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Schistosoma mansoni
cluster # 10437 cluster # 10437       Sequences # 16       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10437#0 length = 993 sequences # 3  
consensus_10437#1 length = 822 sequences # 4  
consensus_10437#2 length = 743 sequences # 4  
consensus_10437#3 length = 656 sequences # 1  
consensus_10437#4 length = 405 sequences # 4  

consensusID : consensus_10437#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 993
fasta sequence
                              [GTATCTATGTGGTTCCATTATACTAAATTACTTTTGTTTGTTCTTTTTAGCCTAACAAACGTAAACGAGATTTGAGCGTACCAAGCATAAATTTACATCGCAACGGTCATCTCTCAATGGACCTCGAAACAGTCGATACTAAAAAGTCGCGTGTCGACCGGTTGGAAGCATCACCTTCACGTGTTATACACATTCGAAATATGCCAGGAGATGCAACTGAAAACGAAATCGCCCTTTTTGCCATACCTTTTGGTCTTCTTAAAAACATGGTCCTTTCTAAAAGAAATAACCAAGCACTCATTGAAATGCATGTTTTGGAGGAAGCTGTGCAACTAGTTGCTCATTATTTAAAGTATCCTGTAACTTTACACGGGAAACACTTAATCTTTCAATTTTCTACACATTCCCATCTCGAACTAATTTCGGAAAACGACGCAATAGTTAATGCTATTAAGAATGCCAACCGTGTTGTTCAGCAAGATCTGCCGGGTGCTCAGACAGGTGTTCCTAACACTGTACTTCATGTGGTGATTGACAATATCATGGGCCAGCAAATCAACCACGTTATTTTGTATAAGATATTTCGTCGGTTTGGAACTATTTTACGTGTTTTAATTTTCTTACGTAACAACCAATATCGATGCTTGTTGGAGTTTCAAAACCATATTCAAGCGTTCGTCGCTATGTTAAAAGTATATCCAGATGCATTATTCACACTCTTCGGTAGGTTTATTTATTTATTCTCTCAAAAAATCAATTTTCCTATATTTCTGACTTTAAATGGCAATACAACCTCAGCTCACTGTTATCATTTCCGAGTTCAGTCGACACATTTTTAATAATTTTCTCGTAGTTTATTTGGTGTTTATGGTGATGTTACTCGAGTCAAAATAATGTTCAATAAAAAAAGTACTGCTCATGTGCAGTTTTCAGATCCACAACAAGCTCTCACAGCTTTGTATCATCTCAATGGCCAACCATTATATGGAAAAC]

[+] EMBL CD084257             [GTATCTATGTGGTTCCATTATACTAAATTACTTTTGTTTGTTCTTTTTAGCCTAACAAACGTAAACGAGATTTGAGCGTACCAAGCATAAATTTACATCGCAACGGTCATCTCTCAATGGACCTCGAAACAGTCGATACTAAAAAGTCGCGTGTCGACCGGTTGGAAGCATCACCTTCACGTGTTATACACATTCGAAATATGCCAGGAGATGCAACTGAAAACGAAATCGCCCTTTTTGCCATACCTTTTGGTCTTCTTAAAAACATGGTCCTTTCTAAAAGAAATAACCAAGCACTCATTGAAATGCATGTTTTGGAGGAAGCTGTGCAACTAGTTGCTCATTATTTAAAGTATCCTGTAACTTTACACGGGAAACACTTAATCTTTCAATTTTCTACACATTCCCATCTCGAACTAATTTCGGAAAACGACGCAATAGTTAATGCTATTAAGAATGCCAACCGTGTTGTTCAGCAAGATCTGCCGGGTGCTCAGACAGGTGTTCCTAACACTGTACTTCATGTGGTGATTGACAATATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD130406             [                                                                                                                                                                                                                                     CGCCCTTTTTGCCATACCTTTTGGTCTTCTTAAAAACATGGTCCTTTCTAAAAGAAATAACCAAGCACTCATTGAAATGCATGTTTTGGAGGAAGCTGTGCAACTAGTTGCTCATTATTTAAAGTATCCTGTAACTTTACACGGGAAACACTTAATCTTTCAATTTTCTACACATTCCCATCTCGAACTAATTTCGGAAAACGACGCAATAGTTAATGCTATTAAGAATGCCAACCGTGTTGTTCAGCAAGATCTGCCGGGTGCTCAGACAGGTGTTCCTAACACTGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD152443             [                                                                                                                                                                                                                                                                                                                                                                                                                                                               CTATTAAGAATGCCAACCGTGTTGTTCAGCAAGATCTGCCGGGTGCTCAGACAGGTGTTCCTAACACTGTACTTCATGTGGTGATTGACAATATCATGGGCCAGCAAATCAACCACGTTATTTTGTATAAGATATTTCGTCGGTTTGGAACTATTTTACGTGTTTTAATTTTCTTACGTAACAACCAATATCGATGCTTGTTGGAGTTTCAAAACCATATTCAAGCGTTCGTCGCTATGTTAAAAGTATATCCAGATGCATTATTCACACTCTTCGGTAGGTTTATTTATTTATTCTCTCAAAAAATCAATTTTCCTATATTTCTGACTTTAAATGGCAATACAACCTCAGCTCACTGTTATCATTTCCGAGTTCAGTCGACACATTTTTAATAATTTTCTCGTAGTTTATTTGGTGTTTATGGTGATGTTACTCGAGTCAAAATAATGTTCAATAAAAAAAGTACTGCTCATGTGCAGTTTTCAGATCCACAACAAGCTCTCACAGCTTTGTATCATCTCAATGGCCAACCATTATATGGAAAAC]


