATCGGAGAGGACATGTTCAAAATCTCCTTGTTCGGCCAAGAGAAGTATAAGGAATGCAAAACAAATGTTAGTGCAACAGTATAGAACTAAATTTCATATTTTCCAGTACAAATATCGCTGCCTTTAATTTGTGATCTTTGATCAGAAACAGGTTGAAAGTAGATTGCGTCTTCTAATTCTAAAAGCTATTTAATTCGACTTACAAAGCTTAGGATATTTATTTCTTTATGGCCATTATTAACCAACTTGAAGGTTGGTTCCCAACTAACGGGGTTGGAACCTCCGTTTAAT]


>consensus_10152#3 ATCGGAGAGGACATGTTCAAAATCTCCTTGTTCGGCCAAGAGAAGTATAAGGAATGCAAA ACAAATGTTAGTGCAACAGTATAGAACTAAATTTCATATTTTCCAGTACAAATATCGCTG CCTTTAATTTGTGATCTTTGATCAGAAACAGGTTGAAAGTAGATTGCGTCTTCTAATTCT AAAAGCTATTTAATTCGACTTACAAAGCTTAGGATATTTATTTCTTTATGGCCATTATTA ACCAACTTGAAGGTTGGTTCCCAACTAACGGGGTTGGAACCTCCGTTTAAT



consensusID : consensus_10152#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 291
fasta sequence
                              [ATCGGGGAGGTCATGATCTAAATCTCCTTGCTCGGCCAAGAGAAGTATAAAGAATGCAAAACAAATGTTATTGCAACAATATATAACTAAAAATAATATTTTCCAGATCAAATATAGCTGACTCTAAATTGCGAACTTTGATCAGAAACAGAGAGAAAGTAGATAAGTTTATCTAATTCTAAATACATTTTAATTTATACTTCACAAACATAGGATACATCTTTATTAAAGTAATACGTATAGACAACAGAAAATTGTATCCCCAGAACATTGATAATAACACAATTAAAA]

[+] EMBL BG930193             [ATCGGGGAGGTCATGATCTAAATCTCCTTGCTCGGCCAAGAGAAGTATAAAGAATGCAAAACAAATGTTATTGCAACAATATATAACTAAAAATAATATTTTCCAGATCAAATATAGCTGACTCTAAATTGCGAACTTTGATCAGAAACAGAGAGAAAGTAGATAAGTTTATCTAATTCTAAATACATTTTAATTTATACTTCACAAACATAGGATACATCTTTATTAAAGTAATACGTATAGACAACAGAAAATTGTATCCCCAGAACATTGATAATAACACAATTAAAA]


>consensus_10152#4 ATCGGGGAGGTCATGATCTAAATCTCCTTGCTCGGCCAAGAGAAGTATAAAGAATGCAAA ACAAATGTTATTGCAACAATATATAACTAAAAATAATATTTTCCAGATCAAATATAGCTG ACTCTAAATTGCGAACTTTGATCAGAAACAGAGAGAAAGTAGATAAGTTTATCTAATTCT AAATACATTTTAATTTATACTTCACAAACATAGGATACATCTTTATTAAAGTAATACGTA TAGACAACAGAAAATTGTATCCCCAGAACATTGATAATAACACAATTAAAA



consensusID : consensus_10152#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 277
fasta sequence
                              [ATCGAAGAAAACATGTACAAAATCTCCTTGTTCGGCCAAGAGAAGTATAAGGAATGCAAAACAAATGTTAGTGCAACAGTATAGAACTAAATTTCATATTTTCCAGTACAAATATTGCTGGCTTTAATTTGGGATCTTTGATCAAAAACAAGGTTGAAAGTAATTGGCTCTTCTAATTTTAAACGCTTTTTAATTCGCTTTCATGCTTAGGAAAGTTCTTTTTAATTGGCATTATTAGCCAAATTGAAGCTTGTTCCCCTGCACCAGTTTATTACAT]

[+] EMBL BG930190             [ATCGAAGAAAACATGTACAAAATCTCCTTGTTCGGCCAAGAGAAGTATAAGGAATGCAAAACAAATGTTAGTGCAACAGTATAGAACTAAATTTCATATTTTCCAGTACAAATATTGCTGGCTTTAATTTGGGATCTTTGATCAAAAACAAGGTTGAAAGTAATTGGCTCTTCTAATTTTAAACGCTTTTTAATTCGCTTTCATGCTTAGGAAAGTTCTTTTTAATTGGCATTATTAGCCAAATTGAAGCTTGTTCCCCTGCACCAGTTTATTACAT]


