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Schistosoma mansoni
cluster # 10448 cluster # 10448       Sequences # 16       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10448#0 length = 1212 sequences # 10  
consensus_10448#1 length = 784 sequences # 4  
consensus_10448#2 length = 447 sequences # 2  

consensusID : consensus_10448#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1212
fasta sequence
                              [CAAGTCGCCAAGGCCACTTTCCCGTACGTCTGAGCGTACCTTCTTATTGAATAACCAAATGAATCCTAATTATCCTAATGGTCACATAGGATAT-GGATGG-GAATTTGGTCAAAATGCTACTACTACTTCACGGTGGGAACAACCACAAATTGGATTCTGCTTCGATTCACCAAATCTTCAAATCCCTGAAGTTTGTCCACCTCCCATTCAAAACACCGGGGTTATTGGCTTCGCTTACGATCAGGGGGTAGCAAATCCAGCTTCAGCGTCCTCAGTATCCCCCAATCGTCCACAATCCAACTCATCTACATGCAGCACCTTTAATGTTACACCGTCAAGACCAAATGTTCCCCCACCCATCA-AACCCATGCAACCAGAATCATACGTTGATTATTCGAATGAGTCATTTGCACCATCCGCTCCTCCTGAATCCGTTCCCCTTTCTCATAGTGAATCAGTGAAAGTTATTACAATCACTAGGATGGATTCAAAAAAATCCGGCACAACATCTACAACTACTAATACTAATACTAATACTAATCAGCACAATCAACGACGTGACAGTTATCAAGATTCACTAAAAGATATGGCTGCTCTTATGACTGATGTAGAATTAACAGATGATATGATCAATGGTATGCGTAAACGTTTCGATTTAAAGAACTGATGACACTAAACTCTTCTTCAATCAATAGTTCGGTTCATATTCCTATCAAATGACTTGAAAAACAAAATTCTCCTATTGAAAGTGTAGATTACTTTCTGTTTATAATAACAATCATCATTGATTTTGC-TC--TTTTTGTTTTACAATGCTGTCACATCAATTAATGTCCATGATAATCCATGATAAAGTTGC-TTTTCCCCCTCCCCATCAATTAACTTTGTTTATTTATTTATTTTGTTATTGTTTACTTTGATTATTGATTGTTTATCCTTAGTTTGCCAATAGAGAAATCAAGTATTATGTATTTAATAACATTTTTTTGCTTGTGAAACAAATAGACTGGCGTTTCAACTTGATTCCCAACTTTTTCCTACCTGGTCTGTTTCTGTGTTTTGGATATTTTTGAGAAGGAAGGGGAGGCCTATATATACTGTTGATGTGTTTCAGACTCAAGTTTGTTTGTTCCAGAAAGTGTATAAATATGATTGTTATTAAAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTACCGAGCGT]

