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Schistosoma mansoni
cluster # 10257 cluster # 10257       Sequences # 14       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10257#0 length = 1608 sequences # 11  
consensus_10257#1 length = 891 sequences # 3  

consensusID : consensus_10257#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1608
fasta sequence
                              [CTCGAACGCCAGAATTCGGCACGAGGCGACCATTTTCAGAGGAAGAGAAGGCTGATTTTCAATTGCAAGAAGCTGAACGTTTTTCTCATCCATGGTCTCCATTTGTTTATCATATACAAAATTACTGCGCTGTAGTTGGACCGTTACGCTCAGCTCCAAGTCCTTTAAGTCATGACTTAGCGTTGTATAATTCTGGTCGTAATTGGTCTAGTCACTCAAAGGCTAGAGACCATCCTTTACTGCGGCTTGACCGTCCTATGTTTGTAAGTTTAGCTGAAATTGTTCGAGACGCTGTGGCTTGTTTGCCCAATGGAGAAGGTACTCGTGCAGATATCACCACCCTTGTACAGAATAGCGGTTTTTTACTGCCAAATGTCAATCCACGCCAGTTACAACAGTGTGTTAGTTCTGCGTTGGATCGATTACAAGGCGAAACTTCTGATCCGTCGGTCTACTTTAATAACAATCGTCGTATGTGGATTTATCGTCATAGACGTAGGACTTTTGAAAAGTTTGCTGAACTACATGAAGCAAGATGCGCTGTTAATGAAACCAAGAAAATTATTCAACGTGGTGGCAGCACATCTGTTCTGAATATTAAC-AAAACAGTTAAACCTACTAACCAATTAATTCCTGACAAGTATTCAGAATATTCTAGCAAACAAAGTAATTTACGACATAATTCTTCAAAATTTTCTGGACGTTATCATAATCATCATCACAGTGGGAGACATATTCAATCAGGTTATATCAGTCGAGATTATGGGTATATGGAATTAAACAGAAACTATTCATTTATTGATGATGATCATATACCTGATATTGAAGAATTAGAAGCAGCTGATGAAGTCANATATGATGGAATATAATTGTACATCTGCTAATTATTCAATGGATTCTAATAATGTCAAAGGTCATATTGGTGCAGTGGTTGATAACACTGATTATGATGATGGTAATGAAATGGATGAAGTGGAATATGAAAATGAAATTCTAGGTGCTTGGGATG-ATGATAATTCTACTGACCGAATAATCAATCATCCTACTGGTCAACAACAACGAGGGAACCAACAATTCAACAAAATACCTAGATATTTGGATCCATTTCAGTCAAGAAGTCCAACATCATTTATATTGCCATCAAATAATTATTCTCAGTCAACCATTAGTAATTATAAACAATCACGATTAAATGATTCTAATTATTCATCGAACTCGAAACGAATTCATAAAAACTACACAACTGCTGCTGCAGATGATGATGACGATGACGTTGAAATTGGAAACTATATTATTGACAGTGAAGAGATGAACGAGGAATATTTCTAAGCCTGATGAATCATTATCTAATTAATGATGTGTAAATATCTCATATCTTTTAAAACTCGGATTTAGATAAAGTGATTTGTTTCTTTGTTTTGATTGCCTATAGATTTCTTCCATCTTTTTAATTTCTTTGCGATTTCANAAAGAGAAAACAACCCTGTTATTCTTTAATTTCTATTCCATTAGTAAAATTCATTTATGTTTAATTTAACAGTAATTAAAGTGTAAATCAAAATTTCATGTGTACAACTATTTGACCTACCTGCAAATAAATCAGTAGTG]