>consensus_10437#0 GTATCTATGTGGTTCCATTATACTAAATTACTTTTGTTTGTTCTTTTTAGCCTAACAAAC GTAAACGAGATTTGAGCGTACCAAGCATAAATTTACATCGCAACGGTCATCTCTCAATGG ACCTCGAAACAGTCGATACTAAAAAGTCGCGTGTCGACCGGTTGGAAGCATCACCTTCAC GTGTTATACACATTCGAAATATGCCAGGAGATGCAACTGAAAACGAAATCGCCCTTTTTG CCATACCTTTTGGTCTTCTTAAAAACATGGTCCTTTCTAAAAGAAATAACCAAGCACTCA TTGAAATGCATGTTTTGGAGGAAGCTGTGCAACTAGTTGCTCATTATTTAAAGTATCCTG TAACTTTACACGGGAAACACTTAATCTTTCAATTTTCTACACATTCCCATCTCGAACTAA TTTCGGAAAACGACGCAATAGTTAATGCTATTAAGAATGCCAACCGTGTTGTTCAGCAAG ATCTGCCGGGTGCTCAGACAGGTGTTCCTAACACTGTACTTCATGTGGTGATTGACAATA TCATGGGCCAGCAAATCAACCACGTTATTTTGTATAAGATATTTCGTCGGTTTGGAACTA TTTTACGTGTTTTAATTTTCTTACGTAACAACCAATATCGATGCTTGTTGGAGTTTCAAA ACCATATTCAAGCGTTCGTCGCTATGTTAAAAGTATATCCAGATGCATTATTCACACTCT TCGGTAGGTTTATTTATTTATTCTCTCAAAAAATCAATTTTCCTATATTTCTGACTTTAA ATGGCAATACAACCTCAGCTCACTGTTATCATTTCCGAGTTCAGTCGACACATTTTTAAT AATTTTCTCGTAGTTTATTTGGTGTTTATGGTGATGTTACTCGAGTCAAAATAATGTTCA ATAAAAAAAGTACTGCTCATGTGCAGTTTTCAGATCCACAACAAGCTCTCACAGCTTTGT ATCATCTCAATGGCCAACCATTATATGGAAAAC



consensusID : consensus_10437#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 822
fasta sequence
                              [ATCCAAATGCATTATCCCCCCTTTCCGGGGTTAAGGGT-ATGTTACTCGAGTCAAAATAATGTTCAATAAAAAAAGTACTGCTCTTGTGCAGTTTTCAGATCCACAACAAGCTCTCACAGCTTTGTATCATCTCAATGGCCAACCATTATATGGAAAACCTTTAAAAATAGCTGTTTCACGCTTCAACATTGTCCAGTTGCCAAAAGAAGATAATGATGTCGGACTTACTAAAGACTATACCAATAGTCCGCTTCATCGTTTTAGAAAGCCGAATTCTAAGAATTTCACTAACATTTATGCTCATAATCACGTTTTGCATTTAAGTAATATACCCTCTGCTATCACAGAAGAAGAGGTTAGAATGATTTTTGAAACCAAAGGATATCATGTTACAGACTTCAAGTTTATGATGAAAGATAAAAAGATGGCATTAATCCAACTGGAAAACGTTGATATGGCTATCCAAGCCTTGATTGACCTTCACAACTGTCAGCTAACAGAAAATTCCCATTTGCGTATCAGTTTCAGTAAAACAGCTATATAAATGAATAATCTATCTAACCAGTTTGTTTGCTTTTCTCTGATTTCGATTTCTGGTACATAAACTTTCATATTTTAGCAAGTTTTTTTCTTATTTCGTTTAATCTTTTGTGACAGTCTCATAAGTCCTTATGTTATGCTATACTTGTTCATCCCTGTCAAATGTTAACCTCTCAATTTTACCTACGAAACAGGATTCAAATGTAAGATCAACGCAAAGGTAGAGTTTATTGAACGAAGTCCACACTGTTAATAATTTTCACTAATCTCAATTTACATAAG]

