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Schistosoma mansoni
cluster # 10404 cluster # 10404       Sequences # 16       consensus # 8


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10404#0 length = 794 sequences # 6  
consensus_10404#1 length = 627 sequences # 1  
consensus_10404#2 length = 606 sequences # 3  
consensus_10404#3 length = 504 sequences # 2  
consensus_10404#4 length = 437 sequences # 1  
consensus_10404#5 length = 372 sequences # 1  
consensus_10404#6 length = 316 sequences # 1  
consensus_10404#7 length = 119 sequences # 1  

consensusID : consensus_10404#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 794
fasta sequence
                              [GCAAGTCAATCACCGAGATTCAGGAACAACAAGACAGGTGGGTAGAGCACTTTGAAGAACTCTTGAAAAGATTAGCCCCACTGAACTCACCAGACATCGAAGCTAAACACACAGACATTCCTATAGATCTCATTCCACAACGGTCGAAGAAATCAACGTGGCCATCAGACAAATCAAGAGTGCAGAAGCAGCATGACCTGATAATGTACCACGTGAAGCACTGAAGTCAGACATAGAGGTAACTGCAAACATGCTCCACGTTCTATTCAAGAAGATTTGAGAAGAGGAACAAGTGCCAACGGACTGGAAAGGAGGATACTGTTATATATTGTGGCCGAGTAGATGCCTAGCTAATGTGTGACGTGATAAGACCTCCAATCAGGGAGCAGCGAAATATCGATGGGAACAGTGACACACGAAACCGTACGAGCTGTCTAGAGTGCTAACCGGTCCTGCGATCTGCCTAGCCCAGCCAGTTAAGTCCAAAACACCAATAACAGCCTCTGTGGTATCAATCATTATTTACAAACATACTGGGTTTATATACCAACCAAACAGACCACATCGTACCATAAAATGGAAAATAACATTTCTACAATATTTAGCCACATGTGGCTGTGAATAGGGGGAAAGTAATCAATAAACTGATGATAACTCAAGAATCGTATAATAATAGTTCAAAGGTCAAAATAAAGCTAATGATAAGAGGAACACGAATATGATTAGGTTAGTTACAATAGGAAATATACGTATT-ACGTCGGCCAATAACTCCGCCTGTAGCTCTTCTAGAGTAC]

[+] EMBL CD071627             [GCAAGTCAATCACCGAGATTCAGGAACAACAAGACAGGTGGGTAGAGCACTTTGAAGAACTCTTGAAAAGATTAGCCCCACTGAACTCACCAGACATCGAAGCTAAACACACAGACATTCCTATAGATCTCATTCCACAACGGTCGAAGAAATCAACGTGGCCATCAGACAAATCAAGAGTGCAGAAGCAGCATGACCTGATAATGTACCACGTGAAGCACTGAAGTCAGACATAGAGGTAACTGCAAACATGCTCCACGTTCTATTCAAGAAGATTTGAGAAGAGGAACAAGTGCCAACGGACTGGAAAGGAGGATACTGTTATATATTGTGGCCGAGTAGATGCCTAGCTAATGTGTGACGTGATAAGACCTCCAATCAGGGAGCAGCGAAATATCGATGGGAACAGTGACACACGAAACCGTACGAGCTGTCTAGAGTGCTAACCGGTCCTGCG                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD071730             [GCAAGTCAATCACCGAGATTCAGGAACAACAAGACAGGTGGGTAGAGCACTTTGAAGAACTCTTGAAAAGATTAGCCCCACTGAACTCACCAGACATCGAAGCTAAACACACAGACATTCCTATAGATCTCATTCCACAACGGTCGAAGAAATCAACGTGGCCATCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD129508             [                                                                                                                                                                                    TGCAGAAGCAGCATGACCTGATAATATACCACGTGAAGCACTGAAGTCAGACATAGAGGTAACTGCAAACATGCTCCACGTTCTATTCAAGAAGATTTGAGAAGAGGAACAAGTGCCAACGGACTGGAAAGAAGGATACTGTTATATATTGTGGCCGAGTAGATGCCTAGCTAATGTGTGACGTGATAAGACCTCCAATCAGGGAGCAGCGAAATATCGATGGGAACAGTGACACACGAAACCGTACGAGCTGTCTAGAG                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD200496             [                                                                                                                                                                                                                                                                                                                             ACTGTTATATATTGTGGCCGAGTAGATGCCTAGCTAATGTGTGACGTGATAAGACCTCCAATCAGGGAGCAGCGAAATATCGATGGGAACAGTGACACACGAAACCGTACGAGCTGTCTAGAGTGCTAACCGGTCCTGCGATCTGCCTAGCCCAGCCAGTTAAGTCCAAAACACCAATAACAGCCTCTGTGGTATCAATCATTATTTACAAACATACTGGGTTTATATACCAACCAAACAGACCACATCGTACCATAAAATGGAAAATAACATTTCTACAATATTTAGCCACATGTGGCTGTGAATAGGGGGAAAGTAATCAATAAACTGATGATAACTCAAGGATCGTATAATAATAGTTCAAAGGTCAAAATAAAGCTAATGATAAGAGGAACACGAATATGATTAGGTTAGTTACAATAGGAAATATACGTATTAACGTGGCCCAATAACTCCGCCTGTAGCTCTTCTAGAGTAC]
[+] EMBL CD200599             [                                                                                                                                                                                                                                                                                                                             ACTGTTATATATTGTGGCCGAGTAGATGCCTAGCTAATGTGTGACGTGATAAGACCTCCAATCAGGGAGCAGCGAAATATCGATGGGAACAGTGACACACGAAACCGTACGAGCTGTCTAGAGTGCTAACCGGTCCTGCGATCTGCCTAGCCCAGCCAGTTAAGTCCAAAACACCAATAACAGCCTCTGTGGTATCAATCATTATTTACAAACATACTGGGTTTATATACCAACCAAACAGACCACATCGTACCATAAAATGGAAAATAACATTTCTACAATATTTAGCCACATGTGGCTGTGAATAGGGGGAAAGTAATCAATAAACTGATGATAACTCAAGAATCGTATAATAATAGTTCAAAGGTCAAAATAAAGCTAATGATAAGAGGAACACGAATATGATTAGGTTAGTTACAATAGGAAATATACGTATT ACGTCGGCCAATAACTCCGCCTGTAGCTCTTCTAGAGT  ]
[+] EMBL CD200513             [                                                                                                                                                                                                                                                                                                                             ACTGTTATATATTGTGGCCGAGTAGATGCCTAGCTAATGTGTGACGTGATAAGACCTCCAATCAGGGAGCAGCGAAATATCGATGGGAACAGTGACACACGAAACCGTACGAGCTGTCTAGAGTGCTAACCGGTCCTGCGATCTGCCTAGCCCAGCCAGTTAAGTCCAAAACACCAATAACAGCCTCTGTGGTATCAATCATTATTTACAAACATACTGGGTTTATATACCAACCAAACAGACCACATCGTACCATAAAATGGAAAATAACATTTCTACAATATTTAGCCACATGTGGCTGTGAATAGGGGGAAAGTAATCAATAAACTGATGATAACTCAAGAATCGTATAATAATAGTTCAAAGGTCAAAATAAAGCTAACGATAAGAGGAACACGAATATGATTAGGTTAGTTACAATAGGAAATATACGTATT ACGTCGGCCAATAACTCCGCCTGTAGCTCTTCTAGGGT  ]


