These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10209#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 1259 fasta sequence [CCCCCCCCTCCGAATCGCACGAGGCTCGAGTTTTTTTTTTTTTTAAACAAGAAAGAAAATATTATTATTTCTTATAAATCGTCGCGCCCTTTTGAACAT-CCAACCCCGCGGACACAATACCGGCAGTCGTAACCTCTCCTCCATGAATATTATTACATTTAACAATGTATGTATGTTATATAACAAAATAATAGTAGCAATAGTAAGTATAAAGCAAGAAGTCTTTCATAAGAGAAGAAGAAAGTCAGCAATGTGGAAAATAGCTTTTAAAAGAAAAGACAATAGAGACAGAGATTGTATGGAAGGTTCTTGGTGAGATAAAATGGAAGACATTTTCATTACATACATCTATCCATATATATGGCGTACATGTGTGTGTGTAATGTGAGAAGAATATACTACTTAAAAAGAAGGTAAAGAATTACTCATTTGGATCACAGACTATTCTGTTTATAGTCGGGTTTC-TTTTCAAACAGATATATCTGAACTAAATGATGAAGATACTACTACTATTATTACTACTGGTACTAATATGAGGAAAGCACACAAAATGTACCGCACATATACATATATGCATTACCGTCAGTATACTGTTTAAAGCACAGAAAATATAGCACGGTAAGAACAAGCGGAAGGGTAGAAACAATCTCCTT-CTCTCTGTCTTTCTCCTTCAAAAAACCCCCCACAACTAGGGGAGATAAAACGAACAATACAAAAAGGGGGCAAGTTAGTCAAGAGAAATTAAAAATGAATCACAACTTTATCATTGGTACGAATTAGTTTATAAATCACAATATGTATCACTACTATTGTGTT-AGTAGTAATGAAATTGGTGAGAGAATACAAAACAGGTAAATATTTTTTGCTCTTCTATTTCTCAATCGAATTTAAAAGATTTTAAAAAAACACACATAGAAACTGATCCAAGTTGAAAGAATAGTTTTAATAATTTCTTGGCGCTGCAGGAGCTACTCGATAAGGTACTTGATTACGGTAATTGTCGTTGAGGTTATTACTGTTATTCACACTACTATTAATACTACCAACACGATAAGTTTTAGGACCATAATATGATTTCGGAACAGGAACACTTCCAATATCAGGAAAAGTGAAACGACTTTCAAAACGACGAACAAGACTAGCGATATTATTATTATCATCATTATAATTATTCATTGGAGATAATGATGATGGTTGTTGAGGAGGTGGCGGTGGAGGCGGCGGCGGCGGTGTTGGATGTGCCCGTGAATTCGCCCCTC] [-] EMBL AI820479 [CCCCCCCCTCCGAATCGCACGAGGCTCGAGTTTTTTTTTTTTTTAAACAAGAAAGAAAATATTATTATTTCTTATAAATCGTCGCGCCC TTTGAACATACCAACCCCCCGGACACAATACCGGCAGTCGTAACCTCTCCTCCATGAATATTATTACATTTAACAATGTATGTATGTTATATAACAAAATAATAGTAGCAATAGTAAGTATAAAGCAAGAAGTCTTTCATAAGAGAAGAAGAAAGTCAGCAATGTGGAAAATAGCTTTTAAAAGAAAAGACAATAGAGACAGAGATTGTATGGAAGGTTCTTGGTGAGATAAAATGGAAGACATTTTCATTACATACATCTATCCATATATATGGCGTACATGTGTGTGTGTAATGTGAGAAGAATATACTACTTAAAAAGAAGGTAAAGAATTACTCATTTGGATCACAGACTATTCTGTTTATAGTCGGGTTTCGATTTCAAACAGATA ] [+] EMBL CD074185 [ AGAAAATATTATTATTTTTTATAAATCGTCGCGCCCTTTTGAACAT CCAACCCCGCGGACACAATACCGGCAGTCGTAACCTCTCCTCCATGAATATTATTACATTTAACAATGTATGTATGTTATATAACAAAATAATAGTAGCAATAGTAAGTATAAAGCAAGAAGTCTTTCATAAGAGAAGAAGAAAGTCAGCAATGTGGAAAATAGCTTTTAAAAGAAAAGACAATAGAGACAGAGATTGTATGGAAGGTTCTTGGTGAGATAAAATGGAAGACATTTTCATTACATACATCTATCCATATATATGGCGTACATGTGTGTGTGTAATGTGAGAAGAATATACTACTTAAAAAGAAGGTAAAGAATTACTCATTTGGATCACAGACTATTCTGTTTATAGTCGGGTTTC