These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10315#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 1836 fasta sequence [CAAGCTCCATTCCGGCAACTTATGACCCATCGTGGTGTACCTCAACTCCATTTCATTCTCCAAACTTCGCTTGTGCTTATACTTATTCACCTACGGTCCCACCCCGTCAACCGGTCATGTTCGACCCAAGTCCACAGAGGCATATGATGCCAAACGTTTCGTATCCTACATATGGTTCTCCACAGTTGCCGTTGCATATGNCAAGTCAGTTAGGGTGTAACTGGAATGCAGCTAGACCTACTTATGGTTATCCGGTTAACGGAGGTGCGGTCCAGTCGTTTGGTATGTGGCCAGACGGAAGATCATCTGTTCATCCCAATGGTTTGGCAGTGACGGGTCCACGGTTTCCATTCCAGAGTACTTTAGATTCTCCAAACACAGTGGCTAGTGAAAATACTGCGAATACTCCAATTTCTAAAGAAGTCCTACAGCAACCGCCTGCTAGTTTTCAGGACAAAGGAGTAAAAGAGCAGTGGAGTGACGAACTCAAAGAGTACGTCCAGCGAGCATTTTGCAGCATTGATACAAGTGAGGAAAAAGATCAGATGGAACGGATTTTAAAAGAAAAATTGGAGTACGTTTTTAGAAATAACATCAAGGTCGATTGGAAGACAGAAAATATTCCGACTATCCCCAGTCGTGCGATTGCTAGTTTCCGTAAATCCTTTAATATCAGGGGCAATTCTGTCAATGTCGTGCGACCTGTTCAACTTCCCGGTCCTCGTGGACTTCGCCCAACGGGTCCATCAAGGGGAGCTCCTGCACGTCTTCCTGTTGGGCTTTTGTCGAGAGGTGGCCGCAATGTGTTTTCGTCTTCAGTTGTTAAGAGTATATCACCATCCAAAAAATTGCCATCGAAATCTCGCTCACCTAGTCGTTCTCCTGTTTCCAAACCTTTAAAAGATTGGCAGAGAAAGCGTTTGTATAGATCCAGGTCTAGTTCATCCTCAGAATCACGTGGCTCCCCTCATTCTTCATCCTCAAGTAGTTTCAGGACAAAACGCCTTCGGCGTCGGGACTCTCGGTCGCGCTCTGGTTCTCGACATGCACAGCGAAAGACGAATGATGTAAAGGATTCTCAAAAAAGTACACCGCAGTTAGCCACCAGGGGGAATTCCAAAGGTAGACGACGGAGGCGTGGTGGTGCTTCAAACGCCGACTCAAGTACAGACGCAAATACTTCTAATGAAGATGTAACAGCTGCAAGGGGTCGTGGACGTGGCAATTGGCGTAGTAAACGTGGAAGCATTTCAAAGCATACTCCTCCAAGTGAATCTCGCCTTACACAACGAGCCAGTAGATTTAAAGATCATCTGGTGCAGTCACCTATTGGATCAGGCTCCATTGCACGGACAACCAGTCAGCTGCTTTCGAATTACACTGACGAACGTGATGATTTAGCTGTTGATTTCGGTAGCTGTCAAATCGTTGGTACCATGCAAGAAATAGAAAAACAATACTTGAGACTGACTCGAGCTCCAGATCCTACAGAAGTGCGACCCTTAGCAATTTTGAAGCTTTCTTTGGAGCACGTCAAAGAAAAATGGCGTTCAAATACCGATTACCACTGGGTGTGTGAGCAGTTCAAAAGTATACGTCAAGACTTAACTGTACAAGGTATCGAAGATGATTTTGCAGTATCGGTTTATGAAGCACATGCAGATGTAGCC-TTAG-AGCTGGTGATTTTG-AGAGTTTCATCAATGTCAAAGTCAGTTGCTTCGTCTTCATAAAGAAGGCTTAGGTGTTAGTAGGCTGCTCGAATTTACTGCCTACAGACTTCTTTA-TACATCTTCACTCTCGATATTTTAGGTAAGTTAATCGCAATTCGAAAATTGC] [+] EMBL