>consensus_10404#0 GCAAGTCAATCACCGAGATTCAGGAACAACAAGACAGGTGGGTAGAGCACTTTGAAGAAC TCTTGAAAAGATTAGCCCCACTGAACTCACCAGACATCGAAGCTAAACACACAGACATTC CTATAGATCTCATTCCACAACGGTCGAAGAAATCAACGTGGCCATCAGACAAATCAAGAG TGCAGAAGCAGCATGACCTGATAATGTACCACGTGAAGCACTGAAGTCAGACATAGAGGT AACTGCAAACATGCTCCACGTTCTATTCAAGAAGATTTGAGAAGAGGAACAAGTGCCAAC GGACTGGAAAGGAGGATACTGTTATATATTGTGGCCGAGTAGATGCCTAGCTAATGTGTG ACGTGATAAGACCTCCAATCAGGGAGCAGCGAAATATCGATGGGAACAGTGACACACGAA ACCGTACGAGCTGTCTAGAGTGCTAACCGGTCCTGCGATCTGCCTAGCCCAGCCAGTTAA GTCCAAAACACCAATAACAGCCTCTGTGGTATCAATCATTATTTACAAACATACTGGGTT TATATACCAACCAAACAGACCACATCGTACCATAAAATGGAAAATAACATTTCTACAATA TTTAGCCACATGTGGCTGTGAATAGGGGGAAAGTAATCAATAAACTGATGATAACTCAAG AATCGTATAATAATAGTTCAAAGGTCAAAATAAAGCTAATGATAAGAGGAACACGAATAT GATTAGGTTAGTTACAATAGGAAATATACGTATTACGTCGGCCAATAACTCCGCCTGTAG CTCTTCTAGAGTAC



consensusID : consensus_10404#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 627
fasta sequence
                              [GTGTATAGTGTGTGTGTGTGTTTGTGCGAGCGTGTTGATCTAGCATAAATTATGTAGTGAATGTGTTTGTTGGTGGTAACTGTGGAGTTGGCGTGTAATGATGCCCTTGCTGGGCAAAACACAGTAAATGTATTGGACGGTGTTTAATCAGCTGGGCTAAATAGATAGTGAGCTGTTTAGTTAACCACAGGTTGGTGTATATCACAACCTGTTTCATGTGCAGCTGAAATGTTATTTGTGATGTTACATGTGTATGTGGTTGATGGTGAACGTTGTATTTGGTGTGATTGAGTATGTTATTATGTTTTGTAGAGTGTGCTATGTATTGGTGTTTATGTTTGGCTGATTGATGTGTATTTGAGTGTATAGTGTATAGTGTGTGTGTGTGTGTTTGTGCGAGCGTGTTGATCTAGCATAAATTATGTAGTGAATGTGTTTGTTGGTGGTAACTGTGGAGTTGGCGTGTAATGATGCCCTTGCTGGGCAAAACACAGTAAATGTATTGGACGGTGTTTAATCAGCTGGGCTAAGTAGATAGTGAGCTGTTTATTAATCACAGGTTGGTGTATATCACAACCTGNTTCATGTGCAGCTGAAATGTTATTTGTGATGTTACATGTGTATGTG]

