cluster # 10253

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Schistosoma mansoni
cluster # 10253 cluster # 10253 Sequences # 14 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10253#0 length = 1258 sequences # 7
consensus_10253#1 length = 1117 sequences # 5

consensus_10253#2 length = 458 sequences # 1
consensus_10253#3 length = 153 sequences # 1

consensusID : consensus_10253#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1258
fasta sequence

                              [CCTGAAAAAGTAGTTGTGAAGAATGTAAGATTTTCTTTTAGTTTAATTTTATGACCTAATGTAGGTTTAAGAAATCTGTTGTAAGTAGATTCATATATCCTGGTTTTCAAAATGGTACTGAGGTTGTTGCGTGTTGAATATCATTTACCAATATTTTTTCTATGCTTAGGTTTTTTACTGTCATCATGTTTTAATTATTTCGATATCTTTTTCATCCTCTTCTGTTTAATCTCCTTTTCTCTTCCTCTGCCCCGATATGATATGTGACAGCTTGGACCAGTGCATATTTGTGCCTAGATCCTAAGTTGTTCTATGGTTCACTTATTG-ACTGACTCAACATCTGAGAGATTTTAGAATT-TTGTTGTTGAGTTC-TTTGAGTTAGATGGTCTTCATTTTCATTATGG-ACAACATCAGCATTTACTTCTTGTAGAAGTGAGCTTCGATTATTCCACATTACTTGTAAAATATCTCTATCTTTACCTAAATTATTTTAATAGGTTTATTTGCTCGTAATTTCTATCAAGAATGGTTATCAAATAACTACTATGTCGCAATAATAATAATATTTTGGCGTTACTTATTGAGAAATTTTTATGTATGCTATCTATTTTTAGCTTCCATTCTCATTTGATTCACATGATGTGAAAAGAATATTTAGAGAAGTTGGAGATTTAAACACTTGTAATCTGGTAACAGACGCTCAAGGCCACTCTCAAGGGATCGCATTTCTCACCTATGCAGATATTGATGGTATTTATCGTGCAATAGATGCTTTTGACGGTAAAATGTTTGAAGGACGACGTCTTCGAGTGCATGCTGAATAAAT-ATATTAAGTTGAACTGCGACTAATCTTACTTTTACAAAATATGTATTCGTATTATACTAACAGTTATGCACCGTCGAATATTGTCATCGTTTCCTCTAGTTTGTTACAACGCTCATTTCATCTTTACTGTATATCGATATTATTGCTATGTTTTCACTTGTGAATGAACATTGTTAGGCATATGAAATTCTTTTCATTGCTTACATGATAACAATGATAGTAGTAATAATCACAAATGAATATGGGTATATAAAATGTTCGTTTTTGTTTCCTACCATTTTCCAATTTTCTATCTTTTTATCTTTATTGTTATCGCCCGCCGCATTTCTCATTATCTGTTTGTTAGTGTTTGTCATTTTCACTTTCATGCTGTTATTACCGTTTTTCAAAAAAAAAATAACCATAATAATAAATATTAAGGAAATATACCCT]