>consensus_10152#5 ATCGAAGAAAACATGTACAAAATCTCCTTGTTCGGCCAAGAGAAGTATAAGGAATGCAAA ACAAATGTTAGTGCAACAGTATAGAACTAAATTTCATATTTTCCAGTACAAATATTGCTG GCTTTAATTTGGGATCTTTGATCAAAAACAAGGTTGAAAGTAATTGGCTCTTCTAATTTT AAACGCTTTTTAATTCGCTTTCATGCTTAGGAAAGTTCTTTTTAATTGGCATTATTAGCC AAATTGAAGCTTGTTCCCCTGCACCAGTTTATTACAT



consensusID : consensus_10152#6
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 230
fasta sequence
                              [GGATCCTCCCACTTCGGCATAATATCAGATTTGAACATATACAAATCTTTGCCATAAGTTATCTCTCTCGGTCTAACCGTATGAGTGAGTACGCTCCAGAAGTCCTCAATAGTGCTTGAAAGTTGCCCCCTTTTCTAGACATTCATCCCAATCGAGTGCCTTTCTGAACTGGAACAAATAATAAGACCACCTAAACAACCATCTAACTAAGATTTTATTTTTTATTACGA]

[-] EMBL CD171307             [GGATCCTCCCACTTCGGCATAATATCAGATTTGAACATATACAAATCTTTGCCATAAGTTATCTCTCTCGGTCTAACCGTATGAGTGAGTACGCTCCAGAAGTCCTCAATAGTGCTTGAAAGTTGCCCCCTTTTCTAGACATTCATCCCAATCGAGTGCCTTTCTGAACTGGAACAAATAATAAGACCACCTAAACAACCATCTAACTAAGATTTTATTTTTTATTACGA]


>consensus_10152#6 GGATCCTCCCACTTCGGCATAATATCAGATTTGAACATATACAAATCTTTGCCATAAGTT ATCTCTCTCGGTCTAACCGTATGAGTGAGTACGCTCCAGAAGTCCTCAATAGTGCTTGAA AGTTGCCCCCTTTTCTAGACATTCATCCCAATCGAGTGCCTTTCTGAACTGGAACAAATA ATAAGACCACCTAAACAACCATCTAACTAAGATTTTATTTTTTATTACGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10152#0      ATGATGGAAAAAAACGGGAGATCGAAGAAAACATGTACAAAATCTCCTTGTTCGGCCAAG 60
consensus_10152#6      ------------------------------------------------------------
consensus_10152#3      ------------------------------------------------------------
consensus_10152#5      ------------------------------------------------------------
consensus_10152#2      ------------------------------------------------------------
consensus_10152#4      ------------------------------------------------------------
consensus_10152#1      ------------------------------------------------------------
                                                                                   

consensus_10152#0      AGAAGTATAAGGAATGCAAAACAAATGTTAGTGCAACAGTATAGAACTAAATTTCATATT 120
consensus_10152#6      ------------------------------------------------------------
consensus_10152#3      ------------------------------------------------------------
consensus_10152#5      ------------------------------------------------------------
consensus_10152#2      ------------------------------------------------------------
consensus_10152#4      ------------------------------------------------------------
consensus_10152#1      ------------------------------------------------------------
                                                                                   

consensus_10152#0      TTCCAGTACAAATATCGCTGCCTCTAGTTTGTGATCTTTGATCAGAAACAGGTTGAAAGT 180
consensus_10152#6      ------------------------------------------------------------
consensus_10152#3      ------------------------------------------------------------
consensus_10152#5      ------------------------------------------------------------
consensus_10152#2      ------------------------------------------------------------
consensus_10152#4      ------------------------------------------------------------
consensus_10152#1      ------------------------------------------------------------
                                                                                   

consensus_10152#0      AGATTGTGTCTTCTAATTCTAAACGCTCTTTAATTCGCCTTCCAATGCTTAGGATAGTTT 240
consensus_10152#6      ------------------------------------------------------------
consensus_10152#3      ------------------------------------------------------------
consensus_10152#5      ------------------------------------------------------------
consensus_10152#2      ------------------------------------------------------------
consensus_10152#4      ------------------------------------------------------------
consensus_10152#1      ------------------------------------------------------------
                                                                                   