[+] EMBL BF936044             [CAAGTCGCCAAGGCCACTTTCCCGTACGTCTGAGCGTACCTTCTTATTGAATAACCAAATGAATCCTAATTATCCTAATGGTCACATAGGATAT GGATGG GAATTTGGTCAAAATGCTACTACTACTTCACGGTGGGAACAACCACAAATTGGATTCTGCTTCGATTCACCAAATCTTCAAATCCCTGAAGTTTGTCCACCTCCCATTCAAAACACCGGGGTTATTGGCTTCGCTTACGATCAGGGGGTAGCAAATCCAGCTTCAGCGTCCTCAGTATCCCCCAATCGTCCACAATCCAACTCATCTACATGCAGCACCTTTAATGTTACACCGTCAAGACCAAATGTTCCCCCACCCATCA AACCCATGCAACCAGAATCATACGTTGATTATTCGAATGAGTCATTTGCACCATCCGCTCCTCCTGAATCCGTTCCCCTTTCTCATAGTGAATCAGTGAAAGTTATTACAATCACTAGGATGGATTCAAAAAAATCCGGCACAACATCTACAACTACTAATACTAATACTAATACTAATCAGCACAATCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD077828             [                                                                                          ATATAGGATGGTGAATTTGGTCAAACTGCTACTACTACTTCACGGTGGGAACAACCACAAATTGGATTCTGCTTCGATTCACCAAATCTTCAAATCCCTGAAGTTTGTCCACCTCCCATTCAAAACACCGGGGTTATTGGCTTCGCTTACGATCAGGGGGTAGCAAATCCAGCTTCAGCGTCCTCAGTATCCCCCAATCGTCCACAATCCAACTCATCTACATGCAGCACCTTTAATGTTACACCGTCAAGACCAAATGTTCCCCCACCCATCANACCCCATGC ACCAGAATCATACGTTGATTATTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD164742             [                                                                                                                                                  ACAAATTGGATTCTGCTTCGATTCACCAAATCTTCAAATCCCTGAAGTTTGTCCACCTCCCATTCAAAACACCGGGGTTATTGGCTTCGCTTACGATCAGGGGGTAGCAAATCCAGCTTCAGCGTCCTCAGTATCCCCCAATCGTCCACAATCCAACTCATCTACATGCAGCACCTTTAATGTTACACCGTCAAGACCAAATGTTCCCCCACCCATCA AACCCATGCAACCAGAATCATACGTTGATTATTCGAATGAGTCATTTGCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD115850             [                                                                                                                                                                                                               gTTCAAAACACCGGGGTTATTGGCTTCGCTTACGGTCAGGGGGTAGCAAATCCAGCTTCAGCGTCCTCAGTATCCCCCAATCGTCCACAATCCAACTCATCTACATGCAGCACCTTTAATGTTACACCGTCAAGACCAAATGTTCCCCCACCCATCA AACCCATGCAACCAGAATCATACGTTGATTATTCGAATGAGTCATTTGCACCATCCGCTCCTCCTGAATCCGTTCCCCTTTCTCATAGTGAATCAGTGAAAGTTATTACAATCACTAGGAAGGATTCAAAAAAATCTGGCACAACATCTACAACTACTAATACTAATACTAATACTAATCAGCACAATCAACGACGTGACAGTTATCAAGATTCACTAAAAGATATGGCTGCTCTTATGACTGATGTAGAATTAACAGATGATATGATCAATGGTATGCGTAAACGTTTCGATTTAAAGAACTGATGACACTAAACTCTTCTTCAATCAATAGTTCGGTTCATATTCCTATCAAATGACTTGAAAAACAAAATTCTCCTATTGAAAGTGTAGATTACTTTCTGTTTATAA AACAATCATCATTTATTTTGCTTCATTTTTTGTTTTACAATGCTnt                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD064223             [                                                                                                                                                                                                                              GTTATTGGCTTCGCTTACGATCAGGGGGTAGCAAATCCAGCTTCAGCGTCCTCAGTATCCCCCAATCGTCCACAATCCAACTCATCTACATGCAGCACCTTTAATGTTACACCGTCAAGACCAAATGTTCCCCCACCCATCA AACCCATGCAACCAGAATCATACGTTGATTATTCGAATGAGTCATTTGCACCATCCGCTCCTCCTGAtg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD092851             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CAGTGAAAGTTATTACAATCACTAGGAT GATTC AAAAAATCCGGCACAACATCTACAACTACTAATACTAATACTAATACTAATCAGCACAATCAACGACGTGACAGTTATCAAGATTCACTAAAAGATATGGCTGCTCTTATGACTGATGTAGAATTAACAGATGATATGATCAATGGTATGCGTATACGTTTCGATTTAAAGAACTGATGACACTAAACTCTTCTTCAATCAATAGTTCGGTTCATATTCCTATCAAATGACTTGAAAAACAAAATTCTCCTATTGAAAGTGTAGGTTACTTTCTGTTTATAATAACAATCATCATTGATTTTGC  C  TTTTTGTTTTACAATGCTGTCACATCAATTAATGTCCATGATAATCCATGATAAAGTTGC TTTTCCCCCTCCCCATCAATTAACTTTGTTTATTTATTTATTTTGTTATTGTTTACCTTGATTATTGATTGTTTATCCTTAGTTTGCCAATAGAGAAATCAAGTATTATGTATTTAATAACATTTTTTTGCTTGTGAAACAAATAGACTGGCGTTTCAACTTGATTCCCAACT                                                                                                                                                                                       ]
[-] EMBL CD111405             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GACAGTTATCAAGATTCACTAAAAGATATGGCTGCTCTTATGACTGATGTAGAATTAACAGATGATATGATCAATGGTATGCGTAAACGTTTCGATTTAAAGAACTGATGACACTAAACTCTTCTTCAATCAATAGTTCGGTTCATATTCCTATCAAATGACTTGAAAAACAAAATTCTCCTATTGAAAGTGTAGATTACTTTCTGTTTATAATAACAATCACCATTGATTTTG   C  TTTTTGTTTTACAATGCTGTCACATCAATTAATGTCCATGATAATCCATGATAAAGTTGC TTTTCCCCCTCCCCATCAATTAACTTTGTTTATTTATTTATTTTGTTATTGTTTACTTTGATTATTGATTGTTTATCCTTAGTTTGCCAATAGAGACATCAAGTATTATGTATTTAATAACATTTTTTTGCTTGTGAAACAAATAGACTGGCGTTTCAACTTGATTCCCAAC                                                                                                                                                                                        ]
[-] EMBL CD111323             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TGAGGTAGAATTAACAGATGATATGATCAATGGTATGCGTAAACGTTTCGATTTAAAGAACTGATGACACTAAACTCTTCTTCAATCAATAGTTCGGTTCATATTCCTATCAAATGACTTGAAAAACAAAATTCTCCTATTGAAAGTGTAGATTACTTTCTGTTTATAATAACAATCATCATTGATTTTG   C  TTTTTGTTTTACAATGCTGTCACATCAATTAATGTCCATGATAATCCATGATAAAGTTGC TTTTCCCCCTCCCCATCAATTAACTTTGTTTATTTATTTATTTTGTTATTGTTTACTTTGATTATTGATTGTTTATCCTTAGTTTGCCAATAGAGACATCAAGTATTATGTATTTAATAACATTTTTTTGCTTGTGAAACAAATAGACTGGCGTTTCAACTTGATTCCCAAC                                                                                                                                                                                        ]
[-] EMBL AI976531             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AGTTCGGTTCATATTCCTATCAAATGACTTGAAAAACAAAATTCTCCTATTGAAAGTGTAGATTACTTTCTGTTTATAATAACAATCATCATTGATTTTGC T   TTTTTGTTTTACAATGCTGTCACATCAATTAATGTCCATGATAATCCATGATAAAGTTGC TTTTCCCCCTCCCCATCAATTAACTTTGTTTATTTATTTATTTTGTTATTGTTTACTTTGATTATTGATTGTTTATCCTTAGTTTGCCAATAGAGAAATCAAGTATTATGTATTTAATAACATTTTTTTGCTTGTGAAACAAATAGACTGGCGTTTCAACTTGATTCCCAACTTTTTCCTACCTGGTCTGTTTCTGTGTTTTGGATATTTTTGAGAAGGAAGGGGAGGCCTATATATACTGTTGATGTGTTTCAGACTCAAGTTTGTTTGTTCCAGAAAGTGTATAAATATGATTGTTATTAAAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTACCGAGCGT]
[-] EMBL AI395028             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            aAAATGACTTGAAAAACCAAATT TCCTATTGAAAGTGTAGA TACTTTCTGTTTATAATAACAATCATCATTGATTCTG  T   TTTTTGTTTTACAATGCTGTCACATCAATTAATGTCCATGATAATCCCTGATAAAGTTGCTTTTTTCGCCTTCCCATCAATTAACTTTGTTTATTTATTTATTTTGTTAATGTTTACCTTGGATAATGAATGGTTATCCTTAGTTTGCCAATTGAGAAATCAAGTATTATGTATTTAATAACATTTTTTTGCTTGTGAAACAAATTGACTGGCGTTTCAACTTGATTCCCAACTTTCTCCTACCTGGTCTGTTTCTGTGTTTTGGATATTTTTGAGAAGGAAGGGGAGGCCTATATATACTGTTGATGTGTTTCAGACTCAAGTTTGTTTGTTCCAGAAAGTGTATAAATATGATTGTTATTATTTAAAAAAAAAAAAAAAAAAAAAAA                            ]


