These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10267#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 571 fasta sequence [TCAGGTCAACTAATCAACAGGAATTTCTTGAAGAACATATCAGTGACAATGTGGACAATAATAGAACTTATCCTATTGAGACATCATTTAGATATCACACATTAACAGATTCTAATCAACCTAATGAGTTGTTGATAAATTCAAGACATGATATGCCTGTTACAGTAATACCATTGGAAACGTCAGCTTCAACTAGGTTTTATCAATCATTATCAGAAAGCAATAATCAGCGTACTCTGATTGACAACATTTCATCAGAATTATCATCATCGTCTTCTGTTCAAAGCAAAATATCAAGGAACAAAGATTTGAAGTCTTCAGCAAAATCAAACAGTTTGATTCAACAA-TCGACTGATTTAGATTTATTTGATTTTTTAAATACTAAGTCAGTCAACTCAGATCA-AATCACCAATCCATTGGAACGAGACGTAGTGAGACGAGATTCTTTACTATCTACTAGCGATAAAATTGAAGAAGATCAGAGTAGTGGTTATGAAACATCTCTATCGACTAAACATTCTGGCACACCTATTAAAACAAGTAAAGGGGAGGAGAGTTTCACTGTAACAGC] [+] EMBL AI067207 [TCAGGTCAACTAATCAACAGGAATTTCTTGAAGAACATATCAGTGACAATGTGGACAATAATAGAACTTATCCTATTGAGACATCATTTAGATATCACACATTAACAGATTCTAATCAACCTAATGAGTTGTTGATAAATTCAAGACATGATATGCCTGTTACAGTAATACCATTGGAAACGTCAGCTTCAACTAGGTTTTATCAATCATTATCAGAAAGCAATAATCAGCGTACTCTGATTGACAACATTTCATCAGAATTATCATCATCGTCTTCTGTTCAAAGCAAAATATCAAGGAACAAAGATTTGAAGTCTTCAGCAAAATCAAACAGTTTGATTCAACAA TCGACTGATTTAGATTTATTTGATTTTTTAAATACTAAGTCAGTCAACTCAGATCA AATCACCAATCCATTGGAACGAGACGTAGTGAGACGAGATTCTTTACTATCTACTAGCGATAAAATTGAAGAAGATCAGAGTAGTGGTTATGAAACATCTCTATCGACTAAACATTCTGGCACACCTATTAAAACAAGTAAAGGGGAGGAGAGTTTCACTGTAACAGC] [+] EMBL AI067822 [TCAGGTCAACTAATCAACAGGAATTTCTTGAAGAACATATCAGTGACAATGTGGACAATAATAGAACTTATCCTATTGAGACATCATTTAGATATCACACATTAACAGATTCTAATCAACCTAATGAGTTGTTGATAAATTCAAGACATGATATGCCTGTTACAGTAATACCATTGGAAACGTCAGCTTCAACTAGGTTTTATCAATCATTATCAGAAAGCAATAATCAGCGTACTCTGATTGACAACATTTCATCAGAATTATCATCATCGTCTTCTGTTCAAAGCAAAATATCAAGGAACAAAGATTTGAAGTCTTCAGCAAAATCAAACAGTTTGATTCAACAA TCGACTGATTTAGATTTATTTGATTTTTTAAATACTAAGTCAGTCAACTCAGATCA AATCACCAATCCATTGGNACGAGACGTAGTGAGACGAGA ] [+] EMBL AI067737 [TCAGGTCAACTAATCAACAGGAATTTCTTGAAGAACATATCAGTGACAATGTGGACAATAATAGAACTTATCCTATTGAGACATCATTTAGATATCACACATTAACAGATTCTAATCAACCTAATGAGTTGTTGATAAATTCAAGACATGATATGCCTGTTACAGTAATACCATTGGAAACGTCAGCTTCAACTAGGTTTTATCAATCATTATCAGAAAGCAATAATCAGCGTACTCTGATTGACAACATTTCATCAGAATTATCATCATCGTCTTCTGTTCAAAGCAAAATATCAAGGAACAAAGATTTGAAGTCTTCAGCAAAATCAAACAGTTTGATTCAACAA TCGACTGATTTAGATTTATTTGATTTTTTAAATACTAAGTCAGTCAACTCAGATCA AATCACCAATCCATTGGAACGAGACGTAGTGAGACGAGATTCTTTACTA ] [+] EMBL AI067900 [ CAACTAATCAACAGGAATTTCTTGAAGAACATATCAGTGACAATGTGGACAATAATAGAACTTATCCTATTGAGACATCATTTAGATATCACACATTAACAGATTCTAATCAACCTAATGAGTTGTTGATAAATTCAAGACATGATATGCCTGTTACAGTAATACCATTGGAAACGTCAGCTTCAACTAGGTTTTATCAATCATTATCAGAAAGCAATAATCAGCGTACTCTGATTGACAACATTTCATCAGAATTATCATCATCGTCTTCTGTTCAAAGCAAAATATCAAGGAACAAAGATTTGAAGTCTTCAGCAAAATCAAACAGTTTGATTCAACAA TCGACTGATTTAGATTTATTTGATTTTTTAAATACTAAGTCAGTCAACTCAGATCA AATCACCAATCCATTGGAACGAGACGTAGTGAGACGAGATTCTTTACTATCTACTAGCGATAAAATTGAAGAAGATCAGAGTAGTGGTTATGAAACATCTCTATCGACTAAACATTCTGGCACACCTATTAAAACAAGTAAAGGGGAAGAGAGTTTCACTGTA ] [+] EMBL AI067362 [ CAACTAATCAACAGGAATTTCTTGAAGAACATATCAGTGACAATGTGGACAATAATAGAACTTATCCTATTGAGACATCATTTAGATATCACACATTAACAGATTCTAATCAACCTAATGAGTTGTTGATAAATTCAAGACATGATATGCCTGTTACAGTAATACCATTGGAAACGTCAGCTTCAACTAGGTTTTATCAATCATTATCAGAAAGCAATAATCAGCGTACTCTGATTGACAACATTTCATCAGAATTATCATCATCGTCTTCTGTTCAAAGCAAAATATCAAGGAACAAAGATTTGAAGTCTTCAGCAAAATCAAACAGTTTGATTCAACAA TCGACTGATTTAGATTTATTTGATTTTTTAAATACTAAGTCAGTCAACTCAGATCA AATCACCAATCCATTGGAACGAGACGTAGTGAGACGAGATTCTTTACTATCTACTAGCGATAAAATTGAAGAAGATCAGAGTAGTGGTTATGAAACATCTCTATCGACTAAACAATCTGGCACACCTATTTAAACAAGTAAAGGGGATGAGAG ] [+] EMBL AI067154 [ CAACTAATCAACAGGAATTTCTTGAAGAACATATCAGTGACAATGTGGACAATAATAGAACTTATCCTATTGAGACATCATTTAGATATCACACATTAACAGATTCTAATCAACCTAATGAGTTGTTGATAAATTCAAGACATGATATGCCTGTTACAGTAATACCATTGGAAACGTCAGCTTCAACTAGGTTTTATCAATCATTATCAGAAAGCAATAATCAGCGTACTCTGATTGACAACATTTCATCAGAATTATCATCATCGTCTTCTGTTCAAAGCAGAATATCAAGGAACAAAGATTTGAAGTCTTCAGCAAAATCAAACAGTTTGATTCAACAA TCGACTGATTTAGATTTATTTGATTTTTTAAATACTAAGTCAGTCAACTCAGATCA AATCACCAATCCATTGGAACGAGACGTAGTGAGACGAGATTCTTTACTATCTACTAGCGATAAAAT ] [+] EMBL AI067371 [ CAACTAATCAACAGGAATTTCTTGAAGAACATATCAGTGACAATGTGGACAATAATAGAACTTATCCTATTGAGACATCATTTAGATATCACACATTAACAGATTCTAATCAACCTAATGAGTTGTTGATAAATTCAAGACATGATATGCCTGTTACAGTAATACCATTGGAAACGTCAGCTTCAACTAGGTTTTATCAATCATTATCAGAAAGCAATAATCAGCGTACTCTGATTGACAACATTTCATCAGAATTATCATCATCGTCTTCTGTTCAAAGCAAAATATCAAGGAACAAAGATTTGAAGTCTTCAGCAAAATCAAACAGTTTGATTCAACAA TCGACTGATTTAGATTTATTTGATTTTTTAAATACTAAGTCAGTCAACTCAGATCA AATCACCAATCCATTGGAACGAGACGTAGTGAGACGAGATTCTTTA ] [+] EMBL AI068314 [ CAACTAATCAACAGGAATTTCTTGAAGAACATATCAGTGACAATGTGGACAATAATAGAACTTATCCTATTGAGACATCATTTAGATATCACACATTAACAGATTCTAATCAACCTAATGAGTTGTTGATAAATTCAAGACATGATATGCCTGTTACAGTAATACCATTGGAAACGTCAGCTTCAACTAGGTTTTATCAATCATTATCAGAAAGCAATAATCAGCGTACTCTGATTGACAACATTTCATCAGAATTATCATCATCGTCTTCTGTTCAAAGCAAAATATCAAGGAACAAAGATTTGAAGTCTTCAGCAAAATCAAACAGTTTGATTCAACAA