consensus_10152#0      CTTCTTCATTGTCACTAGTTAGCCAAACTGAAAGCTTGCTACCCCGAGACCGTGGTTGGA 300
consensus_10152#6      ------------------------------------------------------------
consensus_10152#3      ------------------------------------------------------------
consensus_10152#5      ------------------------------------------------------------
consensus_10152#2      ------------------------------------------------------------
consensus_10152#4      ------------------------------------------------------------
consensus_10152#1      ------------CTGTCGAATGCTTTTTCACAATCAGGGAAGTTGATGTATAGTGATGAG 48
                                                                                   

consensus_10152#0      ACACCGCTCCACATATCTGTCTATCTTCTTCATCCGTATCCCAGTCGGAACCGATCAGAA 360
consensus_10152#6      ------------------------------------------------------------
consensus_10152#3      ------------------------------------------------------------
consensus_10152#5      ------------------------------------------------------------
consensus_10152#2      ------------------------------------------------------------
consensus_10152#4      ------------------------------------------------------------
consensus_10152#1      TTACATTCAAACAATTCCTAAACAGTAATCCGCAGCGGTGCAATCGATTCTTACGAAAGC 108
                                                                                   

consensus_10152#0      GCATCAACAATTCATCCCATAAAAAGTCGACGTCTTGTCGTGCAGTAACATTGATTAGCC 420
consensus_10152#6      ------------------------------------------------------------
consensus_10152#3      ------------------------------------------------------------
consensus_10152#5      ------------------------------------------------------------
consensus_10152#2      ----------------------------------------------------------TG 2
consensus_10152#4      ------------------------------------------------------------
consensus_10152#1      CAGCTCGCTTATCATTGAGTTAAAAGTCTACTGGATCTTTCATTAAGTTCAGCAACATTT 168
                                                                                   

consensus_10152#0      AACGTCCCCCATTTTCATTTTTCGGATCCTCCCACTTCGGCAT----AATATCAG-ATTT 475
consensus_10152#6      -----------------------GGATCCTCCCACTTCGGCAT----AATATCAG-ATTT 32
consensus_10152#3      ----ATCGGAGAGGACATGTTCAAAATCTCCTTGTTCGGCCAAGAGAAGTATAAG-GAAT 55
consensus_10152#5      ----ATCGAAGAAAACATGTACAAAATCTCCTTGTTCGGCCAAGAGAAGTATAAG-GAAT 55
consensus_10152#2      GGGGATCGAAGAGAACATGTACAAAATCTCCTTGTTCCGCCAACAGAAGTATAAG-GAAT 61
consensus_10152#4      ----ATCGGGGAGGTCATGATCTAAATCTCCTTGCTCGGCCAAGAGAAGTATAAA-GAAT 55
consensus_10152#1      GAAAACTGCCTGTAATACCTTTCTACTTTTCACACTCACTCAAGTCTTTCATCGGTATCT 228
                                                 *   *    *    **        **       *

consensus_10152#0      G---AACATAT---------ACAAATCTTTGCCATAAGTTATCTCTCTCGGTCTAACCGT 523
consensus_10152#6      G---AACATAT---------ACAAATCTTTGCCATAAGTTATCTCTCTCGGTCTAACCGT 80
consensus_10152#3      GCAAAACAAATGTTAGTGCAACAGTATAGAACTAAATTTCATATTTTCCAGTACAA--AT 113
consensus_10152#5      GCAAAACAAATGTTAGTGCAACAGTATAGAACTAAATTTCATATTTTCCAGTACAA--AT 113
consensus_10152#2      GCAAAACAAATGTTAGTGCAACAGTATAGAACTAAATTTCATATTTTCCAATACAA--AT 119
consensus_10152#4      GCAAAACAAATGTTATTGCAACAATATATAACTAAAAATAATATTTTCCAGATCAA--AT 113
consensus_10152#1      TGAAGAGGTATGCC-TTTTGCCTGTCTGTTGGTACTTGTTCTTCCTCTCAAATCTATCTA 287
                            *   **          *           *    *  *   *  *      *    

