These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10324#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1120 fasta sequence [CGGAGCCATTAATTCGGCACGACGCTTGAGAGCGTCCACCTACTGACTAGAACCGTACGAGGGTTATCGACCAGAGTGAGAACTTGGATGCTGATTTACACTTGATGCTGTAATGCCAAAACTCTATTTAGCCAAATAATTATTCACTCGTTCAAATGAGTGAATTTCGGACCGAAATGCGAGACCTCATTGGTTCGTCCATAAATTATAGTCTTGTTTGAAAATTTTCTAATTGATGACTTCTCAATTCGGCTCTCCTGGGTGGAAGCTGTCAAACCATCATGACACTCTCAAGGTCACTTTGACGTCGCTCAAATGTCCCTCTGAATGTAACTGTGTGCAGTCCATCATCTAATTAAATACACTTAATTTGAGTTTGTTATTTACAACTTCAATGTAGCATGAACACACACCTGGTTGAATACTCATCTAGCGATGAAGAAAAGACTGAAAAACTGGAGCTGCCTACAACACTCCAAGATTTAAATTCCGATTCCTTTCGTTTTTTTGTTCGTGAAGATGATCCTTCGAAGCATGATTTTCGTAGTAGAACTTTTCCTCATGAACCTGGGAGTTGGGCTACTTCCGTTTATATTCCATGTTATCATTTGCATTCTAGAATACTTGAGGCGATCAAAGACCCCGTAATTCAATCAAATCCTGTAATGGCTGATTGTTATACTGTGGATTCTCCTCACATAAGTTTGTCGAAGACATGGCCTATTTATTTCCATTGGATTGAGAATCTCGTTGGTAATCTTCGTTCTGCTGTAAAATCTTTTGGAAGTTCTGGATTGCACTTGATGGTGTAAAAGTTCTTGTAAATGAAGAAACACACGATCATTTTTTACTTTAGTAGCTTCTGAAGAGTCGCGTATAGTACTGATTTCTCTACTCAATTCCTGTGATCCATGTGTCACTGCGTTTAGAGGACCAAAGTTTATGAAATCCCCAATTCATATGACCTTTTGTGGTGTAATGGGATGTTCTAGAAGTATCAACGAAACCCTAACATTTTTCGAGGATTTGAAAAGCATATTTGAGATCTAAAAATATCCATGAGTCCGATTAGGTGCAAAGTGACCAACTTTCAATAAATTATTGGACCTTTAGAAAAGAA] [+] EMBL CD081574 [CGGAGCCATTAATTCGGCACGACGCTTGAGAGCGTCCACCTACTGACTAGAACCGTACGAGGGTTATCGACCAGAGTGAGAACTTGGATGCTGATTTACACTTGATGCTGTAATGCCAAAACTCTATTTAGCCAAATAATTATTCACTCGTTCAAATGAGTGAATTTCGGACCGAAATGCGAGACCTCATTGGTTCGTCCATAAATTATAGTCTTGTTTGAAAATTTTCTAATTGATGACTTCTCAATTCGGCTCTCCTGGGTGGAAGCTGTCAAACCATCATGACACTCTCAAGGTCACTTTGACGTCGCTCAAATGTCCCTCTGAATGTAACTGTGTGCAGTCCATCATCTAATTAAATACACTTAATTTGAGTTTGTTATTTACAACTTCAATGTAGCATGAACACACACCTGGTTGAATACTCATCTAGCGATGAAGAAAAGACTGAAAAACTGGAGCTGCCTACAACACTCCAAGATTTAAATTCCGATTCCTTTCGTTTTTTTGTTCGTGAAGATGATCCTTCGAAGCATGATTTTCGTAGTAGAACTTTTCCTCATGAACCTGGGAGTTGGGCTACTTCCGTTTATATTCCATGTTATCATTTGCATTCTAGAATACTTGAGGCGATCAAAGACCCCGTAATTCAATCAAATCCTGTAATGGCTGATTGTTATACTGTGGATTCTCCTCACATAAGTTTGTCGAAGACATGGCCTATTTATTTCCATTGGATTGAGAATCTCGTTGGTAATCTTCGTTCTGCTGTAAAATCTTTTGGAAGTTCTGGATTGCACTTGATGGTGTAAAAGTTCTTGTAAATGAAGAAACACACGATCATTTTTTACTTTAGTAGCTTCTGAAGAGTCGCGTATAGTACTGATTTCTCTACTCAATTCCTGTGATCCATGTGTCACTGCGTTTAGAGGACCAAAGTTTATGAAATCCCCAATTCATATGACCTTTTGTGGTGTAATGGGATGTTCTAGAAGTATCAACGAAACCCTAACATTTTTCGAGGATTTGAAAAGCATATTTGAGATCTAAAAATATCCATGAGTCCGATTAGGTGCAAAGTGACCAACTTTCAATAAATTATTGGACCTTTAGAAAAGAA] consensusID : consensus_10324#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 927 fasta sequence [TTTATGTATTTATGGGTCGCATTGCTTATTTTCTATTCCCTGTATTTTTGTCTCTATTATTTATCATTCATTTGCCATCTTTTTTAGTGAATGTAACTGTGTGCAGTCCATCATCTAATTAAATACACTTAATTTGAGTTTGTTATTTACAACTTCAATGTAGCATGAACACACACCTGGTTGAATACTCATCTAGCGATGAAGAAAAGACTGAAAAACTGGAGCTGCCTACAACACTCCAAGATTTAAATTCCGATTCCTTTCGTTTTTTTGTTCGTGAAGATGATCCTTCGAAGCATGATTTTCGTAGTAGAACTTTTCCTCATGAACCTGGGAGTTGGGCTACTTCCGTTTATATTCCATGTTATCATTTGCATTCTAGAATACTTGAGGCGATCAAAGACCCCGTAATTCAATCAAATCCTGTAATGGCTGATTGTTATACTGTGGATTCTCCTCACATAAGTTTGTCGAAGACATGGCCTATTTATTTCCATTGGATTGAGAATCTCGTTGGTAATCTTCGTTCTGCTGTAAAATCTTTTGGAAAGTTTTGGATTGCACTTGATGGTGTAGAAGTTCTTGTAAATGAAGAAAACACACGATCATTTTTTACTTTAGTAGCTTTTGAAGAGTCGCGTATAGTACTGATTTCTTTACTCAATTTTGTTGATCCATGTGTCACTGCGTTTAGAGGACCAAAGTATTATGAAAATCCCCAATTTCATATGAGCTTTTTGTGGTGTAATGGGAATGTTTGTAAGAAGTATTCAACAGAAACACTAAACAATTTTTCGATGGATTTGCAAAAAGCAATATTTGTAGAATTTAAAAAAATATTCCATGAAGTTACAGATATAGTGTGCAAAAGTGGAAGCAAACATTTCGACATAAATATATTGTGATCTTTTATGTAAATAGATGGAC] [+] EMBL CD078789 [TTTATGTATTTATGGGTCGCATTGCTTATTTTCTATTCCCTGTATTTTTGTCTCTATTATTTATCATTCATTTGCCATCTTTTTTAGTGAATGTAACTGTGTGCAGTCCATCATCTAATTAAATACACTTAATTTGAGTTTGTTATTTACAACTTCAATGTAGCATGAACACACACCTGGTTGAATACTCATCTAGCGATGAAGAAAAGACTGAAAAACTGGAGCTGCCTACAACACTCCAAGATTTAAATTCCGATTCCTTTCGTTTTTTTGTTCGTGAAGATGATCCTTCGAAGCATGATTTTCGTAGTAGAACTTTTCCTCATGAACCTGGGAGTTGGGCTACTTCCGTTTATATTCCATGTTATCATTTGCATTCTAGAATACTTGAGGCGATCAAAGACCCCGTAATTCAATCAAATCCTGTAATGGCTGATTGTTATACTGTGGATTCTCCTCACATAAGTTTGTCGAAGACATGGCCTATTTATTTCCATTGGATTGAGAATCTCGTTGGTAATCTTCGTTCTGCTGTAAAATCTTTTGGAAAGTTCTGGATTGCACTTGATGGTGTAGAAGTTCTTGNTAATGAAG AAACACACG ] [-] EMBL CD075400 [ AGGCGATCAAAGACCCCGTAATTCAATCAAATCCTGTAATGGCTGATTGTTATACTGTGGATTCTCCTCACATAAGTTTGTCGAAGACATGGCCTATTTATTTCCATTGGATTGAGAATCTCGTTGGTAATCTTCGTTCTGCTGTAAAATCTTTTGGAAAGTTTTGGATTGCACTTGATGGTGTAGAAGTTCTTGTAAATGAAGAAAACACCCGATCATTTTTTACTTTAGTAGCTTTTGAAGAGTCGCGTATAGTACTGATTTCTCTACTCAATTCTGTTGATCCATGTGTCACTGCGTTTAGAGGACCAAAGTATTATGAAAATCCCAAATTTCATATGAGCTTTTTGTGGTGTAATGGGAATGTTCGTAAGAAGTATTCAACAGAAACACTAAACAATTTTTCGATGGATTTGCAAAAAGCAATATTTGTAGAATTTAAAAAAATATTCCATGAAGTTACAGATATAGTGTGCAAAAGTGGAAGCAAACATTTCGACATAAATATATTGTGATCTTTTATGTAAATAGATGGAC] [-] EMBL CD075884 [ CCGTAATTCAATCAAATCCTGTAATGGCTGATTGTTATACTGTGGATTCTCCTCACATAAGTTTGTCGAAGACATGGCCTATTTATTTCCATTGGATTGAGAATCTCGTTGGTAATTTTCGTTCTGCTGTAAAATCTTTTGGAAAGTTTTGGATTGCACTTGATGGTGTAGAAGTTTTTGTAAATGAAGAAAACACACGATCATTTTTTACTTTAGTAGCTTTTGAAGAGTCGCGTATAGTACTGATTTCTTTACTCAATTTTGTTGATCCATGTGTCACTGCGTTTAGAGGACCAAAGTATTATGAAAATCCCCAATTTCATATGAGCTTTTTGTGGTGTAATGGGAATGTTTGTAAGAAGTATTCAACAGAAACCCTAAACAATTTTTCGATGGATTTGCAAAAAGCAATATTTGTAGAATTTAAAAAAATATTCCATGAAGTTACAGATATAGTGTGCAAAAGTGGAAGCAAACATTTCGACATAAATATATTGTGATCTTTTATGTAAATAGATGGAC] [-] EMBL CD073250 [ tTCCTCACATAAGTTTGTTGAAGACATGGCCTATTTATTTCCATTGGATTGAGAATTTCGTTGGTAATTTTCGTTTTGCTGTAAAATTTTTTGGAAAGTTTTGGATTGCACTTGATGGTGTAGAAGTTTTTGTAAATGAAGAAAACACACGATCATTTTTTACTTTAGTAGGTTTTGAAGAGTTGGGTATAGTACTGATTTTTTTACTCAATTTTGTTGATCCATGTGTCACTGGGTTTAGAGGACCAAAGTATTATGAAAATCCCCAATTTCATATGAGCTTTTTGTGGTGTAATGGGAATGTTTGTAAGAAGTATTCAACAGAAACACTAAACAATTTTTTGATGGATTTGCAAAAAGCAATATTTGTAGAATTTAAAAAAATATTCCATGAAGTTACAGATATAGTGTGCAAAAGTGGAAGCAAACATTTTGACATAAATATATTGTGATTTTTTATGTAAATAGATGGAC] consensusID : consensus_10324#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 852 fasta sequence [CGAGGACTTGAGTAGTAAAGTG-AATGTAACTGTGTGCTTTCCATCATCTAATTAACTACACTTAATTTGAGTTTGTTATTTACAA-CTTCAATGTAGCATGAACACACACCTGGTTGAATACTCATCTAGCGATGAAGAAAAGACTGAAAAACTGGAGCTGCCTACAACACTCCAAGATTTAAATTCCGATTCCTTTCGTTTTTTTGTTCGTGAAGATGATCCTTCGAAGCATGATTTTCGTAGTAGAACTTTTCCTCATGAACCTGGGAGTTGGGCTACTTCCGTTTATATTCCATGTTATCATTTGCATTCTAGAATACTTGAGGCGATCAAAGACCCCGTAATTCAATCAAATCCTGTAATGGCTGATTGTTATACTGTGGATTCTCCTCACATAAGTTTGTCGAAGACATGGCCTATTTATTTCCATTGGATTGAGAATCTCGTTGGTAATCTTCGTTCTGCTGTAAAATCTTTTGGAAAGTTCTGGATTGCACTTGATGGTGTAGAAGTTCTTGTAAATGAAGAAAACACACGATCATTTTTTACTTTAGTAGCTTCTGAAGAGTCGCGTATAGTACTGATTTCTCTACTCAATTCTGTTGATCCATGTGTCACTGCGTTTAGAGGACCAAAGTATATGAAAATCCCAAATTCATATGAGCTTTNTGTGGTGTAATGGGAAAATGTCGTAGAAGTATTCAACAGAAACACTAAACAATTTTTCGATGGATTTTGCAAAAAGCATATTTGTAGAATCTAAAAATATTNCATGAAAGTACAGATATAGTGTGCAAAAGTGAAAGCAACATTNCGACATAATTTATTGGGATCTTTATGTAAATAGATGTA] [+] EMBL CD082279 [CGAGGACTTGAGTAGTAAAGTG AATGTAACTGTGTGCTTTCCATCATCTAATTAACTACACTTAATTTGAGTTTGTTATTTACAA CTTCAATGTAGCATGAACACACACCTGGTTGAATACTCATCTAGCGATGAAGAAAAGACTGAAAAACTGGAGCTGCCTACAACACTCCAAGATTTAAATTCCGATTCCTTTCGTTTTTTTGTTCGTGAAGATGATCCTTCGAAGCATGATTTTCGTAGTAGAACTTTTCCTCATGAACCTGGGAGTTGGGCTACTTCCGTTTATATTCCATGTTATCATTTGCATTCTAGAATACTTGAGGCGATCAAAGACCCCGTAATTCAATCAAATCCTGTAATGGCTGATTGTTATACTGTGGATTCTCCTCACATAAGTTTGTCGAAGACATGGCCTATTTATTTCCATTGGATTGAGAATCTCGTTGGTAATCTTCGTTCTGCTGTAAAATCTTTTGGAAAGTTCTGGATTGCACTTGATGGTGTAGAAGTTCTTGTAAATGAAGAAAACACACGATCATTTTTTACTTTAGTAGCTTCTGAAGAGTCGCGTATAGTACTGATTTCTCTACTCAATTCTGTTGATCCATGTGTCACTGCGTTTAGAGGACCAAAGTATATGAAAATCCCAAATTCATATGAGCTTTNTGTGGTGTAATGGGAAAATGTCGTAGAAGTATTCAACAGAAACACTAAACAATTTTTCGATGGATTTTGCAAAAAGCATATTTGTAGAATCTAAAAATATTNCATGAAAGTACAGATATAGTGTGCAAAAGTGAAAGCAACATTNCGACATAATTTATTGGGATCTTTATGTAAATAGATGTA] [+] EMBL CD064626 [ taTTGAGT GT CTGTGAAATGTAACTGTGTGCAGTCCATCATCTAATTAAATACACTTAATTTGAGTTTGTTATTTACAAGCTTCAATGTAGCATGAACACACACCTGGTTGAATACTCATCTAGCGATGAAGAAAAGACTGAAAAACTGGAGCTGCCTACAACACTCCAAGATTTAAATTCCGATTCCTTTCGTTTTTTTGTTCGTGAAGATGATCCTTCGAAGCATGATTTTCGTAGTAGAACTTTTCCTCATGAACCTGGGAGTTGGGCTACTTCCGTTTATATTCCATGTTATCATTTGCATTCTAGAATACTTGAGGCGATCAAAGACCCCGTAATTCAATCAAATCCTGTAATGGCTGATTGTTATACTG ] [-] EMBL CD156046 [ CACCTGGTTGAATACTCATCTAGCGATGAAGAAAAGACTGAAAAACTGGAGCTGCCTACAACACTCCAAGATTTAAATTCCGATTCCTTTCGTTTTTTTGTTCGTGAAGATGATCCTTCGAAGCATGATTTTCGTAGTAGAACTTTTCCTCATGAACCTGGGAGTTGGGCTACTTCCGTTTATATTCCATGTTATCATTTGCATTCTAGAATACTTGAGGCGATCAAAGACCCCGTAATTCAATCAAATCCTGTAATGGCTGATTGTTATACTGTGGATTCTCCTCACATAAGTTTGTCGAAGACATGGCCTATTTATTTCCATTGGATTGAGAATCTCGTTGGTAATCTTCGTTCTGCTGTAAAATCTTTTGGAAAGTTCTGGATTGCA ] [+] EMBL CD063393 [ TTCTTAGTAAAACTTTTCCTCATGAACCTGGGAGTTGGGCTACTTCCGTTTATATTCCATGTTATCATTTGCATTCTAAAATACTTGAGGCGATCAAAGACCCCGTAATTCAATCAAATCCTGTAATGGCTGATTGTTATACTGTGGATTCTCCTCACATAAG ] consensusID : consensus_10324#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 787 fasta sequence [TCGTAGTAGAACTTTTCCTCATGAACCTGGGAGTTGGGCTACTTCCGTTTATATTCCATGTAATCATAACAACATCTTGCATTGTACCAAGGTTATCATTTGCATTCTAGAATACTTGAGGCGATCAAAGACCCCGTAATTCAATCAAATCCTGTAATGGCTGATTGTTATACTGTGGATTCTCCTCACATAAGTTTGTCGAAGACATGGCCTATTTATTTCCATTGGATTGAGAATCTCGTTGGTAATCTTCGTTCTGCTGTAAAATCTTTTGGAAAGTAAGAATAATTGATACATGCTTAAGCAATTGTAGGTTCTGGATTGCACTTGATGGTGTAGAAGTTCTTGTAAATGAAGAAAACACACGGTACCCACCTCCTACCGTTTATAATGTGTAGATCATTTTTTACTTTAGTAGCTTCTGAAGAGTCGCGTATAGTACTGATTTCTCTACTCAATTCTGTTGATCCATGTGTCACTGCGTTTAGAGGACCAAAGTATTATGAAGTGAGACAGTCAATTTCCCTATTATTCCTCAGAATCCCAAATTTCATATGAGCTTTTTGTGGTGTAATGGGAATGTTCGTAAGAAGTATTCAACAGAAACACTAAACAATTTTTCGGTAAGACAACATTTTTCTGTGATTTATTTATGCAGATGGATTTGCAAAAAGCAATATTTGTAGAATCTAAAAAAATATTCCATGAAGTTACAGATATAGTGTGCAAAAGTGGAAGCAAACATTTCGACAT-NATATATTGTGATCTTTTATGTAAATAGATGTAC] [-] EMBL CD063481 [TCGTAGTAGAACTTTTCCTCATGAACCTGGGAGTTGGGCTACTTCCGTTTATATTCCATGTAATCATAACAACATCTTGCATTGTACCAAGGTTATCATTTGCATTCTAGAATACTTGAGGCGATCAAAGACCCCGTAATTCAATCAAATCCTGTAATGGCTGATTGTTATACTGTGGATTCTCCTCAC ] [+] EMBL CD082008 [ AGACCCCGTAATTCAATCAAATCCTGTAATGGCTGATTGTTATACTGTGGATTCTCCTCACATAAGTTTGTCGAAGACATGGCCTATTTATTTCCATTGGATTGAGAATCTCGTTGGTAATCTTCGTTCTGCTGTAAAATCTTTTGGAAAGTAAGAATAATTGATACATGCTTAAGCAATTGTAGGTTCTGGATTGCACTTGATGGTGTAGAAGTTCTTGTAAATGAAGAAAACACACGGTACCCACCTCCTACCGTTTATAATGTGTAGATCATTTTTTACTTTAGTAGCTTCTGAAGAGTCGCGTATAGTACTGATTTCTCTACTCAATTCTGTTGATCCATGTGTCACTGCGTTTAGAGGACCAAAGTATTATGAAGTGAGACAGTCAATTTCCCTATTATTCCTCAGAATCCCAAATTTCATATGAGCTTTTTGTGGTGTAATGGGAATGTTCGTAAGAAGTATTCAACAGAAACACTAAACAATTTTTCGGTAAGACAACATTTTTCTGTGATTTATTTATGCAGATGGATTTGCAAAAAGCAATATTTGTAGAATCTAAAAAAATATTCCATGAAGTTACAGATATAGTGTGCAAAAGTGGAAGCAAACATTTCGACAT NATATATTGTGATCTTTTATGTAAATAGATGTA ] [-] EMBL CD075623 [ TTTGTCGAAGACATGGCCTATTTATTTCCATTGGATTGAGAATCTCGTTGGTAATCTTCGTTCTGCTGTAAAATCTTTTGGAAAGTAAGAATAATTGATACATGCTTAAGCAATTGTAGGTTCTGGATTGCACTTGATGGTGTAGAAGTTCTTGTAAATGAAGAAAACACACGGTACCCACCTCCTACCGTTTATAATGTGTAGATCATTTTTTACTTTAGTAGCTTCTGAAGAGTCGCGTATAGTACTGATTTCTCTACTCAATTCTGTTGATCCATGTGTCACTGCGTTTAGAGGACCAAAGTATTATGAAGTGAGACAGTCAATTTCCCTATTATTCCTCAGAATCCCAAATTTCATATGAGCTTTTTGTGGTGTAATGGGAATGTTCGTAAGAAGTATTCAACAGAAACACTAAACAATTTTTCGGTAAGACAACATTTTTCTGTGATTTATTTATGCAGATGGATTTGCAAAAAGCAATATTTGTAGAATCTAAAAAAATATTCCATGAAGTTACAGATATAGTGTGCAAAAGTGGAAGCAAACATTTCGACATAAATATATTGTGATCTTTTATGTAAATAGATGTAC] consensusID : consensus_10324#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 519 fasta sequence [GAGGCGCTAGAGTGACCTTGAGAGCGTCCACCTACTGACTAGAACCGTACGAGGGTTATCGACCAGAGTGAGAACTTGGATGCTGATTTACACTTGATGAATACTTGAGGCGATCAAAGACCCCGTAATTCAATCAAATCCTGTAATGGCTGATTGTTATACTGTGGATTCTCCTCACATAAGTTTGTCGAAGACATGGCCTATTTATTTCCATTGGATTGAGAATCTCGTTGGTAATCTTCGTTCTGCTGTAAAATCTTTTGGAAAGTTCTGGATTGCACTTGATGGTGTAGAAGTTCTTGTAAATGAAGAAAACACACGATCATTTTTTACTTTAGTAGCTTCTGAAGAGTCGCGTATAGTACTGATTTCTCTACTCAATTCTGTTGATCCATGTGTCACTGCGTTTAGAGGACCAAAGTATTATGAAAATCCCAAATTTCATATGAGCTTTTTGTGGTGTAATGGGAATGTTCGTAAGAAGTATCAACAGAAACACTAAACAATTTTTCGATGGAT] [+] EMBL CD077514 [GAGGCGCTAGAGTGACCTTGAGAGCGTCCACCTACTGACTAGAACCGTACGAGGGTTATCGACCAGAGTGAGAACTTGGATGCTGATTTACACTTGATGAATACTTGAGGCGATCAAAGACCCCGTAATTCAATCAAATCCTGTAATGGCTGATTGTTATACTGTGGATTCTCCTCACATAAGTTTGTCGAAGACATGGCCTATTTATTTCCATTGGATTGAGAATCTCGTTGGTAATCTTCGTTCTGCTGT ] [+] EMBL CD084167 [ CGCTAGAGTGACCTTGAGAGCGTCCACCTACTGACTAGAACCGTACGAGGGTTATCGACCAGAGTGAGAACTTGGATGCTGATTTACACTTGATGAATACTTGAGGCGATCAAAGACCCCGTAATTCAATCAAATCCTGTAATGGCTGATTGTTATACTGTGGATTCTCCTCACATAAGTTTGTCGAAGACATGGCCTATTTATTTCCATTGGATTGAGAATCTCGTTGGTAATCTTCGTTCTGCTGTAAAATCTTTTGGAAAGTTCTGGATTGCACTTGATGGTGTAGAAGTTCTTGTAAATGAAGAAAACACACGATCATTTTTTACTTTAGTAGCTTCTGAAGAGTCGCGTATAGTACTGATTTCTCTACTCAATTCTGTTGATCCATGTGTCACTGCGTTTAGAGGACCAAAGTATTATGAAAATCCCAAATTTCATATGAGCTTTTTGTGGTGTAATGGGAATGTTCGTAAGAAGTATCAACAGAAACACTAAACAATTTTTCGATGGAT] consensusID : consensus_10324#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 138 fasta sequence [TCGTAGTAGAACTTTTCCTCATGAACCTGGGAGTTGGGCTACTTCCGTTTATATTCCATAATACTTGAGGCGATCAAAGACCCCGTAATTCAATCAAATCCTGTAATGGCTGATTGTTATACTGTGGATTCTCCTCAC] [-] EMBL CD063531 [TCGTAGTAGAACTTTTCCTCATGAACCTGGGAGTTGGGCTACTTCCGTTTATATTCCATAATACTTGAGGCGATCAAAGACCCCGTAATTCAATCAAATCCTGTAATGGCTGATTGTTATACTGTGGATTCTCCTCAC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10324#0 CGGAGCCATTAATTCGGCACGACGCTTGAGAGCGTCCACCTACTGACTAGAACCGTACGA 60 consensus_10324#5 ------------------------------------------------------------ consensus_10324#2 ------------------------------------------------------------ consensus_10324#1 ------------------------------------------------------------ consensus_10324#3 ------------------------------------------------------------ consensus_10324#4 ------------------------------------------------------------ consensus_10324#0 GGGTTATCGACCAGAGTGAGAACTTGGATGCTGATTTACACTTGATGCTGTAATGCCAAA 120 consensus_10324#5 ------------------------------------------------------------ consensus_10324#2 ------------------------------------------------------------ consensus_10324#1 ------------------------------------------------------------ consensus_10324#3 ------------------------------------------------------------ consensus_10324#4 ------------------------------------------------------------ consensus_10324#0 ACTCTATTTAGCCAAATAATTATTCACTCGTTCAAATGAGTGAATTTCGGACCGAAATGC 180 consensus_10324#5 ------------------------------------------------------------ consensus_10324#2 ------------------------------------------------------------ consensus_10324#1 ------------------------------------------------------------ consensus_10324#3 ------------------------------------------------------------ consensus_10324#4 ------------------------------------------------------------ consensus_10324#0 GAGACCTCATTGGTTCGTCCATAAATTATAGTCTTGTTTGAAAATTTTCTAATTGATGAC 240 consensus_10324#5 ------------------------------------------------------------ consensus_10324#2 ------------------------------------------------------------ consensus_10324#1 ----------------------------------------------------TTTATGTA 8 consensus_10324#3 ------------------------------------------------------------ consensus_10324#4 ------------------------------------------------------------ consensus_10324#0 