TCGACTGATTTAGATTTATTTGATTTTTTAAATACTAAGTCAGTCAACTCAGATCANNATCA CAATCCATTGGNACGAGACGT ] [+] EMBL AI067462 [ CAACTAATCAACAGGAATTTCTTGAAGAACATATCAGTGACAATGTGGACAATAATAGAACTTATCCTATTGAGACATCATTTAGATATCAGACATTAACAGATTCTAATCAACCTAATGAGTTGTTGATAAATTCAAGACATGATATGCCTGTTACAGTAATACCATTGGAAACGTCAGCTTCAACTAGGTTTTATCAATCATTATCAGAAAGCAATAATCAGCGTACTCTGATTGACAACATTTCATCAGAATTATCATCATCGTCTTCTGTTCAAAGCAAAATATCAAGGAACAAAGATTTGAAGTCTTCAGCAAA ] [+] EMBL AI067449 [ CAACTAATCAACAGGAATTTCTTGAAGAACATATCAGTGACAATGTGGACAATAATAGAACTTATCCTATTGAGACATCATTTAGATATCAGACATTAACAGATTCTAATCAACCTAATGAGTTGTTGATAAATTCAAGACATGATATGCCTGTTACAGTAATACCATTGGAAACGTCAGCTTCAACTAGGTTTTATCAATCATTATCAGAAAGCAATAATCAGCGTACTCTGATTGACAACATTTCATCAGAATTATCATCATCGTCTTCTGTTCAAAGCAAAATATCAAGGAACAAAGATTTGAAGTCTTCAGCAAA ] [+] EMBL AI068313 [ CAACTAATCAACAGGAATTTCTTGAAGAACATATCAGTGACAATGTGGACAATAATAGAACTTATCCTATTGAGACATCATTTAGATATCACACATTAACAGATTCTAATCAACCTAATGAGTTGTTGATAAATTCACGACATGATATGCCTGTTACAGTATTACCATTGGAAACGTCAGCTTCAACTATGTTTTATCAAGCATTAGCAGAAAGCAATAATCAGCGTACTCTGATTGACAACATTTCATCAGAATTATCATCATCGTC ] [+] EMBL CD115492 [ TTTCTTGAAGAACATATCAGTGACAATGTGGACAATAATAGAACTTATCCTATTGAGACATCATTTAGATATCACACATTAACAGATTCTAATCAACCTAATGATTTGTTGATAAATTCAAGACATGATATGCCTGTGACAGTAATACCATTGGAAACGTCAGCTTCAACTAGGTTTTATCAATCATTATCAGAAAGCAATAATCAGCGTACTCTGATTGACAACATTTCATCAGAATTATCATCATCGTCTTCTGTTCAAAGCAAAATATCAAGGAACAAAGATTTGAAGTCTTCAGCAAAATCAAACAGTTTGATTCAACAACTCGACTGATCTAGATTTATTTGATTTCTTAAATACTAAGTCAGTCAACTCAGATCA AATCACCAATCCATTGGAA ] [+] EMBL AI067125 [ TAGAACTTATCCTATTGAGACATCATTTAGATATCACACATTAACAGATTCTAATCAACCTAATGAGTTGTTGATAAATTCAAGACATGATATGCCTGTTACAGTAATACCATTGGAAACGTCAGCTTCAACTAGGTTTTATCAATCATTATCAGAAAGCAATAATCAGCGTACTCTGATTGACAACATTTCATCAGAATTATCATCATCGTCTTCTGTTCAAAGCAAAATATCAAGGAACAAAGATTTGAAGTCTTCAGCAAAATCAAACAGTTTGATTCAACAA TC ] [+] EMBL AI067054 [ TAGAACTTATCCTATTGAGACATCATTTAGATATCACACATTAACAGATTCTAATCAACCTAATGAGTTGTTGATAAATTCAAGACATGATATGCCTGTTACAGTAATACCATTGGAAACGTCAGCTTCAACTAGGTTTTATCAATCATTATCAGAAAGCAATAATCAGCGTACTCTGATTGACAACATTTCATCAGAATTATCATCATCGTCTTCTGTTCAAAGCAAAATATCAAGGAACAAAGATTTGAAGTCTTCAGCAAAA ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||