>consensus_10448#0 CAAGTCGCCAAGGCCACTTTCCCGTACGTCTGAGCGTACCTTCTTATTGAATAACCAAAT GAATCCTAATTATCCTAATGGTCACATAGGATATGGATGGGAATTTGGTCAAAATGCTAC TACTACTTCACGGTGGGAACAACCACAAATTGGATTCTGCTTCGATTCACCAAATCTTCA AATCCCTGAAGTTTGTCCACCTCCCATTCAAAACACCGGGGTTATTGGCTTCGCTTACGA TCAGGGGGTAGCAAATCCAGCTTCAGCGTCCTCAGTATCCCCCAATCGTCCACAATCCAA CTCATCTACATGCAGCACCTTTAATGTTACACCGTCAAGACCAAATGTTCCCCCACCCAT CAAACCCATGCAACCAGAATCATACGTTGATTATTCGAATGAGTCATTTGCACCATCCGC TCCTCCTGAATCCGTTCCCCTTTCTCATAGTGAATCAGTGAAAGTTATTACAATCACTAG GATGGATTCAAAAAAATCCGGCACAACATCTACAACTACTAATACTAATACTAATACTAA TCAGCACAATCAACGACGTGACAGTTATCAAGATTCACTAAAAGATATGGCTGCTCTTAT GACTGATGTAGAATTAACAGATGATATGATCAATGGTATGCGTAAACGTTTCGATTTAAA GAACTGATGACACTAAACTCTTCTTCAATCAATAGTTCGGTTCATATTCCTATCAAATGA CTTGAAAAACAAAATTCTCCTATTGAAAGTGTAGATTACTTTCTGTTTATAATAACAATC ATCATTGATTTTGCTCTTTTTGTTTTACAATGCTGTCACATCAATTAATGTCCATGATAA TCCATGATAAAGTTGCTTTTCCCCCTCCCCATCAATTAACTTTGTTTATTTATTTATTTT GTTATTGTTTACTTTGATTATTGATTGTTTATCCTTAGTTTGCCAATAGAGAAATCAAGT ATTATGTATTTAATAACATTTTTTTGCTTGTGAAACAAATAGACTGGCGTTTCAACTTGA TTCCCAACTTTTTCCTACCTGGTCTGTTTCTGTGTTTTGGATATTTTTGAGAAGGAAGGG GAGGCCTATATATACTGTTGATGTGTTTCAGACTCAAGTTTGTTTGTTCCAGAAAGTGTA TAAATATGATTGTTATTAAAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGC ATTACCGAGCGT