TTTTCAAACAGATATATCTGAACTAAATGATGAAGATACTACTACTATTATTACTACTGGTACTAATATGAGGAAAGCACACAAAATGTACCGCACATATACATATATGCATTACCGTCAGTATACTGTTTAAAGCACAGAAAATATAGCACGGTAAGAACAAGCGGAAGGGTAGAAACAATCTCCTT CTCTCTGTCTTTCTCCTTCAAAAAACCCCCCACAACTAGGGGAGATAAAAC ] [+] EMBL AI976056 [ AGAAAATATTATTATTTCTTATAAATCGTCGCGCCCTTTTGAACAT CCAACCCCGCGGACACAATACCGGAAGTCGTAACCTCTCCTCCATGAATATTATTACATTTAACAATGTATGTATGTTATATAACAAAATAATAGTAGCAATAGTAAGTATAAAGCAAGAAGTCTTTCATAAGAGAAGAAGAAAGTCAGCAATGTGGAAAATAGCTTTTAAAAGAAAAGACAATAGAGACAGAGATTGTTTGGAAGGTTCTTGGTGAGATAAAATGGAAGACATTTTCATTACATACATCTATCCATATATATGGCGTACATGTGTGTGTGTAATGTGAGAAGAATATACTACTTAAAAAGAAGGTAAAGAATTACTCATTTGGATCACAGACTATTCTGTTTATAGTCGGGTTTC TTTTCAAACAGATATATCTGAACTAAATGATGAAGATACTACTACTATTATTACTACTGGTACTAATATGAGGAAAGCACACAAAATGTACCGCACATATA ] [-] EMBL AI976139 [ TTTTAAAAGAAAAGCCAATAGAGCCAGAGATTGTATGGAAGGTTCTTGGTGAGATAAAATGNAAGACATTTTCATTACATACATCTATCCATATATATGGCGTACATGTGTGTGTGTAATGTGAGAAGAATATACTACTTAAAAAGAAGGTAAAGAATTACTCATTTGGATCACAGACTATTCTGTTTATAGTCGGGTTTC TTTTCAAACAGATATATCTGAACTAAATGATGAAGATACTACTACTATTATTACTACTGGTACTAATATGAGGAAAGCACACAAAATGTACCGCACATATACATATATGCATTACCGTCAGTATACTGTTTAAAGCACAGAAAATATAGCACGGTAAGAACAAGCGGAAGGGTAGAAACAATCTCCTT CTCTCTGTCTTTCTCCTTCAAAAAACCCCCCACAACTAGGGGAGATAAAACGAACAATACAAAAAGGGGGCAAGTTAGTCAAGAGAAATTAAAAATGAATCACAACTTTATCATTGGTACGAATTAGTTTATAAATCACAATATGTATCACTACTATTGTGTT AGTAGTAATGAAATTGGTGAGAGAATACAAAACAG ] [-] EMBL AI977743 [ AGATAAAATGGAAGACATTTTCATTACATACATCTATCCATATATATGGCGTACATGTGTGTGTGTAATGTGAGAAGAATATACTACTTATAAAGAAGGTAAAGAATTACTCATTTGGATCGCAGACTATTCTGTTTATAGTCGGGTTTC TTTTCAAACAGATATATCTGAACTAAATGATGAAGATGCTACTACTATTATTACTAGTGGTAGTAATATGAGGAAAGCTCACAAAATGTACCGCACATATACATATATGCATTACCGTCAGTATACTGTTTAAAGCACAGAAAATATAGCTCGGTAAGAACAAGCGGAAGGGTAGAAACAATCTCCTT CTCTCTGTCTTTCTCCTTCAAAAAACCCCCCACAACTAGGGGAGATAAAACGATCAATACAAAAAGGGGGCAAGTTAGTCAAGAGAAATTAAAAATGAATCACAACTTTATCATTGGT ] [+] EMBL CD130635 [ AAATGGAAGACATTTTCATTACATACATCTATCCATATATATGGCGTACATGTGTGTGTGTAATGTGAGAAGAATATACTACTTAAAAAGAAGGTAAAGAATTACTCATTTGGATCACAGACTATTCTGTTTATAGTCGGGTTTC TTTTCAAACAGATATATCTGAACTAAATGATGAAGATACTACTACTATTATTACTACTGGTACTAATATGAGGAAAGCACACAAAATGTACCGCACATATACATATATGCATTACCGTCAGTATACTGTTTAAAGCACAGAAAATATAGCACGGTAAGAACAAGCGGAAGGGTAGAAACAATCTCCTTNCTCTCTGTCTTTCTCCTTCAAAAAACCCCCCACAACTAGGGGAGATAAAACGAACAATACAAAAAGGGGGCAAGTTAGTCAAGAGAAATTAAAAATGAATCACAACTTTATCATTGGTACGAATTAGTTTATAAATCACAATATGTATCACTACTATTGTGTTNAGTAGTAATGA ] [+] EMBL CD149559 [ AGACATTTTCATTACATACATCTATCCATATATATGGCGTACATGTGTGTGTGTAATGTGAGAAGAATATACTACTTAAAAAGAAGGTAAAGAATTACTCATT ] [+] EMBL CD179059 [ TTACTCATTTGGATCACAGACTATTCTGTTTATAGTCGGGTTTC TTTTCAAACAGATATATCTGAACTAAATGATGAAGATACTACTACTATTATTACTACTGGTACTAATATGAGGAAAGCACACAAAATGTACCGCACATATACATATATGCATTACCGTCAGTATACTGTTTAAAGCACAGAAAATATAGCACGGTAAGAACAAGCGGAAGGGTAGAAACAATCTCCTT CTCTCTGTCTTTCTCCTTC AAAAACCCCCCACAACTAGGGGAGATAAAACGAACAATACAAAAAGGGGGCAAGT ] [+] EMBL CD186390 [ GAGGAAAGCACACAAAATGTACCGCACATATACATATATGCATTACCGTCAGTATACTGTTTAAAGCACAGAAAATATAGCACGGTAAGAACAAGCGGAAGGGTAGAAACAATCTCCTT CTCTCTGTCTTTCTCCTTCAAAAAACCCCCCACAACTAGGGGAGATAAAACGAACAATACAAAAAGGGGGCAAGTTAGTCAAGAGAAATTAAAAATGAATCACAACTTTATCATTGGTACGAATTAGTTTATAAATCACAATATGTATCACTACTATTGTGTT AGTAGTAATGAAATTGGTGAGAGAATACAAAACAGGTAAATATNTTTTGCTCTTCTATTTCTCAATCGAATTTAAAAGATTTTAAAAAAACACACATAGAAACTGATCCAAGTTGAAAGAATAGTTTTAA ] [+] EMBL CD069031 [ GCGGAAGGGTAGAAACAATCTCCTT CTCTCTGTCTTTCTCCTTC AAAAACCCCCCACAACTAGGGGAGATAAAACGAACAATACAAAAAGGGGGCAAGTTAGTCAAGAGAAATT ] [-] EMBL CD179136 [ TCTCCTT CTCTCTGTCTTTCTCCTTCAAAAAACCCCCCACAACTAGGGGAGATAAAACGAACAATACAAAAAGGGGGCAAGTTAGTCAAGAGAAATTAAAAATGAATCACAACTTTATCATTGGTACGAATTAGTTTATAAATCACAATATGTATCACTACTATTGTGTT AGTAGTAATGAAATTGGTGAGAGAATACAAAACAGGTAAATATTTTTTGCTCTTCTATTTCTCAATCGAATTTAAAAGATTTTAAAAAAACACACATAGAAACTGATCCAAGTTGAAAGAATAGTTTTAATAATTTCTTGGCGCTGCAGGAGCTACTCGATAAGGTACTTGATTACGGTAATTGTCGTTGAGGTTATTACTGTTATTCACACTACTATTAATACTACCAACACGATAAGTTTTAGG ] [-] EMBL CD080267 [ AACCCCCCACAACTAGGGGAGATANAACGAACAATACAAAAAGGGGGCAAGTTAGTCAAGAGAAATTAAAAATGAATCACAACTTTATCATTGGTACGAATTAGTTTATAAATCACAATATGTATCACTACTATTGTGTT AGTAGTAATGAAATTGGTGAGAGAATACAAAACAGGTAAATATTTTTTGCTCTTCTATTTCTCAATCGAATTTAAAAGATTTTAAAAAAACACACATAGAAACTGATCCAAGTTGAAAGAATAGTTTTAATAATTTCTTGGCGCTGCAGGAGCTACTCGATAAGGTACTTGATTACGGTAATTGTCGTTGAGGTTATTACTGTTATTCACACTACTATTAATACTACCAACACGATAAGTTTTAGGACCATAATATGATTTCGGAACAGGAACACTTCCAATATCAGGAAAAGTGAAACGACTTTCAAAACGACGAACAAGACTAGCGATATTATTATTATCATCATTATAATTATTCATTGGAGATAATGATGATGGTTGTTGAGGAGGTGGCGGTGGAGGCGGCGGCGGCGGTGTTGGATGTGCCCGTGAATTCGCCCCTC] [+] EMBL CD126705 [ gtaccgTATTA TCCCAACACGAT AGTTTTAGGACCATAATATGATTTCGGAACAGGAACACTTCCAATATCAGGAAAAGTGAAACGACTTTCAAAACGACGAACAAGACTAGCGATATTATTATTATCATCATTATAATTATTCATTGGAGATAATGATGATGGTTGTTGAGGAGGTGGCGGTGGAGGC ] [+] EMBL CD126712 [ ttatcCCAACACGAT AG TTTAGGACCATAATATGA TTCGGAACAGGAACACTTCCAATATCAGGAAAAGTGAAACGACTTTCAAAACGACGAACAAGACTAGCGATATTATTATTATCATCATTATAATTATTCATTGGAGATAATGATGATGGTTGTTGAGGAGGTGGCGGTGGAGGC ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||