[+] EMBL CD077800             [CTCGAACGCCAGAATTCGGCACGAGGCGACCATTTTCAGAGGAAGAGAAGGCTGATTTTCAATTGCAAGAAGCTGAACGTTTTTCTCATCCATGGTCTCCATTTGTTTATCATATACAAAATTACTGCGCTGTAGTTGGACCGTTACGCTCAGCTCCAAGTCCTTTAAGTCATGACTTAGCGTTGTATAATTCTGGTCGTAATTGGTCTAGTCACTCAAAGGCTAGAGACCATCCTTTACTGCGGCTTGACCGTCCTATGTTTGTAAGTTTAGCTGNAATTGTTCGAGACGCTGTGGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD082289             [                                                                              GTTTTTCNCTTTCGTGGTCATAACCCGTTTATCATATACAAAATTACTGCGCTGTAGTTGGACCGTTACGCTCAGCTCCAAGTCCTTTAAGTCATGACTTAGCGTTGTATAATTCTGGTCGTAATTGGTCTAGTCACTCAAAGGCTAGAGACCATCCTTTACTGTTGCTTGACCGTCCTATGTTTGTAAGTTTAGCTGAAATTGTTCGAGACGCTGTGGCTTGTTTGCCCAATGGAGAAGGTACTCGTGCAGATATCACCACCCTTGTACAGAATAGCGGTTTTTTACTGCCAAATGTCAATCCACGCCAGTTACAACAGTGTGTTAGTTCTGCGTTGGATCGATTACAAGGCGAAACTTCTGATCCGTCGGTCTACTTTAATAACAATCGTCGTATGTGGATTTATCGTCATAGACATAGGACTTTTGAAAAGTTTGCTGAACTACATGAAGCAAGATGCGCTGTTAATGAAACCAAGAAAATTATTCAACGTGGTGGCAGCACATCTGTTCTGAATATTAAC AAAACAGTTAAACCTACTAACCAATTAATTCCTGACAAGTATTCAGAATATTCTAGCAAACAAAGTAATTTACGACATAATTCTTCAAAA TTTCTGGACGTTATCATAATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD181695             [                                                                                                                                                                        ggCATGACTTAGCGCTGGATAATTCTGGCCGTAATTGGTCTAGTCACTCAAAGGCTAGAGACCATCCTTTACTGCGGCTTGACCGTCCTATGTTTGTAAGTTTAGCTGATATTGTTCGAGACGCTGTGGCTTGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD093308             [                                                                                                                                                                                                                                                                                                                                                                                                                                             GCGAAACTTCTGATCCGTCGGTCTACTTTAATAACAATCGTCGTATGTGGATTTATCGTCATAGACGTAGGACTTTTGAAAAGTTTGCTGAACTACATGAAGCAAGATGCGCTATTAATGAAACCAAGAAAATTATTCAACGTGGTGGCAGCACATCTGTTCTGAATATTAAC AAAACAGTTAAACCTACTAACCAATTAATTCCTGACAAGTATTCAGAATATTCTAGCAAACAGAGTAATTTACGACATAATTCTTCAAAATTTTCTGGACGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD130571             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ggctTCTTATGTGGATTTATCGTCATAGACGTAGGACTTTTGAAAAGTTTGCTGAACTACATGAAGCAAGATGCGCTGTTAATGAAACCAAGAAAATTATTCAACGTGGTGGCAGCACATCTGTTCTGAATATTAACAAAAACAGTTAAACCTACTAACCAATTAATTCCTGACAAGTATTCAGAATATTCTAGCAAACAAAGTAATTTACGACATAATTCTTCAAAATTTTCTGGACGTTATCATAATCATCATCACAGTGGGAGACATATTCAATCAGGTTATATCAGTCGAGATTATGGGTATATGGAATTAAACAGAAACTATTCATTTATTGATGATGATCATATACCTGATATTGAAGAATTAGAAGCAGCTGATGAAGTCANATATGATGGAATATAATTGTACATCTGCTAATTATTCAATGGATTCTAATAATGTCAAAGGTCATATTGGTGCAGTGGTTGATAACACTGATTATGATGATGGTAATGAAATGGATGAAGTGGAATATGAAAATGAAATTCTAGGTGCTTGGGATGAATGATAATTCTACTGACCGAAT ATCAATCATCCTACTGGTCAAACACAACGAGGGAAACCACANTNCAACANNATACCTAGATATTTGGATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD187290             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CACAGTGGGAGACATATTCAATCAGGTTATATCAGTCGAGATTATGGGTATATGGCATTAAACAGAAACTATTCATTTATTGATGATGATCATATACCTGATATTGAAGAATTAGAAGCAGCTGATGAAGTCA ATATGATGGAATATAATTGTACATCTGCTAATTATTCAATGGATTTTAATAATGTCAAAGGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD078253             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TCAAAGGTCATATTGGTGCAGTGGTTGATAACACTGATTATGATGATGGTAATGAAATGGATGAAGTGGAATATGAAAATGAAATTCTAGGTGCTTGGGATG ATGATAATTCTACTGACCGAATAATCAATCATCCTACTGGTCAACAACAACGAGGGAACCAACAATTCAACAAAATACCTAGATATTTGGATCCATTTCAGTCAAGAAGTCCAACATCATTTATATTGCCATCAAATAATTATTCTCAGTCAACCATTAGTAATTATAAACAATCACGATTAAATGATTCTAATTATTCATCGAACTCGAAACGAATTCATAAAAACTACACAACTGCTGCTGCAGATGATGATGACGATGACGTTGAAATTGGAAACTATATTATTGACAGTGAAGAGATGAACGAGGAATATTTCTAAGCCTGATGAATCATTATCTAATTAATGATGTGTAAATATCTCATATCTTTTAAAACTCGGATTTAGATAAAGTGATTTGTTTCTTTGTTTTGATTGCCTATAGATTTCTTCCATCTTTTTAATTTCTTTGCGATTTCANAAAGAGAAAACAACCCTGTTATTCTTTAATTTCTATTCCATTAGTAAAATTCATTTATGTTTAATTT ACAGTAATTAAAGTGTANATCANAATTTCATGTGTANCACTATTTGACCTACCTGCNAATAAATCAGTAG  ]
[+] EMBL CD078334             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TCAAAGGCCATATTGGTGCAGTGGTTGATAACACTGATTATGATGATGGTAATGAAATGGATGAAGTGGAATATGAAAATGAAATTCTAGGTGCTTGGGATG ATGATAATTCTACTGACCGAATAATCAATCATCCTACTGGTCAACAACAACGAGGGAACCAACAATTCAACAAAATACCTAGATATTTGGATCCATTTCACTCAAGAAGTCCAACATCATTTATATTGCCATCAAATAATTATTCTCAGTCAACCATTAGTAATTATAAACAATCACGATTAAACGATTCTAATTATTCATCGAACTCGAAACGAATTCATAAAAACTACACAACTGCTGCTGCATATGATGATGACGATGACGTTGAAATTGGAAACTAT                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD075895             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TAATCAATCATCCTACTGGTCAACAACAACGAGGGAACCAACAATTCAACAAAATACCTAGATATTTGGATCCATTTCAGTCAAGAAGTCCAACATCATTTATATTGCCATCAAATAATTATTCTCAGTCAACCATTAGTAATTATAAACAATCACGATTAAATGATTCTAATTATTCATCGAACTCGAAACGAATTCATAAAAACTACACAACTGCTGCTGCAGATGATGATGACGATGACGTTGAAATTGGAAACTATATTATTGACAGTGAAGAGATGAACGAGGAATATTTCTAAGCCTGATGAATCATTATCTAATTAATGATGTGTAAATATCTCATATCTTTTAAAACTCGGATTTAGATAAAGTGATTTGTTTCTTTGTTTTGATTGCCTATAGATTTCTTCCATCTTTTTAATTTCTTTGCGATTTCAAAAAGAGAAAACAACCCTGTTATTCTTTAATTTCTATTCCATTAGTAAAATTCATTTATGTTTAATTTAACAGTAATTAAAGTGTAAATCAAAATTTCATGTGTACAACTATTTGACCTACCTGCAAATAAATCA      ]
[-] EMBL CD072893             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AACTACACAACTGCTGCTGCAGATGATGATGACGATGACGTTGAAATTGGAAGCTATATTATTGACAGTGAAGAGATGAACGAGGAATATTTTTAAGCCTGATGAATCATTATCTAATTAATGATGTGTAAATATCTCATATCTTTTAAAACTCGGATTTAGATAAAGTGATTTGTTTCTTTGTTTTGATTGCCTATAGATTTCTTCCATCTTTTTAATTTCTTT                                                                                                                                                      ]
[-] EMBL CD072892             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TTCTTTAATTTCTATTCCATTAGTAAAATTCATTTATGTTTAATTTAACAGTAATTAAAGTGTAAATCAAAAGTTCATGTGTACAACTATTTGACCTACCTGCAAATAAATCAGTAGTG]