consensusID : consensus_10448#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 784
fasta sequence
                              [TCTGGCACGTTGAAGCTGGATTTGCTACCCCCCAATCGTCCACAATCCAACTCATCTACATGCAGCACCTTTAATGTTACACCGTCAAGACCAAATGTTCCCCCACCCATCAAACCCATGCAACCAGAATCATACGTTGATTATTCGAATGAGTCATTTGCACCATCCGCTCCTCCTGAATCCGTTCCCCTTTCTCATAGTGAATCAGTGAAAGTTATTACAATCACTAGGATGGATTCAAAAAAATCCGGCACAACATCTACAACTACTAATACTAATACTAATACTAATCAGCACAATCAAC-GACGTGACAGTTATCAAGATTCACTAAAAGATATGGCTGCTCTTATGA-CTGATGTAGAATTAACAGATGATATGATCAATGGTATGCGTAAACGTTTCGATTTAAAGAACTGATGACACTAAACTCTTCTTCAATCAATAGTTCGGTTCATATTCCTATCAAATGACTTGAAAAACAAAATTCTCCTATTGAAAGTGTAGATTACTTTCTGTTTATAATAACAATCATCATTGATTTTGCTTCTTTGTCTTACAATGCTGTCACATCAATTAATGTCCATGATAATCCATGATAAAGTTGCTTTTCCCCCTCCCCATCAATTAACTTTGTTTATTTATTTATTTTGTTATTGTTTACTTTGATTATTGATTGTTTATCCTTAGTTTGCCAATAGAGAAATCAAGTATTATGTATTTAATAACATTTTTTTGCTTGTGAAACAAATAGACTGGCGTTTCAACTTGAAAAAAAAAAAAAAAA]