[+] EMBL CD088917             [GTGTATAGTGTGTGTGTGTGTTTGTGCGAGCGTGTTGATCTAGCATAAATTATGTAGTGAATGTGTTTGTTGGTGGTAACTGTGGAGTTGGCGTGTAATGATGCCCTTGCTGGGCAAAACACAGTAAATGTATTGGACGGTGTTTAATCAGCTGGGCTAAATAGATAGTGAGCTGTTTAGTTAACCACAGGTTGGTGTATATCACAACCTGTTTCATGTGCAGCTGAAATGTTATTTGTGATGTTACATGTGTATGTGGTTGATGGTGAACGTTGTATTTGGTGTGATTGAGTATGTTATTATGTTTTGTAGAGTGTGCTATGTATTGGTGTTTATGTTTGGCTGATTGATGTGTATTTGAGTGTATAGTGTATAGTGTGTGTGTGTGTGTTTGTGCGAGCGTGTTGATCTAGCATAAATTATGTAGTGAATGTGTTTGTTGGTGGTAACTGTGGAGTTGGCGTGTAATGATGCCCTTGCTGGGCAAAACACAGTAAATGTATTGGACGGTGTTTAATCAGCTGGGCTAAGTAGATAGTGAGCTGTTTATTAATCACAGGTTGGTGTATATCACAACCTGNTTCATGTGCAGCTGAAATGTTATTTGTGATGTTACATGTGTATGTG]


>consensus_10404#1 GTGTATAGTGTGTGTGTGTGTTTGTGCGAGCGTGTTGATCTAGCATAAATTATGTAGTGA ATGTGTTTGTTGGTGGTAACTGTGGAGTTGGCGTGTAATGATGCCCTTGCTGGGCAAAAC ACAGTAAATGTATTGGACGGTGTTTAATCAGCTGGGCTAAATAGATAGTGAGCTGTTTAG TTAACCACAGGTTGGTGTATATCACAACCTGTTTCATGTGCAGCTGAAATGTTATTTGTG ATGTTACATGTGTATGTGGTTGATGGTGAACGTTGTATTTGGTGTGATTGAGTATGTTAT TATGTTTTGTAGAGTGTGCTATGTATTGGTGTTTATGTTTGGCTGATTGATGTGTATTTG AGTGTATAGTGTATAGTGTGTGTGTGTGTGTTTGTGCGAGCGTGTTGATCTAGCATAAAT TATGTAGTGAATGTGTTTGTTGGTGGTAACTGTGGAGTTGGCGTGTAATGATGCCCTTGC TGGGCAAAACACAGTAAATGTATTGGACGGTGTTTAATCAGCTGGGCTAAGTAGATAGTG AGCTGTTTATTAATCACAGGTTGGTGTATATCACAACCTGNTTCATGTGCAGCTGAAATG TTATTTGTGATGTTACATGTGTATGTG



consensusID : consensus_10404#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 606
fasta sequence
                              [AAAACAAAGAATTAGCAGTTTTTAACAAATATGAAATATTAACCAAGTGTTTATCTGTTTCTTCAGAAGTTTTCATGAAGTTTTCACTAACCTGAACTTCAGTGCTCCTCAATGTTGTTTCAACATCTTTGATGGGTGTTGAAGTACTCAAATCGTTGACATCCGATTTCTTCTCAACACGGCAGTCATTGACTTTCAAGCTATGAGTGTCCGGATTGTTACTTTCTATACATTTCTTCCCTTTTTGACACCAAATACATGTCATATTCGCCGTCGTTGCATCTTGGCATGTTTCACTTGTATTGTATTGCGAACAAATTTCTATGAAAAGAATAGGCTGAAATCATTTGAAGTTAATGAATGGGAGAACAGAGAAATAAGAAACCCTTAAATATTACTCAATGACGTGATGGTGATTTCTGAGTTAAGTGACTTATCCATTCGGTGGAAAATGGACAACATGGTGCATCATGCAAAACTCAGTACACCTTCAATTACTCTTCTATTTCAACACTGCATTTTTGGATTGAATGAAATTACTTTGAGTACAAAGAACAAGTGACAACTTTTTGGCAAGTGGAAACTGATGACTTTTAATAACTGTTC]

[-] EMBL CD116068             [AAAACAAAGAATTAGCAGTTTTTAACAAATATGAAATATTAACCAAGTGTTTATCTGTTTCTTCAGAAGTTTTCATGAAGTTTTCACTAACCTGAACTTTAGTGCTCCTCAATGTTGTTTCAACATCTTTGATGGGTGTTGAAGTACTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD154415             [                                                                                                 TTCAGTGCTCCTCAATGTTGTTTCAACATCTTTGATGGGTGTTGAAGTACTCAAATCGTTGACATCCGATTTCTTCTCAACACGGCAGTCATTGACTTTCAAGCTATGAGTGTCCGGATTGTTACTTTCTATACATTTCTTCCCTTTTTGACACCAAATACATGTCATATTCGCCGTCGTTGCATCTTGGCATGTTTCACTTGTATTGTATTGCGAACAAATTTCTATGAAAAGAATAGGCTGAAATCATTTGAAGTTAATGAATGGGAGAACAGAGAAATAAGAAACCCTTAAATATTACTCAATGACGTGATGGTGATTTCTGAGTTAAGTGACTTATCCATTCGGTGGAAAATGGACAACATGGTGCATCATGCAAAACTCAGTACACCTTCAATTACTCTTCTATTTCAACACTGCATTTTTGGATTGAATGAAATTACTTTGAGTACAAAGAACAAGTGACAACTTTTTGGCAAGTGGAAACTGATGACTTTTAATAACTGTTC]
[+] EMBL CD154471             [                                                                                                 TTCAGTGCTCCTCAATGTTGTTTCAACATCTTTGATGGGTGTTGAAGTACTCAAATCGTTGACATCCGATTTCTTCTCAACACGGCAGTCATTGACTTTCAAGCTATGAGTGTCCGGATTGTTACTTTCTATACATTTCTTCCCTTTTTGACACCAAATACATGTCATATTCGCCGTCGTTGCATCTTGGCATGTTTCACTTGTATTGTATTGCGAACAAATTTCTATGAAAAGAATAGGCTGAAATCATTTGAAGTTAATGAATGGGAGAACAGAGAAATAAGAAACCCTTAAATATTACTCAATGACGTGATGGTGATTTCTGAGTTAAGTGACTTATCCATTCGGTGGAAAATGGACAACATGGTGCATCATGCAAAACTCAGTACACCTTCAATTACTCTTCTATTTCAACACTGCATTTTTGGATTGAATGAAATTACTTTGAGTACAAAGAACAAGTGACAACTTTTTGGCAAGTGGAAACTGATGACTTTTAATAACTGTTC]