CD142449 [CAAGCTCCATTCCGGCAACTTATGACCCATCGTGGTGTACCTCAACTCCATTTCATTCTCCAAACTTCGCTTGTGCTTATACTTATTCACCTACGGTCCCACCCCGTCAACCGGTCATGTTCGACCCAAGTCCACAGAGGCATATGATGCCAAACGTTTCGTATCCTACATATGGTTCTCCACAGTTGCCGTTGCATATGNCAAGTCAGTTAGGGTGTAACTGGAATGCAGCTAGACCTACTTATGGTTATCCGGTTAACGGAGGTGCGGTCCAGTCGTTTGGTATGTGGCCAGACGGAAGATCATCTGTTCATCCCAATGGNTTGGC ] [-] EMBL CD198501 [ AAGCTCCATTCCGGCAACTTATGACCCATCGTGGTGTACCTCAACTCCATTTCATTCTCCAAACTTCGCTTGTGCTTATACTTATTCACCTACGGTCCCACCCCGTCAACCGGTCATGTTCGACCCAAGTCCACAGAGGCATATGATGCCAAACGTTTCGTATCCTTCATATGGTTCTCCACAGTTGCCGTTGCATAAGCAAAGTCAGTTAGGGTGTAACTGGAATGCAGCTAGACCTACTTATGGTTATCCGGTTAACGGAGGTGCGGTCCAGTCGTTTGGTATGTGGCCAGACGGAAGATCATCTGTTCATCCCAATGGTTTGGCAGTGACGGGTC ] [+] EMBL CD142448 [ CTACTTATGGTTATCCGGTTAACGGAGGTGCGGTCCAGTCGTTTGGTATGTGGCCAGACGGAAGATCATCTGTTCATCCCAATGGTTTGGCAGTGACGGGT ] [+] EMBL CD142369 [ CTACTTATGGTTATCCGGTTAACGGAGGTGCGGTCCAGTCGTTTGGTATGTGGCCAGACGGAAGATCATCTGTTCATCCCAATGGTTTGGCAGTGACGGGT ] [-] EMBL CD177939 [ TTATCCGGTTAACGGAGGTGCGGTCCAGTCGTTTGGTATGTGGCCAGACGGAAGATCATCTGTTCATCCCAATGGTTTGGCAGTGACGGGTCCACGGTTTCCATTCCAGAGTACTTTAGATTCTCCAAACACAGTGGCTAGTGAAAATACTGCGAATACTCCAATTTCTAAAGAAGTCCTACAGCAACCGCCTGCTAGTTTTCAGGACAAAGGAGTAAAAGAGCAGTGGAGTGACGAACTCAAAGAGTACGTCCAGCGAGCATTTTGCAGCATTGATACAAGTGAGGAAAAAGATCAGATGGAACGGATTTTAAAAGAAAAATTGGAGTACGTTTTTAGAAATAACATCAAGGTCGATTGGAAGACAGAAAATATTCCGACTATCCCCAGTCGTGCGATTGCTAGTTTCCGTAAA ] [-] EMBL CD125945 [ TGATACAAGTGAGGAAAAAGATCAGATGGAACGGATTTTAAAAGAAAAATTGGAGTACGTTTTTAGAAATAACATCAAGGTCGATTGGAAGACAGAAAATATTCCGACTATCCCCAGTCGTGCGATTGCTAGTTTCCGTAAATCCTTTAATATCAGGGGCAATTCTGTCAATGTCGTGCGACCTGTTCAACTTCCCGGTCCTCGTGGACTTCGCCCAACGGGTCCATCAAGGGGAGCTCCTGCACGTCTTCCTGTTGGGCTTTTGTCGAGAGGTGGCCGCAATGTGTTTTCGTCTTCAGTTGTTAAGAGTATATCACCATCCAAAAAATTGCCATCGAAATCTCGCTCACCTAGTCGTTCCCCTGTTTCCAAACCTTTAAAAGATTGGCAGAGAAAGCGTTTGTATAGATCCAGGTCTAGTTCATCCTCAGAATCACGTGGCTCCCCTCATTCTTCATCCTCAAGTAGTTTCAGGACAAAACGCCTTCGGCGTC