[+] EMBL CD115951             [TCTGGCACGTTGAAGCTGGATTTGCTACCCCCCAATCGTCCACAATCCAACTCATCTACATGCAGCACCTTTAATGTTACACCGTCAAGACCAAATGTTCCCCCACCCATCAAACCCATGCAACCAGAATCATACGTTGATTATTCGAATGAGTCATTTGCACCATCCGCTCCTCCTGAATCCGTTCCCCTTTCTCATAGTGAATCAGTGAAAGTTATTACAATCACTAGGATGGATTCAAAAAAATCCGGCACAACATCTACAACTACTAATACTAATACTAATACTAATCAGCACAATCAAC GACGTGACAGTTATCAAGATTCACTAAAAGATATGGCTGCTCTTATGA CTGATGTAGAATTAACAGATGATATGATCAATGGTATGCGTAAACGTTTCGATTTAAAGAACTGATGACACTAAACTCTTCTTCAATCAATAGTTCGGGTCAT                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD083466             [                                                                                          cgaggTGTTCCCCCACCCATCAAACCCATGC ACCAGAATCATACGTTGATTATTCGAATGAGTCATTTGCACCATCCGCTCCTCCTGAATCCGTTCCCCTTTCTCATAGTGAATCAGTGAAAGTTATTACAATCACTAGGATGGATTCAAAAAAATCCGGCACAACATCTACAACTACTAATACTAATACTAATACTAATCAGCACAATCAAC GACGTGACAGTTATCAAGATTCACTAAAAGATATGGCTGCTCTTATGA CTGATGTAGAATTAACAGATGATATGATCAATGGTATGCGTAAACGTTTCGATTTAAAGAACTGATGACACTAAACTCTTCTTCAATCAATAGTTCGGTTCATATTCCTATCAAATGACTTGAAAAACAAAATTCTCCTATTGAAAGTGTAGATTACTTTCTGTTTATAATAACAATCATCATTGATTTTGCTTCTTTGTCTTACAA                                                                                                                                                                                                                                 ]
[+] EMBL CD115501             [                                                                                                                   CCATGCAACCAGAATCATACGTTGATTATTCGAATGACTCATTTGCACCATCCGCTCCTCCTGAATCCGTTCCCCTTTCTCATAGTGAATCAGTGAAAGTCATTACAATCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL AI395145             [                                                                                                                                                                                                                                                                                                           ttAACGGACGTGACAGTTATCAAGATTCACTAAAAGATATGCTTGCTC TATGACCTGATGTAGAATTAACAGATGATATGATCAATGGTATGCGTAAACGTTTCGATTTAAAGAACTGATGACACTAAA TCTTCTTCAATCAATAGTTCGGTTCATATTCCTATCAAATGACTTGAAAAACAAAATTCTCCTATTGAAAGTGTAGATTACTTTCTGTTTATAATAACAATCATCATTGATTTTGCTTTTTTGTTTTACAATGCTGTCACATCAATTAATGTCCATGATAATCCATGATAAAGTTGCTTTTCCCCCTCCCCATCAATTAACTTTGTTTATTTATTTATTTTGTTATTGTTTACTTTGATTATTGATTGTTTATCCTTAGTTTGCCAATAGAGAAATCAAGTATTATGTATTTAATAACATTTTTTTGCTTGTGAAACAAATAGACTGGCGTTTCAACTTGAAAAAAAAAAAAAAAA]


>consensus_10448#1 TCTGGCACGTTGAAGCTGGATTTGCTACCCCCCAATCGTCCACAATCCAACTCATCTACA TGCAGCACCTTTAATGTTACACCGTCAAGACCAAATGTTCCCCCACCCATCAAACCCATG CAACCAGAATCATACGTTGATTATTCGAATGAGTCATTTGCACCATCCGCTCCTCCTGAA TCCGTTCCCCTTTCTCATAGTGAATCAGTGAAAGTTATTACAATCACTAGGATGGATTCA AAAAAATCCGGCACAACATCTACAACTACTAATACTAATACTAATACTAATCAGCACAAT CAACGACGTGACAGTTATCAAGATTCACTAAAAGATATGGCTGCTCTTATGACTGATGTA GAATTAACAGATGATATGATCAATGGTATGCGTAAACGTTTCGATTTAAAGAACTGATGA CACTAAACTCTTCTTCAATCAATAGTTCGGTTCATATTCCTATCAAATGACTTGAAAAAC AAAATTCTCCTATTGAAAGTGTAGATTACTTTCTGTTTATAATAACAATCATCATTGATT TTGCTTCTTTGTCTTACAATGCTGTCACATCAATTAATGTCCATGATAATCCATGATAAA GTTGCTTTTCCCCCTCCCCATCAATTAACTTTGTTTATTTATTTATTTTGTTATTGTTTA CTTTGATTATTGATTGTTTATCCTTAGTTTGCCAATAGAGAAATCAAGTATTATGTATTT AATAACATTTTTTTGCTTGTGAAACAAATAGACTGGCGTTTCAACTTGAAAAAAAAAAAA AAAA