>consensus_10404#2 AAAACAAAGAATTAGCAGTTTTTAACAAATATGAAATATTAACCAAGTGTTTATCTGTTT CTTCAGAAGTTTTCATGAAGTTTTCACTAACCTGAACTTCAGTGCTCCTCAATGTTGTTT CAACATCTTTGATGGGTGTTGAAGTACTCAAATCGTTGACATCCGATTTCTTCTCAACAC GGCAGTCATTGACTTTCAAGCTATGAGTGTCCGGATTGTTACTTTCTATACATTTCTTCC CTTTTTGACACCAAATACATGTCATATTCGCCGTCGTTGCATCTTGGCATGTTTCACTTG TATTGTATTGCGAACAAATTTCTATGAAAAGAATAGGCTGAAATCATTTGAAGTTAATGA ATGGGAGAACAGAGAAATAAGAAACCCTTAAATATTACTCAATGACGTGATGGTGATTTC TGAGTTAAGTGACTTATCCATTCGGTGGAAAATGGACAACATGGTGCATCATGCAAAACT CAGTACACCTTCAATTACTCTTCTATTTCAACACTGCATTTTTGGATTGAATGAAATTAC TTTGAGTACAAAGAACAAGTGACAACTTTTTGGCAAGTGGAAACTGATGACTTTTAATAA CTGTTC



consensusID : consensus_10404#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 504
fasta sequence
                              [AATATTTTCGAGCATCATCGCCATAACCGCTATTTTAATCGCTACCATAGCAACCGCCACCGTACCCACCCGAATAGTCATGTGATGTGGTGTAGGCGGTGGCGTAACC-AATGGCTACTAAGAAGACGAGTGTGAGTGACTGTTTCATTTTTCAAATTGTTGGTGTTGTTGTTGTTGTTTAGACGAGTGACGTATGTGTATGAGATAAGTATAGATGTATGTATACATGTGTATATATGATTATATGTGAATAAATAAACATTTGTTTATCATTTGTCTGTCTGTCTGTCTGTCTGTCTGTTTATAATTAGCGGTGCAGATATTTATGTAAATACACATAGATTTGTGTGTACGGGAGTGTAGATAGATGAGTGTATAGTGTATAGTGTGTGTGTGTGTGTTTGTGCGAGCGTGTTGATCTAGCATAAGTTATGTAGTGAATGTGTTTGTTAGTGGTAACTGTGGAGTTGGCGTGTAATGATGCCCTTGCTGGGCAAAACACAG]

[+] EMBL CD128970             [AATATTTTCGAGCATCATCGCCATAACCGCTATTTTAATCGCTACCATAGCAACCGCCACCGTACCCACCCGAATAGTCATGTGATGTGGTGTAGGCGGTGGCGTAACC AATGGCTACTAAGAAGACGAGTGTGAGTGACTGTTTCATTTTTCAAATTGTTGGTGTTG                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD128642             [                                      TCGCTA CGTA CAACCGCCA CGTA  CACCCGAATAGTCATGTGATGTGGTGTAGGCGGTGGCGTAACCAAATGGCTACTAAGAAGACGAGTGTGAGTGACTGTTTCATTTTTCAAATTGTTGTTGTTGTTGTTGTTGTTTAGACGAGTGACGTATGTGTATGAGATAAGTATAGATGTATGTATACATGTGTATATATGATTATATGTGAATAAATAAACATTTGTTTATCATTTGTCTGTCTGTCTGTCTGTCTGTCTGTTTATAATTAGCGGTGCAGATATTTATGTAAATACACATAGATTTGTGTGTACGGGAGTGTAGATAGATGAGTGTATAGTGTATAGTGTGTGTGTGTGTGTTTGTGCGAGCGTGTTGATCTAGCATAAGTTATGTAGTGAATGTGTTTGTTAGTGGTAACTGTGGAGTTGGCGTGTAATGATGCCCTTGCTGGGCAAAACACAG]