[+] EMBL CD120484             [CCTGAAAAAGTAGTTGTGAAGAATGTAAGATTTTCTTTTAGTTTAATTTTATGACCTAATGTAGGTTTAAGAAATCTGTTGTAAGTAGATTCATATATCCTGGTTTTCAAAATGGTACTGAGGTTGTTGCGTGTTGAATATCATTTACCAATATTTTTTCTATGCTTAGGTTTTTTACTGTCATCATGTTTTAATTATTTCGATATCTTTTTCATCCTCTTCTGTTTAATCTCCTTTTCTCTTCCTCTGCCCCGATATGATATGTGACAGCTTGGACCAGTGCATATTTGTGCCTAGATCCTAAGTTGTTCTATGGTTCACTTATTGNACTGACTC ACATCTGAGAGATTTTAGAATTNNTG TGTTGAGNTCTTTTGAG TAGATGGTCTTCATTTTCATTATGGNAC ACATCAGCATTTACTTCTTGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD120142             [                                           tnanTTTATGACCTAATGTAAGTTTAAGAAATCTGTTGTAAGTAGATTCATATATCCTGGTTTTCAAAATGGTACTGAGGTTGTTGCGTGTTGAATAACATTTACCAATATTTTTTCTATGCTTAGGTTTTTTACTGTCATCATGTTTTAATTATTTCGATATCTTTTTCATCCTCTTCTGTTTAATCTCCTTTTCTCTTCCTCTGCCCCGATATGATATGTGACAGCTTGGACCAGTGCATATTTGTGCCTAGATCCTAAGTTGTTCTATGGTTCACTTATTG ACTGACTCAACATCTGAGAGATTTTAGAATT TTGTTGTTGAGTTC TTTGAGTTAGATGGTCTTCATTTTCATTATGG ACAACATCAGCATTTACTTCTTGTAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD082314             [                                                                                                                                                                                                            agagacTTCATCCTCTTCTGTTTAATCTCCTTTTCTTTTCCTCTGCCCCGATATCATATGTGACAGCTTGGACCAGTGCATATTTGTGCCTAGATCCTAAGTTGTTCTATGGTTCACTTATTG ACTGACTCAACATCTGAGAGATTTTAGAATT TTGTTGTTGAGTTC TTTGAGTTAGATGGTCTTCATTTTCATTATGG ACAACATCAGCATTTACTTCTTGTAGAAGTGAGCTTCGATTATTCCACATTACTTGTAAAATATCTCTATCTTTACCTAAATTATTTTAATAGGTTTATTTGCTCGTAATTTCTATCAAGAATGGTTATCAAATAACTACTATGTCGCAATAATAATAATATTTTGGCGTTACTTATTGAGAAATTTTTATGTATGCTATCTATTTTTAGCTTCCATTCTCATTTGATTCACATGATGTGAAAAGAATATTTAGAGAAGTTGGAGATTTAAACACTTGTAATCTGGTAACAGACGCTCAAGGCCACTCTCAAGGGATCGCATTTCTCACCTATGCAGATATTGATGGTATTTATCGTGCAATAGATGCTTTTGACGGTAAAATGTTTGAAGGACGACGTCTTCGAGTGCATGCTGAATAAAT ATATTAAGNTGAACTGCGACTAAT                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD149121             [                                                                                                                                                                                                                                                                                                                                                                                                                                                  AAGTGAGCTTCGACTATTCCACATTACTTGTAAAATATCTCTATCTTTACCTAAATTATTTTAATAGGTTTATTTGCTCGTAATTTCTATCAAGAATGGTTATCAAATAACTACTATGTCGCAATAATAATAATATTTTGGCGTTACTTATTGAGAAATTTTTATGTATGCTATCTATTTTTAGCTTCCATTCTCATTTGATTCACATGATGTGAAAAGAATATTTAGAGAAGTTGGAGATTTAAACACTTGTAATCTGGTAACAGACGCTCAAGGCCACTCTCAAGGGATCGCATTTCTCACCTATGCAGATATTGATGGTATTTATCGTGCAATAGATGCTCTTGACGGTAAAATGTTTGAAGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD075916             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TATGTATGCTATCTATTTTTAGCTTCCATTCTCATTTGATTCACATGATGTGAAAAGAATATTTAGAGAAGTTGGAGATTTAAACACTTGTAATCTGGTAACAGACGCTCAAGGCCACTCTCAAGGGATCGCATTTCTCACCTATGCAGATATTGATGGTATTTATCGTGCAATAGATGCTTTTGACGGTAAAATGTTTGAAGGACGACGTCTTCGAGTGCATGCTGAATAATA ATATTAAGTTGAACTGCGACTAATCTTACTTTTACAAAATATGTATTCGTATTATACTAACAGTTATGCACCGTCGAATATTGTCATCGTTTCCTCTAGTTTGTTACAACGCTCATTTCATCTTTACTGTATATCGATATTATTGCTATGTTTTCACTTGTGAATGAACATTGTTAGGCATATGAAATTCTTTTCATTGCTTACATGATAACAATGATAGTAGTAATAATCACAAATGAATATGGGTATATAAAATGTTCGTTTTTGTTTCCTACCATTTTCCAATTTTCTATCTTTTTATCTTTATTGTTATCGCCCGCCGCATTTCTCATTATCTGTTTGTTAGTGTTTGTCATTTTCACTTTCATGCTGTTATTA                                                      ]
[-] EMBL CD076681             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AATAATATTAAGTTGAACTGCGACTAATTTTACTTTTACAAAATATGTATTTGTATTATACTAACAGTTATGCCCCGTCGAAAATTGTCATCGTTTCCTCTAGTTTGTTACAACGCTCATTTCATCTTTACTGTAAATCGATATTATTGCTATGTTTTCACTTGTGAATGAACATTGTTAGGCATATGAAATTTTTTTCATTGCTTACATGATACCAATGATAGTAGTAATAATCCCAAATGAATATGGGTATATAAAATGTTCGTTTTTGTTTCCTACCATTTTCCAATTTTCTATCTTTTTATCTTTATTGTTATCGCCCCCCGCATTTTTCATTATCTGTTTGTTAGTGTTTGTCATTTTCACTTTCATGCTGTTATTACCGTTTTTCAAAAAAAAAATAACCATAATAATAAATATTAAGGAAATATACCCT]
[-] EMBL CD076878             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TTTCCTCTAGTTTGTGACAACGCTCATTTCATCTTTACTGTATATCGATATTATTGCTATGTTTTCACTTGTGAATGAACATTGTTAGGCATATGAAATTCTTTTCATTGCTTACATGATAACAATGATAGTAGTAATAGTCGCAAATGAATATGGGTATATAAAATGTTTGTTTTTGTTTCCAACCATTTTCCAATTTTCTATCTTTTTATCTTTATTGTTATCGCCCGCCGCATTTCTCATTATCTGTTTGGCAGTGTTAGTCATATTCACTTTCAAGCTGTCATCACCGTTCTTCAAAAAAAAAATATCCATAATAATGAATTTTA              ]