>consensus_10257#0 CTCGAACGCCAGAATTCGGCACGAGGCGACCATTTTCAGAGGAAGAGAAGGCTGATTTTC AATTGCAAGAAGCTGAACGTTTTTCTCATCCATGGTCTCCATTTGTTTATCATATACAAA ATTACTGCGCTGTAGTTGGACCGTTACGCTCAGCTCCAAGTCCTTTAAGTCATGACTTAG CGTTGTATAATTCTGGTCGTAATTGGTCTAGTCACTCAAAGGCTAGAGACCATCCTTTAC TGCGGCTTGACCGTCCTATGTTTGTAAGTTTAGCTGAAATTGTTCGAGACGCTGTGGCTT GTTTGCCCAATGGAGAAGGTACTCGTGCAGATATCACCACCCTTGTACAGAATAGCGGTT TTTTACTGCCAAATGTCAATCCACGCCAGTTACAACAGTGTGTTAGTTCTGCGTTGGATC GATTACAAGGCGAAACTTCTGATCCGTCGGTCTACTTTAATAACAATCGTCGTATGTGGA TTTATCGTCATAGACGTAGGACTTTTGAAAAGTTTGCTGAACTACATGAAGCAAGATGCG CTGTTAATGAAACCAAGAAAATTATTCAACGTGGTGGCAGCACATCTGTTCTGAATATTA ACAAAACAGTTAAACCTACTAACCAATTAATTCCTGACAAGTATTCAGAATATTCTAGCA AACAAAGTAATTTACGACATAATTCTTCAAAATTTTCTGGACGTTATCATAATCATCATC ACAGTGGGAGACATATTCAATCAGGTTATATCAGTCGAGATTATGGGTATATGGAATTAA ACAGAAACTATTCATTTATTGATGATGATCATATACCTGATATTGAAGAATTAGAAGCAG CTGATGAAGTCANATATGATGGAATATAATTGTACATCTGCTAATTATTCAATGGATTCT AATAATGTCAAAGGTCATATTGGTGCAGTGGTTGATAACACTGATTATGATGATGGTAAT GAAATGGATGAAGTGGAATATGAAAATGAAATTCTAGGTGCTTGGGATGATGATAATTCT ACTGACCGAATAATCAATCATCCTACTGGTCAACAACAACGAGGGAACCAACAATTCAAC AAAATACCTAGATATTTGGATCCATTTCAGTCAAGAAGTCCAACATCATTTATATTGCCA TCAAATAATTATTCTCAGTCAACCATTAGTAATTATAAACAATCACGATTAAATGATTCT AATTATTCATCGAACTCGAAACGAATTCATAAAAACTACACAACTGCTGCTGCAGATGAT GATGACGATGACGTTGAAATTGGAAACTATATTATTGACAGTGAAGAGATGAACGAGGAA TATTTCTAAGCCTGATGAATCATTATCTAATTAATGATGTGTAAATATCTCATATCTTTT AAAACTCGGATTTAGATAAAGTGATTTGTTTCTTTGTTTTGATTGCCTATAGATTTCTTC CATCTTTTTAATTTCTTTGCGATTTCANAAAGAGAAAACAACCCTGTTATTCTTTAATTT CTATTCCATTAGTAAAATTCATTTATGTTTAATTTAACAGTAATTAAAGTGTAAATCAAA ATTTCATGTGTACAACTATTTGACCTACCTGCAAATAAATCAGTAGTG