[-] EMBL CD135851             [ATCCAAATGCATTATCCCCCCTTTCCGGGGTTAAGGGT ATGTTACTCGAGTCAAAATAATGTTCAATAAAAAAAGTACTGCTCTTGTGCAGTTTTCAGATCCACAACAAGCTCTCACAGCTTTGTATCATCTCAATGGCCAACCATTATATGGAAAACCTTTAAAAATAGCTGTTTCACGCTTCAACATTGTCCAGTTGCCAAAAGAAGATAATGATGTCGGACTTACTAAAGACTATACCAATAGTCCGCTTCATCGTTTTAGAAAGCCGAATTCTAAGAATTTCACTAACATTTATGCTCATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD135858             [  tCAGATGCATTATTCACACTCTTCGGTGTTTATGGTGATGTTACTCGAGTCAAAATAATGTTCAATAAAAAAAGTACTGCTCTTGTGCAGTTTTCAGATCCACAACAAGCTCTCACAGCTTTGTATCATCTCAATGGCCAACCATTATATGGAAAACCTTTAAAAATAGCTGTTTCACGCTTCAACATTGTCCAGTTGCCAAAAGAAGATAATGATGTCGGACTTACTAAAGACTATACCAATAGTCCGCTTCATCGATTTACAAAGCCGAATTCTAAGAATTTCACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD074520             [                                                                                                                                                       TGG AAACC TTAAAAA AGCTG TTCACGCTTCAACA TGTCCAG TGCCAAAAGAAGATAATGATGTCGGACTTACTAAAGACTATACCAATAGTCCGCTTCATCGTTTTAGAAAGCCGAATTCTAAGAATTTCACTAACATTTATGCTCCCAATCACGTTTTGCATTTAAGTAATATACCCTCTGCTATCACAGAAGAAGAGGTTAGAATGATTTTTGAAACCAAAGGATATCATGTTACAGACTTCAAGTTTATGATGAAAGATAAAAAGATGGCATTAATCCAACTGGAAAACGTTGATATGGCTATCCAAGCCTTGATTGACCTTCACAACTGTCAGCTAACAGAAAATTCCCATTTGCGTATCAGTTTCAGTAAAACAGCTATATAAATGAATAATCTATCTAACCAGTTTGTTTGCTTTTCTCTGATTTCGATTTCTGGTACATAAACTTTCATATTTTAGCAAGTTTTTTTCTTATTTCGTTTAATCTTTTGTGACAGTCTCATAAGTCCTTATGTTATGCTATACTTGTTCATCCCTGTCAAATGTTAACCTCTCAATTTTACCTACGAAACAGGATTCAAATGTAAGATCAACGCAAAGGTAGAGTTTATTGAACGAAGTCCACACTGTTAATAATTTTCACTAATCTCAATTTACATAAG]
[-] EMBL CD074341             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GATTTCTGGTACATAAACTTTCATATTTTAGCAAGTTTTTTTCTTATTTCGTTTAATCTTTTGTGACAGTCTCATAAGTCCTTATGTTATGCTATACTTGTTCATCCCTGTCAAATGTTAACCTCTCAATTTTACCTACGAAACAGGATTCAAATGTAAGATCAACGCAAAGGTAGAGTTTATTGAACGAAGTCCACACTGTTAATAATTTTCACTAATCTCAATTTACATAAG]


>consensus_10437#1 ATCCAAATGCATTATCCCCCCTTTCCGGGGTTAAGGGTATGTTACTCGAGTCAAAATAAT GTTCAATAAAAAAAGTACTGCTCTTGTGCAGTTTTCAGATCCACAACAAGCTCTCACAGC TTTGTATCATCTCAATGGCCAACCATTATATGGAAAACCTTTAAAAATAGCTGTTTCACG CTTCAACATTGTCCAGTTGCCAAAAGAAGATAATGATGTCGGACTTACTAAAGACTATAC CAATAGTCCGCTTCATCGTTTTAGAAAGCCGAATTCTAAGAATTTCACTAACATTTATGC TCATAATCACGTTTTGCATTTAAGTAATATACCCTCTGCTATCACAGAAGAAGAGGTTAG AATGATTTTTGAAACCAAAGGATATCATGTTACAGACTTCAAGTTTATGATGAAAGATAA AAAGATGGCATTAATCCAACTGGAAAACGTTGATATGGCTATCCAAGCCTTGATTGACCT TCACAACTGTCAGCTAACAGAAAATTCCCATTTGCGTATCAGTTTCAGTAAAACAGCTAT ATAAATGAATAATCTATCTAACCAGTTTGTTTGCTTTTCTCTGATTTCGATTTCTGGTAC ATAAACTTTCATATTTTAGCAAGTTTTTTTCTTATTTCGTTTAATCTTTTGTGACAGTCT CATAAGTCCTTATGTTATGCTATACTTGTTCATCCCTGTCAAATGTTAACCTCTCAATTT TACCTACGAAACAGGATTCAAATGTAAGATCAACGCAAAGGTAGAGTTTATTGAACGAAG TCCACACTGTTAATAATTTTCACTAATCTCAATTTACATAAG