>consensus_10253#0
CCTGAAAAAGTAGTTGTGAAGAATGTAAGATTTTCTTTTAGTTTAATTTTATGACCTAAT
GTAGGTTTAAGAAATCTGTTGTAAGTAGATTCATATATCCTGGTTTTCAAAATGGTACTG
AGGTTGTTGCGTGTTGAATATCATTTACCAATATTTTTTCTATGCTTAGGTTTTTTACTG
TCATCATGTTTTAATTATTTCGATATCTTTTTCATCCTCTTCTGTTTAATCTCCTTTTCT
CTTCCTCTGCCCCGATATGATATGTGACAGCTTGGACCAGTGCATATTTGTGCCTAGATC
CTAAGTTGTTCTATGGTTCACTTATTGACTGACTCAACATCTGAGAGATTTTAGAATTTT
GTTGTTGAGTTCTTTGAGTTAGATGGTCTTCATTTTCATTATGGACAACATCAGCATTTA
CTTCTTGTAGAAGTGAGCTTCGATTATTCCACATTACTTGTAAAATATCTCTATCTTTAC
CTAAATTATTTTAATAGGTTTATTTGCTCGTAATTTCTATCAAGAATGGTTATCAAATAA
CTACTATGTCGCAATAATAATAATATTTTGGCGTTACTTATTGAGAAATTTTTATGTATG
CTATCTATTTTTAGCTTCCATTCTCATTTGATTCACATGATGTGAAAAGAATATTTAGAG
AAGTTGGAGATTTAAACACTTGTAATCTGGTAACAGACGCTCAAGGCCACTCTCAAGGGA
TCGCATTTCTCACCTATGCAGATATTGATGGTATTTATCGTGCAATAGATGCTTTTGACG
GTAAAATGTTTGAAGGACGACGTCTTCGAGTGCATGCTGAATAAATATATTAAGTTGAAC
TGCGACTAATCTTACTTTTACAAAATATGTATTCGTATTATACTAACAGTTATGCACCGT
CGAATATTGTCATCGTTTCCTCTAGTTTGTTACAACGCTCATTTCATCTTTACTGTATAT
CGATATTATTGCTATGTTTTCACTTGTGAATGAACATTGTTAGGCATATGAAATTCTTTT
CATTGCTTACATGATAACAATGATAGTAGTAATAATCACAAATGAATATGGGTATATAAA
ATGTTCGTTTTTGTTTCCTACCATTTTCCAATTTTCTATCTTTTTATCTTTATTGTTATC
GCCCGCCGCATTTCTCATTATCTGTTTGTTAGTGTTTGTCATTTTCACTTTCATGCTGTT
ATTACCGTTTTTCAAAAAAAAAATAACCATAATAATAAATATTAAGGAAATATACCCT

consensusID : consensus_10253#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1117
fasta sequence

                              [CTCAGGAATCAATCGATCCTACTCAGGTCAACTCCCTCAAGATGGATTACAACAATTAATTTCAGCAGCTGTTGCTGGTGGAATGTCTCAGACACAAATAACCTCTGTATTGTCGACACTAGGTTTATTTCAGAACTCTCATTCGGATCATCAGTCTGGTCAGTTAAATGCTTCAAATATTATTGGTCGAGATGGTGGTGGTGGGTGTGGTGACCGAAGCGTTGATAGATCACATTTTGACAATGGATATGTTGGTCGTTCAAAGTATGAAATTTCAGGTAATTATCGAGTAGATTCTCGGAGTAGCAGACAAGATTCATATAATATGGGTGGTTCTTTAATGAAACCATCAGGGTCGCCTAATCTTTCAGGCCGTGGAAGTTACTCTAGATCATCTGATCGAGGACGTGATGAAAATGGTCCACAACATAACAATGATCGACGTCAGATACCTGAAAAAGTAGTTGTGAAGAATCTTCCATTCTCATTTGA-TTCACATGATGTGAAAAGAATATTTAGAGAAGTTGGAGATTTAAACACTTGTAATCTGGTAACAGACGCTCAAGGCCACTCTCAAGGGATCGCATTTCTCACCTATGCAGATATTGATGGTATTTATCGTGCAATAGATGCTTTTGACGGTAAAATGTTTGAAGGACGACGTCTTCGAGTGCATGCTGAATAATAATATTAAGTTGGACTGCGACTAATCTTACTTTTACAAAATATGTATTCGTATTATACTAACAGTTATGCACCGTCGAATATTGTCATCGTTTCCTCTAGTTTG-TTACAACGCTCATTTCATCTTTACTGTATATCGATATTATTGCTATGTTTTCACTTGTGAATGAACATTGTTAGGCATATGAAATTCTTTTCATTGCTTACATGATAAACATGATAGTAGTAATAATCACAAATGAATATGGGTATATAAAATGTTCGTTTTTGTTTCCTACCATTNTCCAATTNTCTATCTTTTTATCTTTATTGGTATCGCCCGNCGCATTTCTCATTATCTGGTTTGTAGGGTTTGGCATTTTCACTTTCATGCTNGTATTACCCGTCTTCAAAAAAAAATTACCATTATATTAATATTTAGGAAATATAACCT]