TTCTCAATTCGGCTCTCCTGGGTGGAAGCTGTCAAACCATCATGACACTCTCAAGGTCAC 300 consensus_10324#5 ------------------------------------------------------------ consensus_10324#2 ------------------------------------------------------------ consensus_10324#1 TTTATGGGTCGCATTGCTTATTTTCTATTCCCTGTATTTTTGT----CTCTATTATTTAT 64 consensus_10324#3 ------------------------------------------------------------ consensus_10324#4 ------------------------------------------------------------ consensus_10324#0 TTTGACGTCGCTCAAATGTCCCTCTGAATGTAACTGTGTGCAGTCCATCATCTAATTAAA 360 consensus_10324#5 ------------------------------------------------------------ consensus_10324#2 --CGAGG--ACTTGAGTAGTAAAGTGAATGTAACTGTGTGCTTTCCATCATCTAATTAAC 56 consensus_10324#1 CATTCATTTGC-CATCTTTTTTAGTGAATGTAACTGTGTGCAGTCCATCATCTAATTAAA 123 consensus_10324#3 ------------------------------------------------------------ consensus_10324#4 ------------------------------------------------------------ consensus_10324#0 TACACTTAATTTGAGTTTGTTATTTACAACTTCAATGTAGCATGAACACACACCTGGTTG 420 consensus_10324#5 ------------------------------------------------------------ consensus_10324#2 TACACTTAATTTGAGTTTGTTATTTACAACTTCAATGTAGCATGAACACACACCTGGTTG 116 consensus_10324#1 TACACTTAATTTGAGTTTGTTATTTACAACTTCAATGTAGCATGAACACACACCTGGTTG 183 consensus_10324#3 ------------------------------------------------------------ consensus_10324#4 ------------------------------------------------------------ consensus_10324#0 AATACTCATCTAGCGATGAAGAAAAGACTGAAAAACTGGAGCTGCCTACAACACTCCAAG 480 consensus_10324#5 ------------------------------------------------------------ consensus_10324#2 AATACTCATCTAGCGATGAAGAAAAGACTGAAAAACTGGAGCTGCCTACAACACTCCAAG 176 consensus_10324#1 AATACTCATCTAGCGATGAAGAAAAGACTGAAAAACTGGAGCTGCCTACAACACTCCAAG 243 consensus_10324#3 ------------------------------------------------------------ consensus_10324#4 ------------------------------------------------------------ consensus_10324#0 ATTTAAATTCCGATTCCTTTCGTTTTTTTGTTCGTGAAGATGATCCTTCGAAGCATGATT 540 consensus_10324#5 ------------------------------------------------------------ consensus_10324#2 ATTTAAATTCCGATTCCTTTCGTTTTTTTGTTCGTGAAGATGATCCTTCGAAGCATGATT 236 consensus_10324#1 ATTTAAATTCCGATTCCTTTCGTTTTTTTGTTCGTGAAGATGATCCTTCGAAGCATGATT 303 consensus_10324#3 -------------------TCGTAGTAGAACTTTTCCTCATGAACCTGGGAGTTGGGCTA 41 consensus_10324#4 ----------------------------GAGGCGCTAGAGTGACCTTGAGAGC-GTCCAC 31 consensus_10324#0 TTCGTAGTAGAACTTTTCCTCATGAACCTGGGAGTTGGGCTACTTCCGTTTATATTCCAT 600 consensus_10324#5 -TCGTAGTAGAACTTTTCCTCATGAACCTGGGAGTTGGGCTACTTCCGTTTATATTCCAT 59 consensus_10324#2 TTCGTAGTAGAACTTTTCCTCATGAACCTGGGAGTTGGGCTACTTCCGTTTATATTCCAT 296 consensus_10324#1 TTCGTAGTAGAACTTTTCCTCATGAACCTGGGAGTTGGGCTACTTCCGTTTATATTCCAT 363 consensus_10324#3 CTTCCGTTTATATT---CCATGTAATCATAACAAC------ATCTTGCATTGTACCA-AG 91 consensus_10324#4 CTACTGACTAGAA----CCGTACGAGGGTTATCG-------ACCAGAGTGAGAACTT-GG 79 * * ** * * * * consensus_10324#0 