consensusID : consensus_10437#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 743
fasta sequence
                              [AGAGGTGATATAGTATAATCACGGCATTTATCATTCTCGCGACGAACTTCCAAAGGTCCTCTGGCTTTCCAAAATTCCACTTGGAAACTATTAACACAGTGCTAGCTCCAGTTTGACCCAAGTTAGACACAGATTGATTAATCAAGTTCGGCAAAAGCTGTGTTTGGTTTTGTACAGTTGGTAAAGCTGCACGAGGACCTTGCAGAGATGCAGCATTTAAAACAGTTCCTGGAGTCGGGTTTATGGCAGAATTCCCACCTTGCGCAGTCAAAGCCATGAAACTGGCAGTAGCTGCGGCTGCAGCAGGGGTCAATGCAAGACCAGATTGTTGAGCAAGCAACGTTAGCTGAATAGCAAGATCATTGATACCTGACGCTGCAGCTTGGGGGACAGCGGTGAAAGCTGCCGTCGGGTTACCTAGTGGTATATTTTGCCCGATAGAAGGTTGAGAAATTGAATTGATGGTTGAATTATTTGTCGACGCAGTCACTCCACCAGGAAGTGCTTGTATACTGTTGCATCTC-TCATCCGTTAGAGGTGATATAGTATAATCACGGCATTTATCATTCTCGCGACGAGCTTCCAAAGGTCCTCTGGCTTTCCAAAATTCCACTTGAAGAGAACAACAACCCGTATAAATATTCTGACCGTTTAGAAGTAACATAGCGACGAACGCTTGAATATGGTTTTGAAACTCCAACAAGCATCGATATTGGTTGTTACGTAAGAAAATTAAAACACGT]

[-] EMBL CD186236             [AGAGGTGATATAGTATAATCACGGCATTTATCATTCTCGCGACGAACTTCCAAAGGTCCTCTGGCTTTCCAAAATTCCACTTGGAAACTATTAACACAGTGCTAGCTCCAGTTTGACCCAAGTTAGACACAGATTGATTAATCAAGTTCGGCAAAAGCTGTGTTTGGTTTTGTACAGTTGGTAAAGCTGCACGAGGACCTTGCAGAGATGCAGCATTTAAAACAGTTCCTGGAGTCGGGTTTATGGCAGAATTCCCACCTTGCGCAGTCAAAGCCATGAAACTGGCAGTAGCTGCGGCTGCAGCAGGGGTCAATGCAAGACCAGATTGTTGAGCAAGCAACGTTAGCTGAATAGCAAGATCATTGATACCTGACGCTGCAGCTTGGGGGACAGCGGTGAAAGCTGCCGTCGGGTTACCTAGTGGTATATTTTGCCCGATAGAAGGTTGAGAAATTGAATTGATGGTTGAATTATTTGTCGAC                                                                                                                                                                                                                                                                      ]
[+] EMBL CD134448             [                                                                                                                                                                                                                                                TTATGGCAGAATTCCCACCTTGCGCAGGGAGGGGCATGAAACTGGCAGTAGCTGCGGCTGCAGCAGGGGTCAATGCAAGACCAGATTGTTGAGCAAGCAACGTTAGCTGAATAGCAAGATCATTGATACCTGACGCTGCAGCTTGGGGGACAGCGGTGAAAGCTGGCGTCGGGTTACCGGGGGGTATATTTTGGCCGATAGAAGGTTGAGAAATTGAATTGATGGTTGAATTATTTGTCGACGCAGTCACTCCACCAGGAAGTGCTTGTATACTGTTGCATCTC T                                                                                                                                                                                                                          ]
[+] EMBL BG932434             [                                                                                                                                                                                                                                                                       GCAGTCAAAGCCATGAAACTGGCAGTAGCTGCGGCTGCAGCAGGGGTCAATGCATGACCAGATTGCTGAGCAAGCAACGCTAGCTGAATAGCAAGATCATTGATACCTGACGCTGCACTTTGGGGGACAGCGGTGAAAGCTGCCGTCGTATTACCTAGTGGTATATTTCGCCCGATAGAAGGTTGAGAAATTGAATTGATGGTTGAATTATTTGTCGACGCAGTCACT                                                                                                                                                                                                                                                             ]
[+] EMBL CD122858             [                                                                                                                                                                                                                                                                                                                                                                                                                                         ATATTTTGCCCGATAGAAGGTTGAGAAATTGAATTGATGGTTGAATTATTTGTCGACGCAGTCACTCCACCAGGAAGTGCTTGTAAACTGTTG AGTTCATCATCCGTTAGAGGTGATATAGTATAATCACGGCATTTATCATTCTCGCGACGAGCTTCCAAAGGTCCTCTGGCTTTCCAAAATTCCACTTGAAGAGAACAACAACCCGTATAAATATTCTGACCGTTTAGAAGTAACATAGCGACGAACGCTTGAATATGGTTTTGAAACTCCAACAAGCATCGATATTGGTTGTTACGTAAGAAAATTAAAACACGT]


>consensus_10437#2 AGAGGTGATATAGTATAATCACGGCATTTATCATTCTCGCGACGAACTTCCAAAGGTCCT CTGGCTTTCCAAAATTCCACTTGGAAACTATTAACACAGTGCTAGCTCCAGTTTGACCCA AGTTAGACACAGATTGATTAATCAAGTTCGGCAAAAGCTGTGTTTGGTTTTGTACAGTTG GTAAAGCTGCACGAGGACCTTGCAGAGATGCAGCATTTAAAACAGTTCCTGGAGTCGGGT TTATGGCAGAATTCCCACCTTGCGCAGTCAAAGCCATGAAACTGGCAGTAGCTGCGGCTG CAGCAGGGGTCAATGCAAGACCAGATTGTTGAGCAAGCAACGTTAGCTGAATAGCAAGAT CATTGATACCTGACGCTGCAGCTTGGGGGACAGCGGTGAAAGCTGCCGTCGGGTTACCTA GTGGTATATTTTGCCCGATAGAAGGTTGAGAAATTGAATTGATGGTTGAATTATTTGTCG ACGCAGTCACTCCACCAGGAAGTGCTTGTATACTGTTGCATCTCTCATCCGTTAGAGGTG ATATAGTATAATCACGGCATTTATCATTCTCGCGACGAGCTTCCAAAGGTCCTCTGGCTT TCCAAAATTCCACTTGAAGAGAACAACAACCCGTATAAATATTCTGACCGTTTAGAAGTA ACATAGCGACGAACGCTTGAATATGGTTTTGAAACTCCAACAAGCATCGATATTGGTTGT TACGTAAGAAAATTAAAACACGT