[-] EMBL BG931331             [CTCAGGAATCAATCGATCCTACTCAGGTCAACTCCCTCAAGATGGATTACAACAATTAATTTCAGCAGCTGTTGCTGGTGGAATGTCTCAGACACAAATAACCTCTGTATTGTCGACACTAGGTTTATTTCAGAACTCTCATTCGGATCATCAGTCTGGTCAGTTAAATGCTTCAAATATTATTGGTCGAGATGGTGGTGGTGGGTGTGGTGACCGAAGCGTTGATAGATCACATTTTGACAATGGATATGTTGGTCGTTCAAAGTATGAAATTTCAGGTAATTATCGAGTAGATTCTCGGAGTAGCAGACAAGATTCATATAATATGGGTGGTTCTTTAATGAAACCATCAGGGTCGCCTAATCTTTCAGGCCGTGGAAGTTACTCTAGATCATCTGATCGAGGACGTGATGAAAATGGTCCACAACATAACAATGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD137376             [                                                                                                                                                                                                                                                                                    AGGTAATTATCGAGTAGATTCTCGGAGTAGCAGACAAGATTCATATAATATGGGTGGTTCTTTAATGAAACCATCAGGGTCGCCTAATCTTTCAGGCCGTGGAAGTTACTCTAGATCATCTGATCGAGGACGTGATGAAAATGGTCCACAACATAACAATGATCGACGTCAGATACCTGAAAAAGTAGTTGTGAAGAATCTTCCATTCTCATTTGA TTCACATGATGTGAAAAGAATATTTAGAGAAGTTGGAGATTTAAACACTTGTAATCTGGTAACAGACGCTCAAGGCCACTCTCAAGGGATCGCATTTCTCACCTATGCAGATATTGATGGTATTTATCGTGCAACAGATGCTTTTGACGGTAAAATGTTTGAAGGACGACGTCTTCGAGTGCATGCTGAATAATAATATTAAGTTGGACTGCGACTAATCTTACTTTTACAAAATATGTATTCGTATTATACTAACAGTTATGCACCGTCGAATATTGTCATCGTTTCCTTTAGTTTG TTACAACGCTCATTTCATCTTTACTGTATATCGATATTATTGCTATGTTTTCACTTGTGAATGAACATTGTTAGGCATATGAAATTCTTTTCATTGCTTACATGATAAACATGATAGTAGTA                                                                                                                                                                                                             ]
[+] EMBL CD083107             [                                                                                                                                                                                                                                                                                                                                                                                    CCGTGGAAGTTACTCTAGATCATCTGATCGAGGACGTGATGAAAATGGTCCACAACATAACAATGATCGACGTCAGATACCTGAAAAAGTAGTTGTGAAGAATCTTCCATTCTCATTTGA TTCACATGATGTGAAAAGAATATTTAGAGAAGTTGGAGATTTAAACACTTGTAATCTGGTAACAGACGCTCAAGGCCACTCTCAAGGGATCGCATTTCTCACCTATGCAGATATTGATGGTATTTATCGTGCAATAGATGCTTTTGACGGTAAAATGTTTGAAGGACGACGTCTTCGAGTGCATGCTGAATAATAATATTAAGTTGAACTGCGACTAATCTTACTTTTACAAAATATGTATTCGTATTATACTAACAGTTATGCACCGTCGAATATTGTCATCGTTTCCTCTAGTTTG TTACAACGCTCATTTCATCTTTACTGTATATCGATATTATTGCTATGTTTTCACTTGTGAATGAACATTGTTAGGCATATGAAATTCTTTTCATTGCTTACATGATAACAATGATAGTAGTAATAATCACAAATGAATATGGGTATATAAAATGTTCGTTTTTGTTTCCTACCATTNTCCAATTNTCTATCTTTTTATCTTTATTGGTATCGCCCGNCGCATTTCTCATTATCTGGTTTGTAGGGTTTGGCATTTTCACTTTCATGCTNGTATTACCCGTCTTCAAAAAAAAATTACCATTATATTAATATTTAGGAAATATAACCT]
[+] EMBL CD158038             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CCTGAAAAAGTAGTTGTGAAGAATCTTCCATTCTCATTTGAGTCCACATGATGTGAAAAGAATATTTAGAGAAGTTGGAGATTTAAACACTTGTAATCTGATAACAGACGCTCAAGGCCACTCTCAAGGGATCGCATTTCTCACCTATGCAGATATTGATGGTATTTATCGTGCAATAGATGCTTTTGACGGTAAAATGTTTGAAGGACGACGTCTTCGAGTGCATGCTGAATAATAATATTAAGTTGAACTGCGACTAATCTTACTTTTACAAAATATGTATTCGTATTATACTAACAGTTATGCACCGTCGAATATTGTCATCGTTTCCTCTAGTTNGNNTAC ACGCTCATTTCATCT                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD193519             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CCTGAAAAAGTAGTTGTGAAGAATCTTCCATTCTCATTTGA TTCACATGATGTGAAAAGAATATTTAGAGAAGTTGGAGATTTAAACACTTGTAATCTGGTAACAGACGCTCAAGGCCACTCTCAAGGGATCGCATTTCTCACCTATGCAGATATTGATGGTATTTATCGTGCAATAGATGCTTTTGACGGTAAAATGTTTGATGGACGACGTCTTCGAGTGCATGCTGAATAATAATATTAAGTTGGACTGCGACTAATCTTACTTTTACAAAATATGTATTCGTATTATACTAACAGTTATGCACCGTCGAATATTGTCATCGTTTCCTCTAGTTTG TTACAACGCTCATTTCATCT                                                                                                                                                                                                                                                                                                                   ]