GTTATCATTTGCATTCTA-GAATACTTGAGGCGATCAAAGACCCCGTAATTCAATCAAAT 659 consensus_10324#5 --------------------AATACTTGAGGCGATCAAAGACCCCGTAATTCAATCAAAT 99 consensus_10324#2 GTTATCATTTGCATTCTA-GAATACTTGAGGCGATCAAAGACCCCGTAATTCAATCAAAT 355 consensus_10324#1 GTTATCATTTGCATTCTA-GAATACTTGAGGCGATCAAAGACCCCGTAATTCAATCAAAT 422 consensus_10324#3 GTTATCATTTGCATTCTA-GAATACTTGAGGCGATCAAAGACCCCGTAATTCAATCAAAT 150 consensus_10324#4 ATGCTGATTTACACTTGATGAATACTTGAGGCGATCAAAGACCCCGTAATTCAATCAAAT 139 **************************************** consensus_10324#0 CCTGTAATGGCTGATTGTTATACTGTGGATTCTCCTCACATAAGTTTGTCGAAGACATGG 719 consensus_10324#5 CCTGTAATGGCTGATTGTTATACTGTGGATTCTCCTCAC--------------------- 138 consensus_10324#2 CCTGTAATGGCTGATTGTTATACTGTGGATTCTCCTCACATAAGTTTGTCGAAGACATGG 415 consensus_10324#1 CCTGTAATGGCTGATTGTTATACTGTGGATTCTCCTCACATAAGTTTGTCGAAGACATGG 482 consensus_10324#3 CCTGTAATGGCTGATTGTTATACTGTGGATTCTCCTCACATAAGTTTGTCGAAGACATGG 210 consensus_10324#4 CCTGTAATGGCTGATTGTTATACTGTGGATTCTCCTCACATAAGTTTGTCGAAGACATGG 199 *************************************** consensus_10324#0 CCTATTTATTTCCATTGGATTGAGAATCTCGTTGGTAATCTTCGTTCTGCTGTAAAATCT 779 consensus_10324#5 ------------------------------------------------------------ consensus_10324#2 CCTATTTATTTCCATTGGATTGAGAATCTCGTTGGTAATCTTCGTTCTGCTGTAAAATCT 475 consensus_10324#1 CCTATTTATTTCCATTGGATTGAGAATCTCGTTGGTAATCTTCGTTCTGCTGTAAAATCT 542 consensus_10324#3 CCTATTTATTTCCATTGGATTGAGAATCTCGTTGGTAATCTTCGTTCTGCTGTAAAATCT 270 consensus_10324#4 CCTATTTATTTCCATTGGATTGAGAATCTCGTTGGTAATCTTCGTTCTGCTGTAAAATCT 259 consensus_10324#0 TTTGGAA-GT-----------------------------------TCTGGATTGCACTTG 803 consensus_10324#5 ------------------------------------------------------------ consensus_10324#2 TTTGGAAAGT-----------------------------------TCTGGATTGCACTTG 500 consensus_10324#1 TTTGGAAAGT-----------------------------------TTTGGATTGCACTTG 567 consensus_10324#3 TTTGGAAAGTAAGAATAATTGATACATGCTTAAGCAATTGTAGGTTCTGGATTGCACTTG 330 consensus_10324#4 TTTGGAAAGT-----------------------------------TCTGGATTGCACTTG 284 consensus_10324#0 ATGGTGTAAAAGTTCTTGTAAATGAAGAAA-CACACG----------------------- 839 consensus_10324#5 ------------------------------------------------------------ consensus_10324#2 ATGGTGTAGAAGTTCTTGTAAATGAAGAAAACACACG----------------------- 537 consensus_10324#1 ATGGTGTAGAAGTTCTTGTAAATGAAGAAAACACACG----------------------- 604 consensus_10324#3 ATGGTGTAGAAGTTCTTGTAAATGAAGAAAACACACGGTACCCACCTCCTACCGTTTATA 390 consensus_10324#4 ATGGTGTAGAAGTTCTTGTAAATGAAGAAAACACACG----------------------- 321 consensus_10324#0 --------ATCATTTTTTACTTTAGTAGCTTCTGAAGAGTCGCGTATAGTACTGATTTCT 891 consensus_10324#5 ------------------------------------------------------------ consensus_10324#2 --------ATCATTTTTTACTTTAGTAGCTTCTGAAGAGTCGCGTATAGTACTGATTTCT 589 consensus_10324#1 --------ATCATTTTTTACTTTAGTAGCTTTTGAAGAGTCGCGTATAGTACTGATTTCT 656 consensus_10324#3 ATGTGTAGATCATTTTTTACTTTAGTAGCTTCTGAAGAGTCGCGTATAGTACTGATTTCT 450 consensus_10324#4 --------ATCATTTTTTACTTTAGTAGCTTCTGAAGAGTCGCGTATAGTACTGATTTCT 373 consensus_10324#0 CTACTCAATTCCTGTGATCCATGTGTCACTGCGTTTAGAGGACCAAAGT-TTATGAA--- 947 consensus_10324#5 ------------------------------------------------------------ consensus_10324#2 CTACTCAATTCTGTTGATCCATGTGTCACTGCGTTTAGAGGACCAAAGT-ATATGAA--- 645 consensus_10324#1 TTACTCAATTTTGTTGATCCATGTGTCACTGCGTTTAGAGGACCAAAGTATTATGAA--- 713 consensus_10324#3 CTACTCAATTCTGTTGATCCATGTGTCACTGCGTTTAGAGGACCAAAGTATTATGAAGTG 510 consensus_10324#4 CTACTCAATTCTGTTGATCCATGTGTCACTGCGTTTAGAGGACCAAAGTATTATGAA--- 430 consensus_10324#0 -----------------------------A-TCCCCAATT-CATATGA-CCTTTTGTGGT 975 consensus_10324#5 ------------------------------------------------------------ consensus_10324#2 -----------------------------AATCCCAAATT-CATATGAGCTTTNTGTGGT 675 consensus_10324#1 -----------------------------AATCCCCAATTTCATATGAGCTTTTTGTGGT 744 consensus_10324#3 AGACAGTCAATTTCCCTATTATTCCTCAGAATCCCAAATTTCATATGAGCTTTTTGTGGT 570 consensus_10324#4 -----------------------------AATCCCAAATTTCATATGAGCTTTTTGTGGT 461 consensus_10324#0 GTAATGGGA---TGTTCTAGAAGTAT-CAAC-GAAACCCTAAC--ATTTTTCGA-GGAT- 1026 consensus_10324#5 ------------------------------------------------------------ consensus_10324#2 GTAATGGGAAAATGTCGTAGAAGTATTCAACAGAAACACTAAACAATTTTTCGATGGAT- 734 consensus_10324#1 GTAATGGGAATGTTTGTAAGAAGTATTCAACAGAAACACTAAACAATTTTTCGATGGAT- 803 consensus_10324#3 GTAATGGGAATGTTCGTAAGAAGTATTCAACAGAAACACTAAACAATTTTTCGGTAAGAC 630 consensus_10324#4 GTAATGGGAATGTTCGTAAGAAGTAT-CAACAGAAACACTAAACAATTTTTCGATGGAT- 519 consensus_10324#0 ----------------------------------TT---GAAAAGCATATTTG--AGATC 1047 consensus_10324#5 ------------------------------------------------------------ consensus_10324#2 ----------------------------------TTTGCAAAAAGCATATTTGTAGAATC 760 consensus_10324#1 ----------------------------------TTGCAAAAAGCAATATTTGTAGAATT 829 consensus_10324#3 AACATTTTTCTGTGATTTATTTATGCAGATGGATTTGCAAAAAGCAATATTTGTAGAATC 690 consensus_10324#4 ------------------------------------------------------------ consensus_10324#0 TAAAAA--TAT-CCATGA--GTCCGATTAG---GTGCAAA---GTGACCAA-CTTTCA-- 1093 consensus_10324#5 ------------------------------------------------------------ consensus_10324#2 TAAAAA--TATTNCATGAAAGTACAGATATAGTGTGCAAAAGTGAAAGCAA-CATTNCGA 817 consensus_10324#1 TAAAAAAATATTCCATGAAGTTACAGATATAGTGTGCAAAAGTGGAAGCAAACATTTCGA 889 consensus_10324#3 TAAAAAAATATTCCATGAAGTTACAGATATAGTGTGCAAAAGTGGAAGCAAACATTTCGA 750 consensus_10324#4 ------------------------------------------------------------ consensus_10324#0 -ATAAAT-TATTGG-ACCTTT-AGAAAAGAA------- 1120 consensus_10324#5 -------------------------------------- consensus_10324#2 CATAATT-TATTGGGATCTTT-ATGTAAATAGATGTA- 852 consensus_10324#1 CATAAATATATTGTGATCTTTTATGTAAATAGATGGAC 927 consensus_10324#3 CATNATA-TATTGTGATCTTTTATGTAAATAGATGTAC 787 consensus_10324#4 -------------------------------------- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||