>consensus_10404#3 AATATTTTCGAGCATCATCGCCATAACCGCTATTTTAATCGCTACCATAGCAACCGCCAC CGTACCCACCCGAATAGTCATGTGATGTGGTGTAGGCGGTGGCGTAACCAATGGCTACTA AGAAGACGAGTGTGAGTGACTGTTTCATTTTTCAAATTGTTGGTGTTGTTGTTGTTGTTT AGACGAGTGACGTATGTGTATGAGATAAGTATAGATGTATGTATACATGTGTATATATGA TTATATGTGAATAAATAAACATTTGTTTATCATTTGTCTGTCTGTCTGTCTGTCTGTCTG TTTATAATTAGCGGTGCAGATATTTATGTAAATACACATAGATTTGTGTGTACGGGAGTG TAGATAGATGAGTGTATAGTGTATAGTGTGTGTGTGTGTGTTTGTGCGAGCGTGTTGATC TAGCATAAGTTATGTAGTGAATGTGTTTGTTAGTGGTAACTGTGGAGTTGGCGTGTAATG ATGCCCTTGCTGGGCAAAACACAG



consensusID : consensus_10404#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 437
fasta sequence
                              [CGGATTCCAAGTTAGTAATTGCCTCATGATGCAGTTTGGTGATTTCCTCAATGTATGTTCTATCCACTTGCAACGTCTTTCCCTAATTGCCTCTTCAGCTAGAAGCTGGTTTGTCCTCTCCCATAAAACGCTGTTGCTGATGATATTCAGGCAGTGAATGTTGAGTATTTTGCGTAAACAACTGTTTATAAATACTTGTACCTTCTTGACGATGGATGTAGGTATGTGCCAAAAGACGTCGTTTAATTAACCTAATTAGTTCAAAACCATCTATTATTTTCTACATATACATCATGTTTACTCACAATTTTTAATTTTGGCTGTCTTTTGCCTACAATTCTTGTTGGTCCTTCTTATTCTTCATTTAAGCTTTTATCTTACGTGAAGGGTTCTTCGGTCATGTCCGACATTGAATGATGAAATAGTTGAATAGAAGA]

[+] EMBL CD086897             [CGGATTCCAAGTTAGTAATTGCCTCATGATGCAGTTTGGTGATTTCCTCAATGTATGTTCTATCCACTTGCAACGTCTTTCCCTAATTGCCTCTTCAGCTAGAAGCTGGTTTGTCCTCTCCCATAAAACGCTGTTGCTGATGATATTCAGGCAGTGAATGTTGAGTATTTTGCGTAAACAACTGTTTATAAATACTTGTACCTTCTTGACGATGGATGTAGGTATGTGCCAAAAGACGTCGTTTAATTAACCTAATTAGTTCAAAACCATCTATTATTTTCTACATATACATCATGTTTACTCACAATTTTTAATTTTGGCTGTCTTTTGCCTACAATTCTTGTTGGTCCTTCTTATTCTTCATTTAAGCTTTTATCTTACGTGAAGGGTTCTTCGGTCATGTCCGACATTGAATGATGAAATAGTTGAATAGAAGA]


>consensus_10404#4 CGGATTCCAAGTTAGTAATTGCCTCATGATGCAGTTTGGTGATTTCCTCAATGTATGTTC TATCCACTTGCAACGTCTTTCCCTAATTGCCTCTTCAGCTAGAAGCTGGTTTGTCCTCTC CCATAAAACGCTGTTGCTGATGATATTCAGGCAGTGAATGTTGAGTATTTTGCGTAAACA ACTGTTTATAAATACTTGTACCTTCTTGACGATGGATGTAGGTATGTGCCAAAAGACGTC GTTTAATTAACCTAATTAGTTCAAAACCATCTATTATTTTCTACATATACATCATGTTTA CTCACAATTTTTAATTTTGGCTGTCTTTTGCCTACAATTCTTGTTGGTCCTTCTTATTCT TCATTTAAGCTTTTATCTTACGTGAAGGGTTCTTCGGTCATGTCCGACATTGAATGATGA AATAGTTGAATAGAAGA



consensusID : consensus_10404#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 372
fasta sequence
                              [GAGTCAGACAGGCCGAGATCAGATACGTGTCGGTCCAGTGGGGGCTGGTTTCTTTGCTGCTTTGTGTGCTTCGGTGCGCGTTGTGGTGAGGTTACTGGACTCTGACCCGGGTCGATCGTGGGCGGTTTCAGCTGTTAGTGTCGTGCAGCTAGCAACGCGCGAGGACATGTTCCACGTTGCGTCAAGCGGCTGTACTTCCATGGTCTGGCGCGCGACGGCTAACTCAGAACTGGCACGGACCAGGGGAATCCGACTGTCTAATTAAAACAAAGCATTGCGATGTCCACTGATTGGTTTTGACGCAATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAACCAAGCGCGGGTAAACGGCGG]

[+] EMBL CD060927             [GAGTCAGACAGGCCGAGATCAGATACGTGTCGGTCCAGTGGGGGCTGGTTTCTTTGCTGCTTTGTGTGCTTCGGTGCGCGTTGTGGTGAGGTTACTGGACTCTGACCCGGGTCGATCGTGGGCGGTTTCAGCTGTTAGTGTCGTGCAGCTAGCAACGCGCGAGGACATGTTCCACGTTGCGTCAAGCGGCTGTACTTCCATGGTCTGGCGCGCGACGGCTAACTCAGAACTGGCACGGACCAGGGGAATCCGACTGTCTAATTAAAACAAAGCATTGCGATGTCCACTGATTGGTTTTGACGCAATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAACCAAGCGCGGGTAAACGGCGG]