>consensus_10253#1
CTCAGGAATCAATCGATCCTACTCAGGTCAACTCCCTCAAGATGGATTACAACAATTAAT
TTCAGCAGCTGTTGCTGGTGGAATGTCTCAGACACAAATAACCTCTGTATTGTCGACACT
AGGTTTATTTCAGAACTCTCATTCGGATCATCAGTCTGGTCAGTTAAATGCTTCAAATAT
TATTGGTCGAGATGGTGGTGGTGGGTGTGGTGACCGAAGCGTTGATAGATCACATTTTGA
CAATGGATATGTTGGTCGTTCAAAGTATGAAATTTCAGGTAATTATCGAGTAGATTCTCG
GAGTAGCAGACAAGATTCATATAATATGGGTGGTTCTTTAATGAAACCATCAGGGTCGCC
TAATCTTTCAGGCCGTGGAAGTTACTCTAGATCATCTGATCGAGGACGTGATGAAAATGG
TCCACAACATAACAATGATCGACGTCAGATACCTGAAAAAGTAGTTGTGAAGAATCTTCC
ATTCTCATTTGATTCACATGATGTGAAAAGAATATTTAGAGAAGTTGGAGATTTAAACAC
TTGTAATCTGGTAACAGACGCTCAAGGCCACTCTCAAGGGATCGCATTTCTCACCTATGC
AGATATTGATGGTATTTATCGTGCAATAGATGCTTTTGACGGTAAAATGTTTGAAGGACG
ACGTCTTCGAGTGCATGCTGAATAATAATATTAAGTTGGACTGCGACTAATCTTACTTTT
ACAAAATATGTATTCGTATTATACTAACAGTTATGCACCGTCGAATATTGTCATCGTTTC
CTCTAGTTTGTTACAACGCTCATTTCATCTTTACTGTATATCGATATTATTGCTATGTTT
TCACTTGTGAATGAACATTGTTAGGCATATGAAATTCTTTTCATTGCTTACATGATAAAC
ATGATAGTAGTAATAATCACAAATGAATATGGGTATATAAAATGTTCGTTTTTGTTTCCT
ACCATTNTCCAATTNTCTATCTTTTTATCTTTATTGGTATCGCCCGNCGCATTTCTCATT
ATCTGGTTTGTAGGGTTTGGCATTTTCACTTTCATGCTNGTATTACCCGTCTTCAAAAAA
AAATTACCATTATATTAATATTTAGGAAATATAACCT

consensusID : consensus_10253#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 458
fasta sequence