consensus_10152#0      ATGAGTGAGTACGCT-CCAGAAGTCCTCAATAGT-----GCT-GAAAGTT-GCCACCTTT 575
consensus_10152#6      ATGAGTGAGTACGCT-CCAGAAGTCCTCAATAGT-----GCTTGAAAGTT-GCCCCCTTT 133
consensus_10152#3      ATCGCTGCCTTTAAT-TTGTGATCTTTGATCAGAAACA-GGTTGAAAGTAGATTGCGTCT 171
consensus_10152#5      ATTGCTGGCTTTAAT-TTGGGATCTTTGATCAAAAACAAGGTTGAAAGTA-ATTGGCTCT 171
consensus_10152#2      ATCGCTGCCTCTAGT-TTGTGATCTTTGATCAGAAACA-GGTTGAAAGTAGATTGCGTTT 177
consensus_10152#4      ATAGCTGACTCTAAA-TTGCGAACTTTGATCAGAAACA-GAGAGAAAGTAGATAAGTTTA 171
consensus_10152#1      AGGAGAACGTAGATTATCATTGAAACCGCCTCGATGTATGACTTTAA-TACTTCAGCCGG 346
                       *        *                             *     ** *           

consensus_10152#0      TCTAGACATTCATCCCAATCGAGTGCCTTTCTGAACTGGAACAAATAATAAGACCACGAG 635
consensus_10152#6      TCTAGACATTCATCCCAATCGAGTGCCTTTCTGAACTGGAACAAATAATAAGACCAC--- 190
consensus_10152#3      TCTAATTCTAAAAGCTATTTAATTCG-ACTTACAAAGCTTA-GGATATTTATTTCTTTAT 229
consensus_10152#5      TCTAATTTTAAACGCTTTTTAATTCG-CTTTC--ATGCTTA-GGAAAGTTCTTT-TTAAT 226
consensus_10152#2      TCTAATTCTAAACGCTCTTTAATTCG-CCTTCCAATGCTTAAGGATAGTTCTTCTTATAT 236
consensus_10152#4      TCTAATTCTAAATACATTTTAATTTATACTTCACAAACATA-GGATACATCTTTATTAA- 229
consensus_10152#1      TATGCTCTCTAGTCCTGTTGCTTTACTATCCCAGATTTGTCAGAAGGCGTTGTTAGTTTC 406
                       * *           *   *    *          *         *               

consensus_10152#0      TCTTGGAGTGGATGTGGACGCGGCTTCTCCTCTTCCTTTTCTTTCTCGTCCTTAACGCGT 695
consensus_10152#6      -CTAAACAACCATCTAACTAAGATTTTATTTTTTATTACGA------------------- 230
consensus_10152#3      GGCCATTATTAACCAACTTGAAG-GTTGGTTCCCAACTAAC--GGGGTTGGAACCTCCGT 286
consensus_10152#5      TGGCATTATTAGCCAAATTGAAG-CTTGTTCCCCTGC--AC--CAGTTTATTACAT---- 277
consensus_10152#2      GGCACTAATTAGTCAAACTGGAGACTTGTATCCCCATTTCCCTGGAGTAAATACATCTA- 295
consensus_10152#4      AGTAATACGTATAGACAACAGAAAATTGTATCCCCAGAACATTGATAATAACACAATTAA 289
consensus_10152#1      TATTTTGATGCATTTTACTGAGT-TTTGTTTTCTAAGAAGTTTATCTCTTTCGTTTAAAT 465
                                                *                                  

consensus_10152#0      TGTTCACTCTCAACAGCCGTCATCCAAAACGT---------------------------- 727
consensus_10152#6      ------------------------------------------------------------
consensus_10152#3      TTAAT------------------------------------------------------- 291
consensus_10152#5      ------------------------------------------------------------
consensus_10152#2      ------------------------------------------------------------
consensus_10152#4      AA---------------------------------------------------------- 291
consensus_10152#1      GTTGACAATTTTTACATAGAATGTTTATATCTTCCATTTTCAGTTTATGGGATGAAATTG 525
                                                                                   

consensus_10152#0      ------------------------------------------
consensus_10152#6      ------------------------------------------
consensus_10152#3      ------------------------------------------
consensus_10152#5      ------------------------------------------
consensus_10152#2      ------------------------------------------
consensus_10152#4      ------------------------------------------
consensus_10152#1      TTGATGCTTTCTGATCGGTTCCGACTGGGATACGGATGAAGA 567
                                                                 




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)