consensusID : consensus_10437#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 656
fasta sequence
                              [GGTATCAATGATCTTGCTATTCAGCTAACGTTGCTTGCTCAACAATCTGGGCTTGCATTGACCCCTGCTGCAGCCGCAGCTACTGCCAGTTTCATGGCTTTGACTGCGCAAGGTGGGAATTCTGCCATAAACCCGACTCCAGGAACTGTTTTAAATGCTGCATCTCTGCAAGGTCCTCGTGCAGCTTTACCAACTGTACAAAACCAAACACAGCTTTTGCCGAACTTGATTAATCAATCTGTGTCTAACTTGGGTCAAACTGGAGCTAGCACTGTGTTAATAGTTTCCAATCTCAATGAGGAGGTACGTATTCATTGTTCTTCTTAGATTTTAGTCTTCAATTTTCTTTTTCCATTTAAATTTCCCTACAGATTATTTGATAAAGTTTTAAATTCACTCTTACTCTATCCTTTATTGTTATTATTGCTTTGTTCATTGTGATAAAGCTTATTGTTCGCAATTATTTTTAACTTATTGCGTTTATTTTTTCCTTTTTCCTCTCCGTAATCTATCATTTGATTCCAATGTGACTGACTACAATTCGACTTCACTGTGATGTGGTGCTTAATCCACTTGTGAAACGGTACAATTTATCTTCGCTGTACAATCAACAACTCAATGTTTCANTGTTGGTATCTACACAAACTTAAAATGCA]

[+] EMBL CD080428             [GGTATCAATGATCTTGCTATTCAGCTAACGTTGCTTGCTCAACAATCTGGGCTTGCATTGACCCCTGCTGCAGCCGCAGCTACTGCCAGTTTCATGGCTTTGACTGCGCAAGGTGGGAATTCTGCCATAAACCCGACTCCAGGAACTGTTTTAAATGCTGCATCTCTGCAAGGTCCTCGTGCAGCTTTACCAACTGTACAAAACCAAACACAGCTTTTGCCGAACTTGATTAATCAATCTGTGTCTAACTTGGGTCAAACTGGAGCTAGCACTGTGTTAATAGTTTCCAATCTCAATGAGGAGGTACGTATTCATTGTTCTTCTTAGATTTTAGTCTTCAATTTTCTTTTTCCATTTAAATTTCCCTACAGATTATTTGATAAAGTTTTAAATTCACTCTTACTCTATCCTTTATTGTTATTATTGCTTTGTTCATTGTGATAAAGCTTATTGTTCGCAATTATTTTTAACTTATTGCGTTTATTTTTTCCTTTTTCCTCTCCGTAATCTATCATTTGATTCCAATGTGACTGACTACAATTCGACTTCACTGTGATGTGGTGCTTAATCCACTTGTGAAACGGTACAATTTATCTTCGCTGTACAATCAACAACTCAATGTTTCANTGTTGGTATCTACACAAACTTAAAATGCA]


>consensus_10437#3 GGTATCAATGATCTTGCTATTCAGCTAACGTTGCTTGCTCAACAATCTGGGCTTGCATTG ACCCCTGCTGCAGCCGCAGCTACTGCCAGTTTCATGGCTTTGACTGCGCAAGGTGGGAAT TCTGCCATAAACCCGACTCCAGGAACTGTTTTAAATGCTGCATCTCTGCAAGGTCCTCGT GCAGCTTTACCAACTGTACAAAACCAAACACAGCTTTTGCCGAACTTGATTAATCAATCT GTGTCTAACTTGGGTCAAACTGGAGCTAGCACTGTGTTAATAGTTTCCAATCTCAATGAG GAGGTACGTATTCATTGTTCTTCTTAGATTTTAGTCTTCAATTTTCTTTTTCCATTTAAA TTTCCCTACAGATTATTTGATAAAGTTTTAAATTCACTCTTACTCTATCCTTTATTGTTA TTATTGCTTTGTTCATTGTGATAAAGCTTATTGTTCGCAATTATTTTTAACTTATTGCGT TTATTTTTTCCTTTTTCCTCTCCGTAATCTATCATTTGATTCCAATGTGACTGACTACAA TTCGACTTCACTGTGATGTGGTGCTTAATCCACTTGTGAAACGGTACAATTTATCTTCGC TGTACAATCAACAACTCAATGTTTCANTGTTGGTATCTACACAAACTTAAAATGCA