consensusID : consensus_10257#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 891
fasta sequence
                              [TACAGCTCAGATTTGTGAACATGTTCGTGAATGGCAAGCTTGCAATCAAAACAGGTTAAGAAAGGTTGGGAGAGGTTGCAGCTGGATCGATCGGATTTTCTTACCGCGGAAAGTTCACCCGAAAGTGTCATACGTAACAGTTCTCGCCGACTTGTTTGTCCGAGACCGTTTGTCAATTTAAAACCGCGCATTCATCAGTGGTGTTGGCTTCTGTATCCTCCATCAGGAATAAACCCTAAAGTTGACCAAGAATGGATCCAAAAATTTGAACTGGAAACCAGAGAGTTGACGAGTTTATTTTCTGATTGGCTTCGAGCTCCTCGTGGTCTTGGTGGATTGACAGATGCAGTTTTGTCGATATCAGATTCCTTGCTTGTGAGTGGGAGGAATANAGTCAAACCCAATAAGAATACNAATCCTTCAATTAAGGGAAAACAGTATTCTGAAGAATCTGATGGTGACGGTGGTGTAGAAGACTCAGAAATTGATGAAGGTGAAAGATGTCTGCGAATAGACGAATGCCAAGCTGAGTCAGATGATGGCGATAAGAAAAGTGGAGACATCCAAAAGATTAGAAGAAACGTTTCATCAAAACACTCTCAACAGTCAATATTCCACGAAGATAATCGACTTTATTCCGACGATGATATCCCTCCACCACTTTATCCAACTAGATGGAAACTCCGACCATTTTCAGAGGAAGAG-AGGCTGATTTTCAATTGCAAGAAGCTGAACGTTTTTCTCATCCATGGTCTCCATTTGTTTATCATATACAAAATTACTGCGCTGTAGTTGGACCGTTACGCTCAGCTCCAAGTCCTTTAAGTCATGACTTAGCGTTGTATAATTCTGGTCGTAATTGGTCTAGTCACTCAAAGGCCAGAGACCATC]