                              [ACAATATTCGACGGTGCATAACTGTTAGTATAATACGAATACATATTTTGTAAAAGTAAGATTAGTCGCAGTCCAACCTATTATAAAGAAAAGAAGACAACAGACAATATGTTTCATTGAAATATCCATAAAAAATATTTTGGTTAGTATGATTAATAAGATAGAAATGGTCACTTGAAGGTAAAGCACGGGAAGGCGGCAAGTAGTGTTTCGGGAATTGATGCTGTCTGTAGGATTCGAACCCTAATCTCCCTGCTTCAAAGTCTGATCAAGACGAGCAGCAACAGACCTCTCTTATAAAGAAGTGGAATATTTATAATTGATTGGTCACTGCCTAGTCGTTAATGTCTTGTTAGTTCAGGTTACCCTGTCGACTACATCTCACCATATAACGTCTCGACATAGTACACACAGTATCAAGTCACATAGACTAGTGGTCACATTAGAACTTGATCCAT]

[+] EMBL CD140526             [ACAATATTCGACGGTGCATAACTGTTAGTATAATACGAATACATATTTTGTAAAAGTAAGATTAGTCGCAGTCCAACCTATTATAAAGAAAAGAAGACAACAGACAATATGTTTCATTGAAATATCCATAAAAAATATTTTGGTTAGTATGATTAATAAGATAGAAATGGTCACTTGAAGGTAAAGCACGGGAAGGCGGCAAGTAGTGTTTCGGGAATTGATGCTGTCTGTAGGATTCGAACCCTAATCTCCCTGCTTCAAAGTCTGATCAAGACGAGCAGCAACAGACCTCTCTTATAAAGAAGTGGAATATTTATAATTGATTGGTCACTGCCTAGTCGTTAATGTCTTGTTAGTTCAGGTTACCCTGTCGACTACATCTCACCATATAACGTCTCGACATAGTACACACAGTATCAAGTCACATAGACTAGTGGTCACATTAGAACTTGATCCAT]




>consensus_10253#2
ACAATATTCGACGGTGCATAACTGTTAGTATAATACGAATACATATTTTGTAAAAGTAAG
ATTAGTCGCAGTCCAACCTATTATAAAGAAAAGAAGACAACAGACAATATGTTTCATTGA
AATATCCATAAAAAATATTTTGGTTAGTATGATTAATAAGATAGAAATGGTCACTTGAAG
GTAAAGCACGGGAAGGCGGCAAGTAGTGTTTCGGGAATTGATGCTGTCTGTAGGATTCGA
ACCCTAATCTCCCTGCTTCAAAGTCTGATCAAGACGAGCAGCAACAGACCTCTCTTATAA
AGAAGTGGAATATTTATAATTGATTGGTCACTGCCTAGTCGTTAATGTCTTGTTAGTTCA
GGTTACCCTGTCGACTACATCTCACCATATAACGTCTCGACATAGTACACACAGTATCAA
GTCACATAGACTAGTGGTCACATTAGAACTTGATCCAT

consensusID : consensus_10253#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 153
fasta sequence

                              [TTGGTCGAGATGGTGGTGGTGGGTGTGGTGACCGAAGCGTTGATAGATCACATTTTGACAATGGATATGTTGGTCGTTCAAAGTATGAAATTTCATGTGAGCCAGACTGTGATCTTGTGTTGTTGTGTACTACATAAACTCGATTTCGTTGAT]

[+] EMBL CD163995             [TTGGTCGAGATGGTGGTGGTGGGTGTGGTGACCGAAGCGTTGATAGATCACATTTTGACAATGGATATGTTGGTCGTTCAAAGTATGAAATTTCATGTGAGCCAGACTGTGATCTTGTGTTGTTGTGTACTACATAAACTCGATTTCGTTGAT]




>consensus_10253#3
TTGGTCGAGATGGTGGTGGTGGGTGTGGTGACCGAAGCGTTGATAGATCACATTTTGACA
ATGGATATGTTGGTCGTTCAAAGTATGAAATTTCATGTGAGCCAGACTGTGATCTTGTGT
TGTTGTGTACTACATAAACTCGATTTCGTTGAT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10253#1      ------------------------------------------------------------
consensus_10253#3      ------------------------------------------------------------
consensus_10253#0      CCTGAAAAAGTAGTTGTGAAGAATGTAAGATTTTCTTTTAGTTTAATTTTATGACCTAAT 60
consensus_10253#2      ------------------------------------------------------------
                                                                                   

consensus_10253#1      ------------------------------------------------------------
consensus_10253#3      ------------------------------------------------------------
consensus_10253#0      GTAGGTTTAAGAAATCTGTTGTAAGTAGATTCATATATCCTGGTTTTCAAAATGGTACTG 120
consensus_10253#2      ------------------------------------------------------------
                                                                                   