consensusID : consensus_10437#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 405
fasta sequence
                              [TTTTTTTTTTTTTTTTTTTTTTTTTTTAAAATATGAAAGTTTATGTACCAGAAATCGAAATCAG-AGAAAAGCAAACAAACTGGTTAGATAGATTATTCATTTATATAGCTGTTTTACTGAAACTGATACGCAAATGGGAATTTTCTGTTAGCTGACAGTTGTGAAGGTCAATCAAGGCTTGGATAGCCATATCAACGTTTTCCAGTTGGATTAATGCCATCTTTTTATCTTTCATCATAAACTTGAAGTCTGTAACATGATATCCTTTGGTTTCAAAAATCATTCTAACCTCTTCTTCTGTGATAGCAGAGGGTATATTACTTAAATGCAAAACGTGATTGGGAGCATAAATGTTAGTGAAATTCCTAGAATTCGGCTTTCTAAAACGATGAAACGGACTATTGG]

[+] EMBL AI395290             [TTTTTTTTTTTTTTTTTTTTTTTTTTTAAAATATGAAAGTTTATGTACCAGAAATCGAAATCAG AGAAAAGCAAACAAACTGGTTAGATAGATTATTCATTTATATAGCTGTTTTACTGAAACTGATACGCAAATGGGAATTTTCTGTTAGCTGACAGTTGTGAAGGTCAATCAAGGCTTGGATAGCCATATCAACGTTTTCCAGTTGGATTAATGCCATCTTTTTATCTTTCATCATAAACTTGAAGTCTGTAACATGATATCCTTTGGTTTCAAAAATCATTCTAACCTCTTCTTCTGTGATAGCAGAGGGTATATTACTTAAATGCAAAACGTGATTGGGAGCATAAATGTTAGTGAAATTCCTAGAATTCGGCTTTCTAAAACGATGAAACGGACTATTGG]
[+] EMBL AA999359             [                                    AAGTTTATGTACCAGAAATCGAAATCAG AGAAAAGCAAACAAACTGGTTAGATAGATTATTCATTTATATAGCTGTTTTACTGAAACTGATACGCAAATGGGAATTTTCTGTTAGCTGACAGTTGTGAAGGTCAATCAAGGCTTGGATAGCCATATCAACGTTTTCCAGTTGGATTAATGCC                                                                                                                                                                                           ]
[+] EMBL CD152903             [                                                            nCAGNANAAAAGCAAACAAACTGGTTAGATAGATTATTCATTTATATAGCTGTTTTACTGAAACTGATTCTCTAATGGGAATTTTCTGTTAGCTGACAGTTGTGAAGGTCAATCAAGGTTTGTTTTGCCATAT                                                                                                                                                                                                                     ]
[+] EMBL CD181309             [                                                                                                                                        GGGAATTTTCTGTTAGCTGACAGTTGTGAAGGTCAATCAAGGCTTGGATAGCCATATCAACGTTTTCCAGTTGGATTAATGCCATCTTTTTATCTTTCATCATAAACTTGAAGTCTGTAACATGATATCCTTTGGTTTCAAAAAT                                                                                                                             ]


>consensus_10437#4 TTTTTTTTTTTTTTTTTTTTTTTTTTTAAAATATGAAAGTTTATGTACCAGAAATCGAAA TCAGAGAAAAGCAAACAAACTGGTTAGATAGATTATTCATTTATATAGCTGTTTTACTGA AACTGATACGCAAATGGGAATTTTCTGTTAGCTGACAGTTGTGAAGGTCAATCAAGGCTT GGATAGCCATATCAACGTTTTCCAGTTGGATTAATGCCATCTTTTTATCTTTCATCATAA ACTTGAAGTCTGTAACATGATATCCTTTGGTTTCAAAAATCATTCTAACCTCTTCTTCTG TGATAGCAGAGGGTATATTACTTAAATGCAAAACGTGATTGGGAGCATAAATGTTAGTGA AATTCCTAGAATTCGGCTTTCTAAAACGATGAAACGGACTATTGG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10437#0      --GTATCTATGTGGTTCCATTATACTAAATTACTTTTGTTTGTTCTTTTTAGCCTAACAA 58
consensus_10437#1      ATCCAAATGCATTATCCCCCCTTTCCGGGGT-TAAGGGTATGTTACTCGAGTCAAAATAA 59
consensus_10437#3      ------------------------------------------------------------
consensus_10437#4      ------------------------------------------------------------
consensus_10437#2      ------------------------------------------------------------
                                                                                   

consensus_10437#0      ACGTAAACGAGATTTGAGCGTACCAAGCATAAATTTACATCGCAACGGTCATCTCTCAAT 118
consensus_10437#1      TGTTCAATAAAAAAAGTACTGCTCTTGTGCAG-TTTTCAGATCCACAACAAGCTCTCA-- 116
consensus_10437#3      ------------------------------------------------------------
consensus_10437#4      ------------------------------------------------------------
consensus_10437#2      -------------------------------------AGAGGTGATATAGTATAATCACG 23
                                                                                   