[+] EMBL CD071798             [TACAGCTCAGATTTGTGAACATGTTCGTGAATGGCAAGCTTGCAATCAAAACAGGTTAAGAAAGGTTGGGAGAGGTTGCAGCTGGATCGATCGGATTTTCTTACCGCGGAAAGTTCACCCGAAAGTGTCATACGTAACAGTTCTCGCCGACTTGTTTGTCCGAGACCGTTTGTCAATTTAAAACCGCGCATTCATCAGTGGTGTTGGCTTCTGTATCCTCCATCAGGAATAAACCCTAAAGTTGACCAAGAATGGATCCAAAAATTTGAACTGGAAACCAGAGAGTTGACGAGTTTATTTTCTGATTGGCTTCGAGCTCCTCGTGGTCTTGGTGGATTGACAGATGCAGTTTTGTCGATATCAGATTCCTTGCTTGTGAGTGGGAGGAATANAGTCAAACCCAATAAGAATACNAATCCTTCAATTAAGGGAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD190470             [                                                                                                                                                                                         gcttcTTCATCAGTGGTGTTGGCTTCTGTATCCTCCATCAGGAATAAACCCTAAAGTTGACCAAGAATGGATCCAAAAATTTGAACTGGAAACCAGAGAGTTGACGAGTTTATTTTCTGATTGGCTTCGAGCTCCTCGTGGTCTTGGTGGATTGACAGATGCAGTTTTGTCGATATCAGATTCCTTGCTTGTGAGTGGGAGGAATAAAGTCAAACCCAATAAGAATACAAATCCTTCAATTAAGGAAAAACAGTATTCTGAAGAATCTGATGGTGACGGTGGTGTAGAAGACTCAGAAATTGATGAAGGTGAAAGATGTCTGCGAATAGACGAATGCCAAGCTGAGTCAGATGATGGCGATAAGAAAAGTGGAGACATCCAAAAGATTAGAAGAAACGTTTCATCAAAACACTCTCAACAGTCAATATTCCACGAAGATAATCGACTTTATTCCGACGATGATATCCCTCCACCACTTTATCCAACTAGATGGAAACTCCGACCATTTTCAGAGGAAGAG AGGCTGAT                                                                                                                                                                                  ]
[-] EMBL CD148337             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GAAGAAACGTTTCATCAAAACACTCTCAACAGTCAATATTCCACGAGGATAATCGACTTTATTCCGACGATGATATCCCTCCACCACTTTATCCAACTAGATGGAAACTCCGACCATTTTCAGAGGAAGAGAAGGCTGATTTTCAATTGCAAGAAGCTGAACGTTTTTCTCATCCATGGTCTCCATTTGTTTATCATATACAAAATTACTGCGCTGTAGTTGGACCGTTACGCTCAGCTCCAAGTCCTTTAAGTCATGACTTAGCGTTGTATAATTCTGGTCGTAATTGGTCTAGTCACTCAAAGGCCAGAGACCATC]