>consensus_10404#5 GAGTCAGACAGGCCGAGATCAGATACGTGTCGGTCCAGTGGGGGCTGGTTTCTTTGCTGC TTTGTGTGCTTCGGTGCGCGTTGTGGTGAGGTTACTGGACTCTGACCCGGGTCGATCGTG GGCGGTTTCAGCTGTTAGTGTCGTGCAGCTAGCAACGCGCGAGGACATGTTCCACGTTGC GTCAAGCGGCTGTACTTCCATGGTCTGGCGCGCGACGGCTAACTCAGAACTGGCACGGAC CAGGGGAATCCGACTGTCTAATTAAAACAAAGCATTGCGATGTCCACTGATTGGTTTTGA CGCAATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAACCAAGCGCG GGTAAACGGCGG



consensusID : consensus_10404#6
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 316
fasta sequence
                              [CACTCTGAAGCGGCGGGGCGGCCGAGATCAGATACGTGTCGGTCCAGTTGGGGGCTGGTTTCTTTGCTGCTTTGTGTGCTTCGGTGCGCGTTGTGGTGAGGTTACTGGACTCTGACCCGGGTCGATCGTGGGCGGTTTCAGCTGTTAGTGTCGTGCAGCTAGCAACGCGCGAGGACATGTTCCACGTTGCGTCAAGCGGCTGTACTTCCATGGTCTGGCGCGCGACGGCCAACTCAGAACTGGCACGGACCAGGGGAATCCGACTGTCTAATTAAAACAAAGCATTGCGATGTCCACTGATTGGTTTTGACGCAAT]

[+] EMBL CD131862             [CACTCTGAAGCGGCGGGGCGGCCGAGATCAGATACGTGTCGGTCCAGTTGGGGGCTGGTTTCTTTGCTGCTTTGTGTGCTTCGGTGCGCGTTGTGGTGAGGTTACTGGACTCTGACCCGGGTCGATCGTGGGCGGTTTCAGCTGTTAGTGTCGTGCAGCTAGCAACGCGCGAGGACATGTTCCACGTTGCGTCAAGCGGCTGTACTTCCATGGTCTGGCGCGCGACGGCCAACTCAGAACTGGCACGGACCAGGGGAATCCGACTGTCTAATTAAAACAAAGCATTGCGATGTCCACTGATTGGTTTTGACGCAAT]


>consensus_10404#6 CACTCTGAAGCGGCGGGGCGGCCGAGATCAGATACGTGTCGGTCCAGTTGGGGGCTGGTT TCTTTGCTGCTTTGTGTGCTTCGGTGCGCGTTGTGGTGAGGTTACTGGACTCTGACCCGG GTCGATCGTGGGCGGTTTCAGCTGTTAGTGTCGTGCAGCTAGCAACGCGCGAGGACATGT TCCACGTTGCGTCAAGCGGCTGTACTTCCATGGTCTGGCGCGCGACGGCCAACTCAGAAC TGGCACGGACCAGGGGAATCCGACTGTCTAATTAAAACAAAGCATTGCGATGTCCACTGA TTGGTTTTGACGCAAT



consensusID : consensus_10404#7
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 119
fasta sequence
                              [ATGCAGGTCGATTTTANAGGATCCCCCAACCTCGACGTCCTCGAGACCAGGAGATGTGGTGTGTCAGTCGACGAGTGCTTAGGAGCCAGTTGTAGATGTAGGTGTGGTGCGGATGGGGT]

[+] EMBL CD059714             [ATGCAGGTCGATTTTANAGGATCCCCCAACCTCGACGTCCTCGAGACCAGGAGATGTGGTGTGTCAGTCGACGAGTGCTTAGGAGCCAGTTGTAGATGTAGGTGTGGTGCGGATGGGGT]


>consensus_10404#7 ATGCAGGTCGATTTTANAGGATCCCCCAACCTCGACGTCCTCGAGACCAGGAGATGTGGT GTGTCAGTCGACGAGTGCTTAGGAGCCAGTTGTAGATGTAGGTGTGGTGCGGATGGGGT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10404#0      GCAAGTCAATCACCGAGATTCAGGAACAACAAGACAGGTGGGTAGAGCACTTTGAAGAAC 60
consensus_10404#7      ------------------------------------------------------------
consensus_10404#5      ------------------------------------------------------------
consensus_10404#6      ------------------------------------------------------------
consensus_10404#3      ---------------------------------AATATTTTCGAGCATCATCGCCATAAC 27
consensus_10404#1      ------------------------------------------GTGTATAGTGTGTGTGTG 18
consensus_10404#4      --------------------------------------------------------CGGA 4
consensus_10404#2      -----------------------------------------AAAACAAAGAATTAGCAGT 19
                                                                                   

consensus_10404#0      TCTTGAAAAGATTAG--CCCCACTGAACTCACCAGACATCGAAGCT-AAACACACAGACA 117
consensus_10404#7      ------------------------------------------------------------
consensus_10404#5      ------------------------------------------------------------
consensus_10404#6      ------------------------------------------------------------
consensus_10404#3      CGCTATTTTAATCGC--TACCATAGCAACCGCCACCGTACCCACCC-GAATAGTCATGTG 84
consensus_10404#1      TGTTTGTGCGAGCGTGTTGATCTAGCATAAATTATGTAGTGAATGT-GTTTGTTGGTG-G 76
consensus_10404#4      TTCCAAGTTAGTAATTGCCTCATGATGCAGTTTGGTGATTTCCTCA-ATGTATGTTCTAT 63
consensus_10404#2      TTTTAACAAATATGAAATATTAACCAAGTGTTTATCTGTTTCTTCAGAAGTTTTCATGAA 79
                                                                                   