consensus_10437#0      GGACCTCGAAACAG-TCGATACTAAAAAGTCGCGTGTCGACCGGTTGGAAGCATCACCTT 177
consensus_10437#1      CAGCTTTGTATCATCTCAATGGCCAACCATTATATGGAAAACCTTTAAAAATAGCTGTTT 176
consensus_10437#3      ---------------------GGTATCAATGATCTTGCTATTCAGCTAACGTTGCTTGCT 39
consensus_10437#4      ------------------------------------------------------------
consensus_10437#2      GCATTTATCATTCTCGCGACGAACTTCCAAAGGTCCTCTGGCTTTCCAAAATTCCACTTG 83
                                                                                   

consensus_10437#0      CACGTGTTATACACATTCGAAATATGCCAGGAGATGCAACTGAAAACGAAATCGCCCTTT 237
consensus_10437#1      CACGCTTCA---ACATTGTCCAGTTGCCAAAAGAAGATAATGATGTCGGACTTAC--TAA 231
consensus_10437#3      CA----------ACAATCTGGGCTTGC-ATTGACCCCTGCTGCAGCCGCAGCTACTGCCA 88
consensus_10437#4      ------------------------------------------------------------
consensus_10437#2      GAAACTATTAACACAGTGCTAGCTCCAGTTTGACCCAAGTTAGACACAGATTGA---TTA 140
                                                                                   

consensus_10437#0      TTGCCATACCTTTTGGTCTTCTTAAAAACATGGTCCTTTCTAAAAGAAATAACCAAGCAC 297
consensus_10437#1      AGACTATACCAAT-AGTCCGCTT-----CATCGT--TTTAGAAAGCCGAATTCTAAGAAT 283
consensus_10437#3      GTTTCATGGCTTT--GACTGCGCAAGGTGGGAATTCTGCCATAAACCCGACTCCAGGAAC 146
consensus_10437#4      ------------------------------------------------------------
consensus_10437#2      ATCAAGTTCGGCAAAAGCTGTGT----TTGGTTTTGTACAGTTGGTAAAGCTGCACGAGG 196
                                                                                   

consensus_10437#0      T-CATTGAAA--TGCATGTTTTGGAGGAAGCTGTGCAACTAG--TTGCTCATTATTTAAA 352
consensus_10437#1      TTCACTAACA--TTTATGCTCATAATCACGTTTTGCATTTAA--GTAAT-ATACCCTCTG 338
consensus_10437#3      TGTTTTAAATGCTGCATCTCTGCAAGGTCCTCGTGCAGCT----TTACCAACTGTACAAA 202
consensus_10437#4      ------------------------------------------------------------
consensus_10437#2      ACCTTGCAGAGATGCAGCATTTAAAACAGTTCCTGGAGTCGGGTTTATGGCAGAATTCCC 256
                                                                                   

consensus_10437#0      GTATCCTGTAACTTTACACGGGAAACACTTAATCTTTCAATTTTCTACACATTCCC-ATC 411
consensus_10437#1      CTATCACAGAAGAAGAGGTTAGAATGATTTTTGAAACCAAAGGATATCATGTTACAGACT 398
consensus_10437#3      ACCAAACACAGCTTT-TGCCGAACTTGATTAATCAATCTGTGTCTAACTTGGGTCA-AAC 260
consensus_10437#4      -----------TTTTTTTTTTTTTTTTTTTTTTTTTTTAAAATATGAAAGTTTATGTACC 49
consensus_10437#2      ACCTTGCGCAGTCAAAGCCATGAAACTGGCAGTAGCTGCGGCTGCAGCAGGGGTCAATGC 316
                                                                                   

consensus_10437#0      TCGAACTAATTTCGGAAAACGACGCAATAG--TTAATGCTATTAAGAATGCCAACCGTGT 469
consensus_10437#1      TCAAGTTTATGATGAAAGATAAAAAGATGGCATTAATCCAACTGGAAA--ACGTTGATAT 456
consensus_10437#3      TGGAGCTAGCACTGTGTTAATAGTTTCCAATCTCAATG-----AGGAGGTACGTATTCAT 315
consensus_10437#4      AGAAATCGAAATCAGAGAAAAGCAAACAAA--CTGGTTAGA-TAGATTATTCATTTATAT 106
consensus_10437#2      AAGACCAGATTGTTGAGCAAGCAACGTTAGC-TGAATAGCA--AGATCATTGATACCTGA 373
                          *              *                 *                       

consensus_10437#0      TGTTCAGCAAGATCTGCCGGGTGCTCAGACAGGTGTTC-CTAACACTGTACTTCATGTGG 528
consensus_10437#1      GGCTATCCAAGCCTTGATTGACCTTCA--CAACTGTCAGCTAACAGAAAATTCCCATTTG 514
consensus_10437#3      TGTTCTTCTTAGATT--TTAGTCTTCA----ATTTTCTTTTTCCATTTAAATTTCCCTAC 369
consensus_10437#4      AGCTGTTTTA-CTGAAACTGATACGCA----AATGGGAATTTTCTGTTAGCTGACAGTTG 161
consensus_10437#2      CGCTGCAGCTTGGGGGACAGCGGTGAAAGCTGCCGTCGGGTTACCTAGTGGTATATTTTG 433
                        * *                      *             *  *       *     *  