>consensus_10257#1 TACAGCTCAGATTTGTGAACATGTTCGTGAATGGCAAGCTTGCAATCAAAACAGGTTAAG AAAGGTTGGGAGAGGTTGCAGCTGGATCGATCGGATTTTCTTACCGCGGAAAGTTCACCC GAAAGTGTCATACGTAACAGTTCTCGCCGACTTGTTTGTCCGAGACCGTTTGTCAATTTA AAACCGCGCATTCATCAGTGGTGTTGGCTTCTGTATCCTCCATCAGGAATAAACCCTAAA GTTGACCAAGAATGGATCCAAAAATTTGAACTGGAAACCAGAGAGTTGACGAGTTTATTT TCTGATTGGCTTCGAGCTCCTCGTGGTCTTGGTGGATTGACAGATGCAGTTTTGTCGATA TCAGATTCCTTGCTTGTGAGTGGGAGGAATANAGTCAAACCCAATAAGAATACNAATCCT TCAATTAAGGGAAAACAGTATTCTGAAGAATCTGATGGTGACGGTGGTGTAGAAGACTCA GAAATTGATGAAGGTGAAAGATGTCTGCGAATAGACGAATGCCAAGCTGAGTCAGATGAT GGCGATAAGAAAAGTGGAGACATCCAAAAGATTAGAAGAAACGTTTCATCAAAACACTCT CAACAGTCAATATTCCACGAAGATAATCGACTTTATTCCGACGATGATATCCCTCCACCA CTTTATCCAACTAGATGGAAACTCCGACCATTTTCAGAGGAAGAGAGGCTGATTTTCAAT TGCAAGAAGCTGAACGTTTTTCTCATCCATGGTCTCCATTTGTTTATCATATACAAAATT ACTGCGCTGTAGTTGGACCGTTACGCTCAGCTCCAAGTCCTTTAAGTCATGACTTAGCGT TGTATAATTCTGGTCGTAATTGGTCTAGTCACTCAAAGGCCAGAGACCATC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10257#0      CTCGAACGCCAGAATTCGGCACGAGGCGACCATTTTCAGAGGAAGAGAAGGCTGATTTTC 60
consensus_10257#1      ------------------------------------------------------------
                                                                                   

consensus_10257#0      AATTGCAAGAAGCTGAACGTTTTTCTCATCCATGGTCTCCATTTGTTTATCATATACAAA 120
consensus_10257#1      ------------------------------------------------------------
                                                                                   

consensus_10257#0      ATTACTGCGCTGTAGTTGGACCGTTACGCTCAGCTCCAAGTCCTTTAAGTCATGACTTAG 180
consensus_10257#1      ------------------------------------------------------------
                                                                                   

consensus_10257#0      CGTTGTATAATTCTGGTCGTAATTGGTCTAGTCACTCAAAGGCTAGAGACCATCCTTTAC 240
consensus_10257#1      ------------------------------------------------------------
                                                                                   