consensusID : consensus_10448#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 447
fasta sequence
                              [CACAAATCAAGGGACGTGACAGTTATCAAAGGTTCACTAAAAAGATATGGCTGCTCTTATGACTTGATGTAGAATTAACAGATGATATGATCAATGGTATGCGTAAACGTTTCGATTTAAAGAACTGATGACACT-AACTCTTCTTCAATCAATAGTTCGGTTCATATTCCTATCAAATGACTTGAAAAACAAAATTCTCCTATTGAAAGTGTAGATTACTTTCTGTTTATAATAACAATCATCATTGATTTTGCTTTTTTGTTTTACAATGCTGTCACATCAATTAATGTCCATGATAATCCATGATAAAGTTGCTTTTCCCCCTCCCCATCAATTAACTTTGTTTATTTATTTATTTTGTTATTGTTTACTTTGATTATTGATTGTTTATCCTTAGTTTGCCAATAGAGAAATCAAGTATTATGTATTTAAAAAAAAAAAAAAAAA]

[-] EMBL AI395468             [CACAAATCAAGGGACGTGACAGTTATCAAAGGTTCACTAAAAAGATATGGCTGCTCTTATGACTTGATGTAGAATTAACAGATGATATGATCAATGGTATGCGTAAACGTTTCGATTTAAAGAACTGATGACACT AACTCTTCTTCAATCAATAGTTCGGTTCATATTCCTATCAAATGACTTGAAAAACAAAATTCTCCTATTGAAAGTGTAGATTACTTTCTGTTTATAATAACAATCATCATTGATTTTGCTTTTTTGTTTTACAATGCTGTCACATCAATTAATGTCCATGATAATCCATGATAAAGTTGCTTTTCCCCCTCCCCATCAATTAACTTTGTTTATTTATTTATTTTGTTATTGTTTACTTTGATTATTGATTGTTTATCCTTAGTTTGCCAATAGAGAAATCAAGTATTATGTATTTAAAAAAAAAAAAAAAAA]
[-] EMBL AI395771             [                                                              acTGATGTAGAATTAACAGATGATATGATCAGTGGTATGCGTAAACGTTTCGATTTAAAGAACTGATGACACTAAACTCTTCTTCAATCAATAGTTCGGTTCATATTCCTATCAAATGACTTGAAAAACAAAATTCTCCTATTGAAAGTGTAGATTACTTTCTGTTTATACTAACAATCATCATTGATTTTGCTATTTTGTTTTACAATGCTGTCACATCAATTAATGTCCATGATAATCCATGATAAAGTTGCTTTTCCCCCTCCCCATCAATTAACTTTGTTTATTTATTTATTGTGTTATTGTTTACCTTGATTATTGATTGTTTATCCTTAGTTTGCCAATAGAGAAATCAAGTATTATGTATTTAAAAAAAAAAAAAAAA ]