consensus_10253#1      -------------------CTCAGGAATCAATCGATCCTACTCAGGTCAACTCCCTCAAG 41
consensus_10253#3      ------------------------------------------------------------
consensus_10253#0      AGGTTGTTGCGTGTTGAATATCATTTACCAATATTTTTTCTATGCTTAGGTTTTTTACTG 180
consensus_10253#2      ------------------------------------------------------------
                                                                                   

consensus_10253#1      ATGGATTACAACAATTAATTTCAGCAGCTGTTGCTGGTGGAATGTCTCAGACACAAATAA 101
consensus_10253#3      ------------------------------------------------------------
consensus_10253#0      TCATCATGTTTTAATTATTTCGATATCTTTTTCATCCTCTTCTGTTTAATCTCCTTTTCT 240
consensus_10253#2      ------------------------------------------------------------
                                                                                   

consensus_10253#1      CCTCTGTATTGTCGACACTAGGTTTATTTCAGAACTCTCATTCGGATCATCAGTCTGGTC 161
consensus_10253#3      ------------------------------------------------------------
consensus_10253#0      CTTCCTCTGCCCCGATATGATATGTGACAGCTTGGACCAGTGCATATTTGTGCCTAGATC 300
consensus_10253#2      ------------------------------------------------------------
                                                                                   

consensus_10253#1      ---AGTTAAATGCTTCAAATATTATTGGTCGAGATGGTGG-TGGTGGGTGTGGTGACCGA 217
consensus_10253#3      ------------------------TTGGTCGAGATGGTGG-TGGTGGGTGTGGTGACCGA 35
consensus_10253#0      CTAAGTTGTTCTATGGTTCACTTATTGACTGACTCAACATCTGAGAGATTTTAGAATTTT 360
consensus_10253#2      ------------------------------------------------------------
                                                                                   

consensus_10253#1      AGCGTTGATAGATCACATTTTGACAATGGATATGTTGGTCGTTCAAAGTATGAAATTTCA 277
consensus_10253#3      AGCGTTGATAGATCACATTTTGACAATGGATATGTTGGTCGTTCAAAGTATGAAATTTCA 95
consensus_10253#0      GTTGTTGAGTTCTTTGAGTTAGATGGTCTTCATTTTCATTATGGACAACATCAGCATTTA 420
consensus_10253#2      ------------------------------------------------------------
                                                                                   

consensus_10253#1      GGT-AATTATCGAGTAGATTCTCGGAGTAGCAGACAAGATTCATATAATATGGGTGGTTC 336
consensus_10253#3      TGTGAGCCAGACTGTGATCTTGTGTTGTTGTGTACTACATAAACTCGATTTCGTTGAT-- 153
consensus_10253#0      CTTCTTGTAGA-AGTGAGCTTCGATTATTCCACATTACTTGTAAAATATCTCTATCTTTA 479
consensus_10253#2      ------------------------------------------------------------
                                                                                   

consensus_10253#1      TTTAATGAAACCATCAGGGTCGCCTAATCTTTCAGGCCGTGGAAGTTACTCTAGATCATC 396
consensus_10253#3      ------------------------------------------------------------
consensus_10253#0      CCTAAATTATTTTAATAGGTTTATTTGCTCGTAATTTCTATCAAGAATGGTTATCAAATA 539
consensus_10253#2      ------------------------------------------------------------
                                                                                   

consensus_10253#1      TGATCGAGGACGTGATGAAAATGGTCCACAACATAACAATGATCGACGTCAGATACCTGA 456
consensus_10253#3      ------------------------------------------------------------
consensus_10253#0      ACTACTATGTCGCAATAATAATAAT----ATTTTGGCGTTACTTATTGAGAAATTTTTAT 595
consensus_10253#2      ----------------------------------------------------------AC 2
                                                                                   

consensus_10253#1      AAAAGTAGTTGTGAAGAATCTTCCATTCTCATTTGATT-CACATGATGTGAAAAGAATAT 515
consensus_10253#3      ------------------------------------------------------------
consensus_10253#0      GTATGCTATCTATTTTTAGCTTCCATTCTCATTTGATT-CACATGATGTGAAAAGAATAT 654
consensus_10253#2      AATATTCGACGGTGCATAACTGTTAGTATAATACGAATACATATTTTGTAAAAGTAAGAT 62
                                                                                   

consensus_10253#1      TTAGAGAAGTTGGAGATTTAAACACTTGTAATCTGGTAACAGACGCTCAAGGCCACTCTC 575
consensus_10253#3      ------------------------------------------------------------
consensus_10253#0      TTAGAGAAGTTGGAGATTTAAACACTTGTAATCTGGTAACAGACGCTCAAGGCCACTCTC 714
consensus_10253#2      TAGTCGCAGTCCAACCTATTA-TAAAGAAAAGAAGACAACAGACAAT--ATGTTTCATTG 119
                                                                                   