consensus_10437#0      TGATTGACAATATCATGGGCC-AGCAAATCAACCACGTTATTTTGTATAAGATATTTCGT 587
consensus_10437#1      CG--------TATCA-GTTTC-AGTAAAACAGCTATATAAAT--GAATAATCTATCTAAC 562
consensus_10437#3      AG---------ATTATTTGAT-AAAGTTTTAAATTCACTCTTA-CTCTATCCTTTATTGT 418
consensus_10437#4      TGA------AGGTCAATCAAG-GCTTGGATAGCCATATCAACGTTTTCCAGTTGGATTAA 214
consensus_10437#2      CCCGATAGAAGGTTGAGAAATTGAATTGATGGTTGAATTATTT-GTCGACGCAGTCACTC 492
                                   *                                               

consensus_10437#0      CGGTTTGGAACTATTTTACGTGTTTTAATTTTCT-TACGTAACAACCAATATCGATGCTT 646
consensus_10437#1      CAGTTTGTTTGCTTTTCTCTGATTTCGATTTCTGGTACATAAACTTTCATATTTTAGCAA 622
consensus_10437#3      TATTATTGCTTTGTTCATTGTGATAAAGCTTATTGTTCGCAATTATTTTTAACTTATTGC 478
consensus_10437#4      TGCCATCTTTTTATCTTTCATCATA-AACTTGAAGTCTGTAACATGATATCCTTTGGTTT 273
consensus_10437#2      CACCAGGAAGTGCTTGTATACTGTTGCATCTCTCATCCGTTAGAGGTGATATAGTATAAT 552
                                    *         *      *    *     *       *          

consensus_10437#0      GTTGGAGTTTCAAAACCATAT-TCAAGCGTTCGTCGCTATGTTAAAAGTATATCCAGATG 705
consensus_10437#1      GTTT---TTTTCTTATTTCGT-TTAATCTTTTGTGACAGTCTCATAAGT-CCTTATGTTA 677
consensus_10437#3      GTTTATTTTTTCCTTTTTCCTCTCCGTAATCTATCATTTGATTCCAA-TGTGACTGACTA 537
consensus_10437#4      CAAAAATCATTCTAACCTCTT------CTTCTGTGATAGCAGAGGGTATATTACTTAA-A 326
consensus_10437#2      CACGGCATTTATCATTCTCGCGACGAGCTTCCA--AAGGTCCTCTGGCTTTCCAAAATTC 610
                                *                   *                  *           

consensus_10437#0      CATTATTCACACTCTTCGGTAGGTTTAT-TTATTTATTCTCTCAAAAAATCAATTTTCCT 764
consensus_10437#1      TGCTATACTTGTTCATCCCT--GTCAAA-T--GTTAACCTCTCAAT-------TTTACCT 725
consensus_10437#3      CAATTCGACTTCACTGTGATGTGGTGCT-TAATCCACTTGTGAAACGGTACAATTTATCT 596
consensus_10437#4      TGCAAAACGTGATTGGGAGCATAAATGT-TAGTGAAATTCCTAGAA-------TTCGGCT 378
consensus_10437#2      CACTTGAAGAGAACAACAACCCGTATAAATATTCTGACCGTTTAGAAG-----TAACATA 665
                                                    *                       *      

consensus_10437#0      ATATTTCTGACTTTAAATGGCAATACAACCTCAGCTCACTGTTATCATTT-C-CGAGTTC 822
consensus_10437#1      ACGAAACAGGATTCAAATG------TAAGATCAACGCAAAGGTAGAGTTTAT-TGAACGA 778
consensus_10437#3      TCGCTGTACAATCAACAACT-----CAATGTT---TCANTGTTGGTATCTACACAAACTT 648
consensus_10437#4      TTCTAAAACGATGAAACGG-------ACTATTGG-------------------------- 405
consensus_10437#2      GCGACGAACGCTTGAATATGGTTTTGAAACTCCAACAAGCATCGATATTGGTTGTTACGT 725
                                  *  *           *   *                             

consensus_10437#0      AGTCGACACATTTTTAATAATTTTCTCGTAGTTTATTTGGTGTTTATGGTGATGTTACTC 882
consensus_10437#1      AGTC--CACACTGTTAATAATTTTCACTAATCTCAATTTACATAAG-------------- 822
consensus_10437#3      AAAATGCA---------------------------------------------------- 656
consensus_10437#4      ------------------------------------------------------------
consensus_10437#2      AAGAAAATTAAAACACGT------------------------------------------ 743
                                                                                   

consensus_10437#0      GAGTCAAAATAATGTTCAATAAAAAAAGTACTGCTCATGTGCAGTTTTCAGATCCACAAC 942
consensus_10437#1      ------------------------------------------------------------
consensus_10437#3      ------------------------------------------------------------
consensus_10437#4      ------------------------------------------------------------
consensus_10437#2      ------------------------------------------------------------
                                                                                   

consensus_10437#0      AAGCTCTCACAGCTTTGTATCATCTCAATGGCCAACCATTATATGGAAAAC 993
consensus_10437#1      ---------------------------------------------------
consensus_10437#3      ---------------------------------------------------
consensus_10437#4      ---------------------------------------------------
consensus_10437#2      ---------------------------------------------------
                                                                          




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)