consensus_10257#0      TGCGGCTTGACCGTCCTATGTTTGTAAGTTTAGCTGAAATTGTTCGAGACGCTGTGGCTT 300
consensus_10257#1      ------------------------------------------------------------
                                                                                   

consensus_10257#0      GTTTGCCCAATGGAGAAGGTACTCGTGCAGATATCACCACCCTTGTACAGAATAGCGGTT 360
consensus_10257#1      ----------------------------------------TACAGCTCAGATTTGTGAAC 20
                                                                   *  **** * * *   

consensus_10257#0      TTTTACTGCCAAATGTCAATCCACGCCAGTTACAACAGTGTGTTAGTTCTGCGTTGGATC 420
consensus_10257#1      A--TGTTCGTGAATGGCAAGCTT--GCAATCAAAACAG---GTTAAGAAAGGTTGGGAGA 73
                          *  *    **** *** *     ** * * *****   ****     *  * ***  

consensus_10257#0      GATTACAAGGCGAAACTTCTGATCCGTCGGTCTACTTTAATAACAATCGTCGTATGTGGA 480
consensus_10257#1      GGTTGCAG---------CTGGATCGATCGGATTTTCTTACCGCGGAAAGTT-CACCCGAA 123
                       * ** **             ****  ****  *   ***      *  **   *   * *

consensus_10257#0      TTTATCGTCATAGACGTAGGACTTTTGAAAAGTTTGCTGAACTACATGAAGCAAGATGCG 540
consensus_10257#1      AGTGTCAT-----ACGTAACAGTTCTCGCCGACTTGTTTGTC---------CGAGACCGT 169
                         * ** *     *****  * ** *       *** *   *         * ***    

consensus_10257#0      CTGTTAATGAAACCAAGAAAATTATTCAACGTGGTGGCAGCACATCTGTTCTGAATATTA 600
consensus_10257#1      TTGTCAATTTAAAACCGCGCATTCATCA--GTGGTGTTGGCTTCTGTATCCTCCATCAGG 227
                        *** ***  **    *   ***  ***  ******   **   * * * **  **    

consensus_10257#0      ACAAAACAGTTAAACCTACTAACCAATTAATTCCTGACAAGTATTCAGAATATTCTAGCA 660
consensus_10257#1      AATAAACCCTAAAGTTGACCAAG-AATGGATCC-----AAAAATTTGAA-----CTGGAA 276
                       *  ****  * **    ** **  ***  ** *     **  ***   *     ** * *

consensus_10257#0      AACAAAGTAATTTACGACATAATTCTTCAAAATTTTCTGGACGTTATCATAATCATCATC 720
consensus_10257#1      ACCAGAG-AGTTGACGAGTTTATT-TTCTGATTGGCTTCGAGCTCCTCGTGGTC-TTGGT 333
                       * ** ** * ** ****  * *** ***  * *    * **  *  ** *  ** *    

consensus_10257#0      ACAGTGGGAGACATATTCAATCAGGTTATATCAGTCGAGATTATGGGTATATGGAATTAA 780
consensus_10257#1      GGATTGACAGATGCAGTTTTGTCGATATCAGATTCCTTGCTTGTGAGTGGGAGGAATANA 393
                         * **  ***   * *      * *   *     *  * ** ** **    *****  *

consensus_10257#0      ACAGAAACTATTCATTTATTGATGATGATCATATACCTGATATTGAAGAATTAGAAGCAG 840
consensus_10257#1      GTCAAACCCA-----------ATAAGAATACNAATCCTTCAATTAAGGGAAAACAGTATT 442
                           ** * *           ** *  **   *  ***   *** * * *  * *     

consensus_10257#0      CTGATGAAGTCANATATGATGGAATATAATTGTACATCTGCTAATTATTCAATGGATTCT 900
consensus_10257#1      CTGAAGAATCTGATGGTGACGG--TGGTGTAGAAGACTCAGAAATTG----ATGAAGGTG 496
                       **** ***        *** **  *    * * * *      ****     *** *    

