These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10336#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 407 fasta sequence [ACCTGATCGCTGGAATGCTTTAGGATTTGCAGATCGCTGATGAGAAACTGTGGTGAATGAGTACACAGTCAGGGACAACCAAATGTATTTAAACACAAAATTACAGAATCTCTTAGTAAAATCTGAGAACCATACAACAAATATTTAATTTGCAAAATATCAATCAGATGTCTCAAACTTGACCGTTTCTTTTGCAAATATTAGTCAATAATATCAGACTTCATTGTTCTTTCGTTTCTATACTAATCATTCTTTGTTGTTGTTGTTTTCTTTTCTTTCATCTTCTTAACAATCTGCTTCCAAACATTTCACTTCCGATTGATGAAACATACTACTACTTATATCTATCACCATCAGTAACACATATCACAAAACTACCACC-CCCCCCAAAAGAAAAAGAAAAAGAA] [+] EMBL CD144770 [ACCTGATCGCTGGAATGCTTTAGGATTTGCAGATCGCTGATGAGAAACTGTGGTGAATGAGTACACAGTCAGGGACAACCAAATGTATTTAAACACAAAATTACAGAATCTCTTAGTAAAATCTGAGAACCATACAACAAATATTTAATTTGCAAAATATCAATCAGATGTCTCAAACTTGACCGTTTCTTTTGCAAATATTAGCCAATAATATCAGACTTCATTGTTCTTTCGTTTCTATACTAATCATTCTTTGTTGTTGTTGTTTTCTTTTCTTTCATCTTCTTAACAATCTGCTTCCAAACATTTCACTTCCGATTGATGAAACATACTACTACTTATATCTATCGCCATCAGTAACACAT ] [+] EMBL CD144743 [ACCTGATCGCTGGAATGCTTTAGGATTTGCAGATCGCTGATGAGAAACTGTGGTGAATGAGTACACAGTCAGGGACAACCAAATGTATTTAAACACAAAATTACAGAATCTCTTAGTAAAATCTGAGAACCATACAACAAATATTTAATTTGCAAAATATCAATCAGATGTCTCAAACTTGACCGTTTCTTTTGCAAATATTAGTCAATAATATCAGACTTCATTGTTCTTTCGTTTCTATACTAATCATTCTTTGTTGTTGTTGTTTTCTTTTCTTTCATCTTCTTAACAATCTGCTTCCAAACATTTCACTTCCGATTGATGAAACATACTACTACTTATATCTATCACCATCAGTAACACAT ] [+] EMBL CD144813 [ACCTGATCGCTGGAATGCTTTAGGATTTGCAGATCGCTGATGAGAAACTGTGGTGAATGAGTACACAGTCAGGGACAACCAAATGTATTTAAACACAAAATTACAGAATCTCTTAGTAAAATCTGAGAACCATACAACAAATATTTAATTTGCAAAATATCAATCAGATGTCTCAAACTTGACCGTTTCTTTTGCAAATATTAGTCAATAATATCAGACTTCATTGTTCTTTCGTTTCTATACTAATCATTCTTTGTTGTTGTTGTTTTCTTTTCTTTCATCTTCTTAACAATCTGCTTCCAAACATTTCACTTCCGATTGATGAAACATACTACTACTTATATCTATCACCATCAGTAACACAT ] [+] EMBL CD144830 [ACCTGATCGCTGGAATGCTTTAGGATTTGCAGATCGCTGATGAGAAACTGTGGTGAATGAGTACACAGTCAGGGACAACCAAATGTATTTAAACACAAAATTACAGAATCTCTTAGTAAAATCTGAGAACCATACAACAAATATTTAATTTGCAAAATATCAATCAGATGTCTCAAACTTGACCGTTTCTTTTGCAAATATTAGTCAATAATATCAGACTTCATTGTTCTTTCGTTTCTATACTAATCATTCTTTGTTGTTGTTGTTTTCTTTTCTTTCATCTTCTTAACAATCTGCTTCCAAACATTTCACTTCCGATTGATGAAACATACTACTACTTATATCTATCACCATCAGTAACACAT ] [+] EMBL CD144793 [ACCTGATCGCTGGAATGCTTTAGGATTTGCAGATCGCTGATGAGAAACTGTGGTGAATGAGTACACAGTCAGGGACAACCAAATGTATTTAAACACAAAATTACAGAATCTCTTAGTAAAATCTGAGAACCATACAACAAATATTTAATTTGCAAAATATCAATCAGATGTCTCAAACTTGACCGTTTCTTTTGCAAATATTAGTCAATAATATCAGACTTCATTGTTCTTTCGTTTCTATACTAATCATTCTTTGTTATTGTTGTTTTCTTTTCTTTCATCTTCTTAACAATCTGCTTCCAAACATTTCACTTCCGATTGATGAAACATACTACTACTTATATCTATCACCAT ] [+] EMBL CD144809 [ACCTGATCGCTGGAATGCTTTAGGATTTGCAGATCGCTGATGAGAAACTGTGGTGAATGAGTACACAGTCAGGGACAACCAAATGTATTTAAACACAAAATTACAGAATCTCTTAGTAAAATCTGAGAACCATACAACAAATATTTAATTTGCAAAATATCAATCAGATGTCTCAAACTTGACCGTTTCTTTTGCAAATATTAGTCAATAATATCAGACTTCATTGTTCTTTCGTTTCTATACTAATCATTCTTTGTTGTTGTTGTTTTCTTTTCTTTCATCTTCTTAACAATCTGCTTCCAAACATTTCACTTCCGATTGATGAAACATACTACTACTTATATCTATCACCAT ] [+] EMBL CD144747 [ACCTGATCGCTGGAATGCTTTAGGATTTGCAGATCGCTGATGAGAAACTGTGGCGAATGAGTACACAGTCAGGGACAACCAAATGTATTTAAACACAAAATTACAGAATCTCTCAGTAAAATCTGAGAACCATACAACAAATATTTAATTTGCAAAATATCAATCAGATGTCTCAAACTTGACCGTTTCTTTTGCAAATATTAGTCAATAATATCAGACTTCATTGTTCTTTCGTTTCTATACTAATCATTCTTTGTTGTTGTTGTTTTCTTTTCTTTCATCTTCTTAACAATCTGCTTCCAAACATTTCACTTCCGATTGATGAAACATACTACTACTTATATCTATCACCATCAGTAACACAT ] [+] EMBL CD144737 [ACCTGATCGCTGGAATGCTTTAGGATTTGCAGATCGCTGATGAGAAACTGTGGTGAATGAGTACACAGTCAGGGACAACCAAATGTATTTAAACACAAAATTACAGAATCTCTTAGTAAAATCTGAGAACCATACAACAAATATTTAATTTGCAAAATATCAATCAGATGTCTCAAACTTGACCGTTTCTTTTGCAAATATTAGTCAATAATATCAGACTTCATTGTTCTTTCGTTTCTATACTAATCATTCTTTGTTGTTGTTGTTTTCTTTTCTTTCATCCTCTTAACAACCTGCTTCCAAACATTTCACTTCCGATTGATGAAACATACTACTACTTATATCTATCACCATCAGTAACACAT ] [+] EMBL CD144751 [ACCTGATCGCTGGAATGCTTTAGGATTTGCAGATCGCTGATGAGAAACTGTGGTGAATGAGTACACAGTCAGGGACAACCAAATGTATTTAAACACAAAATTACAGAATCTCTTAGTAAAATCTGAGAACCATACAACAAATATTTAATTTGCAAAATATCAATCAGATGTCTCAAACTTGACCGTTTCTTTTGCAAATATTATTCAATAATATCAGACTTCATTGTTCTTTCGTTTCTATACTAATCATTCTTTGTTGTTGTTGTTTTCTTTTCTTTCATCTTCTTAACAACCTGCTTCCAAACATTTCACTTCCGATTGATGAAACATACTACTACTTATATCTATCACCAT ] [-] EMBL CD144746 [ CCTGATCGCTGGAATGCTTTAGGATTTGCAGATCGCTGATGAGAAACTGTGGTGAATGAGTACACAGTCAGGGACAACCAAATGTATTTAAACACAAAATTACAGAATCTCTTAGTAAAATCTGAGAACCATACAACAAATATTTAATTTGCAAAATATCAATCAGATGTCTCAAACTTGACCGTTTCTCTTGCAAATATTAGTCAATAATATCAGACTTCATTGTTCTTTCGTTTCTATACTAATCATTCTTTGTTGTTGTTGCTCTCTTTTCTTTCATCTTCTTAACAATCTGCTTCCAAACATTTCACTTCCGATTGATGAAACATACTACTACTTATATCTATCACCATCAGTAACACATA ] [-] EMBL CD088274 [ CCTGATCGCTGGAATGCTTTAGGATTTGCAGATCGCTGATGAGAAACTGTGGTGAATGAGTACACAGTCAGGGACAACCAAATGTATTTAAACACAAAATCACAGAATCTCTTAGTAAAATCTGAGAACCATACAACAAATATTTAATTTGCAAAATATCAATCAGATGTCTCAAACTTGACCGTTTCTTTTGCAAATATTAGCCAATAATATCAGACTTCATTGTTCTTTCGTTTCTATACTAATCATTCTTTGTTGTTGTTGTTTTCTTTTCTTTCATCTTCTTAACAATCTGCTTCCAAACATTTCACTTCCGATTGATGAAACATACTACTACTTATATCTATCACCATCAGTAACACATA ] [-] EMBL CD144714 [ CCTGATCGCTGGAATGCTTTAGGATTTGCAGATCGCTGATGAGAAACTGTGGTGAATGAGTACACAGTCAGGGACAACCAAATGTATTTAAACACAAAATTACAGAATCTCTTAGTAAAATCTGAGAACCATACAACAAATATTTAATTTGCAAAATATCAATCAGATGTCTCAAACTTGACCGTTTCTTTTGCAAATATTAGTCAATAATATCAGACTTCATTGTTCTTTCGTTTCTATACTAATCATTCTTTGTTGTTGTTGTTTTCTTTTCTTTCATCTTCTTAACAATCTGCTTCCAAACATTTCACTTCCGATTGATGAAACATACTACTACTTATATCTATCACCATC ] [-] EMBL CD144733 [ CCTGATCGCTGGAATGCTTTAGGATCTGCAGATCGCTGATGAGAAACTGTGGTGAATGAGTACACAGTCAGGGACAACCAAATGTATTTAAACACAAAATTACAGAATCTCTTAGTAAAATCTGAGAACCATACAACAAATATTTAATTTGCAAAATATCAATCAGATGTCTCAAACTTGACCGTTTCTTTTGCAAATATTAGTCAATAATATCAGACTTCATTGTTCTTTCGTTTCTATACTAATCATTCTTTGTTGTTGTTGTTTTCTTTTCTTTCATCTTCTTAACAATCTGCTTCCAAACATTTCACTTCCGATTGATGAAACATACTACTACTTATATCTATCACCATCAGTAACACATA ] [+] EMBL CD149189 [ GAATGAGTACACAGTCAGGGACAACCAAATGTATTTAAACACAAAATTACAGAATCTCTTAGTAAAGTCTGAGAACCATACAACAAATATTTAATTTGCAAAATATCAATCAGATGTCTCAAACTTGACCGTTTCTTTTGCAAATATTAGTCAATAATATCAGACTTCATTGTTCTTTCGTTTCTATACTAATCATTCTTTGTTGTTGTTGTTTTCTTTTCTTTCATCTTCTTAACAATCTGCTTCCAAACATTTCACTTCCGATTGGTGAAACATACTACTACTTATATCTATCACCATCAGTAACACATATCACAAAACTACCACC CCCCCCAAAAGAAAAAGAAAAAGAA] [-] EMBL CD133075 [ ATATTTAATTTGCAAAATATCAATCAGATGTCTCAAACTTGACCGTTTCGGGTGCAAATATTAGTCAATAATATCAGACTTCATTGTTCTTTCGTTTCTATACTAATCACTCTTCGATGATGTTGTTTTCTTTTCTTTCATAATATTAACAATCTGCTTCCAAACATTTCACTTCCGATTGATGAAACATACTACTACTTATATCTATCACCATCAGTAACACATATCACAAAACTACCACCTCCTCCCA ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||