>consensus_10448#2 CACAAATCAAGGGACGTGACAGTTATCAAAGGTTCACTAAAAAGATATGGCTGCTCTTAT GACTTGATGTAGAATTAACAGATGATATGATCAATGGTATGCGTAAACGTTTCGATTTAA AGAACTGATGACACTAACTCTTCTTCAATCAATAGTTCGGTTCATATTCCTATCAAATGA CTTGAAAAACAAAATTCTCCTATTGAAAGTGTAGATTACTTTCTGTTTATAATAACAATC ATCATTGATTTTGCTTTTTTGTTTTACAATGCTGTCACATCAATTAATGTCCATGATAAT CCATGATAAAGTTGCTTTTCCCCCTCCCCATCAATTAACTTTGTTTATTTATTTATTTTG TTATTGTTTACTTTGATTATTGATTGTTTATCCTTAGTTTGCCAATAGAGAAATCAAGTA TTATGTATTTAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10448#0      CAAGTCGCCAAGGCCACTTTCCCGTACGTCTGAGCGTACCTTCTTATTGAATAACCAAAT 60
consensus_10448#2      ------------------------------------------------------------
consensus_10448#1      ------------------------------------------------------------
                                                                                   

consensus_10448#0      GAATCCTAATTATCCTAATGGTCACATAGGATATGGATGGGAATTTGGTCAAAATGCTAC 120
consensus_10448#2      ------------------------------------------------------------
consensus_10448#1      ------------------------------------------------------------
                                                                                   

consensus_10448#0      TACTACTTCACGGTGGGAACAACCACAAATTGGATTCTGCTTCGATTCACCAAATCTTCA 180
consensus_10448#2      ------------------------------------------------------------
consensus_10448#1      ------------------------------------------------------------
                                                                                   

consensus_10448#0      AATCCCTGAAGTTTGTCCACCTCCCATTCAAAACACCGGGGTTATTGGCTTCGCTTACGA 240
consensus_10448#2      ------------------------------------------------------------
consensus_10448#1      ------------------------------------------------------------
                                                                                   

consensus_10448#0      TCAGGGGGTAGCAAATCCAGCTTCAGCGTCCTCAGTATCCCCCAATCGTCCACAATCCAA 300
consensus_10448#2      ------------------------------------------------------------
consensus_10448#1      ----------TCTGGCACGTTGAAGCTGGATTTGCTACCCCCCAATCGTCCACAATCCAA 50
                                                                                   

consensus_10448#0      CTCATCTACATGCAGCACCTTTAATGTTACACCGTCAAGACCAAATGTTCCCCCACCCAT 360
consensus_10448#2      ------------------------------------------------------------
consensus_10448#1      CTCATCTACATGCAGCACCTTTAATGTTACACCGTCAAGACCAAATGTTCCCCCACCCAT 110
                                                                                   

consensus_10448#0      CAAACCCATGCAACCAGAATCATACGTTGATTATTCGAATGAGTCATTTGCACCATCCGC 420
consensus_10448#2      ------------------------------------------------------------
consensus_10448#1      CAAACCCATGCAACCAGAATCATACGTTGATTATTCGAATGAGTCATTTGCACCATCCGC 170
                                                                                   

consensus_10448#0      TCCTCCTGAATCCGTTCCCCTTTCTCATAGTGAATCAGTGAAAGTTATTACAATCACTAG 480
consensus_10448#2      ------------------------------------------------------------
consensus_10448#1      TCCTCCTGAATCCGTTCCCCTTTCTCATAGTGAATCAGTGAAAGTTATTACAATCACTAG 230
                                                                                   

consensus_10448#0      GATGGATTCAAAAAAATCCGGCACAACATCTACAACTACTAATACTAATACTAATACTAA 540
consensus_10448#2      ------------------------------------------------------------
consensus_10448#1      GATGGATTCAAAAAAATCCGGCACAACATCTACAACTACTAATACTAATACTAATACTAA 290
                                                                                   

consensus_10448#0      TCAGCACAATCAACGACGTGACAGTTATCAA-GATTCACTAAAA-GATATGGCTGCTCTT 598
consensus_10448#2      --CACAAATCAAGGGACGTGACAGTTATCAAAGGTTCACTAAAAAGATATGGCTGCTCTT 58
consensus_10448#1      TCAGCACAATCAACGACGTGACAGTTATCAA-GATTCACTAAAA-GATATGGCTGCTCTT 348
                           ** *   *  ***************** * ********** ***************

consensus_10448#0      ATGACT-GATGTAGAATTAACAGATGATATGATCAATGGTATGCGTAAACGTTTCGATTT 657
consensus_10448#2      ATGACTTGATGTAGAATTAACAGATGATATGATCAATGGTATGCGTAAACGTTTCGATTT 118
consensus_10448#1      ATGACT-GATGTAGAATTAACAGATGATATGATCAATGGTATGCGTAAACGTTTCGATTT 407
                       ****** *****************************************************