consensus_10257#0      AATAATGTCAAAGGTCATATTGGTGCAGTGGTTGATAACACTGATTATGATGATGGTAAT 960
consensus_10257#1      AAAGATGTCTGCGAATAGACGAATGCCAAGCTGAGTCAGA-TGATGGCGATAAGAAAAGT 555
                       **  *****   *   * *    ***   * *   * * * ****   *** *    * *

consensus_10257#0      GAAATGGATGAAGTGGAATATGAAAATGAAAT--TCTAGGTGCTTGGGATGATGATAATT 1018
consensus_10257#1      GGAG-ACATCCAAAAGATTAGAAGAAACGTTTCATCAAAACACTCTCAACAGTCAATATT 614
                       * *    **  *   ** **  * **     *  ** *    **    *   * *  ***

consensus_10257#0      CTACTGACCGAATAATCAATCATCCTACTGGTCAACAACAACGAGGGAACCAACAATTCA 1078
consensus_10257#1      CCACGAA---GATAATCGACTTTATT-----CCGACGATGAT-ATCCCTCCACCACTTTA 665
                       * **  *    ****** *   *  *      * ** *  *  *     *** ** ** *

consensus_10257#0      ACAAAATACCTAGATATTTGGATCCATTTCAGTCAAGAAGTCCAACATCATTTATATTGC 1138
consensus_10257#1      TCCAACTAGATGGAAACTCCGACCATTTTCAG--AGGAAGAGAGGCTGATTTTCAATTGC 723
                        * ** **  * ** * *  ** *  ******  * ****     *    ***  *****

consensus_10257#0      CATCAAATAA---TTATTCTCAGTCA--ACCATTAGTAATTATAAACAATCACGATTAAA 1193
consensus_10257#1      AAGAAGCTGAACGTTTTTCTCATCCATGGTCTCCATTTGTTTATCATATACAAAATTACT 783
                        *  *  * *   ** ******  **    *   * *  **    * *  **  ****  

consensus_10257#0      TGATTCTAATTAT-TCATCGAACTCGAAACGAATTCATAAAAACTACACAACTGCTGCTG 1252
consensus_10257#1      GCGCTGTAGTTGGACCGTTACGCTCAGCTCCAAGTCCTTTAAGTCATG-ACTTAGCGTTG 842
                           * ** **    * *    ***    * ** ** *  **   *   *  *   * **

consensus_10257#0      CAGATGATGATGACGATGACGTTGAAATTGGAAACTATATTATTGACAGTGAAGAGATGA 1312
consensus_10257#1      TA--TAATTCTG--------GTCGTAATTGGT--CTA-GTCACTCAAAGGCCAGAGACCA 889
                        *  * **  **        ** * ******   ***  * * * * **   *****  *

consensus_10257#0      ACGAGGAATATTTCTAAGCCTGATGAATCATTATCTAATTAATGATGTGTAAATATCTCA 1372
consensus_10257#1      TC---------------------------------------------------------- 891
                        *                                                          

consensus_10257#0      TATCTTTTAAAACTCGGATTTAGATAAAGTGATTTGTTTCTTTGTTTTGATTGCCTATAG 1432
consensus_10257#1      ------------------------------------------------------------
                                                                                   

consensus_10257#0      ATTTCTTCCATCTTTTTAATTTCTTTGCGATTTCANAAAGAGAAAACAACCCTGTTATTC 1492
consensus_10257#1      ------------------------------------------------------------
                                                                                   

consensus_10257#0      TTTAATTTCTATTCCATTAGTAAAATTCATTTATGTTTAATTTAACAGTAATTAAAGTGT 1552
consensus_10257#1      ------------------------------------------------------------
                                                                                   

consensus_10257#0      AAATCAAAATTTCATGTGTACAACTATTTGACCTACCTGCAAATAAATCAGTAGTG 1608
consensus_10257#1      --------------------------------------------------------
                                                                               




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)