GGACTCTC GTCGCGCTCTG ] [-] EMBL CD191252 [ GATCAGATGGAACGGGTTTTAAAAGAAAAATTGGAGTACGTTTTTAGAAATAACATCAAGGTCGATTGGAAGACAGAAAATATTCCGACTATCCCCAGTC ] [-] EMBL CD188933 [ AGATGGAACGGATTTTAAAAGAAAAATTGGAGTACGTTTTTAGAAATAACATCAAGGTCGATTGGAAGACAGAAAATATTCCGACTATCCCCAGTCGTGCGATTGCTAGTTTCCGTAAATCCTTTAATATCAGGGGCAATTCTGTCAATGTCGTGCGACCTGTTCAACTTCCCGGTCCTCGTGGACTTCGCCCAACGGGTCCATCAAGGGGAGCTCCTGCACGTCTTCCTGTTGGGCTTTTGTCGAGAGGTGGCCGCAATGTGTTTTCGTCTTCAGTTGTTAAGAGTATATCACCATCCAAAAAATTGCCATCGAAATCTCGCTCACCTAGTCGTTCTCCTGTTTCCAAACCTTTAAAAGATTGGCAGAGAAAGCGTT ] [-] EMBL CD178581 [ GAAAAATTGGAGTACGTTTTTAGAAATAACATCAAGGTCGATTGGAAGACAGAAAATATTCCGACTATCCCCAGTCGTGCGATTGCTAGTTTCCGTAAATCCTTTAATATCAGGGGCAATTCTGTCAATGTCGTGCGACCTGTTCAACTTCCCGGTCCTCGTGGACTTCGCCCAACGGGTCCATCAAGGGGAGCTCCTGCACGTCTTCCTGTTGGGCTTTTGTCGAGAGGTGGCCGCAATGTGTTTTCGTCTTCAGTTGTTAAGAGTATATCACCATCCAAAAAATTGCCATCGAAATCTCGCTCACCTAGTCGTTCTCCTGTTTCCAAACCTTTAAAAGATTGGCAGAGAAAGCGTTTGTATAGATCCAGGTCTAGTTCATCCTCAGAATCACGTGGC ] [+] EMBL CD114810 [ CTCCTGCACGTCTTCCTGTTGGGCTTTTGTCGAGAGGTGGCCGCAATGTGTTTTCGTCTTCAGTTGTTAAGAGTATATCACCATCCAAAATATTGCCATCGAAATCTCGCTCACCTAGTCGTTCTCCTGTTTCCAAACCTTTAAAAGATTGGCAGAGAAAGCGTTTGTATAGATCCAGGTCTAGTTCATCCTCAGAATCACGTGGCTCCCCTCATTCTTCATCCTCAAGTAGTTTCAGGACAAAACGCCTTCGGCGTCGGGACTCTCGGTCGCGCTCT ] [+] EMBL CD186700 [ CTGTTGGGCTTTTGTCGAGAGGTGGCCGCAATGTGTTTTCGTCTTCAGTTGTTAAGAGTATATCACCATCCAAAAAATTGCCATCGAAATCTCGCTCACCTAGTCGTTCTCCTGTTTCCAAACCTTTAAAAGATTGGCAGAGAAAGCGTTTGTATAGATCCAGGTCTAGTTCATCCTCAGAATCACGTGGCTCCCCTCATTCTTCATCCTCAAGTAGTTTCAGGACAAAACGCCTTCGGCGTCGGGACTCTCGGTCGCGCTCTGGTTCTCGACATGCACAGCGAAAGACGAATGATGTAAAGGATTCTCAAAAAAGTACACCGCAGTTAGCCACCAGGGGGAATTCCAAAGGTAGACGACGGAGGCGTGGTGGTGCTTCAAACGCCGACTCAAGTACAGACGCAAATACTTCTAATGAAGATGT ] [-] EMBL CD096249 [ CCAAAGGTAGACGACGGAGGCGTGGTGGTGCTTCAAACGCCGACTCAAGTACAGACGCAAATACTTCTAATGAAGATGTAACAGCTGCAAGGGGTCGTGGACGTGGCAATTGGCGTAGTAAACGTGGAAGCATTTCAAAGCATACTCCTCCAAGTGAATCTCGCCTTACACAACGAGCCAGTAGATTTAAAGATCATCTGGTGCAGTCACCTATTGGATCAGGCTCCATTGCACGGACAACCAGTCAGCTGCTTTCGAATTACACTGACGAACGTGATGATTTAGCTGTTGATTTCGGTAGCTGTCAAATCGTTGGTACCATGCAAGAAATAGAAAAACAATACTTGAGACTGACTCGAGCTCCAGATCCTACAGAAGTGCGACCCTTAGCAATTTTGAAGCTTTCTTTGGAGCACGTCAAAGAAAAATGGCGTTCAAATACCGATTACCACTGGGTGTGTGAGCAGTTCAAAAGTATACGTCAAGACTTAACTGTACAAGGTATCGAAGATGATTTTGCAGTATCGGTTTATGAAGCACATGCAGATGTA ] [+] EMBL CD136794 [ AAGTACAGACGCAAATACTCCTAATGAAGATGTAACAGCTGCAAGGGGTCGTGGACGTGGCAATTGGCGTAGTAAACGTGGAAGCATTTCAAAGCATACTCCTTCAAGTGAATCTCGCCTTACACAACGAGCCAGTAGATTTAAAGATCATCTGGTGCAGTCACCTATTGGATCAGGCTCCATTGCACGGACAACCAGTCAGCTGCTTTCGAATTACACTGACGAACGTGATGATTTAGCTGTTGATTTCGGTAGCTGTCAAATCGTTGGTACCATGCAAGAAATAGAAAAACAATACTTGAGACTGACTCGAGCTCCAGATCCTACAGAAGTGCGACCCTTAGCAATTTTGAAGCTTTCTTTGGAGCACGTCAAAGAAAAATGGCGTTCAAATACCGATTACCACTGNGTGTGTGAGCAGTTCAAAAGTATACGTCAAGACTTAACTGTACAAGGTATCGAAGATGATTNTGCAGTATCGGTTTATGAAGCACATGCAGATGTAGCCTTTAG AGCTGGTGATTNTG AGAGTTTCATCAATGTCAAAGTCAGTTGC ] [-] EMBL CD186395 [ AGCTGCTGATTTCGGTAGCTGTCAAATCGTTGGTACCATGCAAGAAATAGAAAAACAATACTTGAGACTGACTCGAGCTCCAGATCCTACAGAAGTGCGACCCTTAGCAATTTTGAAGCTTTCTTTGGAGCACGTCAAAGAAAAATGGCGTTCAAATACCGATTACCACTGGGTGTGTGAGCAGTTCAAAAGTATACGTCAAGACTTAACTGTACAAGGTATCGAAGATGATTTTGCAGTATCGGTTTATGAAGCACATGCAGATGTAGCC TTAGAAGCTGGTGATTTTGAAGAGTTTCATCAATGTCAAAGTCAGTTGCTTCGTCTTCATAAAGAAGGCTTAGGTGTTAGTAGGCTGCTCGAATTTACTGCCTACAGACTTCTTTATTACATCTTCACTCTCGATATTTTAGGTAAGTTAATCGCAATTCGAAAATTGC] [-] EMBL CD186346 [ GTAGCTGTCAAATCGTTGGTACCATGCAAGAAATAGAAAAACAATACTTGAGACTGACTCGAGCTCCAGATCCTACAGAAGTGCGACCCTTAGCAATTTTGAAGCTTTCTTTGGAGCACGTCAAAGAAAAATGGCGTTCAAATACCGATTACCACTGGGTGTGTGAGCAGTTCAAAAGTATACGTCAAGACTTAACTGTACAAGGTATCGAAGATGATTTTGCAGTATCGGTTTATGAAGCACATGCAGATGTAGCC TTAGAAGCTGGTGATTTTGAAGAGTTTCATCAATGTCAAAGTCAGTTGCTTCGTCTTCATAAAGAAGGCTTAGGTGTTAGTAGGCTGCTCGAATTTACTGCCTACAGACTTCTTTA TACATCTTCACTCTCGATATTTTAGGTAAGTTAATCGCAATTCGAAAATTGC] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||