consensus_10404#0      TTCCTATAGATCTCATTCCACAACGGTCGAAGAAATCAACGTGGCCATCAGACAAATCAA 177
consensus_10404#7      ------------------------------------------------------------
consensus_10404#5      ----------------------GAGTCAGACAGGCCGAGATCAGATACGTGTCGGTCCAG 38
consensus_10404#6      -------------CACTCTGAAGCGGCGGGGCGGCCGAGATCAGATACGTGTCGGTCCAG 47
consensus_10404#3      ATGTGGTGTAGGCGGTGGCGTAACCAATGGCTA-CTAAGAAGACGAGTGTGAGTGACTGT 143
consensus_10404#1      TAACTGTGGAGTTGGCG-TGTAATGATGCCCTTGCTGGGCAAAACACAGTAAATGTATTG 135
consensus_10404#4      CCACTTGCAACGTCTTTCCCTAATTGCCTCTTCAGCTAGAAGCTGGTTTGTCCTCTCCCA 123
consensus_10404#2      GTTTTCACTAACCTGAACTTCAGTGCTCCTCAATGTTGTTTCAACATCTTTGATGGGTGT 139
                                                                                   

consensus_10404#0      GAGTGCAGAAGCAGCATGACCTGAT------AATGTACCACGTGAAGCACTGAAGTCAGA 231
consensus_10404#7      ------------------------------------------------------------
consensus_10404#5      T-GGGGGCTGGTTTCTTTGCTGCTT------TGTGTGCTTCGGTGCGCGTTGTGGTGAGG 91
consensus_10404#6      TTGGGGGCTGGTTTCTTTGCTGCTT------TGTGTGCTTCGGTGCGCGTTGTGGTGAGG 101
consensus_10404#3      TTCATTTTTCAAATTGTTGGTGTTG------TTGTTGTTGTTTAGACGAGTGACGTATGT 197
consensus_10404#1      GACGGTGTTTAATCAGCTGGGCTAAA-----TAGATAGTGAGCTGTTTAGTTAACCACAG 190
consensus_10404#4      TAAAACGCTGTTGCTGATGATATTCA-----GGCAGTGAATGTTGAGTATTTTGCGTAAA 178
consensus_10404#2      TGAAGTACTCAAATCGTTGACATCCGATTTCTTCTCAACACGGCAGTCATTGACTTTCAA 199
                                                                                   

consensus_10404#0      CATAGAGGTAACTGCAAACATGCTCCACGTTCTATTCAAGAAGATTTGAGAAGAGGAACA 291
consensus_10404#7      ---------------------------------ATGCAGGTCGATTTTANAGGATCCCCC 27
consensus_10404#5      TTACTGGACTCTGACCCGGGTCGATCGTGGGCGGTTTCAGCTG-TTAGTGTCGTGCAGCT 150
consensus_10404#6      TTACTGGACTCTGACCCGGGTCGATCGTGGGCGGTTTCAGCTG-TTAGTGTCGTGCAGCT 160
consensus_10404#3      GTATGAGATAAGTATAGATGTATGTATACATGTGTATATATGATTATATGTGAATAAATA 257
consensus_10404#1      GTTGGTGTATATCACAACCTGTTTCATGTGCAGCTGAAATGTTATTTGTGATGTTACATG 250
consensus_10404#4      CAACTGTTTATAAATACTTGTACCTTCTTGACGATGGATGTAGGTATGTGCCAAAAGACG 238
consensus_10404#2      GCTATGAGTGTCCGGATTGTTACTTTCTATACATTTCTTCCCTTTTTGACACCAAATACA 259
                                                         *         *               

consensus_10404#0      AGTGCCA-ACGGACTGGAAAGGAGGATAC------TGTT-ATATATT-GTGGCCGAGTA- 341
consensus_10404#7      AACCTCG-ACGTCCTCGAGACCAGGAGA-------TGTG-GTGTGTCAGTCGACGAGTG- 77
consensus_10404#5      AGCAACGCGCGAGGACATGTTCCACGTTG------CGTC-AAGCGGCTGTACTTCCATG- 202
consensus_10404#6      AGCAACGCGCGAGGACATGTTCCACGTTG------CGTC-AAGCGGCTGTACTTCCATG- 212
consensus_10404#3      AACATTTGTTTATCATTTGTCTGTCTGTC------TGTCTGTCTGTCTGTTTATAATTA- 310
consensus_10404#1      TGTATGTGGTTGATGGTGAACGTTGTATT------TGGT-GTGATTGAGTATGTTATTAT 303
consensus_10404#4      TCGTTTAATTAACCTAATTAGTTCAAAAC------CATCTATTATTTTCTACATATACAT 292
consensus_10404#2      TGTCATATTCGCCGTCGTTGCATCTTGGCATGTTTCACTTGTATTGTATTGCGAACAAAT 319
                                                                        *          

consensus_10404#0      GATGCCTAG--CTAATGTGTGACGTGATAAGAC---CTCCAATCAGGGAGCAGCGAAATA 396
consensus_10404#7      CTTAGG-AG--CCAGTTGTAGATGTAGGTGTGG---TGCGGATGGGGT------------ 119
consensus_10404#5      GTCTGGCGC--GCGACGGCTAACTCAGAACTGG---CACGGACCAGGGGAATCCGACTGT 257
consensus_10404#6      GTCTGGCGC--GCGACGGCCAACTCAGAACTGG---CACGGACCAGGGGAATCCGACTGT 267
consensus_10404#3      GCGGTGCAG--ATATTTATGTAAATACACATAGATTTGTGTGTACGGGAGTGTAGATAGA 368
consensus_10404#1      GTTTTGTAG--AGTGTGCTATGTATTGGTGTTTA--TGTTTGGCTGATTG-ATGTGTATT 358
consensus_10404#4      CATGTTTACTCACAATTTTTAATTTTGGCTGTCTTTTGCCTACAATTCTTGTTGGTCCTT 352
consensus_10404#2      TTCTATGAAAAGAATAGGCTGAAATCATTTGAAGTTAATGAATGGGAGAACAGAGAAATA 379
                                                                                   