consensus_10253#1      AAGGGATCGCATTTCTCACCTATGCAGATATTGATGGTATTTATCGTGCAATAGATGCTT 635
consensus_10253#3      ------------------------------------------------------------
consensus_10253#0      AAGGGATCGCATTTCTCACCTATGCAGATATTGATGGTATTTATCGTGCAATAGATGCTT 774
consensus_10253#2      AAATATCCATAAAAAATATTTTGGTTAGTATGATTAATA---AGATAGAAATGGTCACTT 176
                                                                                   

consensus_10253#1      TTGACGGTAAAATGTTTGAAGGACGACGTCTTCGAGTGCATGCTGAATAATAATATTAAG 695
consensus_10253#3      ------------------------------------------------------------
consensus_10253#0      TTGACGGTAAAATGTTTGAAGGACGACGTCTTCGAGTGCATGCTGAATAAATATATTAAG 834
consensus_10253#2      --GAAGGTAAAGCACGGGAAGG-CGGCAAGT---AGTGTTTCGGGAATTGATGCTGTCTG 230
                                                                                   

consensus_10253#1      TTGGACTGCGAC--TAATCTTACTTTTACAAAATATGTATTCGTATTATACTAACAGTTA 753
consensus_10253#3      ------------------------------------------------------------
consensus_10253#0      TTGAACTGCGAC--TAATCTTACTTTTACAAAATATGTATTCGTATTATACTAACAGTTA 892
consensus_10253#2      TAGGATTCGAACCCTAATCTCCCTGCTTCAAAGTCTGATCAAGACGAGCAGCAACAGACC 290
                                                                                   

consensus_10253#1      TGCACCGTCGAATATTGTCATCGTTTCCTCTAGTTTGTTACAACGCTCATTTCATCTTTA 813
consensus_10253#3      ------------------------------------------------------------
consensus_10253#0      TGCACCGTCGAATATTGTCATCGTTTCCTCTAGTTTGTTACAACGCTCATTTCATCTTTA 952
consensus_10253#2      TCTCTTATAAAGAAGTGGAATATTTATAATTGATTGGTCACTGC------CTAGTCGTTA 344
                                                                                   

consensus_10253#1      CTGTATATCGATATTATTGCTATGTTTTCACTTGTGAATGAACATTGTTAGGCATATGAA 873
consensus_10253#3      ------------------------------------------------------------
consensus_10253#0      CTGTATATCGATATTATTGCTATGTTTTCACTTGTGAATGAACATTGTTAGGCATATGAA 1012
consensus_10253#2      ATGTCT-----TGTTA--GTTCAGGTTACCCTGTCGACTACATCTCAC----CATAT-AA 392
                                                                                   

consensus_10253#1      ATTCTTTTCATTGCTTACATGATAAACATGATAGTAG--TAATAATCACAAATGAATATG 931
consensus_10253#3      ------------------------------------------------------------
consensus_10253#0      ATTCTTTTCATTGCTTACATGATAACAATGATAGTAG--TAATAATCACAAATGAATATG 1070
consensus_10253#2      CGTCTCGACATAGTACACACAGTATCAAGTCACATAGACTAGTGGTCACATTAGAACTTG 452
                                                                                   

consensus_10253#1      GGTATATAAAATGTTCGTTTTTGTTTCCTACCATTNTCCAATTNTCTATCTTTTTATCTT 991
consensus_10253#3      ------------------------------------------------------------
consensus_10253#0      GGTATATAAAATGTTCGTTTTTGTTTCCTACCATTTTCCAATTTTCTATCTTTTTATCTT 1130
consensus_10253#2      A-TCCAT----------------------------------------------------- 458
                                                                                   

consensus_10253#1      TATTGGTATCGCCCGNCGCATTTCTCATTATCTGGTTTGTAGGGTTTGGCATTTTCACTT 1051
consensus_10253#3      ------------------------------------------------------------
consensus_10253#0      TATTGTTATCGCCCGCCGCATTTCTCATTATCTGTTTGTTAGTGTTTGTCATTTTCACTT 1190
consensus_10253#2      ------------------------------------------------------------
                                                                                   

consensus_10253#1      TCATGCTNGTATTACCCGTCTTCAAAAAAAAATTACCATTAT--ATTAATATTTAGGAAA 1109
consensus_10253#3      ------------------------------------------------------------
consensus_10253#0      TCATGCTGTTATTACCGTTTTTCAAAAAAAAAATAACCATAATAATAAATATTAAGGAAA 1250
consensus_10253#2      ------------------------------------------------------------
                                                                                   

consensus_10253#1      TATAACCT 1117
consensus_10253#3      --------
consensus_10253#0      TATACCCT 1258
consensus_10253#2      --------