consensus_10448#0      AAAGAACTGATGACACTAAACTCTTCTTCAATCAATAGTTCGGTTCATATTCCTATCAAA 717
consensus_10448#2      AAAGAACTGATGACACTAA-CTCTTCTTCAATCAATAGTTCGGTTCATATTCCTATCAAA 177
consensus_10448#1      AAAGAACTGATGACACTAAACTCTTCTTCAATCAATAGTTCGGTTCATATTCCTATCAAA 467
                       ******************* ****************************************

consensus_10448#0      TGACTTGAAAAACAAAATTCTCCTATTGAAAGTGTAGATTACTTTCTGTTTATAATAACA 777
consensus_10448#2      TGACTTGAAAAACAAAATTCTCCTATTGAAAGTGTAGATTACTTTCTGTTTATAATAACA 237
consensus_10448#1      TGACTTGAAAAACAAAATTCTCCTATTGAAAGTGTAGATTACTTTCTGTTTATAATAACA 527
                       ************************************************************

consensus_10448#0      ATCATCATTGATTTTGCTCTTTTTGTTTTACAATGCTGTCACATCAATTAATGTCCATGA 837
consensus_10448#2      ATCATCATTGATTTTGCT-TTTTTGTTTTACAATGCTGTCACATCAATTAATGTCCATGA 296
consensus_10448#1      ATCATCATTGATTTTGCT-TCTTTGTCTTACAATGCTGTCACATCAATTAATGTCCATGA 586
                       ****************** * ***** *********************************

consensus_10448#0      TAATCCATGATAAAGTTGCTTTTCCCCCTCCCCATCAATTAACTTTGTTTATTTATTTAT 897
consensus_10448#2      TAATCCATGATAAAGTTGCTTTTCCCCCTCCCCATCAATTAACTTTGTTTATTTATTTAT 356
consensus_10448#1      TAATCCATGATAAAGTTGCTTTTCCCCCTCCCCATCAATTAACTTTGTTTATTTATTTAT 646
                       ************************************************************

consensus_10448#0      TTTGTTATTGTTTACTTTGATTATTGATTGTTTATCCTTAGTTTGCCAATAGAGAAATCA 957
consensus_10448#2      TTTGTTATTGTTTACTTTGATTATTGATTGTTTATCCTTAGTTTGCCAATAGAGAAATCA 416
consensus_10448#1      TTTGTTATTGTTTACTTTGATTATTGATTGTTTATCCTTAGTTTGCCAATAGAGAAATCA 706
                       ************************************************************

consensus_10448#0      AGTATTATGTATTTAATAACATTTTTTTGCTTGTGAAACAAATAGACTGGCGTTTCAACT 1017
consensus_10448#2      AGTATTATGTATTTAAAAAAA-----------AAAAAAAAAA------------------ 447
consensus_10448#1      AGTATTATGTATTTAATAACATTTTTTTGCTTGTGAAACAAATAGACTGGCGTTTCAACT 766
                       **************** ** *              *** ***                  

consensus_10448#0      TGATTCCCAACTTTTTCCTACCTGGTCTGTTTCTGTGTTTTGGATATTTTTGAGAAGGAA 1077
consensus_10448#2      ------------------------------------------------------------
consensus_10448#1      TGAAAAAAAAAAAAAAAA------------------------------------------ 784
                                                                                   

consensus_10448#0      GGGGAGGCCTATATATACTGTTGATGTGTTTCAGACTCAAGTTTGTTTGTTCCAGAAAGT 1137
consensus_10448#2      ------------------------------------------------------------
consensus_10448#1      ------------------------------------------------------------
                                                                                   

consensus_10448#0      GTATAAATATGATTGTTATTAAAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAGC 1197
consensus_10448#2      ------------------------------------------------------------
consensus_10448#1      ------------------------------------------------------------
                                                                                   

consensus_10448#0      TGCATTACCGAGCGT 1212
consensus_10448#2      ---------------
consensus_10448#1      ---------------
                                      




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)