consensus_10404#0      TCGATGGGAACAGTGACACACGAAACCGTACGAGCTGTCTAGAGTGCTAACCGGTCCT-G 455
consensus_10404#7      ------------------------------------------------------------
consensus_10404#5      CTAATTAAAACAAAGCATTGCGATGTCCACTGATTGGTTTTGACGCAATGTGATTTCT-G 316
consensus_10404#6      CTAATTAAAACAAAGCATTGCGATGTCCACTGATTGGTTTTGACGCAAT----------- 316
consensus_10404#3      TGAGTGTATAGTGTATAGTGTGTGTGTGTGTGTTTGTGCGAGCGTGTTGATCTAGCAT-A 427
consensus_10404#1      TGAGTGTATAGTGTATAGTGTGTGTGTGTGTGTTTGTGCGAGCGTGTTGATCTAGCAT-A 417
consensus_10404#4      CTTATTCTTCATTTAAGCTTTTATCTTACGTGAAGGGTTCTTCGGTCATGTCCGACATTG 412
consensus_10404#2      AGAAACCCTTAAATATTACTCAATGACGTGATGGTGATTTCTGAGTTAAGTGACTTAT-C 438
                                                                                   

consensus_10404#0      CGATCTGCCTAGCCCAGCCAGTTAAGTCCAAAACACCAATAACAGCCTCTGTGGTATCAA 515
consensus_10404#7      ------------------------------------------------------------
consensus_10404#5      CCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAACCAAGCGCGGGTAAACGGCGG---- 372
consensus_10404#6      ------------------------------------------------------------
consensus_10404#3      AGTTATGTAGTGAATGTGTTTGTTAGTGGTAACTGTGGAGTTGGCGTGTAATGATGCCCT 487
consensus_10404#1      AATTATGTAGTGAATGTGTTTGTTGGTGGTAACTGTGGAGTTGGCGTGTAATGATGCCCT 477
consensus_10404#4      AATGATGAAATAGTTGAATAGAAGA----------------------------------- 437
consensus_10404#2      CATTCGGTGGAAAATGGACAACATGGTGCATCATGCAAAACTCA-GTACACCTTCAATTA 497
                                                                                   

consensus_10404#0      TCATTATTTACAAACATACTGGGTTTATATACCAACCAAACAGACCACATCGTACCATAA 575
consensus_10404#7      ------------------------------------------------------------
consensus_10404#5      ------------------------------------------------------------
consensus_10404#6      ------------------------------------------------------------
consensus_10404#3      TGCTGGGCAAAACACAG------------------------------------------- 504
consensus_10404#1      TGCTGGGCAAAACACAGTAAATGTATTGGACGGTGTTTAATCAGCTGGGCTAAGTAGATA 537
consensus_10404#4      ------------------------------------------------------------
consensus_10404#2      CTCTTCTATTTCAACACTGCATTTTTGGATTGAATGAAATTACTTTGAGTACAAAGAACA 557
                                                                                   

consensus_10404#0      AATGGAAAATAACATTTCTACAATATTTAGCCACATGTGGCTGTGAATAGGGGGAAAGTA 635
consensus_10404#7      ------------------------------------------------------------
consensus_10404#5      ------------------------------------------------------------
consensus_10404#6      ------------------------------------------------------------
consensus_10404#3      ------------------------------------------------------------
consensus_10404#1      GTGAGCTGTTTATTAATCACAGGTTGGTGTATATCACAACCTGNTTCATGTGCAGCTGAA 597
consensus_10404#4      ------------------------------------------------------------
consensus_10404#2      AGTGACAACTTTTTGGCAAGTGGAAACTGATGACTTTTAATAACTGTTC----------- 606
                                                                                   

consensus_10404#0      ATCAATAAACTGATGATAACTCAAGAATCGTATAATAATAGTTCAAAGGTCAAAATAAAG 695
consensus_10404#7      ------------------------------------------------------------
consensus_10404#5      ------------------------------------------------------------
consensus_10404#6      ------------------------------------------------------------
consensus_10404#3      ------------------------------------------------------------
consensus_10404#1      ATGTTATTTGTGATGTTACATGTGTATGTG------------------------------ 627
consensus_10404#4      ------------------------------------------------------------
consensus_10404#2      ------------------------------------------------------------
                                                                                   

consensus_10404#0      CTAATGATAAGAGGAACACGAATATGATTAGGTTAGTTACAATAGGAAATATACGTATTA 755
consensus_10404#7      ------------------------------------------------------------
consensus_10404#5      ------------------------------------------------------------
consensus_10404#6      ------------------------------------------------------------
consensus_10404#3      ------------------------------------------------------------
consensus_10404#1      ------------------------------------------------------------
consensus_10404#4      ------------------------------------------------------------
consensus_10404#2      ------------------------------------------------------------
                                                                                   

consensus_10404#0      CGTCGGCCAATAACTCCGCCTGTAGCTCTTCTAGAGTAC 794
consensus_10404#7      ---------------------------------------
consensus_10404#5      ---------------------------------------
consensus_10404#6      ---------------------------------------
consensus_10404#3      ---------------------------------------
consensus_10404#1      ---------------------------------------
consensus_10404#4      ---------------------------------------
consensus_10404#2      ---------------------------------------
                                                              




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)